View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3892_low_56 (Length: 345)

Name: NF3892_low_56
Description: NF3892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3892_low_56
NF3892_low_56
[»] chr1 (89 HSPs)
chr1 (89-203)||(50290008-50290122)
chr1 (102-203)||(39268553-39268653)
chr1 (138-205)||(52311410-52311477)
chr1 (138-203)||(4892668-4892733)
chr1 (138-203)||(5427549-5427614)
chr1 (138-203)||(29185754-29185819)
chr1 (138-203)||(33362271-33362336)
chr1 (138-203)||(45914319-45914384)
chr1 (138-202)||(1827679-1827743)
chr1 (138-202)||(19321053-19321117)
chr1 (138-202)||(22198000-22198064)
chr1 (138-202)||(28572377-28572441)
chr1 (138-202)||(33074751-33074815)
chr1 (138-202)||(38896049-38896113)
chr1 (138-202)||(46624115-46624179)
chr1 (140-202)||(50278162-50278224)
chr1 (138-203)||(16301516-16301581)
chr1 (102-198)||(39268658-39268754)
chr1 (140-203)||(50289830-50289893)
chr1 (138-200)||(1827055-1827117)
chr1 (138-200)||(28571003-28571065)
chr1 (138-200)||(33075383-33075445)
chr1 (138-203)||(28947261-28947326)
chr1 (220-337)||(39268584-39268696)
chr1 (138-203)||(43991497-43991562)
chr1 (138-203)||(47137091-47137156)
chr1 (12-73)||(50289952-50290013)
chr1 (138-202)||(28571634-28571698)
chr1 (144-207)||(21008020-21008083)
chr1 (102-169)||(50562717-50562784)
chr1 (138-200)||(5426930-5426992)
chr1 (138-200)||(22198632-22198694)
chr1 (138-203)||(50562631-50562696)
chr1 (89-145)||(28947091-28947147)
chr1 (12-71)||(1827561-1827620)
chr1 (12-71)||(19321176-19321235)
chr1 (138-200)||(4892038-4892100)
chr1 (138-200)||(16300997-16301059)
chr1 (138-200)||(29186387-29186449)
chr1 (138-200)||(33361641-33361703)
chr1 (12-78)||(50278283-50278349)
chr1 (267-325)||(50562727-50562785)
chr1 (138-200)||(51965094-51965156)
chr1 (12-73)||(28946789-28946850)
chr1 (150-203)||(32575574-32575627)
chr1 (12-65)||(46624238-46624291)
chr1 (219-263)||(4892668-4892712)
chr1 (219-263)||(5427549-5427593)
chr1 (219-263)||(29185775-29185819)
chr1 (219-263)||(33362271-33362315)
chr1 (219-263)||(39268553-39268597)
chr1 (219-263)||(45914319-45914363)
chr1 (219-263)||(47137091-47137135)
chr1 (219-263)||(50289849-50289893)
chr1 (219-263)||(50290078-50290122)
chr1 (138-198)||(50562004-50562064)
chr1 (219-263)||(52311412-52311456)
chr1 (219-262)||(1827679-1827722)
chr1 (12-71)||(5427429-5427488)
chr1 (219-262)||(19321074-19321117)
chr1 (219-262)||(22198021-22198064)
chr1 (20-71)||(22198130-22198181)
chr1 (12-71)||(28572259-28572318)
chr1 (219-262)||(28572377-28572420)
chr1 (164-203)||(28946913-28946952)
chr1 (219-262)||(33074772-33074815)
chr1 (20-71)||(33074881-33074932)
chr1 (12-71)||(38895926-38895985)
chr1 (219-262)||(38896049-38896092)
chr1 (219-262)||(46624136-46624179)
chr1 (219-262)||(50278181-50278224)
chr1 (12-71)||(52311295-52311354)
chr1 (12-78)||(28947137-28947203)
chr1 (138-200)||(52310789-52310851)
chr1 (221-262)||(28571634-28571675)
chr1 (226-263)||(28946913-28946950)
chr1 (219-263)||(16301516-16301560)
chr1 (12-71)||(4892551-4892610)
chr1 (155-198)||(8998523-8998566)
chr1 (12-71)||(29185877-29185936)
chr1 (12-71)||(33362154-33362213)
chr1 (14-71)||(16301399-16301456)
chr1 (261-306)||(28947146-28947191)
chr1 (12-73)||(45914200-45914261)
chr1 (227-263)||(21008024-21008060)
chr1 (20-64)||(28571523-28571567)
chr1 (260-308)||(28946963-28947011)
chr1 (219-263)||(43991518-43991562)
chr1 (23-71)||(47136975-47137023)
[»] chr5 (124 HSPs)
chr5 (89-203)||(3890757-3890871)
chr5 (102-203)||(19121588-19121689)
chr5 (89-203)||(3890985-3891098)
chr5 (102-203)||(5398862-5398963)
chr5 (102-203)||(42691936-42692037)
chr5 (89-203)||(42692078-42692191)
chr5 (138-203)||(12418903-12418968)
chr5 (138-203)||(2182076-2182141)
chr5 (138-203)||(25696171-25696236)
chr5 (138-203)||(33705388-33705453)
chr5 (138-203)||(34718158-34718223)
chr5 (138-203)||(34726003-34726068)
chr5 (138-203)||(41691842-41691907)
chr5 (138-202)||(752816-752880)
chr5 (138-202)||(17637436-17637500)
chr5 (138-202)||(26601298-26601362)
chr5 (138-202)||(36885529-36885593)
chr5 (138-202)||(42976029-42976093)
chr5 (138-202)||(43137021-43137085)
chr5 (138-203)||(18241843-18241908)
chr5 (138-203)||(25480869-25480934)
chr5 (138-203)||(30180657-30180722)
chr5 (138-203)||(35393116-35393180)
chr5 (138-202)||(6304553-6304617)
chr5 (138-202)||(43137653-43137717)
chr5 (138-201)||(3890579-3890642)
chr5 (144-203)||(25480523-25480582)
chr5 (138-200)||(754192-754254)
chr5 (138-200)||(6305186-6305248)
chr5 (141-203)||(41290296-41290357)
chr5 (138-200)||(43138286-43138348)
chr5 (138-203)||(35393742-35393806)
chr5 (138-203)||(39914542-39914607)
chr5 (138-203)||(42692305-42692370)
chr5 (138-202)||(753559-753623)
chr5 (102-190)||(5398769-5398856)
chr5 (89-203)||(25480653-25480755)
chr5 (138-202)||(42976653-42976717)
chr5 (144-203)||(41290422-41290481)
chr5 (138-200)||(26601935-26601997)
chr5 (114-191)||(29379256-29379334)
chr5 (259-332)||(42691972-42692046)
chr5 (153-198)||(22740699-22740744)
chr5 (154-202)||(3087181-3087229)
chr5 (12-71)||(3087287-3087346)
chr5 (12-71)||(17637559-17637618)
chr5 (12-71)||(26601421-26601480)
chr5 (12-71)||(36885651-36885710)
chr5 (12-71)||(42976152-42976211)
chr5 (138-200)||(12419825-12419887)
chr5 (138-200)||(33706019-33706080)
chr5 (138-200)||(34717528-34717590)
chr5 (138-200)||(34726643-34726705)
chr5 (12-78)||(39914417-39914483)
chr5 (138-200)||(41691214-41691276)
chr5 (150-203)||(18241657-18241710)
chr5 (219-263)||(19121588-19121632)
chr5 (219-263)||(25480523-25480567)
chr5 (219-263)||(25480869-25480913)
chr5 (219-263)||(33705409-33705453)
chr5 (219-263)||(34718158-34718202)
chr5 (219-263)||(34726024-34726068)
chr5 (155-203)||(35392901-35392949)
chr5 (219-263)||(35393116-35393160)
chr5 (219-263)||(35393742-35393786)
chr5 (219-263)||(41691842-41691886)
chr5 (219-262)||(752837-752880)
chr5 (12-71)||(752939-752998)
chr5 (219-262)||(17637457-17637500)
chr5 (261-308)||(18241725-18241772)
chr5 (219-262)||(26601319-26601362)
chr5 (219-262)||(36885550-36885593)
chr5 (219-262)||(42976050-42976093)
chr5 (219-262)||(43137042-43137085)
chr5 (12-71)||(43137144-43137203)
chr5 (260-337)||(19121619-19121697)
chr5 (12-82)||(25480396-25480466)
chr5 (138-200)||(25696802-25696864)
chr5 (221-263)||(41290439-41290481)
chr5 (221-262)||(753582-753623)
chr5 (226-263)||(2182076-2182113)
chr5 (261-337)||(5398855-5398932)
chr5 (221-262)||(6304576-6304617)
chr5 (226-263)||(25480653-25480690)
chr5 (261-306)||(25480754-25480799)
chr5 (226-263)||(42692305-42692342)
chr5 (221-262)||(43137676-43137717)
chr5 (23-71)||(2181960-2182008)
chr5 (226-262)||(3087193-3087229)
chr5 (219-263)||(3890827-3890871)
chr5 (219-263)||(5398919-5398963)
chr5 (219-263)||(12418903-12418947)
chr5 (219-263)||(25696192-25696236)
chr5 (219-263)||(30180657-30180701)
chr5 (227-263)||(35392901-35392937)
chr5 (89-141)||(39914375-39914427)
chr5 (227-263)||(39914542-39914578)
chr5 (219-263)||(41290313-41290357)
chr5 (267-337)||(3890769-3890840)
chr5 (220-263)||(18241657-18241700)
chr5 (219-258)||(22740705-22740744)
chr5 (12-71)||(34718041-34718100)
chr5 (12-71)||(34726129-34726188)
chr5 (12-71)||(41691725-41691784)
chr5 (12-71)||(42976774-42976833)
chr5 (267-325)||(3890997-3891055)
chr5 (12-78)||(3891156-3891222)
chr5 (221-263)||(18241843-18241885)
chr5 (12-78)||(25480745-25480811)
chr5 (287-325)||(29379263-29379301)
chr5 (12-78)||(42691813-42691879)
chr5 (226-263)||(3891061-3891098)
chr5 (12-73)||(19121756-19121817)
chr5 (261-306)||(25480409-25480454)
chr5 (219-260)||(34717528-34717569)
chr5 (12-73)||(35392996-35393057)
chr5 (226-263)||(42692078-42692115)
chr5 (261-306)||(42976786-42976831)
chr5 (20-64)||(753690-753734)
chr5 (12-64)||(3890929-3890981)
chr5 (20-64)||(6304684-6304728)
chr5 (142-190)||(30180037-30180085)
chr5 (23-71)||(30180540-30180588)
chr5 (20-64)||(43137784-43137828)
[»] chr7 (106 HSPs)
chr7 (89-202)||(40107650-40107763)
chr7 (102-203)||(20077756-20077857)
chr7 (102-203)||(728541-728642)
chr7 (89-203)||(40241386-40241501)
chr7 (138-203)||(31897442-31897507)
chr7 (138-203)||(36158460-36158525)
chr7 (138-203)||(9150874-9150939)
chr7 (138-203)||(17171594-17171659)
chr7 (138-203)||(27733697-27733762)
chr7 (138-203)||(33637402-33637467)
chr7 (138-203)||(49144777-49144842)
chr7 (138-202)||(24683037-24683101)
chr7 (138-202)||(29468676-29468740)
chr7 (89-203)||(32201276-32201389)
chr7 (138-203)||(4849682-4849747)
chr7 (138-203)||(20077436-20077501)
chr7 (138-203)||(39648601-39648666)
chr7 (138-202)||(7855714-7855778)
chr7 (138-202)||(24683767-24683831)
chr7 (138-202)||(34873047-34873111)
chr7 (138-203)||(690514-690579)
chr7 (154-203)||(12409572-12409621)
chr7 (89-203)||(36158639-36158741)
chr7 (138-202)||(35156121-35156185)
chr7 (144-203)||(26454963-26455022)
chr7 (138-200)||(24684400-24684462)
chr7 (138-200)||(27734301-27734363)
chr7 (138-200)||(29468046-29468108)
chr7 (138-196)||(32201102-32201160)
chr7 (150-203)||(24396749-24396802)
chr7 (138-203)||(40107471-40107535)
chr7 (138-194)||(12409308-12409364)
chr7 (89-203)||(20077615-20077717)
chr7 (18-78)||(20077920-20077980)
chr7 (219-263)||(26454978-26455022)
chr7 (11-71)||(34872929-34872989)
chr7 (12-71)||(7855836-7855895)
chr7 (144-203)||(12409401-12409460)
chr7 (15-78)||(24396625-24396688)
chr7 (144-203)||(39704179-39704238)
chr7 (267-337)||(40107662-40107733)
chr7 (139-202)||(44805813-44805876)
chr7 (138-200)||(9150276-9150338)
chr7 (138-200)||(17170964-17171026)
chr7 (138-200)||(33637924-33637986)
chr7 (133-203)||(38029350-38029420)
chr7 (12-78)||(39704056-39704122)
chr7 (138-200)||(48528044-48528106)
chr7 (219-263)||(4849682-4849726)
chr7 (219-263)||(9150874-9150918)
chr7 (219-263)||(12409577-12409621)
chr7 (219-263)||(17171594-17171638)
chr7 (259-323)||(20077747-20077811)
chr7 (219-263)||(27733718-27733762)
chr7 (219-263)||(31897463-31897507)
chr7 (219-263)||(33637423-33637467)
chr7 (219-263)||(36158481-36158525)
chr7 (13-73)||(40107595-40107655)
chr7 (219-263)||(49144798-49144842)
chr7 (266-325)||(728539-728598)
chr7 (144-203)||(728744-728803)
chr7 (219-262)||(24683058-24683101)
chr7 (12-71)||(24683160-24683219)
chr7 (20-71)||(29468559-29468610)
chr7 (219-262)||(29468676-29468719)
chr7 (12-71)||(35156244-35156303)
chr7 (219-262)||(40107720-40107763)
chr7 (12-71)||(44805695-44805754)
chr7 (221-263)||(728600-728642)
chr7 (138-200)||(31898075-31898137)
chr7 (12-78)||(32201577-32201643)
chr7 (12-78)||(36158583-36158649)
chr7 (142-200)||(39649238-39649296)
chr7 (138-200)||(49145542-49145604)
chr7 (221-262)||(24683790-24683831)
chr7 (221-262)||(34873047-34873088)
chr7 (226-263)||(36158704-36158741)
chr7 (261-306)||(38029493-38029538)
chr7 (226-263)||(40107498-40107535)
chr7 (138-186)||(4849065-4849113)
chr7 (226-262)||(7855742-7855778)
chr7 (219-263)||(20077457-20077501)
chr7 (219-263)||(24396749-24396793)
chr7 (167-203)||(29322453-29322489)
chr7 (227-263)||(29322453-29322489)
chr7 (219-263)||(39648622-39648666)
chr7 (219-263)||(39704179-39704223)
chr7 (12-71)||(17171477-17171536)
chr7 (228-263)||(20077682-20077717)
chr7 (102-145)||(32201434-32201477)
chr7 (12-71)||(33637524-33637583)
chr7 (221-263)||(690514-690556)
chr7 (144-182)||(728498-728536)
chr7 (12-78)||(20077559-20077625)
chr7 (221-263)||(20077815-20077857)
chr7 (258-308)||(32201424-32201474)
chr7 (226-263)||(12409423-12409460)
chr7 (12-73)||(32201220-32201281)
chr7 (219-263)||(728759-728803)
chr7 (138-174)||(21670430-21670466)
chr7 (20-64)||(24683898-24683942)
chr7 (102-154)||(29322526-29322578)
chr7 (226-262)||(35156149-35156185)
chr7 (138-174)||(39277015-39277051)
chr7 (23-71)||(39648735-39648783)
chr7 (219-263)||(40241457-40241501)
[»] scaffold0044 (8 HSPs)
scaffold0044 (102-203)||(87514-87615)
scaffold0044 (138-203)||(87185-87250)
scaffold0044 (89-201)||(87363-87474)
scaffold0044 (259-337)||(87505-87584)
scaffold0044 (219-263)||(87571-87615)
scaffold0044 (219-263)||(87206-87250)
scaffold0044 (226-261)||(87439-87474)
scaffold0044 (266-302)||(87324-87360)
[»] scaffold0318 (2 HSPs)
scaffold0318 (108-203)||(6588-6682)
scaffold0318 (219-263)||(6638-6682)
[»] scaffold1155 (6 HSPs)
scaffold1155 (102-203)||(380-481)
scaffold1155 (268-325)||(424-481)
scaffold1155 (226-263)||(380-417)
scaffold1155 (144-208)||(1255-1318)
scaffold1155 (23-78)||(253-308)
scaffold1155 (261-306)||(262-307)
[»] scaffold0345 (6 HSPs)
scaffold0345 (102-203)||(9736-9837)
scaffold0345 (268-325)||(9736-9793)
scaffold0345 (226-263)||(9800-9837)
scaffold0345 (144-208)||(8898-8961)
scaffold0345 (23-78)||(9909-9964)
scaffold0345 (261-306)||(9910-9955)
[»] scaffold0105 (6 HSPs)
scaffold0105 (102-203)||(29143-29244)
scaffold0105 (268-325)||(29187-29244)
scaffold0105 (226-263)||(29143-29180)
scaffold0105 (144-208)||(30018-30081)
scaffold0105 (23-78)||(29016-29071)
scaffold0105 (261-306)||(29025-29070)
[»] chr6 (51 HSPs)
chr6 (102-203)||(19989231-19989332)
chr6 (102-203)||(33007505-33007606)
chr6 (138-203)||(1221088-1221153)
chr6 (138-203)||(4109286-4109351)
chr6 (138-203)||(24446495-24446560)
chr6 (110-196)||(14366189-14366275)
chr6 (138-203)||(35159465-35159530)
chr6 (144-203)||(33004420-33004479)
chr6 (138-200)||(4897222-4897284)
chr6 (138-202)||(4896590-4896654)
chr6 (152-203)||(19989587-19989638)
chr6 (138-200)||(33320701-33320763)
chr6 (138-200)||(35158901-35158963)
chr6 (150-203)||(14366322-14366375)
chr6 (138-203)||(21078193-21078258)
chr6 (138-203)||(33320179-33320244)
chr6 (144-203)||(19987932-19987990)
chr6 (138-200)||(1220458-1220520)
chr6 (138-200)||(4108656-4108718)
chr6 (138-200)||(9979348-9979410)
chr6 (138-200)||(14832414-14832476)
chr6 (260-337)||(19989262-19989340)
chr6 (138-203)||(21055077-21055145)
chr6 (138-200)||(24445865-24445927)
chr6 (261-337)||(33007536-33007613)
chr6 (219-263)||(1221088-1221132)
chr6 (219-263)||(4109286-4109330)
chr6 (14-78)||(19989108-19989172)
chr6 (219-263)||(19989587-19989631)
chr6 (219-263)||(24446495-24446539)
chr6 (219-263)||(33004420-33004464)
chr6 (219-263)||(33007505-33007549)
chr6 (20-71)||(4896720-4896771)
chr6 (12-71)||(35159303-35159362)
chr6 (260-337)||(14366213-14366291)
chr6 (221-263)||(35159465-35159507)
chr6 (226-263)||(19987932-19987969)
chr6 (227-263)||(14366322-14366358)
chr6 (219-263)||(19989231-19989275)
chr6 (89-145)||(19989417-19989473)
chr6 (12-71)||(1220971-1221030)
chr6 (12-71)||(4109170-4109229)
chr6 (227-262)||(4896619-4896654)
chr6 (12-71)||(21054960-21055019)
chr6 (12-71)||(24446378-24446437)
chr6 (12-71)||(33320302-33320361)
chr6 (267-310)||(35159346-35159389)
chr6 (12-78)||(19989463-19989529)
chr6 (154-203)||(19989371-19989420)
chr6 (227-263)||(21078193-21078229)
chr6 (278-310)||(33320286-33320318)
[»] chr4 (145 HSPs)
chr4 (107-203)||(49750599-49750695)
chr4 (102-203)||(54094587-54094688)
chr4 (89-203)||(49750735-49750848)
chr4 (102-203)||(54093202-54093303)
chr4 (138-203)||(9061242-9061307)
chr4 (138-203)||(39714129-39714194)
chr4 (102-203)||(40682434-40682534)
chr4 (110-203)||(54094187-54094280)
chr4 (138-202)||(39405346-39405410)
chr4 (138-202)||(50118700-50118764)
chr4 (133-203)||(4875737-4875807)
chr4 (138-203)||(2117425-2117490)
chr4 (138-203)||(47556056-47556121)
chr4 (138-203)||(52801592-52801657)
chr4 (138-202)||(3758618-3758682)
chr4 (138-202)||(8988432-8988496)
chr4 (138-202)||(20590297-20590361)
chr4 (139-203)||(22454166-22454230)
chr4 (138-202)||(24947383-24947447)
chr4 (138-202)||(29713283-29713347)
chr4 (138-202)||(37351332-37351396)
chr4 (138-202)||(43022739-43022803)
chr4 (102-205)||(54093083-54093186)
chr4 (138-203)||(49750962-49751027)
chr4 (102-203)||(54095238-54095339)
chr4 (138-202)||(8987800-8987864)
chr4 (138-202)||(24944667-24944731)
chr4 (138-202)||(37350700-37350764)
chr4 (138-202)||(43023256-43023320)
chr4 (143-203)||(48809057-48809117)
chr4 (107-203)||(54094470-54094566)
chr4 (144-203)||(54094987-54095046)
chr4 (138-200)||(8987169-8987231)
chr4 (138-200)||(29712667-29712729)
chr4 (138-200)||(43022187-43022249)
chr4 (138-200)||(50033924-50033986)
chr4 (138-203)||(5754821-5754886)
chr4 (138-203)||(49357575-49357640)
chr4 (138-200)||(2116794-2116856)
chr4 (138-200)||(17741010-17741072)
chr4 (138-200)||(37350069-37350131)
chr4 (138-191)||(8531562-8531615)
chr4 (150-203)||(23632871-23632924)
chr4 (138-202)||(24548653-24548715)
chr4 (138-203)||(46420360-46420425)
chr4 (138-202)||(9888026-9888090)
chr4 (89-203)||(22454344-22454446)
chr4 (12-71)||(3758500-3758559)
chr4 (12-71)||(20590179-20590238)
chr4 (12-71)||(24947506-24947565)
chr4 (12-71)||(43023136-43023195)
chr4 (12-71)||(50118823-50118882)
chr4 (144-203)||(54093319-54093378)
chr4 (144-203)||(54094304-54094362)
chr4 (144-203)||(54094704-54094763)
chr4 (138-200)||(9888659-9888721)
chr4 (138-200)||(12682064-12682126)
chr4 (138-200)||(24948016-24948078)
chr4 (138-200)||(39714806-39714868)
chr4 (12-78)||(42350964-42351030)
chr4 (138-200)||(47556687-47556749)
chr4 (138-200)||(52800962-52801024)
chr4 (102-204)||(54094870-54094971)
chr4 (268-337)||(54095269-54095339)
chr4 (138-203)||(42350842-42350907)
chr4 (219-263)||(2117425-2117469)
chr4 (219-263)||(5754821-5754865)
chr4 (219-263)||(9061263-9061307)
chr4 (219-263)||(22454186-22454230)
chr4 (219-263)||(39714150-39714194)
chr4 (219-263)||(47556077-47556121)
chr4 (219-263)||(49750599-49750643)
chr4 (219-263)||(52801592-52801636)
chr4 (219-263)||(54094187-54094231)
chr4 (219-263)||(54094587-54094631)
chr4 (219-263)||(54094987-54095031)
chr4 (12-71)||(2117307-2117366)
chr4 (219-262)||(3758618-3758661)
chr4 (23-78)||(4875614-4875669)
chr4 (12-71)||(8988314-8988373)
chr4 (219-262)||(8988432-8988475)
chr4 (219-262)||(20590297-20590340)
chr4 (219-262)||(24947404-24947447)
chr4 (20-71)||(29713166-29713217)
chr4 (219-262)||(29713283-29713326)
chr4 (12-71)||(37351214-37351273)
chr4 (219-262)||(37351332-37351375)
chr4 (219-262)||(39405367-39405410)
chr4 (266-325)||(40682477-40682536)
chr4 (12-71)||(43022620-43022679)
chr4 (219-262)||(43022739-43022782)
chr4 (12-71)||(47556179-47556238)
chr4 (220-263)||(49750962-49751005)
chr4 (219-262)||(50118721-50118764)
chr4 (220-337)||(54093233-54093362)
chr4 (261-308)||(54093369-54093416)
chr4 (220-337)||(54094618-54094747)
chr4 (220-262)||(43023256-43023298)
chr4 (138-200)||(46104869-46104931)
chr4 (138-184)||(46105675-46105721)
chr4 (12-78)||(48809175-48809241)
chr4 (12-78)||(49357697-49357763)
chr4 (144-202)||(54095094-54095152)
chr4 (226-263)||(4875737-4875774)
chr4 (221-262)||(8987800-8987841)
chr4 (226-263)||(22454409-22454446)
chr4 (221-262)||(37350700-37350741)
chr4 (12-65)||(39405469-39405522)
chr4 (226-263)||(54094470-54094507)
chr4 (267-308)||(54095143-54095184)
chr4 (10-66)||(23632979-23633035)
chr4 (226-262)||(24548653-24548689)
chr4 (227-263)||(48809081-48809117)
chr4 (219-263)||(54093202-54093246)
chr4 (20-71)||(8987682-8987733)
chr4 (144-203)||(23633031-23633090)
chr4 (102-145)||(24539019-24539062)
chr4 (20-71)||(24548535-24548586)
chr4 (219-262)||(24944688-24944731)
chr4 (12-71)||(24944790-24944849)
chr4 (138-189)||(39405966-39406016)
chr4 (12-71)||(39714297-39714356)
chr4 (271-337)||(49750630-49750697)
chr4 (12-71)||(52801475-52801534)
chr4 (12-78)||(23633149-23633215)
chr4 (12-66)||(39714252-39714306)
chr4 (12-78)||(49750475-49750541)
chr4 (12-66)||(49750850-49750904)
chr4 (225-263)||(54094304-54094342)
chr4 (220-262)||(54095094-54095136)
chr4 (221-262)||(9888049-9888090)
chr4 (261-306)||(22454300-22454345)
chr4 (226-263)||(23632887-23632924)
chr4 (226-263)||(24539072-24539108)
chr4 (12-73)||(40682316-40682377)
chr4 (226-263)||(42350870-42350907)
chr4 (230-263)||(46105499-46105532)
chr4 (170-203)||(46105499-46105532)
chr4 (226-263)||(46420388-46420425)
chr4 (261-306)||(49357709-49357754)
chr4 (20-64)||(9888157-9888201)
chr4 (266-306)||(23633166-23633206)
chr4 (20-64)||(37350589-37350633)
chr4 (266-337)||(54094218-54094290)
chr4 (14-66)||(54094358-54094410)
[»] scaffold0210 (5 HSPs)
scaffold0210 (102-203)||(17522-17623)
scaffold0210 (113-203)||(17365-17455)
scaffold0210 (219-263)||(17411-17455)
scaffold0210 (219-263)||(17579-17623)
scaffold0210 (266-317)||(17520-17571)
[»] chr8 (98 HSPs)
chr8 (102-203)||(27854070-27854171)
chr8 (138-203)||(4465097-4465162)
chr8 (138-203)||(41157879-41157944)
chr8 (138-203)||(41532460-41532525)
chr8 (138-202)||(1944420-1944484)
chr8 (138-202)||(8161164-8161228)
chr8 (138-202)||(8762244-8762308)
chr8 (138-202)||(9473468-9473532)
chr8 (138-202)||(25834744-25834808)
chr8 (138-202)||(32845807-32845871)
chr8 (138-202)||(36777824-36777888)
chr8 (138-203)||(44381413-44381478)
chr8 (138-202)||(1943677-1943741)
chr8 (139-203)||(7390551-7390615)
chr8 (138-202)||(8761612-8761676)
chr8 (138-202)||(25835376-25835440)
chr8 (138-202)||(32845064-32845128)
chr8 (139-198)||(28528742-28528801)
chr8 (138-200)||(8760981-8761043)
chr8 (138-200)||(25836009-25836071)
chr8 (138-200)||(32844431-32844493)
chr8 (138-203)||(12761467-12761532)
chr8 (138-203)||(25619403-25619468)
chr8 (138-203)||(34893332-34893397)
chr8 (138-202)||(8161888-8161952)
chr8 (138-202)||(32846440-32846504)
chr8 (138-200)||(1943046-1943108)
chr8 (138-200)||(4465731-4465793)
chr8 (138-200)||(8162521-8162583)
chr8 (138-200)||(24254791-24254852)
chr8 (138-200)||(41157260-41157322)
chr8 (138-200)||(41533093-41533155)
chr8 (138-200)||(41978192-41978254)
chr8 (138-200)||(44382034-44382096)
chr8 (138-203)||(24250447-24250511)
chr8 (121-198)||(28528204-28528281)
chr8 (89-145)||(24254974-24255030)
chr8 (138-198)||(28528907-28528967)
chr8 (12-71)||(12761350-12761409)
chr8 (144-203)||(15096886-15096945)
chr8 (135-198)||(28528036-28528099)
chr8 (135-198)||(28528402-28528465)
chr8 (138-200)||(25345231-25345293)
chr8 (138-200)||(25620040-25620102)
chr8 (12-78)||(34893208-34893274)
chr8 (226-263)||(34893332-34893369)
chr8 (219-263)||(4465118-4465162)
chr8 (150-198)||(28527880-28527928)
chr8 (219-263)||(41157879-41157923)
chr8 (12-71)||(1944302-1944361)
chr8 (219-262)||(1944420-1944463)
chr8 (12-71)||(4465221-4465280)
chr8 (219-262)||(8161185-8161228)
chr8 (12-71)||(8762126-8762185)
chr8 (219-262)||(8762244-8762287)
chr8 (12-71)||(9473350-9473409)
chr8 (219-262)||(9473468-9473511)
chr8 (219-262)||(25834765-25834808)
chr8 (12-71)||(25834867-25834926)
chr8 (139-198)||(28527713-28527772)
chr8 (12-71)||(32845689-32845748)
chr8 (219-262)||(32845807-32845850)
chr8 (12-71)||(36777706-36777765)
chr8 (219-262)||(36777824-36777867)
chr8 (12-71)||(41157762-41157821)
chr8 (12-71)||(41532583-41532642)
chr8 (12-78)||(24254918-24254984)
chr8 (138-200)||(25615767-25615829)
chr8 (12-78)||(27853947-27854013)
chr8 (140-198)||(28528577-28528634)
chr8 (221-262)||(1943677-1943718)
chr8 (221-262)||(8761612-8761653)
chr8 (226-263)||(12761467-12761504)
chr8 (226-263)||(15096886-15096923)
chr8 (166-203)||(24255039-24255076)
chr8 (226-263)||(24255039-24255076)
chr8 (221-262)||(25835399-25835440)
chr8 (221-262)||(32845064-32845105)
chr8 (226-263)||(41532488-41532525)
chr8 (219-263)||(7390551-7390595)
chr8 (219-263)||(27854070-27854114)
chr8 (266-337)||(27854101-27854173)
chr8 (219-263)||(44381434-44381478)
chr8 (12-71)||(7390430-7390489)
chr8 (20-71)||(25835507-25835558)
chr8 (266-337)||(28528603-28528674)
chr8 (12-71)||(32846322-32846381)
chr8 (12-71)||(44381536-44381595)
chr8 (138-200)||(7389918-7389980)
chr8 (226-260)||(24254818-24254852)
chr8 (221-262)||(8161911-8161952)
chr8 (261-306)||(24254930-24254975)
chr8 (20-64)||(1943566-1943610)
chr8 (20-64)||(8162019-8162063)
chr8 (20-64)||(8761501-8761545)
chr8 (219-263)||(24250468-24250511)
chr8 (219-263)||(25619424-25619468)
chr8 (20-64)||(32844952-32844996)
[»] chr3 (70 HSPs)
chr3 (89-203)||(51656992-51657098)
chr3 (138-202)||(35856128-35856192)
chr3 (138-203)||(9764577-9764642)
chr3 (102-203)||(11586015-11586116)
chr3 (102-201)||(13495534-13495633)
chr3 (138-203)||(9772812-9772877)
chr3 (138-203)||(55291137-55291202)
chr3 (138-202)||(26101412-26101476)
chr3 (138-202)||(29529494-29529558)
chr3 (144-203)||(8234915-8234974)
chr3 (144-203)||(11585887-11585946)
chr3 (139-202)||(19361992-19362055)
chr3 (139-202)||(19368072-19368135)
chr3 (137-200)||(35855497-35855560)
chr3 (138-203)||(8395988-8396053)
chr3 (138-203)||(18684884-18684949)
chr3 (138-203)||(51656813-51656878)
chr3 (138-202)||(19361367-19361431)
chr3 (118-186)||(38362615-38362683)
chr3 (89-188)||(46487498-46487595)
chr3 (144-203)||(39093786-39093845)
chr3 (138-200)||(26777178-26777240)
chr3 (138-200)||(39093272-39093334)
chr3 (138-200)||(52842533-52842595)
chr3 (138-200)||(55294027-55294089)
chr3 (102-203)||(3753351-3753451)
chr3 (138-203)||(5557609-5557674)
chr3 (143-203)||(9764705-9764764)
chr3 (219-263)||(9772812-9772856)
chr3 (139-203)||(46487709-46487773)
chr3 (139-203)||(46488358-46488422)
chr3 (144-203)||(8113461-8113520)
chr3 (150-203)||(11583333-11583386)
chr3 (219-263)||(3753407-3753451)
chr3 (219-263)||(8234930-8234974)
chr3 (219-263)||(9764577-9764621)
chr3 (219-263)||(11585902-11585946)
chr3 (219-263)||(18684884-18684928)
chr3 (219-263)||(39093786-39093830)
chr3 (12-71)||(8526931-8526990)
chr3 (266-325)||(11586013-11586072)
chr3 (12-71)||(19361491-19361550)
chr3 (12-71)||(26101535-26101594)
chr3 (12-71)||(29529616-29529675)
chr3 (219-262)||(35856128-35856171)
chr3 (138-200)||(4138033-4138095)
chr3 (154-200)||(40823932-40823978)
chr3 (138-200)||(48520286-48520348)
chr3 (165-202)||(8526835-8526872)
chr3 (143-203)||(11582417-11582478)
chr3 (226-263)||(11583349-11583386)
chr3 (226-263)||(51657061-51657098)
chr3 (226-263)||(55291165-55291202)
chr3 (219-263)||(8113461-8113505)
chr3 (226-262)||(8526836-8526872)
chr3 (226-262)||(19362019-19362055)
chr3 (226-262)||(19368099-19368135)
chr3 (226-262)||(26101440-26101476)
chr3 (266-306)||(46487594-46487634)
chr3 (219-262)||(29529515-29529558)
chr3 (12-71)||(35856010-35856069)
chr3 (12-78)||(8113339-8113404)
chr3 (221-263)||(8395988-8396030)
chr3 (266-308)||(11585854-11585896)
chr3 (219-261)||(13495591-13495633)
chr3 (221-263)||(51656836-51656878)
chr3 (261-306)||(8235045-8235090)
chr3 (261-306)||(8526943-8526988)
chr3 (25-78)||(47757036-47757089)
chr3 (219-263)||(5557630-5557674)
[»] chr2 (59 HSPs)
chr2 (118-201)||(10129692-10129775)
chr2 (138-203)||(1513506-1513571)
chr2 (123-203)||(25882859-25882939)
chr2 (138-203)||(4290302-4290367)
chr2 (138-203)||(18091347-18091412)
chr2 (138-202)||(17837932-17837996)
chr2 (138-203)||(6931362-6931427)
chr2 (138-203)||(9543268-9543333)
chr2 (138-202)||(19484929-19484993)
chr2 (138-202)||(19487504-19487568)
chr2 (138-202)||(42781910-42781974)
chr2 (139-202)||(28609165-28609228)
chr2 (267-328)||(10129773-10129833)
chr2 (138-203)||(25236014-25236079)
chr2 (142-202)||(10875154-10875214)
chr2 (138-202)||(18091982-18092046)
chr2 (138-202)||(32676277-32676341)
chr2 (144-203)||(25883192-25883251)
chr2 (138-200)||(32676912-32676974)
chr2 (89-203)||(25236193-25236295)
chr2 (12-71)||(19485052-19485111)
chr2 (12-71)||(19487386-19487445)
chr2 (144-203)||(25883035-25883094)
chr2 (12-71)||(42781792-42781851)
chr2 (138-200)||(9543901-9543963)
chr2 (138-200)||(10048277-10048339)
chr2 (12-78)||(25236481-25236547)
chr2 (145-203)||(25883349-25883407)
chr2 (138-200)||(28608548-28608610)
chr2 (139-200)||(4290936-4290997)
chr2 (219-263)||(1513527-1513571)
chr2 (219-263)||(4290323-4290367)
chr2 (219-263)||(9543289-9543333)
chr2 (219-263)||(18091368-18091412)
chr2 (219-263)||(25882859-25882903)
chr2 (219-263)||(25883192-25883236)
chr2 (219-262)||(17837932-17837975)
chr2 (219-261)||(10129692-10129734)
chr2 (161-203)||(25236381-25236423)
chr2 (12-65)||(10875273-10875326)
chr2 (217-262)||(19487504-19487549)
chr2 (226-263)||(25236258-25236295)
chr2 (227-263)||(6931362-6931398)
chr2 (226-262)||(42781910-42781946)
chr2 (143-203)||(44240802-44240862)
chr2 (12-71)||(6931245-6931304)
chr2 (219-262)||(10875171-10875214)
chr2 (12-71)||(18091470-18091529)
chr2 (219-262)||(19484950-19484993)
chr2 (219-262)||(28609165-28609208)
chr2 (138-200)||(1514234-1514296)
chr2 (221-263)||(25236381-25236423)
chr2 (229-263)||(25883035-25883069)
chr2 (266-308)||(25883085-25883127)
chr2 (14-71)||(9543394-9543451)
chr2 (261-306)||(18091482-18091527)
chr2 (261-306)||(25236149-25236194)
chr2 (23-71)||(4290436-4290484)
chr2 (219-263)||(25883349-25883393)
[»] scaffold0057 (4 HSPs)
scaffold0057 (138-203)||(18034-18099)
scaffold0057 (138-200)||(18667-18729)
scaffold0057 (219-263)||(18055-18099)
scaffold0057 (12-71)||(18157-18216)
[»] scaffold0079 (3 HSPs)
scaffold0079 (138-202)||(9341-9405)
scaffold0079 (138-200)||(9981-10043)
scaffold0079 (219-262)||(9362-9405)
[»] scaffold0108 (3 HSPs)
scaffold0108 (120-203)||(13814-13897)
scaffold0108 (219-263)||(13814-13858)
scaffold0108 (107-203)||(13982-14078)
[»] scaffold0009 (3 HSPs)
scaffold0009 (138-202)||(232542-232606)
scaffold0009 (138-200)||(231911-231973)
scaffold0009 (219-262)||(232542-232585)
[»] scaffold0115 (6 HSPs)
scaffold0115 (138-200)||(3359-3421)
scaffold0115 (138-203)||(3973-4043)
scaffold0115 (138-203)||(11713-11783)
scaffold0115 (229-263)||(3973-4007)
scaffold0115 (229-263)||(11713-11747)
scaffold0115 (219-260)||(3359-3400)
[»] scaffold2127 (3 HSPs)
scaffold2127 (138-203)||(933-998)
scaffold2127 (219-263)||(933-977)
scaffold2127 (23-71)||(817-865)
[»] scaffold0032 (4 HSPs)
scaffold0032 (154-203)||(3598-3647)
scaffold0032 (219-263)||(3603-3647)
scaffold0032 (138-190)||(4215-4267)
scaffold0032 (138-190)||(10664-10716)
[»] scaffold0484 (2 HSPs)
scaffold0484 (150-202)||(8809-8861)
scaffold0484 (219-262)||(8818-8861)
[»] scaffold0381 (4 HSPs)
scaffold0381 (138-202)||(10454-10518)
scaffold0381 (138-200)||(9823-9885)
scaffold0381 (221-262)||(10454-10495)
scaffold0381 (20-64)||(10343-10387)
[»] scaffold0374 (1 HSPs)
scaffold0374 (102-191)||(2337-2427)
[»] scaffold0051 (1 HSPs)
scaffold0051 (138-200)||(54906-54968)
[»] scaffold0069 (1 HSPs)
scaffold0069 (138-200)||(13671-13733)
[»] scaffold0230 (1 HSPs)
scaffold0230 (138-175)||(27303-27340)
[»] scaffold0642 (2 HSPs)
scaffold0642 (26-78)||(1-53)
scaffold0642 (266-306)||(4-44)


Alignment Details
Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 50290008 - 50290122
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  50290008 tattatgttacgttattcataaatgttaatccgtctcgctatagttaacctaattttaacttaatttttccctccacacttttgcatttaatgtttatct 50290107  T
Q  189 aaagtaaaataaaat 203  Q
    |||||||||||||||    
T  50290108 aaagtaaaataaaat 50290122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 39268653 - 39268553
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||| ||||||||||||||| |||  ||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  39268653 tacttataaacgttaatccgtctcgctatacgtaacccaattttaacctaattttt-cctccacacttttgcatttaatgtttatctaaagtaaaataaa 39268555  T
Q  202 at 203  Q
    ||    
T  39268554 at 39268553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 52311477 - 52311410
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaataa 205  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  52311477 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaataa 52311410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 4892733 - 4892668
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  4892733 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 4892668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 5427614 - 5427549
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  5427614 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 5427549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 29185754 - 29185819
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  29185754 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 29185819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 33362336 - 33362271
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  33362336 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 33362271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 45914384 - 45914319
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  45914384 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 45914319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 1827743 - 1827679
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  1827743 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 1827679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 19321053 - 19321117
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  19321053 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 19321117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 22198000 - 22198064
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  22198000 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 22198064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 28572441 - 28572377
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  28572441 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 28572377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 33074751 - 33074815
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  33074751 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 33074815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 38896113 - 38896049
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  38896113 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 38896049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 46624115 - 46624179
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46624115 ctaattttaatctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaa 46624179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 50278162 - 50278224
Alignment:
Q  140 aattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  50278162 aattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 50278224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 16301581 - 16301516
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  16301581 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagttaaataaaat 16301516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 39268754 - 39268658
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    |||| |||||||||||  ||||| || ||| |||| ||||||||||| |||||||   |||||||||||||||| ||||||||||||||||||||||    
T  39268754 tacttataaatgttaacgcgtcttgctatatttaaactaattttaacctaattttcctctccacacttttgcatttaatgtttatctaaagtaaaat 39268658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 50289830 - 50289893
Alignment:
Q  140 aattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||    
T  50289830 aattttaacctaatttttccctccacacttttgcatttaatgtttatataaagtaaaataaaat 50289893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 1827117 - 1827055
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  1827117 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 1827055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 28571065 - 28571003
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  28571065 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 28571003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 33075383 - 33075445
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  33075383 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 33075445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 28947326 - 28947261
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| || |||||||||||||||||||    
T  28947326 ctaattttaacctaatttttccctccacacttttgcatataatcttcatctaaagtaaaataaaat 28947261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 337
Target Start/End: Complemental strand, 39268696 - 39268584
Alignment:
Q  220 ctccaaacttttgcatttaatgtttatttaaagtaaaataaaatcccttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaac 319  Q
    ||||| ||||||||||||||||||||| |||||||||||     | ||||||||| || |||||   |||||||||||| ||||| ||| |||||||||     
T  39268696 ctccacacttttgcatttaatgtttatctaaagtaaaat-----ctcttacttataaacgttaatccgtctcgctatacgtaacccaattttaacctaat 39268602  T
Q  320 ttttcctccacacctttg 337  Q
    ||||||||||||| ||||    
T  39268601 ttttcctccacacttttg 39268584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 43991497 - 43991562
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| |||||||||| |||||||||||    
T  43991497 ctaattttaacctaatttttccctccacacttttgcatttaatatttatctaaaataaaataaaat 43991562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 47137156 - 47137091
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||  | |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  47137156 ctaattttaaactgatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 47137091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 50289952 - 50290013
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattat 73  Q
    ||||||| |||||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  50289952 tatacttaacttaatctcttacttataaatcttaacccgtcttgctatacttaacctattat 50290013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 28571698 - 28571634
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | |||| |||||||||| ||||||||||||||||||||||||||    
T  28571698 ctaattttaacctaatttttccatccatacttttgcatttaatgtttatctaaagtaaaataaaa 28571634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 21008083 - 21008020
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaataaaa 207  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  21008083 ttaacctaatttttccctccacgcttttgcatttaatgtttatctgaagtaaaataaaataaaa 21008020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 50562784 - 50562717
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacactt 169  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||| ||| |||| |||||||||||    
T  50562784 tacttataaatgttaatccgtctcgctatacttaacctaattttaacctaacttttccctccacactt 50562717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 5426992 - 5426930
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||| ||||||    
T  5426992 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaagtcaaataa 5426930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 22198632 - 22198694
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| ||||||||||||||||| |||| ||| |||||||||||||| |||||||||    
T  22198632 ctaattttaacctaattttttcctccacatttttacatttaatgtttatctaaggtaaaataa 22198694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 50562696 - 50562631
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||   || |||||||||||||||||||||||||||    
T  50562696 ctaattttaacctaatttttccctccacactttaatatttaatgtttatctaaagtaaaataaaat 50562631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 28947147 - 28947091
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaatttt 145  Q
    |||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||||    
T  28947147 tattatgttacgttacttataaatgttaatccgtctcgctatacttaacctaatttt 28947091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 1827620 - 1827561
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  1827620 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacttatt 1827561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 19321176 - 19321235
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  19321176 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 19321235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 4892100 - 4892038
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  4892100 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 4892038  T

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Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 16301059 - 16300997
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| || ||||||    
T  16301059 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaataa 16300997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 29186387 - 29186449
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  29186387 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 29186449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 33361703 - 33361641
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  33361703 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 33361641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 50278283 - 50278349
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| ||||||||||||| ||||| |||||||| | |||||| |||||||||||||||| ||||    
T  50278283 tatacttaacttaatctcttatttatagatcttaactcgtcttgctatacttaacatattatgttac 50278349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 50562785 - 50562727
Alignment:
Q  267 ttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttcc 325  Q
    |||||||| ||||||||   |||||||||||||||||||||| ||||||||||||||||    
T  50562785 ttacttataaatgttaatccgtctcgctatacttaacctaattttaacctaacttttcc 50562727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 51965094 - 51965156
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||| ||||    
T  51965094 ctaattttaacataatttttccctccacacttttacatttaatgtttatctaaggtaagataa 51965156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 28946850 - 28946789
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattat 73  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||| ||||||||| ||||||    
T  28946850 tatacttaacataatctcttacttataaatgttaacccgtcttgctatacttaacctattat 28946789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 32575627 - 32575574
Alignment:
Q  150 taattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||||| ||||||||| || ||||||||||||||| |||||||||||    
T  32575627 taattttttcctctacacttttgtatttaatgtttatctaaaataaaataaaat 32575574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 46624238 - 46624291
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaa 65  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||    
T  46624238 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaa 46624291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 4892712 - 4892668
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  4892712 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 4892668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 5427593 - 5427549
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  5427593 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 5427549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 29185775 - 29185819
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  29185775 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 29185819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 33362315 - 33362271
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  33362315 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 33362271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 39268597 - 39268553
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  39268597 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 39268553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 45914363 - 45914319
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  45914363 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 45914319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 47137135 - 47137091
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  47137135 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 47137091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 50289849 - 50289893
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  50289849 cctccacacttttgcatttaatgtttatataaagtaaaataaaat 50289893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 50290078 - 50290122
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  50290078 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 50290122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 50562064 - 50562004
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    ||||||||||| ||||||||  |||||||||||| ||| |||||||||||||| |||||||    
T  50562064 ctaattttaacctaatttttctctccacacttttacatttaatgtttatctaaggtaaaat 50562004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 52311456 - 52311412
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  52311456 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 52311412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 1827722 - 1827679
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  1827722 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 1827679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 5427488 - 5427429
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  5427488 tatacttaacataatctcttacttataaatgttaacccgtcttgctatacttaacctatt 5427429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 19321074 - 19321117
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  19321074 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 19321117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 22198021 - 22198064
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  22198021 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 22198064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 22198130 - 22198181
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||| ||||    
T  22198130 acttaatatcttacttataaatgttaacccgtcttgcaatacttaacctatt 22198181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 28572318 - 28572259
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  28572318 tatacttaatttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 28572259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 28572420 - 28572377
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  28572420 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 28572377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 28946952 - 28946913
Alignment:
Q  164 acacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  28946952 acacttttgcatttaatgtttatctaaagtaaaataaaat 28946913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 33074772 - 33074815
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  33074772 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 33074815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 33074881 - 33074932
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||| ||||    
T  33074881 acttaatatcttacttataaatgttaacccgtcttgcaatacttaacctatt 33074932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 38895985 - 38895926
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||  ||||||||| ||||    
T  38895985 tatacttaacttaatctcttacttataaatgttaacccgtcttgttatacttaacctatt 38895926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 38896092 - 38896049
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  38896092 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 38896049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 46624136 - 46624179
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  46624136 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 46624179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 50278181 - 50278224
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  50278181 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 50278224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 52311354 - 52311295
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  52311354 tatacttaacctaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 52311295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 28947203 - 28947137
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||||| ||| || ||||||||| |||||| ||||    
T  28947203 tatacttaacataatctcttacttataaatgttaacccgtctcgctatacttaacctattatgttac 28947137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 52310851 - 52310789
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||| ||||| |||||||| ||||||||||||| ||| | |||||||||||| |||||||||    
T  52310851 ctaatgttaacctaatttttccctccacacttttacatttcatgtttatctaaggtaaaataa 52310789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 28571675 - 28571634
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  28571675 tccatacttttgcatttaatgtttatctaaagtaaaataaaa 28571634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 28946950 - 28946913
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  28946950 acttttgcatttaatgtttatctaaagtaaaataaaat 28946913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 16301560 - 16301516
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||    
T  16301560 cctccacacttttgcatttaatgtttatctaaagttaaataaaat 16301516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 4892610 - 4892551
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  4892610 tatacttaacctaatctcttacttataaatgttaatccctcttgctatacttaacctatt 4892551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 8998523 - 8998566
Alignment:
Q  155 ttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||    
T  8998523 ttttcctccacacttttgcatttaatgtttatctacagtcaaat 8998566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 29185877 - 29185936
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  29185877 tatacttaacctaatctcttacttataaatgttaatccctcttgctatacttaacctatt 29185936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 33362213 - 33362154
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  33362213 tatacttaacctaatctcttacttataaatgttaatccctcttgctatacttaacctatt 33362154  T

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Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 16301456 - 16301399
Alignment:
Q  14 tactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||| || ||||||||||||||| ||| ||||||| |||||| ||||||||| ||||    
T  16301456 tacttaacataatctcttacttattaatgttaacccgtcttgctatacttaacctatt 16301399  T

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Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 28947191 - 28947146
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||||    
T  28947191 aatctcttacttataaatgttaacccgtctcgctatacttaaccta 28947146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 45914261 - 45914200
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattat 73  Q
    ||||||| || ||||||||||||||||||| ||||||| | || | ||||||||| ||||||    
T  45914261 tatacttaacataatctcttacttataaatgttaacccgttttactatacttaacctattat 45914200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 21008060 - 21008024
Alignment:
Q  227 cttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||||| | ||||||||||||||    
T  21008060 cttttgcatttaatgtttatctgaagtaaaataaaat 21008024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 28571567 - 28571523
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  28571567 acttaatctcttatttataaatgttaacccgtcttgctatactta 28571523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 28947011 - 28946963
Alignment:
Q  260 aaatcccttacttatgaatgttaacatgtctcgctatacttaacctaat 308  Q
    ||||| ||||||||| |||||||||   |||||||||||||||||||||    
T  28947011 aaatctcttacttataaatgttaacccttctcgctatacttaacctaat 28946963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 43991518 - 43991562
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||| ||||| |||| |||||||||||    
T  43991518 cctccacacttttgcatttaatatttatctaaaataaaataaaat 43991562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 47137023 - 47136975
Alignment:
Q  23 taatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||||||||||||||| ||||||| |||| | ||||||||| ||||    
T  47137023 taatctcttacttataaatgttaacccgtcttactatacttaacctatt 47136975  T

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Target: chr5 (Bit Score: 91; Significance: 5e-44; HSPs: 124)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 3890757 - 3890871
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  3890757 tattatgttacgttacttataaatgttaatccgtctcgctatacttaacctaattttaacttaatttttccctccacacttttgcatataatgtttatct 3890856  T
Q  189 aaagtaaaataaaat 203  Q
    |||||||||||||||    
T  3890857 aaagtaaaataaaat 3890871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 19121689 - 19121588
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19121689 tacttataaatgttaatccgtctcgctatacttaacctaattttaacccaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaa 19121590  T
Q  202 at 203  Q
    ||    
T  19121589 at 19121588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 3890985 - 3891098
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| ||||||||||||| ||||||| ||| ||||||||||||||||  ||||||| ||| ||||||||||||| ||||||||||||    
T  3890985 tattatgttacgttacttataaatgttaatcagtctcgctatacttaacctaattttaaccaaatttttccct-cacacttttgcatttaatgtttatct 3891083  T
Q  189 aaagtaaaataaaat 203  Q
    | |||||||||||||    
T  3891084 agagtaaaataaaat 3891098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 5398862 - 5398963
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||| ||||||| ||||||||| ||| ||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  5398862 tacttatacatgttaacccgtctcgctatacttaacataattttaacctaattttttcctccacacttttgcatttaatgtttatctaaaataaaataaa 5398961  T
Q  202 at 203  Q
    ||    
T  5398962 at 5398963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 42692037 - 42691936
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||||| ||| |||||| ||||||||||||||| ||    
T  42692037 tacttataaatgttaacccgtctcgctatacttaacctaattttaacctaattttttcctccacactttttcatttaatgtgtatctaaagtaaaatgaa 42691938  T
Q  202 at 203  Q
    ||    
T  42691937 at 42691936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 42692191 - 42692078
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| ||||||||||||| |  |||||||| ||| |||||||| |||| ||||||||||||    
T  42692191 tattatgttacgttacttataaatgttaatccatctcgctatatttaacctaattttgatctaatttttccct-cacactttcgcatttaatgtttatct 42692093  T
Q  189 aaagtaaaataaaat 203  Q
    |||||||||||||||    
T  42692092 aaagtaaaataaaat 42692078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 12418968 - 12418903
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12418968 ctaattttaacctaattttttcctccacacttttgcatataatgtttatctaaagtaaaataaaat 12418903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 2182141 - 2182076
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||    
T  2182141 ctaattttaacttaatttttccctcctcacttttgcatttaatgtttatctaaagtaaaataaaat 2182076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 25696171 - 25696236
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  25696171 ctaattttaacctaattttttcctccacacttttgaatttaatgtttatctaaagtaaaataaaat 25696236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 33705388 - 33705453
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  33705388 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 33705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 34718223 - 34718158
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  34718223 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 34718158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 34726003 - 34726068
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  34726003 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 34726068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 41691907 - 41691842
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  41691907 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 41691842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 752816 - 752880
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  752816 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 752880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 17637436 - 17637500
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  17637436 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 17637500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 26601298 - 26601362
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  26601298 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 26601362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 36885529 - 36885593
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  36885529 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 36885593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 42976029 - 42976093
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  42976029 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 42976093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 43137021 - 43137085
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  43137021 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 43137085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 18241908 - 18241843
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||| |||||||||||||||||||||    
T  18241908 ctaattttaacctaattttttcatccacacttttgcatttaatgattatctaaagtaaaataaaat 18241843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 25480934 - 25480869
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  25480934 ctaatattaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 25480869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 30180722 - 30180657
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||    
T  30180722 ctaattttaacctaatttttccctccacacttttgcatttaatatttatctaaagtaaaataaaat 30180657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 35393180 - 35393116
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  35393180 ctaattttaacctaattttt-cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 35393116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 6304553 - 6304617
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  6304553 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaataaaa 6304617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 43137653 - 43137717
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  43137653 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaataaaa 43137717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 3890579 - 3890642
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| ||||||    
T  3890579 ctaattttaacctaatttttccctccacacttttgcatataatgtttatctaaagtataataaa 3890642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 25480582 - 25480523
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  25480582 ttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 25480523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 754192 - 754254
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  754192 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 754254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 6305186 - 6305248
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  6305186 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 6305248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 41290296 - 41290357
Alignment:
Q  141 attttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  41290296 attttaacctaatttt-tcctccacacttttgcatataatgtttatctaaagtaaaataaaat 41290357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 43138286 - 43138348
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  43138286 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 43138348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 35393806 - 35393742
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||  ||||||||||||||||| |||||||||||||||||||||||||||    
T  35393806 ctaattttaacctaattttc-cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 35393742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 39914607 - 39914542
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||||||||  |||||| ||||||||| |||||||||||||||||||||||||||    
T  39914607 ctaattttaacctaatttttctctccacgcttttgcatttaatgtttatctaaagtaaaataaaat 39914542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 42692370 - 42692305
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||  |||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  42692370 ctaattttaaactaatttttccctctacacttttgcatttaatgtttatctaaagtaaaataaaat 42692305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 753559 - 753623
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | |||| |||||||||| ||||||||||||||||||||||||||    
T  753559 ctaattttaacctaatttttccatccatacttttgcatttaatgtttatctaaagtaaaataaaa 753623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 190
Target Start/End: Original strand, 5398769 - 5398856
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaa 190  Q
    |||| ||||||||||| ||||||| | ||| || ||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||    
T  5398769 tacttataaatgttaa-ccgtctcactatacttcacctaattttaacctaatttttccctccacacttttgcatttgatgtttatctaa 5398856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 25480755 - 25480653
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| ||||||||||||||||||||            |||||||||| |||||||| ||| ||||||||||||| ||||||||||||    
T  25480755 tattatgttacgttacttataaatgttaatccgtctcg-----------ttaattttaacctaatttttccct-cacacttttgcatttaatgtttatct 25480668  T
Q  189 aaagtaaaataaaat 203  Q
    |||||||||||||||    
T  25480667 aaagtaaaataaaat 25480653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 42976653 - 42976717
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||| ||||||| |||||||||||||||| |||||||||    
T  42976653 ctaattttaacctaatttttccctccacacctttgcatttaatgtttatctaaagcaaaataaaa 42976717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 41290422 - 41290481
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||    
T  41290422 ttaacttaatttttctatccacacttttgcatttaatgtttatctaaagtaaaataaaat 41290481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 26601935 - 26601997
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    |||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  26601935 ctaattttaaccaaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 26601997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 29379256 - 29379334
Alignment:
Q  114 ttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacac-ttttgcatctaatgtttatctaaa 191  Q
    |||| ||||||||| ||| |||||||||||||||| |||||||| ||||||||| |||| ||| |||||||||||||||    
T  29379256 ttaacccgtctcgctatacttaacctaattttaacctaatttttccctccacactttttacatttaatgtttatctaaa 29379334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 42692046 - 42691972
Alignment:
Q  259 aaaatcccttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaa-cttttcctccacac 332  Q
    |||||| ||||||||| |||||||||  |||||||||||||||||||||| |||||||||  |||||||||||||    
T  42692046 aaaatctcttacttataaatgttaacccgtctcgctatacttaacctaattttaacctaattttttcctccacac 42691972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 22740699 - 22740744
Alignment:
Q  153 ttttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  22740699 ttttttcctccacacttttgcatttaatgtttatctaaagtaaaat 22740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 3087181 - 3087229
Alignment:
Q  154 tttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  3087181 tttttcccccacacttttgcatttaatgtttatctaaagtaaaataaaa 3087229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 3087287 - 3087346
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  3087287 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 3087346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 17637559 - 17637618
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  17637559 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 17637618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 26601421 - 26601480
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  26601421 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 26601480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 36885651 - 36885710
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  36885651 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 36885710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 42976152 - 42976211
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  42976152 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 42976211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 12419825 - 12419887
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| | || |||||||||||| |||||||||||||| |||||||||    
T  12419825 ctaattttaacctaatttttccgtcaacacttttgcatttaatgtttatctaaggtaaaataa 12419887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 33706019 - 33706080
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| ||||||| |||||||||||||| ||| |||||||||||||| |||||||||    
T  33706019 ctaattttaacctaatttt-tcctccacacttttacatttaatgtttatctaaggtaaaataa 33706080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 34717590 - 34717528
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  34717590 ctaattttaacctaatttttccctccaaacttttacatttaatgtttatctaaggtaaaataa 34717528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 34726643 - 34726705
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| || ||||||    
T  34726643 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaataa 34726705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 39914483 - 39914417
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||||||||| || ||||||||| |||||| ||||    
T  39914483 tatacttaacataatctcttacttataaatgttaacccatctcgctatacttaacctattatgttac 39914417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 41691276 - 41691214
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  41691276 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 41691214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 18241710 - 18241657
Alignment:
Q  150 taattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||  |||||||||||| ||| |||||||||||||||||||||||||||    
T  18241710 taatttttctctccacacttttacatttaatgtttatctaaagtaaaataaaat 18241657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 19121632 - 19121588
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  19121632 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 19121588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 25480567 - 25480523
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  25480567 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 25480523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 25480913 - 25480869
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  25480913 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 25480869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 33705409 - 33705453
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  33705409 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 33705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 34718202 - 34718158
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  34718202 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 34718158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 34726024 - 34726068
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  34726024 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 34726068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 35392949 - 35392901
Alignment:
Q  155 ttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  35392949 ttttcccccacgcttttgcatttaatgtttatctaaagtaaaataaaat 35392901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 35393160 - 35393116
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  35393160 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 35393116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 35393786 - 35393742
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  35393786 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 35393742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 41691886 - 41691842
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  41691886 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 41691842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 752837 - 752880
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  752837 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 752880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 752939 - 752998
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  752939 tatacttaatttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 752998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 17637457 - 17637500
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  17637457 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 17637500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 18241772 - 18241725
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaacctaat 308  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  18241772 aatctcttacttataaatgttaacctgtctcgctatacttaacctaat 18241725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 26601319 - 26601362
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  26601319 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 26601362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 36885550 - 36885593
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  36885550 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 36885593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 42976050 - 42976093
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  42976050 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 42976093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 43137042 - 43137085
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  43137042 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 43137085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 43137144 - 43137203
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  43137144 tatacttaatttaatctcttacttataaatattaacccgtcttgccatacttaacctatt 43137203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 337
Target Start/End: Complemental strand, 19121697 - 19121619
Alignment:
Q  260 aaatcccttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaa-cttttcctccacacctttg 337  Q
    ||||| ||||||||| ||||||||   |||||||||||||||||||||| |||||| ||  ||||||||||||| ||||    
T  19121697 aaatctcttacttataaatgttaatccgtctcgctatacttaacctaattttaacccaattttttcctccacacttttg 19121619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 25480466 - 25480396
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttacttta 82  Q
    ||||||| || ||||||||||||||||||| |||||   |||||| ||||||||| |||||| ||||||||    
T  25480466 tatacttaacctaatctcttacttataaatgttaacttgtcttgctatacttaacctattatgttacttta 25480396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 25696802 - 25696864
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||| | |||||| ||| |||||||||||||| |||||||||    
T  25696802 ctaattttaacctaatttttccctctagacttttacatttaatgtttatctaaggtaaaataa 25696864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 41290439 - 41290481
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  41290439 tccacacttttgcatttaatgtttatctaaagtaaaataaaat 41290481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 753582 - 753623
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  753582 tccatacttttgcatttaatgtttatctaaagtaaaataaaa 753623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 2182113 - 2182076
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  2182113 acttttgcatttaatgtttatctaaagtaaaataaaat 2182076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 5398855 - 5398932
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaa-cttttcctccacacctttg 337  Q
    |||| |||||||||  ||||||||  ||||||||||||||||| |||| |||||||||  ||||||||||||| ||||    
T  5398855 aatctcttacttatacatgttaacccgtctcgctatacttaacataattttaacctaattttttcctccacacttttg 5398932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 6304576 - 6304617
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  6304576 tccacacttttgcatttaatgtttatctaaagtaaaataaaa 6304617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 25480690 - 25480653
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  25480690 acttttgcatttaatgtttatctaaagtaaaataaaat 25480653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 25480799 - 25480754
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||    
T  25480799 aatctcttacttataaatgttaacctgtctcgctatacttaaccta 25480754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 42692342 - 42692305
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  42692342 acttttgcatttaatgtttatctaaagtaaaataaaat 42692305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 43137676 - 43137717
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  43137676 tccacacttttgcatttaatgtttatctaaagtaaaataaaa 43137717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 2182008 - 2181960
Alignment:
Q  23 taatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||| ||||    
T  2182008 taatctcttacttataaatgttaactcatcttgctatacttaacctatt 2181960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 3087193 - 3087229
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||||||||||||||||||| |||||||||||||||    
T  3087193 acttttgcatttaatgtttatctaaagtaaaataaaa 3087229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 3890827 - 3890871
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||    
T  3890827 cctccacacttttgcatataatgtttatctaaagtaaaataaaat 3890871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 5398919 - 5398963
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| |||| |||||||||||    
T  5398919 cctccacacttttgcatttaatgtttatctaaaataaaataaaat 5398963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 12418947 - 12418903
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||    
T  12418947 cctccacacttttgcatataatgtttatctaaagtaaaataaaat 12418903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 25696192 - 25696236
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||    
T  25696192 cctccacacttttgaatttaatgtttatctaaagtaaaataaaat 25696236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 30180701 - 30180657
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||    
T  30180701 cctccacacttttgcatttaatatttatctaaagtaaaataaaat 30180657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 35392937 - 35392901
Alignment:
Q  227 cttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||||| ||||||||||||||||    
T  35392937 cttttgcatttaatgtttatctaaagtaaaataaaat 35392901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 39914427 - 39914375
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaa 141  Q
    |||||||||||| |||| ||| ||||||||||||||||| ||| |||||||||    
T  39914427 tattatgttacgttacttatagatgttaatccgtctcgctatacttaacctaa 39914375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 39914578 - 39914542
Alignment:
Q  227 cttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||||| ||||||||||||||||    
T  39914578 cttttgcatttaatgtttatctaaagtaaaataaaat 39914542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 41290313 - 41290357
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||||||| |||||||||| ||||||||||||||||    
T  41290313 cctccacacttttgcatataatgtttatctaaagtaaaataaaat 41290357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 337
Target Start/End: Original strand, 3890769 - 3890840
Alignment:
Q  267 ttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaactttt-cctccacacctttg 337  Q
    |||||||| ||||||||   |||||||||||||||||||||| ||||| ||| |||| ||||||||| ||||    
T  3890769 ttacttataaatgttaatccgtctcgctatacttaacctaattttaacttaatttttccctccacacttttg 3890840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 18241700 - 18241657
Alignment:
Q  220 ctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||    
T  18241700 ctccacacttttacatttaatgtttatctaaagtaaaataaaat 18241657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 22740705 - 22740744
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaat 258  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  22740705 cctccacacttttgcatttaatgtttatctaaagtaaaat 22740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 34718100 - 34718041
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  34718100 tatacttaacctaatctcttacttataaatgttaatccctcttgctatacttaacctatt 34718041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 34726129 - 34726188
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||||| | |||||| ||||||||| ||||    
T  34726129 tatacttaacataatctcttacttataaatgttaactcgtcttgctatacttaacctatt 34726188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 41691784 - 41691725
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  41691784 tatacttaacctaatctcttacttataaatgttaatccctcttgctatacttaacctatt 41691725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #105
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 42976774 - 42976833
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||  |||||| ||||||||| ||||    
T  42976774 tatacttaatttaatctcttacttataaatgttaacctgtcttgctatacttaacctatt 42976833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #106
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 3890997 - 3891055
Alignment:
Q  267 ttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttcc 325  Q
    |||||||| ||||||||   |||||||||||||||||||||| |||||| || ||||||    
T  3890997 ttacttataaatgttaatcagtctcgctatacttaacctaattttaaccaaatttttcc 3891055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #107
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 3891156 - 3891222
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||  | |||||| ||||||||| |||||| ||||    
T  3891156 tatacttaacctaatctcttacttataaatgttaattcgtcttgctatacttaacctattatgttac 3891222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #108
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 18241885 - 18241843
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||| |||||||||||||||| |||| ||||||||||||||||    
T  18241885 tccacacttttgcatttaatgattatctaaagtaaaataaaat 18241843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #109
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 25480811 - 25480745
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||||  ||| || ||||||||| |||||| ||||    
T  25480811 tatacttaacataatctcttacttataaatgttaacctgtctcgctatacttaacctattatgttac 25480745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #110
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 325
Target Start/End: Original strand, 29379263 - 29379301
Alignment:
Q  287 gtctcgctatacttaacctaatcttaacctaacttttcc 325  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  29379263 gtctcgctatacttaacctaattttaacctaatttttcc 29379301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #111
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 42691879 - 42691813
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| |||| || |||| | ||||||||| |||||| ||||    
T  42691879 tatacttaacctaatctcttacttataaatgttaatccgtcttactatacttaacctattatgttac 42691813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #112
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 3891061 - 3891098
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| || |||||||||||||    
T  3891061 acttttgcatttaatgtttatctagagtaaaataaaat 3891098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #113
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 19121817 - 19121756
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattat 73  Q
    ||||||| |||||||||||||||||||||| |||| || ||| |  ||||||||| ||||||    
T  19121817 tatacttaacttaatctcttacttataaatgttaatccgtctcgttatacttaacctattat 19121756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #114
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 25480454 - 25480409
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| ||||||||| ||||| |||||||||||||||    
T  25480454 aatctcttacttataaatgttaacttgtcttgctatacttaaccta 25480409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #115
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 34717569 - 34717528
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataa 260  Q
    ||||||||||||| |||||||||||||| ||| |||||||||    
T  34717569 cctccaaacttttacatttaatgtttatctaaggtaaaataa 34717528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #116
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 35393057 - 35392996
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattat 73  Q
    ||||||| || ||||||||||||||||||||||||| | ||| || ||| ||||| ||||||    
T  35393057 tatacttaacctaatctcttacttataaatcttaactcgtctcgctatatttaacctattat 35392996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #117
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 42692115 - 42692078
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  42692115 actttcgcatttaatgtttatctaaagtaaaataaaat 42692078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #118
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 42976786 - 42976831
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| ||||||||| ||||| |||||||||||||||    
T  42976786 aatctcttacttataaatgttaacctgtcttgctatacttaaccta 42976831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #119
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 753690 - 753734
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  753690 acttaatctcttatttataaatgttaacccgtcttgctatactta 753734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #120
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 3890929 - 3890981
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||| || ||||||||||||||||||| ||||||| ||| || |||||||    
T  3890929 tatacttaacataatctcttacttataaatgttaacccgtctcgctatactta 3890981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #121
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 6304684 - 6304728
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    |||||||||||||||||||||| ||||| | |||||| |||||||    
T  6304684 acttaatctcttacttataaatgttaactcgtcttgctatactta 6304728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #122
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 30180085 - 30180037
Alignment:
Q  142 ttttaacttaattttttcctccacacttttgcatctaatgtttatctaa 190  Q
    ||||||| |||||||| |||||| |||||| ||| ||||||||||||||    
T  30180085 ttttaacctaatttttccctccagacttttacatttaatgtttatctaa 30180037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #123
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 30180588 - 30180540
Alignment:
Q  23 taatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  30180588 taatctcttacttataaatgttaatccttcttgctatacttaacctatt 30180540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #124
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 43137784 - 43137828
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  43137784 acttaatctcttatttataaatgttaacccgtcttgctatactta 43137828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 5e-41; HSPs: 106)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 40107650 - 40107763
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| ||||||||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  40107650 tattatgttacgttacttataaatgttaatctgtctcgctatacttaacctaattttaacctaattttttcctccacacttttgcatttaatgtttatct 40107749  T
Q  189 aaagtaaaataaaa 202  Q
    ||||||||||||||    
T  40107750 aaagtaaaataaaa 40107763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 20077756 - 20077857
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| ||||||||| ||| ||||| |||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  20077756 tacttataaatgttaacccgtctcgctatacttaacttaattttaacctaattttttcatccacacttttgcatttaatgtctatctaaagtaaaataaa 20077855  T
Q  202 at 203  Q
    ||    
T  20077856 at 20077857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 728541 - 728642
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| |||||||||||  |||||||| ||| |||||||||||||||| |||||||| | |||| |||||||||| |||||||||||||||||||||||||    
T  728541 tacttataaatgttaactcgtctcgctataattaacctaattttaacctaatttttccatccatacttttgcatttaatgtttatctaaagtaaaataaa 728640  T
Q  202 at 203  Q
    ||    
T  728641 at 728642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 40241386 - 40241501
Alignment:
Q  89 tattatgttacgctactcataaa-tgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatc 187  Q
    ||||||| |||| |||| ||||| | ||||||||||||||  || |||||||||||||||| |||||||| ||||||||||||||||| |||| || |||    
T  40241386 tattatgctacgttacttataaaatattaatccgtctcgctgtacttaacctaattttaacctaatttttccctccacacttttgcatttaatattcatc 40241485  T
Q  188 taaagtaaaataaaat 203  Q
    ||||||||||||||||    
T  40241486 taaagtaaaataaaat 40241501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 31897442 - 31897507
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31897442 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaat 31897507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 36158460 - 36158525
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36158460 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaat 36158525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 9150939 - 9150874
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  9150939 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 9150874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 17171659 - 17171594
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  17171659 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 17171594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 27733697 - 27733762
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  27733697 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 27733762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 33637402 - 33637467
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  33637402 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 33637467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 49144777 - 49144842
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  49144777 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 49144842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 24683037 - 24683101
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  24683037 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 24683101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 29468740 - 29468676
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  29468740 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 29468676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 32201276 - 32201389
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    ||||||| |||| |||| |||||||| ||||| |||| | ||| |||||||||||||||||||| |||| || |||||||||| ||| ||||| ||||||    
T  32201276 tattatgctacgttacttataaatgtcaatccatctcactatacttaacctaattttaacttaa-ttttccccccacacttttacatttaatggttatct 32201374  T
Q  189 aaagtaaaataaaat 203  Q
    | |||||||||||||    
T  32201375 atagtaaaataaaat 32201389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 4849747 - 4849682
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||  ||||||||||||||||| |||||||||||||||||||||||||||    
T  4849747 ctaattttaacctaattttaccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 4849682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 20077436 - 20077501
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  20077436 ctaattttaacctaatttttccctccacaattttgcatttaatgtttatctaaagtaaaataaaat 20077501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 39648601 - 39648666
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||    
T  39648601 ctaattttaacctaatttttccctccacacttttgcatttaatatttatctaaagtaaaataaaat 39648666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 7855714 - 7855778
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  7855714 ctaattttaacctaatttttccccccacacttttgcatttaatgtttatctaaagtaaaataaaa 7855778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 24683767 - 24683831
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  24683767 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaataaaa 24683831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 34873111 - 34873047
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  34873111 ctaattttaacctaatttttccttccacacttttgcatttaatgtttatctaaagtaaaataaaa 34873047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 690579 - 690514
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| | ||||||||||||||| |||||||||||||| ||||||||||||    
T  690579 ctaattttaacctaatttttccttccacacttttgcatttaatgtttatctaaggtaaaataaaat 690514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 12409572 - 12409621
Alignment:
Q  154 tttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12409572 tttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaat 12409621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 36158639 - 36158741
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| |||||||||||||            ||| |||||||||||||| ||||||||||||    
T  36158639 tattatgttacgttacttataaatgttaatccatctcgctatacttaacctaatttt------------tcccccacacttttgcatttaatgtttatct 36158726  T
Q  189 aaagtaaaataaaat 203  Q
    |||||||||||||||    
T  36158727 aaagtaaaataaaat 36158741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 35156121 - 35156185
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||||||| ||||    
T  35156121 ctaattttaacctaatttttcccttcacacttttgcatttaatgtttatctaaagtaaaagaaaa 35156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 26454963 - 26455022
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||| ||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||    
T  26454963 ttaatttaatttttccctccacacttttgcatttaatgtttatttaaagtaaaataaaat 26455022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 24684400 - 24684462
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||    
T  24684400 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctacggtaaaataa 24684462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 27734301 - 27734363
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||||||||    
T  27734301 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtaaaataa 27734363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 29468108 - 29468046
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| ||||||||||||||||| |||| ||| |||||||||||||| |||||||||    
T  29468108 ctaattttaacctaattttttcctccacatttttacatttaatgtttatctaaggtaaaataa 29468046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 32201102 - 32201160
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaa 196  Q
    |||||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  32201102 ctaattttgacctaattttttccaccacacttttgcatttaatgtttatctaaagtaaa 32201160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 24396802 - 24396749
Alignment:
Q  150 taattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  24396802 taatttttccctccacactttttcatttaatgtttatctaaagtaaaataaaat 24396749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 40107471 - 40107535
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||  ||||||||||||| | |||||||||| |||||||||||||||||||||||||||    
T  40107471 ctaattttaaactaattttttcctc-atacttttgcatttaatgtttatctaaagtaaaataaaat 40107535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 12409308 - 12409364
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagta 194  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||||||||||||||    
T  12409308 ctaattttaatctaattttttcctccacacttttacatttaatgtttatctaaagta 12409364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 20077615 - 20077717
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||  |||| ||||||||||||||||||||| ||| |||||||||||||           |||||| ||| |||||||| ||||||||||||    
T  20077615 tattatgttacattacttataaatgttaatccgtctcgctatacttaacctaatttt-----------ttcctc-acatttttgcatttaatgtttatct 20077702  T
Q  189 aaagtaaaataaaat 203  Q
    |||||||||||||||    
T  20077703 aaagtaaaataaaat 20077717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 20077920 - 20077980
Alignment:
Q  18 ttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||| ||||    
T  20077920 ttacttaatctcttacttataaatgttaacccgtcttgctatacttaacctattatgttac 20077980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 26454978 - 26455022
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  26454978 cctccacacttttgcatttaatgtttatttaaagtaaaataaaat 26455022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 34872989 - 34872929
Alignment:
Q  11 ttatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  34872989 ttatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 34872929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 7855836 - 7855895
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  7855836 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 7855895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 12409401 - 12409460
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||    
T  12409401 ttaacctaatttttccctcgacacttttgcatttaatgtttatcttaagtaaaataaaat 12409460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 24396688 - 24396625
Alignment:
Q  15 actttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    |||| |||||||||||||||||||||| ||||||| |||||| ||||||||| |||||| ||||    
T  24396688 acttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctattatgttac 24396625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 39704238 - 39704179
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| || ||||| ||||||||||||||||| |||| ||||||||||||||||||||||    
T  39704238 ttaacgtagtttttccctccacacttttgcatttaatatttatctaaagtaaaataaaat 39704179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 337
Target Start/End: Original strand, 40107662 - 40107733
Alignment:
Q  267 ttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaa-cttttcctccacacctttg 337  Q
    |||||||| ||||||||  ||||||||||||||||||||||| |||||||||  ||||||||||||| ||||    
T  40107662 ttacttataaatgttaatctgtctcgctatacttaacctaattttaacctaattttttcctccacacttttg 40107733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 44805876 - 44805813
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    |||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||||| ||||    
T  44805876 taattttaacctaatttttccctccacacttttacatttaatgtttatctaacgtaaaagaaaa 44805813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 9150338 - 9150276
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  9150338 ctaattttaacctaatttttccctccatacttttacatttaatgtttatctaaggtaaaataa 9150276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 17171026 - 17170964
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  17171026 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 17170964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 33637924 - 33637986
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||| ||||| |||||||||    
T  33637924 ctaattttaacctaatttttccctccacacttttacatttaatgtttttctaaggtaaaataa 33637986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 38029350 - 38029420
Alignment:
Q  133 ttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||| ||||||||||| ||||||||  ||||||||||||  || |||||||||||||||||||| ||||||    
T  38029350 ttaatctaattttaacctaatttttctctccacactttttaatttaatgtttatctaaagtaaactaaaat 38029420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 39704122 - 39704056
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||||| ||| |||||||||||| |||||| ||||    
T  39704122 tatacttaacctaatctcttacttataaatgttaacccgtctcgcaatacttaacctattatgttac 39704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 48528044 - 48528106
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  48528044 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 48528106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 4849726 - 4849682
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  4849726 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 4849682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 9150918 - 9150874
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  9150918 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 9150874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 12409577 - 12409621
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  12409577 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 12409621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 17171638 - 17171594
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  17171638 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 17171594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 20077747 - 20077811
Alignment:
Q  259 aaaatcccttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaactttt 323  Q
    |||||| ||||||||| |||||||||  ||||||||||||||||| |||| ||||||||| ||||    
T  20077747 aaaatctcttacttataaatgttaacccgtctcgctatacttaacttaattttaacctaattttt 20077811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 27733718 - 27733762
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  27733718 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 27733762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 31897463 - 31897507
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  31897463 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 31897507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 33637423 - 33637467
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  33637423 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 33637467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 36158481 - 36158525
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  36158481 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 36158525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 40107595 - 40107655
Alignment:
Q  13 atactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattat 73  Q
    |||||| || ||||||||||||||||||| ||||||||||| || ||||||||| ||||||    
T  40107595 atacttaacataatctcttacttataaatgttaacccatctcgctatacttaacctattat 40107655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 49144798 - 49144842
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  49144798 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 49144842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 728539 - 728598
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttcc 325  Q
    ||||||||| |||||||||  ||||||||||| |||||||||| ||||||||| ||||||    
T  728539 cttacttataaatgttaactcgtctcgctataattaacctaattttaacctaatttttcc 728598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 728744 - 728803
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| ||| |||| ||||||||||||| ||| ||||||||||||||||||||| |||||    
T  728744 ttaacctaacttttccctccacacttttccatttaatgtttatctaaagtaaaacaaaat 728803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 24683058 - 24683101
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  24683058 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 24683101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 24683160 - 24683219
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  24683160 tatacttaatttaatctcttacttataaatgttaacccgtcttgccatacttaacctatt 24683219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 29468610 - 29468559
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||| ||||    
T  29468610 acttaatatcttacttataaatgttaacccgtcttgcaatacttaacctatt 29468559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 29468719 - 29468676
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  29468719 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 29468676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 35156244 - 35156303
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| ||||||||||||| |||||||| ||||||| |||||| ||||||||| ||||    
T  35156244 tatacttaacttaatctcttatttataaatgttaacccgtcttgctatacttaacctatt 35156303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 40107720 - 40107763
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  40107720 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 40107763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 44805754 - 44805695
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  44805754 tatacttaacttaatctcttacttataaatgttaatccgtcttgctatacttaacctatt 44805695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 728600 - 728642
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  728600 tccatacttttgcatttaatgtttatctaaagtaaaataaaat 728642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 31898075 - 31898137
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||| ||||||||| |||||||||    
T  31898075 ctaattttaacctaatttttccctccagacttttacatttaatttttatctaaggtaaaataa 31898137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 32201577 - 32201643
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || |||||||||||||||||||  |||| |||||| | |||||||||||||||| ||||    
T  32201577 tatacttaacataatctcttacttataaatgataacgcatcttactatacttaacatattatgttac 32201643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 36158583 - 36158649
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||||||||||| ||| || ||||||||  |||||| ||||    
T  36158583 tatacttaacctaatctcttacttataaatcttaacccgtctcgctatacttaatctattatgttac 36158649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 39649238 - 39649296
Alignment:
Q  142 ttttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||| |||||||| |||| |||||||| ||| |||||||||||||| |||||||||    
T  39649238 ttttaacctaatttttccctctacacttttacatttaatgtttatctaaggtaaaataa 39649296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 49145542 - 49145604
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| ||||||||  |||||||||||| ||| |||||||||||||| || ||||||    
T  49145542 ctaattttaacctaatttttcactccacacttttacatttaatgtttatctaaggtcaaataa 49145604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 24683790 - 24683831
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  24683790 tccacacttttgcatttaatgtttatctaaagtaaaataaaa 24683831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 34873088 - 34873047
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  34873088 tccacacttttgcatttaatgtttatctaaagtaaaataaaa 34873047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 36158704 - 36158741
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  36158704 acttttgcatttaatgtttatctaaagtaaaataaaat 36158741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 38029493 - 38029538
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||    
T  38029493 aatctcttacttataaatgttaacctgtctcgctatacttaaccta 38029538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 40107498 - 40107535
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  40107498 acttttgcatttaatgtttatctaaagtaaaataaaat 40107535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 4849113 - 4849065
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttat 186  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||    
T  4849113 ctaattttaacctaatttttccctccacacttttacatttaatgtttat 4849065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 7855742 - 7855778
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7855742 acttttgcatttaatgtttatctaaagtaaaataaaa 7855778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 20077457 - 20077501
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||    
T  20077457 cctccacaattttgcatttaatgtttatctaaagtaaaataaaat 20077501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 24396793 - 24396749
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||| |||||||||||||| ||||||||||||||||    
T  24396793 cctccacactttttcatttaatgtttatctaaagtaaaataaaat 24396749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 29322453 - 29322489
Alignment:
Q  167 cttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||| |||||||||||||||||||||||||||    
T  29322453 cttttgcatttaatgtttatctaaagtaaaataaaat 29322489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 29322453 - 29322489
Alignment:
Q  227 cttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29322453 cttttgcatttaatgtttatctaaagtaaaataaaat 29322489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 39648622 - 39648666
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||    
T  39648622 cctccacacttttgcatttaatatttatctaaagtaaaataaaat 39648666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 39704223 - 39704179
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||    
T  39704223 cctccacacttttgcatttaatatttatctaaagtaaaataaaat 39704179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 17171536 - 17171477
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  17171536 tatacttaacctaatctcttacttataaatgttaatccctcttgctatacttaacctatt 17171477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 20077682 - 20077717
Alignment:
Q  228 ttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20077682 ttttgcatttaatgtttatctaaagtaaaataaaat 20077717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 32201434 - 32201477
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaatttt 145  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||    
T  32201434 tacttataaatgttaatccgtctcgctatacttaacctaatttt 32201477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 33637524 - 33637583
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||||| | |||||| ||||||||| ||||    
T  33637524 tatacttaacctaatctcttacttataaatgttaactcgtcttgctatacttaacctatt 33637583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 690556 - 690514
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||    
T  690556 tccacacttttgcatttaatgtttatctaaggtaaaataaaat 690514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 728498 - 728536
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgt 182  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  728498 ttaacctaattttttcctccacacttttgcatttaatgt 728536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 20077559 - 20077625
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||| | ||| || ||||||||| |||||| ||||    
T  20077559 tatacttaacctaatctcttacttataaatgttaactcgtctcgctatacttaacttattatgttac 20077625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 20077815 - 20077857
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||    
T  20077815 tccacacttttgcatttaatgtctatctaaagtaaaataaaat 20077857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 32201424 - 32201474
Alignment:
Q  258 taaaatcccttacttatgaatgttaacatgtctcgctatacttaacctaat 308  Q
    ||||||| ||||||||| ||||||||   ||||||||||||||||||||||    
T  32201424 taaaatctcttacttataaatgttaatccgtctcgctatacttaacctaat 32201474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 12409423 - 12409460
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  12409423 acttttgcatttaatgtttatcttaagtaaaataaaat 12409460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 32201220 - 32201281
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattat 73  Q
    ||||||| || ||||||| ||||||||||||||||||| ||| || |||| |||| ||||||    
T  32201220 tatacttaacctaatctcgtacttataaatcttaacccgtctcgctatacctaacctattat 32201281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 728759 - 728803
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||| |||||||||||||| |||||||||| |||||    
T  728759 cctccacacttttccatttaatgtttatctaaagtaaaacaaaat 728803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 21670430 - 21670466
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgca 174  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  21670430 ctaattttaacctaatttttccctccacacttttgca 21670466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 24683898 - 24683942
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  24683898 acttaatctcttatttataaatgttaacccgtcttgctatactta 24683942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 29322526 - 29322578
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaatt 154  Q
    |||| ||||||||||||||||||||  ||| ||||| |||||||||| |||||    
T  29322526 tacttataaatgttaatccgtctcgatatacttaacataattttaacctaatt 29322578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 35156149 - 35156185
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  35156149 acttttgcatttaatgtttatctaaagtaaaagaaaa 35156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 39277051 - 39277015
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgca 174  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  39277051 ctaattttaacctaatttttccctccacacttttgca 39277015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 39648735 - 39648783
Alignment:
Q  23 taatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  39648735 taatctcttacttataaatgttaatccttcttgctatacttaacctatt 39648783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 40241457 - 40241501
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||| || || ||||||||||||||||    
T  40241457 cctccacacttttgcatttaatattcatctaaagtaaaataaaat 40241501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 82; Significance: 1e-38; HSPs: 8)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 87514 - 87615
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  87514 tacttataaatgttaacccgtctcgctatagttaacctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaa 87613  T
Q  202 at 203  Q
    ||    
T  87614 at 87615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 87185 - 87250
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  87185 ctaattttaaactaattttttcctccacacttttgcatttaatatttatctaaagtaaaataaaat 87250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 87363 - 87474
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| || | ||||||||||||||||||| | ||| ||||||||| | ||||  ||||||| | ||  ||||||||||| ||||||||||||    
T  87363 tattatgttacgttatttataaatgttaatccgtctcactatacttaacctaaatataaccaaatttttccatcg-cacttttgcatttaatgtttatct 87461  T
Q  189 aaagtaaaataaa 201  Q
    |||||||||||||    
T  87462 aaagtaaaataaa 87474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 337
Target Start/End: Original strand, 87505 - 87584
Alignment:
Q  259 aaaatcccttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaa-cttttcctccacacctttg 337  Q
    |||||| ||||||||| |||||||||  ||||||||||| |||||||||| |||||||||  ||||||||||||| ||||    
T  87505 aaaatctcttacttataaatgttaacccgtctcgctatagttaacctaattttaacctaattttttcctccacacttttg 87584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 87571 - 87615
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  87571 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 87615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 87206 - 87250
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||    
T  87206 cctccacacttttgcatttaatatttatctaaagtaaaataaaat 87250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 261
Target Start/End: Original strand, 87439 - 87474
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaa 261  Q
    ||||||||||||||||||||| ||||||||||||||    
T  87439 acttttgcatttaatgtttatctaaagtaaaataaa 87474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 87324 - 87360
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaa 302  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  87324 cttacttataaatgttaacctgtctcgctatacttaa 87360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 6588 - 6682
Alignment:
Q  108 taaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  6588 taaatgttaa-ccgtctcgctatacttaacctaattttaacttaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 6682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 6638 - 6682
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  6638 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 6682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 70; Significance: 2e-31; HSPs: 6)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 481 - 380
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| ||||||||| ||| |||||||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||    
T  481 tacttataaatgttaacccgtctcgctatacttaacctaattttaacctaatttttccctcgacacttttgcatttaatgtttatctaaagtaaaataaa 382  T
Q  202 at 203  Q
    ||    
T  381 at 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 481 - 424
Alignment:
Q  268 tacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttcc 325  Q
    ||||||| |||||||||  |||||||||||||||||||||| ||||||||| ||||||    
T  481 tacttataaatgttaacccgtctcgctatacttaacctaattttaacctaatttttcc 424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 417 - 380
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  417 acttttgcatttaatgtttatctaaagtaaaataaaat 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 1318 - 1255
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaataaaat 208  Q
    |||||||||||||  ||||||||||||||||| ||||||||||| |||||| | |||| ||||||    
T  1318 ttaacttaattttc-cctccacacttttgcatttaatgtttatcaaaagtatagtaaagtaaaat 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 308 - 253
Alignment:
Q  23 taatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||| |||||| ||||    
T  308 taatctcttacttataaatgttaacccgtctcgctatacttaacctattatgttac 253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 307 - 262
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||||    
T  307 aatctcttacttataaatgttaacccgtctcgctatacttaaccta 262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 70; Significance: 2e-31; HSPs: 6)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 9736 - 9837
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| ||||||||| ||| |||||||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||    
T  9736 tacttataaatgttaacccgtctcgctatacttaacctaattttaacctaatttttccctcgacacttttgcatttaatgtttatctaaagtaaaataaa 9835  T
Q  202 at 203  Q
    ||    
T  9836 at 9837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 9736 - 9793
Alignment:
Q  268 tacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttcc 325  Q
    ||||||| |||||||||  |||||||||||||||||||||| ||||||||| ||||||    
T  9736 tacttataaatgttaacccgtctcgctatacttaacctaattttaacctaatttttcc 9793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 9800 - 9837
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  9800 acttttgcatttaatgtttatctaaagtaaaataaaat 9837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 8898 - 8961
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaataaaat 208  Q
    |||||||||||||  ||||||||||||||||| ||||||||||| |||||| | |||| ||||||    
T  8898 ttaacttaattttc-cctccacacttttgcatttaatgtttatcaaaagtatagtaaagtaaaat 8961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 9909 - 9964
Alignment:
Q  23 taatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||| |||||| ||||    
T  9909 taatctcttacttataaatgttaacccgtctcgctatacttaacctattatgttac 9964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 9910 - 9955
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||||    
T  9910 aatctcttacttataaatgttaacccgtctcgctatacttaaccta 9955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 70; Significance: 2e-31; HSPs: 6)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 29244 - 29143
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| ||||||||| ||| |||||||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||    
T  29244 tacttataaatgttaacccgtctcgctatacttaacctaattttaacctaatttttccctcgacacttttgcatttaatgtttatctaaagtaaaataaa 29145  T
Q  202 at 203  Q
    ||    
T  29144 at 29143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 29244 - 29187
Alignment:
Q  268 tacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttcc 325  Q
    ||||||| |||||||||  |||||||||||||||||||||| ||||||||| ||||||    
T  29244 tacttataaatgttaacccgtctcgctatacttaacctaattttaacctaatttttcc 29187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 29180 - 29143
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  29180 acttttgcatttaatgtttatctaaagtaaaataaaat 29143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 30081 - 30018
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaataaaat 208  Q
    |||||||||||||  ||||||||||||||||| ||||||||||| |||||| | |||| ||||||    
T  30081 ttaacttaattttc-cctccacacttttgcatttaatgtttatcaaaagtatagtaaagtaaaat 30018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 29071 - 29016
Alignment:
Q  23 taatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||| |||||| ||||    
T  29071 taatctcttacttataaatgttaacccgtctcgctatacttaacctattatgttac 29016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 29070 - 29025
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||||    
T  29070 aatctcttacttataaatgttaacccgtctcgctatacttaaccta 29025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 19989332 - 19989231
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| |||| |||| ||| |||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  19989332 tacttataaatgttaacccgtttcgctatacttaacctaattttaacctaattttttcctccacacttttgcttttaatgtttatctaaagtaaaataaa 19989233  T
Q  202 at 203  Q
    ||    
T  19989232 at 19989231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 33007606 - 33007505
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| ||||||||| ||| ||||| |||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  33007606 tacttataaatgttaacccgtctcgctatacttaacttaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaa 33007507  T
Q  202 at 203  Q
    ||    
T  33007506 at 33007505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 1221153 - 1221088
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  1221153 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 1221088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 4109351 - 4109286
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4109351 ctaatttaaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaat 4109286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 24446560 - 24446495
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  24446560 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 24446495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 14366275 - 14366189
Alignment:
Q  110 aatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaa 196  Q
    |||||||| ||||||||   || | |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  14366275 aatgttaacccgtctcgttgtactcaacctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaaataaa 14366189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 35159530 - 35159465
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  35159530 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaataaaat 35159465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 33004479 - 33004420
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  33004479 ttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 33004420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 4897222 - 4897284
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  4897222 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 4897284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 4896590 - 4896654
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||  ||||||||| ||||||||||||||||||||||||||    
T  4896590 ctaattttaacctaatttttccctccatgcttttgcatttaatgtttatctaaagtaaaataaaa 4896654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 19989638 - 19989587
Alignment:
Q  152 attttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  19989638 atttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 19989587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 33320701 - 33320763
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||||||||    
T  33320701 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtaaaataa 33320763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 35158963 - 35158901
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||||||||    
T  35158963 ctaattttaacctaatttttacctccacacttttacatttaatgtttatctaaggtaaaataa 35158901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 14366375 - 14366322
Alignment:
Q  150 taattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  14366375 taatttttccctccactcttttgcatttaatgtttatctaaagtaaaataaaat 14366322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 21078258 - 21078193
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||||||||  |||||| ||||||||| ||||||||||||| |||||||||||||    
T  21078258 ctaattttaacctaatttttctctccacgcttttgcatttaatgtttatctatagtaaaataaaat 21078193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 33320179 - 33320244
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| | |||||| |||||||| || ||||||||||||||||||||||||    
T  33320179 ctaattttaacctaatttttccatccacatttttgcatttattgtttatctaaagtaaaataaaat 33320244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 19987990 - 19987932
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  19987990 ttaacctaatttttccctc-acacttttgcatttaatgtttatctaaagtaaaataaaat 19987932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 1220520 - 1220458
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  1220520 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 1220458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 4108718 - 4108656
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| || ||||||    
T  4108718 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaataa 4108656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 9979348 - 9979410
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  9979348 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 9979410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 14832476 - 14832414
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||||||||||  || |||||||||||||| |||||||||    
T  14832476 ctaattttaacctaatttttacctccacacttttaaatttaatgtttatctaaggtaaaataa 14832414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 260 - 337
Target Start/End: Complemental strand, 19989340 - 19989262
Alignment:
Q  260 aaatcccttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaa-cttttcctccacacctttg 337  Q
    ||||| ||||||||| |||||||||  || ||||||||||||||||||| |||||||||  ||||||||||||| ||||    
T  19989340 aaatctcttacttataaatgttaacccgtttcgctatacttaacctaattttaacctaattttttcctccacacttttg 19989262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 21055145 - 21055077
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatcta---atgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||||||||  |||||||||||||||| ||   |||||||||||||||||||||||||    
T  21055145 ctaattttaacctaatttttctctccacacttttgcatttaatgatgtttatctaaagtaaaataaaat 21055077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 24445927 - 24445865
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  24445927 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 24445865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 33007613 - 33007536
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaactttt-cctccacacctttg 337  Q
    |||| ||||||||| |||||||||  ||||||||||||||||| |||| ||||||||| |||| ||||||||| ||||    
T  33007613 aatctcttacttataaatgttaacccgtctcgctatacttaacttaattttaacctaatttttccctccacacttttg 33007536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 1221132 - 1221088
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  1221132 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 1221088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 4109330 - 4109286
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  4109330 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 4109286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 19989172 - 19989108
Alignment:
Q  14 tactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||| |||||||||||||||||||||| ||||||||||| || ||||||| | |||||| ||||    
T  19989172 tacttaacttaatctcttacttataaatgttaacccatctcgctatacttatcctattatgttac 19989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 19989631 - 19989587
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  19989631 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 19989587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 24446539 - 24446495
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  24446539 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 24446495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 33004464 - 33004420
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  33004464 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 33004420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 33007549 - 33007505
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  33007549 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 33007505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 4896720 - 4896771
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||| ||||    
T  4896720 acttaatatcttacttataaatgttaacccgtcttgcaatacttaacctatt 4896771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 35159362 - 35159303
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| ||||||||| ||||||||| ||||    
T  35159362 tatacttaacctaatctcttacttataaatgttaaaccatcttgctatacttaacctatt 35159303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 337
Target Start/End: Complemental strand, 14366291 - 14366213
Alignment:
Q  260 aaatcccttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaa-cttttcctccacacctttg 337  Q
    ||||| |||||||||||||||||||  |||||| | |||| |||||||| |||||||||  ||||||||||||| ||||    
T  14366291 aaatctcttacttatgaatgttaacccgtctcgttgtactcaacctaattttaacctaattttttcctccacacttttg 14366213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 35159507 - 35159465
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  35159507 tccacacttttgcatttaatgtttatctaaagtaaaataaaat 35159465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 19987969 - 19987932
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  19987969 acttttgcatttaatgtttatctaaagtaaaataaaat 19987932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 14366358 - 14366322
Alignment:
Q  227 cttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||||| ||||||||||||||||    
T  14366358 cttttgcatttaatgtttatctaaagtaaaataaaat 14366322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 19989275 - 19989231
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||    
T  19989275 cctccacacttttgcttttaatgtttatctaaagtaaaataaaat 19989231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 19989473 - 19989417
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaatttt 145  Q
    |||||||||||| |||| |||||||||||||| |||||| ||| ||| |||||||||    
T  19989473 tattatgttacgttacttataaatgttaatccatctcgctatacttagcctaatttt 19989417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 1221030 - 1220971
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  1221030 tatacttaacataatctcttacttataaatgttaatccctcttgctatacttaacctatt 1220971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 4109229 - 4109170
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || |||||| |||||||||||| ||||| |||||||| ||||||||| ||||    
T  4109229 tatacttaacataatctattacttataaatgttaacacatcttgctatacttaacctatt 4109170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 262
Target Start/End: Original strand, 4896619 - 4896654
Alignment:
Q  227 cttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||||||||||||||||| |||||||||||||||    
T  4896619 cttttgcatttaatgtttatctaaagtaaaataaaa 4896654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 21055019 - 21054960
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| ||||||||||||||||||| || |||| || |||||| ||||||||| ||||    
T  21055019 tatacttaacttaatctcttacttatatatgttaatccgtcttgctatacttaacctatt 21054960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 24446437 - 24446378
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  24446437 tatacttaacctaatctcttacttataaatgttaatccctcttgctatacttaacctatt 24446378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 33320302 - 33320361
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||| | ||||||| ||||    
T  33320302 tatacttaacctaatctcttacttataaatgttaacccgtcttgctagacttaacctatt 33320361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 310
Target Start/End: Complemental strand, 35159389 - 35159346
Alignment:
Q  267 ttacttatgaatgttaacatgtctcgctatacttaacctaatct 310  Q
    |||||||| |||||||||  ||||||||||||||||||||||||    
T  35159389 ttacttataaatgttaacccgtctcgctatacttaacctaatct 35159346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 19989529 - 19989463
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||||| ||| || ||| ||||| |||||| ||||    
T  19989529 tatacttaacctaatctcttacttataaatgttaacccgtctcgctatatttaacctattatgttac 19989463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Complemental strand, 19989420 - 19989371
Alignment:
Q  154 tttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||  ||||||||||||| |||||||||||| |||| |||||||||    
T  19989420 tttttccctcacacttttgcatttaatgtttatctcaagtgaaataaaat 19989371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 21078229 - 21078193
Alignment:
Q  227 cttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||||| || |||||||||||||    
T  21078229 cttttgcatttaatgtttatctatagtaaaataaaat 21078193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 33320286 - 33320318
Alignment:
Q  278 tgttaacatgtctcgctatacttaacctaatct 310  Q
    ||||||| |||||||||||||||||||||||||    
T  33320286 tgttaacttgtctcgctatacttaacctaatct 33320318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 145)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 49750695 - 49750599
Alignment:
Q  107 ataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||||||||| ||| |||||||||||||||  |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  49750695 ataaatgttaacccgtctcgctatacttaacctaattttaatctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 49750599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 54094688 - 54094587
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| |||||| || ||| |||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  54094688 tacttataaatgttaacccgtcttgctatacttaacctagttttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaa 54094589  T
Q  202 at 203  Q
    ||    
T  54094588 at 54094587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 49750848 - 49750735
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| ||||||||||||||||||| | ||| ||||| ||||||||||||||  |||||| |||||||||||||| |||||| |||||    
T  49750848 tattatgttacgttacttataaatgttaatccgtctcactatacttaacataattttaacttaa-attttcccccacacttttgcatttaatgtatatct 49750750  T
Q  189 aaagtaaaataaaat 203  Q
    | |||||||||||||    
T  49750749 atagtaaaataaaat 49750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 54093303 - 54093202
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| |||||| |  ||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  54093303 tacttataaatgttaacccgtcttgttatacttaacctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaattaaaataaa 54093204  T
Q  202 at 203  Q
    ||    
T  54093203 at 54093202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 9061242 - 9061307
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9061242 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaat 9061307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 39714129 - 39714194
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39714129 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaat 39714194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 40682534 - 40682434
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||| ||||||||||||| |||| ||||||| || |||||||||    
T  40682534 tacttataaatgttaatccgtctcgctatacttaacctaattttaacctaatttttccct-cacacttttgcatttaatatttatctgaattaaaataaa 40682436  T
Q  202 at 203  Q
    ||    
T  40682435 at 40682434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 203
Target Start/End: Complemental strand, 54094280 - 54094187
Alignment:
Q  110 aatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||| ||||||||  ||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  54094280 aatgttaacccgtctcgttataattaacataattttaaccttattttttcctccacacttttgcatttaatgtttatgtaaagtaaaataaaat 54094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 39405346 - 39405410
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39405346 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaa 39405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 50118700 - 50118764
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50118700 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaa 50118764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 4875807 - 4875737
Alignment:
Q  133 ttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||||||||| ||||||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  4875807 ttaacctaattttaacctaatttttttcttcacacttttgcatttaatgtttatctaaagtaaaataaaat 4875737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 2117490 - 2117425
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  2117490 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 2117425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 47556056 - 47556121
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  47556056 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 47556121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 52801657 - 52801592
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  52801657 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 52801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 3758682 - 3758618
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  3758682 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 3758618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 8988496 - 8988432
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  8988496 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 8988432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 20590361 - 20590297
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  20590361 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 20590297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 22454166 - 22454230
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22454166 taattttaatctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaat 22454230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 24947383 - 24947447
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  24947383 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 24947447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 29713347 - 29713283
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  29713347 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 29713283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 37351396 - 37351332
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  37351396 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 37351332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 43022803 - 43022739
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  43022803 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 43022739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 54093186 - 54093083
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||||||||||||  ||| ||||| |||||||||| |||||||| ||| |||||||||| ||    ||||||||||||||||||||||    
T  54093186 tacttataaatgttaatccgtctcgttatacttaacataattttaacctaatttttcccttcacacttttgaattatttgtttatctaaagtaaaataaa 54093087  T
Q  202 ataa 205  Q
    ||||    
T  54093086 ataa 54093083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 49751027 - 49750962
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||||||    
T  49751027 ctaattttaacctaatttttctctccacacttttgcatttaatgtttatctaaagtaaaataaaat 49750962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 54095339 - 54095238
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| | ||||| | ||| |||||||| ||||||| ||||||||  |||||||| ||||||| || ||||||||||||||||||||||    
T  54095339 tacttataaatgttaacctgtctcactatacttaacctatttttaacctaatttttcactccacacctttgcatttattgtttatctaaagtaaaataaa 54095240  T
Q  202 at 203  Q
    ||    
T  54095239 at 54095238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 8987864 - 8987800
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  8987864 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaataaaa 8987800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 24944667 - 24944731
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  24944667 ctaattttaacctaatttttccctccacacttttgaatttaatgtttatctaaagtaaaataaaa 24944731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 37350764 - 37350700
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  37350764 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaataaaa 37350700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 43023320 - 43023256
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  43023320 ctaattttaacctaatttttctctccacacttttgcatttaatgtttatctaaagtaaaataaaa 43023256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 48809057 - 48809117
Alignment:
Q  143 tttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  48809057 tttaacctaattttttcctccacgcttttgcatttaatgtttatctaaagtaaaataaaat 48809117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 54094566 - 54094470
Alignment:
Q  107 ataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||||||  |||||  ||  ||||| |||||||||| | |||| |||| |||||||||||||| |||||||||||||||||||||||||||    
T  54094566 ataaatgttaatctctctcgttatttttaacataattttaaccttatttgttcccccacacttttgcatttaatgtttatctaaagtaaaataaaat 54094470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 54095046 - 54094987
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  54095046 ttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 54094987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 8987231 - 8987169
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  8987231 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 8987169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 29712729 - 29712667
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  29712729 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 29712667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 43022249 - 43022187
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  43022249 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 43022187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 50033986 - 50033924
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  50033986 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 50033924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 5754886 - 5754821
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||  ||||||||||||||||    
T  5754886 ctaattttaacctaatttttccctccacacttttgcatttaatgtttacttaaagtaaaataaaat 5754821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 49357575 - 49357640
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||||||||| |||| ||||||| ||| |||||||||||||||||||||||||||    
T  49357575 ctaattttaacctaatttttttctccgcacttttccatataatgtttatctaaagtaaaataaaat 49357640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 2116856 - 2116794
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||| ||||||    
T  2116856 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaagtcaaataa 2116794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 17741072 - 17741010
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||  |||||||||||||| |||||||||    
T  17741072 ctaattttaacctaattttttcctccacacttttacaattaatgtttatctaaggtaaaataa 17741010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 37350131 - 37350069
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| ||||||||| |||||||||    
T  37350131 ctaattttaacctaattttttcctccacacttttacatttaatatttatctaaggtaaaataa 37350069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 8531615 - 8531562
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaa 191  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||||||||||    
T  8531615 ctaattttaacctaatattttcctccacacttttgcatttaatgtttatctaaa 8531562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 23632871 - 23632924
Alignment:
Q  150 taattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||||| ||||||||| || |||||||||||||||||||||||||||    
T  23632871 taattttttcctctacacttttgtatttaatgtttatctaaagtaaaataaaat 23632924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 24548715 - 24548653
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||  || |||||||||||||| ||||||||||||||||||||||||||    
T  24548715 ctaattttaacctaatttt--cccccacacttttgcatttaatgtttatctaaagtaaaataaaa 24548653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 46420360 - 46420425
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||||||||  ||| |||||||||||| |||||||||||||||| ||||||||||    
T  46420360 ctaattttaacctaatttttctctctacacttttgcatttaatgtttatctaaagaaaaataaaat 46420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 9888026 - 9888090
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | |||| ||||||| || ||||||||||||||||||||||||||    
T  9888026 ctaattttaacctaatttttccatccatacttttgtatttaatgtttatctaaagtaaaataaaa 9888090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 22454344 - 22454446
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| |||||||||||| ||||| || ||| |||||||||||||          |||||  ||||||||||||| ||||||||||||    
T  22454344 tattatgttacgttacttataaatgttaattcgtcttgctatacttaacctaatttt----------tttcc--cacacttttgcatttaatgtttatct 22454431  T
Q  189 aaagtaaaataaaat 203  Q
    |||||||||||||||    
T  22454432 aaagtaaaataaaat 22454446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 3758559 - 3758500
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  3758559 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 3758500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 20590238 - 20590179
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  20590238 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 20590179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 24947506 - 24947565
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  24947506 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 24947565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 43023195 - 43023136
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  43023195 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 43023136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 50118823 - 50118882
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  50118823 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 50118882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 54093378 - 54093319
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| ||||||||  |||||||||||||||| |||| ||||||||||||||||||||||    
T  54093378 ttaacctaatttttcactccacacttttgcatttaatctttatctaaagtaaaataaaat 54093319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 54094362 - 54094304
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||| |||||| |||||||||| |||||||||||||||||||||||||||    
T  54094362 ttaacctaatttttccctcca-acttttgcatgtaatgtttatctaaagtaaaataaaat 54094304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 54094763 - 54094704
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| ||||||||  |||||||||||||||| |||||||||||||||||| ||||||||    
T  54094763 ttaacctaatttttcactccacacttttgcatttaatgtttatctaaagtataataaaat 54094704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 9888659 - 9888721
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| ||||||||| ||||| |||||| ||| |||||||||||||| |||||||||    
T  9888659 ctaattttaacctaatttttttctccagacttttacatttaatgtttatctaaggtaaaataa 9888721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 12682064 - 12682126
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| || ||||||    
T  12682064 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaataa 12682126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 24948016 - 24948078
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||| || |||||||||    
T  24948016 ctaattttaacctaatttttccctccacacttttacatttaatgtttatcgaaggtaaaataa 24948078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 39714806 - 39714868
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  39714806 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 39714868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 42350964 - 42351030
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||| ||||||||| |||||| ||||    
T  42350964 tatacttaacctaatctcttacttataaatgttaacccgtcttgctatacttaacctattatgttac 42351030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 47556687 - 47556749
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||| ||| |||||||||    
T  47556687 ctaattttaacctaatttttccctccacacttttacatttaatgtttatataaggtaaaataa 47556749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 52801024 - 52800962
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  52801024 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 52800962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 54094971 - 54094870
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||| ||||||||||||  |||  |||| |||||||||| |||||||  |||||||||||||| ||    ||||||||||||||||||||||    
T  54094971 tacttataaatgctaatccgtctcgttatacataacataattttaacctaattttc-cctccacacttttgaattatttgtttatctaaagtaaaataaa 54094873  T
Q  202 ata 204  Q
    |||    
T  54094872 ata 54094870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 54095339 - 54095269
Alignment:
Q  268 tacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttc-ctccacacctttg 337  Q
    ||||||| ||||||||| |||||| |||||||||||||| | ||||||||| ||||| |||||||||||||    
T  54095339 tacttataaatgttaacctgtctcactatacttaacctatttttaacctaatttttcactccacacctttg 54095269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 42350842 - 42350907
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||| |||| |||  |||||||||||| |||||||||||||||| ||||||||||    
T  42350842 ctaattttaacctaaattttccctatacacttttgcatttaatgtttatctaaagaaaaataaaat 42350907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 2117469 - 2117425
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  2117469 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 2117425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 5754865 - 5754821
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  5754865 cctccacacttttgcatttaatgtttacttaaagtaaaataaaat 5754821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 9061263 - 9061307
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  9061263 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 9061307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 22454186 - 22454230
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  22454186 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 22454230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 39714150 - 39714194
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  39714150 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 39714194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 47556077 - 47556121
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  47556077 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 47556121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 49750643 - 49750599
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  49750643 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 49750599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 52801636 - 52801592
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  52801636 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 52801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 54094231 - 54094187
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  54094231 cctccacacttttgcatttaatgtttatgtaaagtaaaataaaat 54094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 54094631 - 54094587
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  54094631 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 54094587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 54095031 - 54094987
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  54095031 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 54094987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 2117366 - 2117307
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  2117366 tatacttaacataatctcttacttataaatgttaacccgtcttgctatacttaacctatt 2117307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 3758661 - 3758618
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  3758661 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 3758618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 4875669 - 4875614
Alignment:
Q  23 taatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||||||||||||||| ||||||| | |||| |||||||||||||||| ||||    
T  4875669 taatctcttacttataaatgttaacccgttttgctatacttaacatattatgttac 4875614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 8988373 - 8988314
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  8988373 tatacttaatttaatctcttacttataaatgttaacccgtcttgccatacttaacctatt 8988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 8988475 - 8988432
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  8988475 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 8988432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 20590340 - 20590297
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  20590340 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 20590297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 24947404 - 24947447
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  24947404 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 24947447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 29713217 - 29713166
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||| ||||    
T  29713217 acttaatatcttacttataaatgttaacccgtcttgcaatacttaacctatt 29713166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 29713326 - 29713283
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  29713326 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 29713283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 37351273 - 37351214
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  37351273 tatacttaatttaatctcttacttataaatgttaacccgtcttgccatacttaacctatt 37351214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 37351375 - 37351332
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  37351375 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 37351332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 39405367 - 39405410
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  39405367 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 39405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 40682536 - 40682477
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttcc 325  Q
    ||||||||| ||||||||   |||||||||||||||||||||| ||||||||| ||||||    
T  40682536 cttacttataaatgttaatccgtctcgctatacttaacctaattttaacctaatttttcc 40682477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 43022679 - 43022620
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| |||||||  ||||| ||||||||| ||||    
T  43022679 tatacttaacttaatctcttacttataaatgttaacccgccttgctatacttaacctatt 43022620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 43022782 - 43022739
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  43022782 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 43022739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 47556179 - 47556238
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||| | ||||||||| ||||    
T  47556179 tatacttaacttaatctcttacttataaatgttaacccgtctttctatacttaacctatt 47556238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 49751005 - 49750962
Alignment:
Q  220 ctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||    
T  49751005 ctccacacttttgcatttaatgtttatctaaagtaaaataaaat 49750962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 50118721 - 50118764
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  50118721 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 50118764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 337
Target Start/End: Complemental strand, 54093362 - 54093233
Alignment:
Q  220 ctccaaacttttgcatttaatgtttatttaaagtaaaataaaat-----------cccttacttatgaatgttaacatgtctcgctatacttaacctaat 308  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||           | ||||||||| |||||||||  |||| | |||||||||||||||    
T  54093362 ctccacacttttgcatttaatctttatctaaagtaaaataaaattatgttcctaactcttacttataaatgttaacccgtcttgttatacttaacctaat 54093263  T
Q  309 cttaacctaactttt-cctccacacctttg 337  Q
     ||||||||| |||| ||||||||| ||||    
T  54093262 tttaacctaatttttccctccacacttttg 54093233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 54093416 - 54093369
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaacctaat 308  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||||||    
T  54093416 aatctcttgcttataaatgttaacatgtctcgctatacttaacctaat 54093369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 337
Target Start/End: Complemental strand, 54094747 - 54094618
Alignment:
Q  220 ctccaaacttttgcatttaatgtttatttaaagtaaaataaaat-----------cccttacttatgaatgttaacatgtctcgctatacttaacctaat 308  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||           | ||||||||| |||||||||  |||| ||||||||||||||| |    
T  54094747 ctccacacttttgcatttaatgtttatctaaagtataataaaattatgttcataactcttacttataaatgttaacccgtcttgctatacttaacctagt 54094648  T
Q  309 cttaacctaactttt-cctccacacctttg 337  Q
     ||||||||| |||| ||||||||| ||||    
T  54094647 tttaacctaatttttccctccacacttttg 54094618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 43023298 - 43023256
Alignment:
Q  220 ctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||| ||||||||||||||||||||| |||||||||||||||    
T  43023298 ctccacacttttgcatttaatgtttatctaaagtaaaataaaa 43023256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 46104931 - 46104869
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| || ||||||    
T  46104931 ctaattttaacctaatttttccctccatacttttacatttaatgtttatctaaggtcaaataa 46104869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 46105721 - 46105675
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgttt 184  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  46105721 ctaattttaacctaatttttccctccacacttttgcatttaatgttt 46105675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 48809175 - 48809241
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||  ||||||||| |||||| ||||    
T  48809175 tatacttaacataatctcttacttataaatgttaacccgtcttgatatacttaacctattatgttac 48809241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 49357697 - 49357763
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| |||||||||||||||||||||| ||||| | ||| || ||||||||| |||||| ||||    
T  49357697 tatacttaacttaatctcttacttataaatgttaactcgtctcgctatacttaacctattatattac 49357763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 54095152 - 54095094
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||| ||||||||  ||||| |||||||||| ||||||||||||||||||||| ||||    
T  54095152 ttaacctaatttttcactccatacttttgcatttaatgtttatctaaagtaaaacaaaa 54095094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 4875774 - 4875737
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  4875774 acttttgcatttaatgtttatctaaagtaaaataaaat 4875737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 8987841 - 8987800
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  8987841 tccacacttttgcatttaatgtttatctaaagtaaaataaaa 8987800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 22454409 - 22454446
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  22454409 acttttgcatttaatgtttatctaaagtaaaataaaat 22454446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 37350741 - 37350700
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  37350741 tccacacttttgcatttaatgtttatctaaagtaaaataaaa 37350700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 39405469 - 39405522
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaa 65  Q
    ||||||| |||||||||||||||||||||| |||| || |||||| ||||||||    
T  39405469 tatacttaacttaatctcttacttataaatattaaaccgtcttgctatacttaa 39405522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 54094507 - 54094470
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  54094507 acttttgcatttaatgtttatctaaagtaaaataaaat 54094470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 54095184 - 54095143
Alignment:
Q  267 ttacttatgaatgttaacatgtctcgctatacttaacctaat 308  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  54095184 ttacttataaatgttaacctgtctcgctatacttaacctaat 54095143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 23632979 - 23633035
Alignment:
Q  10 attatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaac 66  Q
    ||||||||| || |||| |||||||||||||| ||||||||||| || |||||||||    
T  23632979 attatacttaacctaatttcttacttataaatgttaacccatctcgctatacttaac 23633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 24548689 - 24548653
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||||||||||||||||||| |||||||||||||||    
T  24548689 acttttgcatttaatgtttatctaaagtaaaataaaa 24548653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 48809081 - 48809117
Alignment:
Q  227 cttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||||| ||||||||||||||||    
T  48809081 cttttgcatttaatgtttatctaaagtaaaataaaat 48809117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 54093246 - 54093202
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| |||| |||||||||||    
T  54093246 cctccacacttttgcatttaatgtttatctaaattaaaataaaat 54093202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 8987733 - 8987682
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||||||||| |||||||| ||||||| |||||| ||||||||| ||||    
T  8987733 acttaatctcttatttataaatgttaacccgtcttgctatacttaacctatt 8987682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 23633031 - 23633090
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||| | |||||||| |||||||| | ||||||||||||||| |||||||||    
T  23633031 ttaacctaatttctccctccacagttttgcattttatgtttatctaaagtgaaataaaat 23633090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 24539019 - 24539062
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaatttt 145  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||    
T  24539019 tacttataaatgttaatccgtctcgctatatttaacctaatttt 24539062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 24548586 - 24548535
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    |||||||||||||||||||||| ||||||| ||||||  |||||||| ||||    
T  24548586 acttaatctcttacttataaatgttaacccgtcttgctgtacttaacctatt 24548535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 24944688 - 24944731
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||| ||||||||||||| |||||||||||||||    
T  24944688 cctccacacttttgaatttaatgtttatctaaagtaaaataaaa 24944731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 24944790 - 24944849
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| ||||||||||| |||||||||| ||||| | |||||| ||||||||| ||||    
T  24944790 tatacttaacttaatctctcacttataaatgttaactcgtcttgctatacttaacctatt 24944849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 39405966 - 39406016
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatcta 189  Q
    ||||||||||| ||||||| |||||||||||||| ||| |||||||||||||    
T  39405966 ctaattttaacctaatttt-tcctccacacttttacatttaatgtttatcta 39406016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #122
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 39714297 - 39714356
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  39714297 tatacttaacctaatctcttacttataaatgttaatccgtcttgctatacttaacctatt 39714356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #123
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 337
Target Start/End: Complemental strand, 49750697 - 49750630
Alignment:
Q  271 ttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaactttt-cctccacacctttg 337  Q
    |||| |||||||||  |||||||||||||||||||||| |||| |||| |||| ||||||||| ||||    
T  49750697 ttataaatgttaacccgtctcgctatacttaacctaattttaatctaatttttccctccacacttttg 49750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #124
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 52801534 - 52801475
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  52801534 tatacttaacctaatctcttacttataaatgttaatccctcttgctatacttaacctatt 52801475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #125
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 23633149 - 23633215
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    |||||||  |||||| |||||||||||||| ||||||| ||| || ||||||||| |||||| ||||    
T  23633149 tatacttagcttaatgtcttacttataaatgttaacccgtctcgctatacttaacctattatgttac 23633215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #126
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 39714252 - 39714306
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaac 66  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| |||||||||    
T  39714252 tatacttaacctaatctcttacttataaatgttaatccgtcttgctatacttaac 39714306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #127
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 49750541 - 49750475
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| |||  |||||||||||||||||  |||||| |||||| ||||||||| |||||| ||||    
T  49750541 tatacttaactgtatctcttacttataaatgataacccgtcttgctatacttaacctattatgttac 49750475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #128
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 49750904 - 49750850
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaac 66  Q
    ||||||| || ||||||||||||||||||||||||| | ||| || |||||||||    
T  49750904 tatacttaacctaatctcttacttataaatcttaactcgtctcgctatacttaac 49750850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #129
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 54094342 - 54094304
Alignment:
Q  225 aacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  54094342 aacttttgcatgtaatgtttatctaaagtaaaataaaat 54094304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #130
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 54095136 - 54095094
Alignment:
Q  220 ctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||    
T  54095136 ctccatacttttgcatttaatgtttatctaaagtaaaacaaaa 54095094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #131
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 9888049 - 9888090
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||| ||||||||||||| |||||||||||||||    
T  9888049 tccatacttttgtatttaatgtttatctaaagtaaaataaaa 9888090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #132
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 22454300 - 22454345
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| ||| |||||||||||| ||||||||||||||    
T  22454300 aatctcttacttataaatcttaacatgtctcactatacttaaccta 22454345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #133
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 23632887 - 23632924
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  23632887 acttttgtatttaatgtttatctaaagtaaaataaaat 23632924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #134
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 24539072 - 24539108
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||||||||||| |||||||||||    
T  24539072 acttttgcatttaatgtttatttaaa-taaaataaaat 24539108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #135
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 40682377 - 40682316
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattat 73  Q
    ||||||| || ||||||||||||||||||| |||| || ||| || ||||||||| ||||||    
T  40682377 tatacttaacctaatctcttacttataaatgttaatccgtctcgctatacttaacctattat 40682316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #136
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 42350870 - 42350907
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  42350870 acttttgcatttaatgtttatctaaagaaaaataaaat 42350907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #137
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 46105532 - 46105499
Alignment:
Q  230 ttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||| ||||||||||||||||    
T  46105532 ttgcatttaatgtttatctaaagtaaaataaaat 46105499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #138
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 46105532 - 46105499
Alignment:
Q  170 ttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||| |||||||||||||||||||||||||||    
T  46105532 ttgcatttaatgtttatctaaagtaaaataaaat 46105499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #139
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 46420388 - 46420425
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  46420388 acttttgcatttaatgtttatctaaagaaaaataaaat 46420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #140
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 49357709 - 49357754
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||||    
T  49357709 aatctcttacttataaatgttaactcgtctcgctatacttaaccta 49357754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #141
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 9888157 - 9888201
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  9888157 acttaatctcttatttataaatgttaacccgtcttgctatactta 9888201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #142
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 23633166 - 23633206
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    ||||||||| |||||||||  ||||||||||||||||||||    
T  23633166 cttacttataaatgttaacccgtctcgctatacttaaccta 23633206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #143
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 37350633 - 37350589
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  37350633 acttaatctcttatttataaatgttaacccgtcttgctatactta 37350589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #144
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 54094290 - 54094218
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacc-taacttttcctccacacctttg 337  Q
    |||||||||||||||||||  |||||| |||| ||||| |||| |||||| ||  ||||||||||||| ||||    
T  54094290 cttacttatgaatgttaacccgtctcgttataattaacataattttaaccttattttttcctccacacttttg 54094218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #145
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 54094410 - 54094358
Alignment:
Q  14 tactttacttaatctcttacttataaatcttaacccatcttgcaatacttaac 66  Q
    ||||| |||||||||||||||||||||| ||||| | |||||| || ||||||    
T  54094410 tacttaacttaatctcttacttataaatgttaactcgtcttgccatgcttaac 54094358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 62; Significance: 1e-26; HSPs: 5)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 17522 - 17623
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| ||||||||| ||| |||||| ||||||||| || | ||| ||||||||||||||||| |||||||||||||||||||||||||    
T  17522 tacttataaatgttaacccgtctcgctatacttaacccaattttaacctattgtttccctccacacttttgcatttaatgtttatctaaagtaaaataaa 17621  T
Q  202 at 203  Q
    ||    
T  17622 at 17623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 17365 - 17455
Alignment:
Q  113 gttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| ||||||||| ||| |||||||||||||||| || | ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  17365 gttaacccgtctcgctatacttaacctaattttaacatattgtttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 17455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 17411 - 17455
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  17411 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 17455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 17579 - 17623
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  17579 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 17623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 17520 - 17571
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaacctaatcttaaccta 317  Q
    ||||||||| |||||||||  |||||||||||||||||| ||| ||||||||    
T  17520 cttacttataaatgttaacccgtctcgctatacttaacccaattttaaccta 17571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 98)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 27854171 - 27854070
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| |||||||||||  | |||||  ||| ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  27854171 tacttataaatgttaactcatctcgttatacttaacctaattttaacttaatttttccctccacacctttgcatttaatgtttatctaaagtaaaataaa 27854072  T
Q  202 at 203  Q
    ||    
T  27854071 at 27854070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 4465097 - 4465162
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  4465097 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 4465162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 41157944 - 41157879
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  41157944 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 41157879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 41532460 - 41532525
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  41532460 ctaattttaacctaattttttccttcacacttttgcatttaatgtttatctaaagtaaaataaaat 41532525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 1944484 - 1944420
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  1944484 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 1944420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 8161164 - 8161228
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  8161164 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 8161228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 8762308 - 8762244
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  8762308 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 8762244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 9473532 - 9473468
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  9473532 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 9473468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 25834744 - 25834808
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  25834744 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 25834808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 32845871 - 32845807
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32845871 ctaattttaacctaatcttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaa 32845807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 36777888 - 36777824
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  36777888 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 36777824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 44381413 - 44381478
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  44381413 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaagtaaaataaaat 44381478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 1943741 - 1943677
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  1943741 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaataaaa 1943677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 7390615 - 7390551
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||| |||||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  7390615 taattttaacctaatttttccctccacacttttgtatttaatgtttatctaaagtaaaataaaat 7390551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 8761676 - 8761612
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  8761676 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaataaaa 8761612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 25835376 - 25835440
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  25835376 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaataaaa 25835440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 32845128 - 32845064
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  32845128 ctaattttaacctaatttttccatccacacttttgcatttaatgtttatctaaagtaaaataaaa 32845064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 28528801 - 28528742
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  28528801 taattttaacgtaattttttcctccacacttttgcatttaatgtttatctaaagtcaaat 28528742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 8761043 - 8760981
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  8761043 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 8760981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 25836009 - 25836071
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  25836009 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 25836071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 32844493 - 32844431
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  32844493 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 32844431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 12761532 - 12761467
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||||||||  ||| |||||||||||| |||||||||||||||||||||||||||    
T  12761532 ctaattttaacctaatttttcgctctacacttttgcatttaatgtttatctaaagtaaaataaaat 12761467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 25619403 - 25619468
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| |||||||| |||||||| ||||||||||||| |||||||||||||    
T  25619403 ctaattttaacctaatttttccctccacaattttgcatttaatgtttatctagagtaaaataaaat 25619468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 34893397 - 34893332
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||||||    
T  34893397 ctaattttaacctaatttttccctctacacttttgcatttaatgtttatttaaagtaaaataaaat 34893332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 8161888 - 8161952
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | ||||||||| ||||| ||||||||||||||||||||||||||    
T  8161888 ctaattttaacctaatttttccatccacacttctgcatttaatgtttatctaaagtaaaataaaa 8161952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 32846504 - 32846440
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||||||||    
T  32846504 ctaattttaacctaatttttccctccacactttttcatttaatatttatctaaagtaaaataaaa 32846440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 1943108 - 1943046
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||  |||||||||    
T  1943108 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctacggtaaaataa 1943046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 4465731 - 4465793
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||| ||||||    
T  4465731 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaagtcaaataa 4465793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 8162521 - 8162583
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||| ||||||||||||||||| ||| |||||||||||||| |||||||||    
T  8162521 ctaattttaacctaatattttcctccacacttttacatttaatgtttatctaaggtaaaataa 8162583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 24254791 - 24254852
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  24254791 ctaattttaacctaattttt-cctcctcacttttgcatttaatgtttatctaaagtaaaataa 24254852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 41157322 - 41157260
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||||||||    
T  41157322 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtaaaataa 41157260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 41533093 - 41533155
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||||||||    
T  41533093 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtaaaataa 41533155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 41978254 - 41978192
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| ||||||||||||||| |||||| ||| |||||||||||||| |||||||||    
T  41978254 ctaattttaacctaattttttcctccatacttttacatttaatgtttatctaaggtaaaataa 41978192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 44382034 - 44382096
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||||||||    
T  44382034 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtaaaataa 44382096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 24250447 - 24250511
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||  |||||||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  24250447 ctaattttaatctaatttttccctccacacttttgcatttaatgtttatct-aagtaaaataaaat 24250511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 28528281 - 28528204
Alignment:
Q  121 gtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    ||||||| ||| | |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||| ||| ||||    
T  28528281 gtctcgctatactaaacctaattttaacataatttttccctccacatttttgcatttaatgtttatctagagtcaaat 28528204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 24254974 - 24255030
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaatttt 145  Q
    |||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||||    
T  24254974 tattatgttacgttacttataaatgttaatccgtctcgctatacttaacctaatttt 24255030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 28528967 - 28528907
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||| ||||    
T  28528967 ctaattttaacataattttttccttcacacttttgcatttaatgtttacctaaagtcaaat 28528907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 12761409 - 12761350
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  12761409 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 12761350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 15096945 - 15096886
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| ||||||||  ||| |||||||||||| |||||||||||||||||||||||||||    
T  15096945 ttaacctaatttttctctctacacttttgcatttaatgtttatctaaagtaaaataaaat 15096886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 28528099 - 28528036
Alignment:
Q  135 aacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    |||||||||||||| |||||||| ||| ||||||||||||| |||||||||||| |||| ||||    
T  28528099 aacctaattttaacataatttttcccttcacacttttgcatttaatgtttatctgaagtcaaat 28528036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 28528465 - 28528402
Alignment:
Q  135 aacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    |||||||||||||| ||||| || ||| ||||||||||||| ||||||||||||||||| ||||    
T  28528465 aacctaattttaacataattcttcccttcacacttttgcatttaatgtttatctaaagtcaaat 28528402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 25345293 - 25345231
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| || ||||||    
T  25345293 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaataa 25345231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 25620040 - 25620102
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| || ||||||    
T  25620040 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaataa 25620102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 34893274 - 34893208
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||| ||||||||| |||||| ||||    
T  34893274 tatacttaacataatctcttacttataaatgttaacccgtcttgctatacttaacctattatgttac 34893208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 34893369 - 34893332
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34893369 acttttgcatttaatgtttatttaaagtaaaataaaat 34893332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 4465118 - 4465162
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  4465118 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 4465162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 28527928 - 28527880
Alignment:
Q  150 taattttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  28527928 taattttttccttcacacttttgcatttaatgtttatctaaagtcaaat 28527880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 41157923 - 41157879
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  41157923 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 41157879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 1944361 - 1944302
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  1944361 tatacttaatttaatctcttacttataaatgttaacccgtcttgccatacttaacctatt 1944302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 1944463 - 1944420
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  1944463 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 1944420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 4465221 - 4465280
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  4465221 tatacttaacataatctcttacttataaatgttaacccgtcttgctatacttaacctatt 4465280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 8161185 - 8161228
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  8161185 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 8161228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 8762185 - 8762126
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  8762185 tatacttaatttaatctcttacttataaatgttaacccgtcttgccatacttaacctatt 8762126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 8762287 - 8762244
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  8762287 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 8762244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 9473409 - 9473350
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| | |||| ||||||||| ||||    
T  9473409 tatacttaacttaatctcttacttataaatgttaacccgtgttgctatacttaacctatt 9473350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 9473511 - 9473468
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  9473511 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 9473468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 25834765 - 25834808
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  25834765 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 25834808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 25834867 - 25834926
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  25834867 tatacttaatttaatctcttacttataaatgttaacccgtcttgccatacttaacctatt 25834926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 28527772 - 28527713
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    |||||||||| ||||||||  ||||||||||||| || ||||||||||||||||| ||||    
T  28527772 taattttaacgtaatttttctctccacacttttgtatttaatgtttatctaaagttaaat 28527713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 32845748 - 32845689
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  32845748 tatacttaatttaatctcttacttataaatgttaacccgtcttgccatacttaacctatt 32845689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 32845850 - 32845807
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  32845850 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 32845807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 36777765 - 36777706
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||| ||| |||||| ||||||||| ||||    
T  36777765 tatacttaacttaatctcttacttataaatgttagcccgtcttgctatacttaacctatt 36777706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 36777867 - 36777824
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  36777867 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 36777824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 41157821 - 41157762
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| ||||||||| ||||||||| ||||    
T  41157821 tatacttaacctaatctcttacttataaatgttaaaccatcttgctatacttaacctatt 41157762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 41532583 - 41532642
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  41532583 tatacttaacataatctcttacttataaatgttaacccgtcttgctatacttaacctatt 41532642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 24254918 - 24254984
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||||| ||| || ||||||||| |||||| ||||    
T  24254918 tatacttaacctaatctcttacttataaatgttaacccgtctcgctatacttaacctattatgttac 24254984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 25615767 - 25615829
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| || ||||| ||||||||||||| ||| |||||||||||||| || ||||||    
T  25615767 ctaattttaacctagtttttccctccacacttttacatttaatgtttatctaaggtcaaataa 25615829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 27854013 - 27853947
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| |||||| ||||    
T  27854013 tatacttaacataatctcttacttataaatgttaatccgtcttgctatacttaacctattatgttac 27853947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 28528634 - 28528577
Alignment:
Q  140 aattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaat 198  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||| |||||||| ||||    
T  28528634 aattttaacctaattttt-cctccacacttttgcatttaatgtttctctaaagtcaaat 28528577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 1943718 - 1943677
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  1943718 tccacacttttgcatttaatgtttatctaaagtaaaataaaa 1943677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 8761653 - 8761612
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  8761653 tccacacttttgcatttaatgtttatctaaagtaaaataaaa 8761612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 12761504 - 12761467
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  12761504 acttttgcatttaatgtttatctaaagtaaaataaaat 12761467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 15096923 - 15096886
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15096923 acttttgcatttaatgtttatctaaagtaaaataaaat 15096886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 24255039 - 24255076
Alignment:
Q  166 acttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24255039 acttttgcatttaatgtttatctaaagtaaaataaaat 24255076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 24255039 - 24255076
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  24255039 acttttgcatttaatgtttatctaaagtaaaataaaat 24255076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 25835399 - 25835440
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  25835399 tccacacttttgcatttaatgtttatctaaagtaaaataaaa 25835440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 32845105 - 32845064
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  32845105 tccacacttttgcatttaatgtttatctaaagtaaaataaaa 32845064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 41532488 - 41532525
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  41532488 acttttgcatttaatgtttatctaaagtaaaataaaat 41532525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 7390595 - 7390551
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||    
T  7390595 cctccacacttttgtatttaatgtttatctaaagtaaaataaaat 7390551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 27854114 - 27854070
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| || |||||||||||||||||| ||||||||||||||||    
T  27854114 cctccacacctttgcatttaatgtttatctaaagtaaaataaaat 27854070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 27854173 - 27854101
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaactttt-cctccacacctttg 337  Q
    ||||||||| |||||||||   ||||| ||||||||||||||| ||||| ||| |||| ||||||||||||||    
T  27854173 cttacttataaatgttaactcatctcgttatacttaacctaattttaacttaatttttccctccacacctttg 27854101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 44381434 - 44381478
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||| |||||||||||||| ||||||||||||||||    
T  44381434 cctccacacttttacatttaatgtttatctaaagtaaaataaaat 44381478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 7390489 - 7390430
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  7390489 tatacttaacataatctcttacttataaatgttaatccgtcttgctatacttaacctatt 7390430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 25835507 - 25835558
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||||||||| |||||||| ||||||| |||||| ||||||||| ||||    
T  25835507 acttaatctcttatttataaatgttaacccgtcttgctatacttaacctatt 25835558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 28528674 - 28528603
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttcctccacacctttg 337  Q
    ||||||||| ||  ||||| |||||||||||||| || | ||| ||||||||| ||||||||||||| ||||    
T  28528674 cttacttataaagcttaacctgtctcgctatactaaatcgaattttaacctaatttttcctccacacttttg 28528603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 32846381 - 32846322
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||  ||||||||| ||||    
T  32846381 tatacttaatttaatctcttacttataaatgttaacccgtcttgtcatacttaacctatt 32846322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 44381536 - 44381595
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||||||| |||| | ||||||||| ||||    
T  44381536 tatacttaacataatctcttacttataaatgttaacccgtcttactatacttaacctatt 44381595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 7389980 - 7389918
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||||||| || ||| |||||| ||||||| || ||||||    
T  7389980 ctaattttaacctaatttttccctccacactcttacatttaatgtgtatctaaggtcaaataa 7389918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 260
Target Start/End: Original strand, 24254818 - 24254852
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataa 260  Q
    ||||||||||||||||||||| |||||||||||||    
T  24254818 acttttgcatttaatgtttatctaaagtaaaataa 24254852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 8161911 - 8161952
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| |||| |||||||||||||||| |||||||||||||||    
T  8161911 tccacacttctgcatttaatgtttatctaaagtaaaataaaa 8161952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 24254930 - 24254975
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||||    
T  24254930 aatctcttacttataaatgttaacccgtctcgctatacttaaccta 24254975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 1943610 - 1943566
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  1943610 acttaatctcttatttataaatgttaacccgtcttgctatactta 1943566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 8162019 - 8162063
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  8162019 acttaatctcttatttataaatgttaacccgtcttgctatactta 8162063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 8761545 - 8761501
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  8761545 acttaatctcttatttataaatgttaacccgtcttgctatactta 8761501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 24250468 - 24250511
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||    
T  24250468 cctccacacttttgcatttaatgtttatct-aagtaaaataaaat 24250511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 25619424 - 25619468
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| | ||||||||||||||||||| || |||||||||||||    
T  25619424 cctccacaattttgcatttaatgtttatctagagtaaaataaaat 25619468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 32844996 - 32844952
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  32844996 acttaatctcttatttataaatgttaacccgtcttgctatactta 32844952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 51656992 - 51657098
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| ||| ||||||||||||||||| ||| |||||||||||||||||||||||        |||||||||||| ||||||||||||    
T  51656992 tattatgttacgttacttatagatgttaatccgtctcgctatacttaacctaattttaacttaattt--------acacttttgcatttaatgtttatct 51657083  T
Q  189 aaagtaaaataaaat 203  Q
    |||||||||||||||    
T  51657084 aaagtaaaataaaat 51657098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 35856192 - 35856128
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35856192 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaa 35856128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 9764642 - 9764577
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  9764642 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 9764577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 11586015 - 11586116
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| |||||||||||  |||||||  ||| |||||||||||||||| |||||||| ||||||||||||| ||| |||| |||||||||| |||||||||    
T  11586015 tacttataaatgttaactcgtctcgttatacttaacctaattttaacctaatttttccctccacacttttacatttaatatttatctaaaataaaataaa 11586114  T
Q  202 at 203  Q
    ||    
T  11586115 at 11586116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 13495534 - 13495633
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||| ||||||||||| |||| |  | ||| |||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  13495534 tacttataaatgttaacccgtttaactatacttaacctaatttaaacctaatttttccctccacacttttgcatttaatgtttatctaaattaaaataaa 13495633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 9772877 - 9772812
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| |||||| |||||||||| |||||||||||||||||||||||||||    
T  9772877 ctaattttaacctaatttttccctccaaacttttgcatttaatgtttatctaaagtaaaataaaat 9772812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 55291137 - 55291202
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  55291137 ctaattttaacctaatttttcccttcacacttttgcatttaatgtttatctaaagtaaaataaaat 55291202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 26101412 - 26101476
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    |||||||||||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||    
T  26101412 ctaattttaacttaatttttccctttacacttttgcatttaatgtttatctaaagtaaaataaaa 26101476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 29529494 - 29529558
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  29529494 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaagaaaa 29529558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 8234915 - 8234974
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  8234915 ttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 8234974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 11585887 - 11585946
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  11585887 ttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 11585946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 19361992 - 19362055
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    |||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  19361992 taattttaacctaatttttccctctacacttttgcatttaatgtttatctaaagtaaaataaaa 19362055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 19368072 - 19368135
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    |||||||||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||||    
T  19368072 taattttaacctaatttttccctctacacttttgcatttaatgtttatctaaagtaaaataaaa 19368135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 35855560 - 35855497
Alignment:
Q  137 cctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    |||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  35855560 cctaattttaacataattttttcctccacacttttacatttaatgtttatctaaggtaaaataa 35855497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 8396053 - 8395988
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| | ||||||||||||||| |||||||||||||| ||||||||||||    
T  8396053 ctaattttaacctaatttttccttccacacttttgcatttaatgtttatctaaggtaaaataaaat 8395988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 18684949 - 18684884
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||  ||||||||||||||||    
T  18684949 ctaattttaacctaatttttccctccacacttttgcatttaatgtttacttaaagtaaaataaaat 18684884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 51656813 - 51656878
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| | ||||||||||||||| |||||||||||| ||||||||||||||    
T  51656813 ctaattttaacctaatttttccttccacacttttgcatttaatgtttatctgaagtaaaataaaat 51656878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 19361367 - 19361431
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||  ||||||||||| ||||||||||||||    
T  19361367 ctaattttaacctaatttttccctccacacttttgcagttaatgtttatcaaaagtaaaataaaa 19361431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 38362615 - 38362683
Alignment:
Q  118 tccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttat 186  Q
    ||||||||||  || |||||||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  38362615 tccgtctcgctgtacttaacctaattttaacttaatttttctctccacacttttgcatttaatgtttat 38362683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 46487595 - 46487498
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| ||| |||||| |||||||||| ||| ||||| |||||||||| |||  ||||||  ||||||||||||| ||||||||||||    
T  46487595 tattatgttacgttacttatagatgttactccgtctcgctatacttaacttaattttaacctaa--ttttccctcacacttttgcatttaatgtttatct 46487498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 39093845 - 39093786
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||  ||||||||||||||||| |||||||||||||||||||||||||||    
T  39093845 ttaacctaattttcccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 39093786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 26777178 - 26777240
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||||| || ||||||    
T  26777178 ctaattttaacctaattttttcctccacacttttacatttaatgtttatctaaggtcaaataa 26777240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 39093334 - 39093272
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||||||||    
T  39093334 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtaaaataa 39093272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 52842595 - 52842533
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||||| |||||||| |||||||||||||| |||||||||    
T  52842595 ctaattttaacctaatttttccctccacaattttgcatttaatgtttatctaaggtaaaataa 52842533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 55294027 - 55294089
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||||||||    
T  55294027 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtaaaataa 55294089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 3753351 - 3753451
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||||||||||||||| || ||| |  ||| ||||| |||||||||  ||||||| ||||||| |||| ||||| |||||||||| ||||||||||||||    
T  3753351 tactcataaatgttaacccatcttgatatacttaacttaattttaatctaatttt-tcctccatacttatgcatttaatgtttatttaaagtaaaataaa 3753449  T
Q  202 at 203  Q
    ||    
T  3753450 at 3753451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 5557609 - 5557674
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| ||||||| |||||||||||||| |||  ||||||||| ||||||||||||||||    
T  5557609 ctaattttaacctaattttctcctccacacttttccattcaatgtttatataaagtaaaataaaat 5557674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 9764764 - 9764705
Alignment:
Q  143 tttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||||||    
T  9764764 tttaacctaatttttctctccacacttttgcat-taatgtttatctaaagtaaaataaaat 9764705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 9772856 - 9772812
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  9772856 cctccaaacttttgcatttaatgtttatctaaagtaaaataaaat 9772812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 46487773 - 46487709
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||| |||||||| ||| ||||||||||||| |||| |||||||| |||||||||||||    
T  46487773 taattttaacctaatttttcccttcacacttttgcatttaatatttatctatagtaaaataaaat 46487709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 46488422 - 46488358
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||| |||||||||||| ||||||||||||| |||| |||||||| |||||||| ||||    
T  46488422 taattttaacctaattttttccttcacacttttgcatttaatatttatctatagtaaaattaaat 46488358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 8113520 - 8113461
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||||| |||||||||||||    
T  8113520 ttaacctaattttcccctccacacttttgcatttaatgtttatctatagtaaaataaaat 8113461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 11583333 - 11583386
Alignment:
Q  150 taattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||| | | ||||||||||||| |||||||||||||||||||||||||||    
T  11583333 taatttttccattcacacttttgcatttaatgtttatctaaagtaaaataaaat 11583386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 3753407 - 3753451
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||| |||||||||||||||||||||||||||||||||    
T  3753407 cctccatacttatgcatttaatgtttatttaaagtaaaataaaat 3753451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 8234930 - 8234974
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  8234930 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 8234974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 9764621 - 9764577
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  9764621 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 9764577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 11585902 - 11585946
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  11585902 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 11585946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 18684928 - 18684884
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  18684928 cctccacacttttgcatttaatgtttacttaaagtaaaataaaat 18684884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 39093830 - 39093786
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  39093830 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 39093786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 8526931 - 8526990
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||  |||||| ||||||||| ||||    
T  8526931 tatacttaacttaatctcttacttataaatgttaacctgtcttgctatacttaacctatt 8526990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 11586013 - 11586072
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttcc 325  Q
    ||||||||| |||||||||  |||||| ||||||||||||||| ||||||||| ||||||    
T  11586013 cttacttataaatgttaactcgtctcgttatacttaacctaattttaacctaatttttcc 11586072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 19361491 - 19361550
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||| | |||||| ||||||||| ||||    
T  19361491 tatacttaacttaatctcttacttataaatattaactcgtcttgctatacttaacctatt 19361550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 26101535 - 26101594
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||| | |||||| ||||||||| ||||    
T  26101535 tatacttaacttaatctcttacttataaatgttaactcgtcttgctatacttaacctatt 26101594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 29529616 - 29529675
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| ||||| |||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  29529616 tatacttaacttattctcttacttataaatgttaacccgtcttgctatacttaacctatt 29529675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 35856171 - 35856128
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  35856171 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 35856128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 4138033 - 4138095
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||||||| || ||| |||||||||||||| || ||||||    
T  4138033 ctaattttaacctaatttttccctccacactcttacatttaatgtttatctaaggtcaaataa 4138095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 40823932 - 40823978
Alignment:
Q  154 tttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||    
T  40823932 tttttcctccacacttttacatttaatgtttatctaaggtaaaataa 40823978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 48520286 - 48520348
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||| ||||||||| ||| |||| ||||||||| |||||||||    
T  48520286 ctaattttaacctaatttttcccttcacacttttacatttaatatttatctaaggtaaaataa 48520348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 8526835 - 8526872
Alignment:
Q  165 cacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  8526835 cacttttgcatttaatgtttatctaaagtaaaataaaa 8526872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 11582478 - 11582417
Alignment:
Q  143 tttaacttaattttttcctccacactttt-gcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||| |||||||||||  ||||||||| |||| ||||||||||| |||||||||||||||    
T  11582478 tttaacctaattttttcccacacactttttgcatttaatgtttatcaaaagtaaaataaaat 11582417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 11583349 - 11583386
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  11583349 acttttgcatttaatgtttatctaaagtaaaataaaat 11583386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 51657061 - 51657098
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  51657061 acttttgcatttaatgtttatctaaagtaaaataaaat 51657098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 55291165 - 55291202
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  55291165 acttttgcatttaatgtttatctaaagtaaaataaaat 55291202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 8113505 - 8113461
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| || |||||||||||||    
T  8113505 cctccacacttttgcatttaatgtttatctatagtaaaataaaat 8113461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 8526836 - 8526872
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||||||||||||||||||| |||||||||||||||    
T  8526836 acttttgcatttaatgtttatctaaagtaaaataaaa 8526872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 19362019 - 19362055
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||||||||||||||||||| |||||||||||||||    
T  19362019 acttttgcatttaatgtttatctaaagtaaaataaaa 19362055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 19368099 - 19368135
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||||||||||||||||||| |||||||||||||||    
T  19368099 acttttgcatttaatgtttatctaaagtaaaataaaa 19368135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 26101440 - 26101476
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||||||||||||||||||| |||||||||||||||    
T  26101440 acttttgcatttaatgtttatctaaagtaaaataaaa 26101476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 46487634 - 46487594
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  46487634 cttacttataaatgtaaacatgtctcgctatacttaaccta 46487594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 29529515 - 29529558
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||    
T  29529515 cctccacacttttgcatttaatgtttatctaaagtaaaagaaaa 29529558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 35856069 - 35856010
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| |||| || |||||| ||| ||||| ||||    
T  35856069 tatacttaacttaatctcttacttataaatgttaatccgtcttgctatatttaacttatt 35856010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 8113404 - 8113339
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| |||| || || ||| |||||||||||||||| ||||    
T  8113404 tatacttaacataatctcttacttataaatgttaatccgtc-tgctatacttaacatattatgttac 8113339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 8396030 - 8395988
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||    
T  8396030 tccacacttttgcatttaatgtttatctaaggtaaaataaaat 8395988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 11585854 - 11585896
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaacctaat 308  Q
    ||||||||| |||||||||  ||||||||||||||||||||||    
T  11585854 cttacttataaatgttaacccgtctcgctatacttaacctaat 11585896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 13495591 - 13495633
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaa 261  Q
    |||||| ||||||||||||||||||||| |||| |||||||||    
T  13495591 cctccacacttttgcatttaatgtttatctaaattaaaataaa 13495633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 51656836 - 51656878
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||| ||||||||||||||||||||| | ||||||||||||||    
T  51656836 tccacacttttgcatttaatgtttatctgaagtaaaataaaat 51656878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 8235045 - 8235090
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| ||||||||  |||||||||||||||||||||    
T  8235045 aatctcttacttataaatgttaatctgtctcgctatacttaaccta 8235090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 8526943 - 8526988
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| ||||||||| ||||| |||||||||||||||    
T  8526943 aatctcttacttataaatgttaacctgtcttgctatacttaaccta 8526988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 47757089 - 47757036
Alignment:
Q  25 atctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||||||||| ||| ||||||| |||||| ||||||||| |||||| ||||    
T  47757089 atctcttacttattaatgttaacccgtcttgctatacttaacctattatgttac 47757036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 5557630 - 5557674
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||| |||| ||||||||| ||||||||||||||||    
T  5557630 cctccacacttttccattcaatgtttatataaagtaaaataaaat 5557674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 10129775 - 10129692
Alignment:
Q  118 tccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaa 201  Q
    |||||||||| ||| |||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  10129775 tccgtctcgctatacttaatctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaa 10129692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 1513506 - 1513571
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1513506 ctaattttaacctaattttttcctccacacttttgcatttaatgtttatctaaagtaaaataaaat 1513571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 25882939 - 25882859
Alignment:
Q  123 ctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| ||| ||||| |||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  25882939 ctcgctatacttaacataattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 25882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 4290302 - 4290367
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  4290302 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 4290367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 18091347 - 18091412
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  18091347 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 18091412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 17837996 - 17837932
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  17837996 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 17837932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 6931427 - 6931362
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  6931427 ctaattttaacctaatttttccctccacgcttttgcatttaatgtttatctaaagtaaaataaaat 6931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 9543268 - 9543333
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  9543268 ctaattttaacctattttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 9543333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 19484929 - 19484993
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  19484929 ctaattttaacctaatttttccctccacacctttgcatttaatgtttatctaaagtaaaataaaa 19484993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 19487568 - 19487504
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  19487568 ctaattttaacctaatttttacctccacacttttgcatttaatgtttatctaaagtaaaagaaaa 19487504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 42781974 - 42781910
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  42781974 ctaattttaacctaatttttccccccacacttttgcatttaatgtttatctaaagtaaaataaaa 42781910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 28609228 - 28609165
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  28609228 taattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaaaaaaa 28609165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 328
Target Start/End: Complemental strand, 10129833 - 10129773
Alignment:
Q  267 ttacttatgaatgttaacatgtctcgctatacttaacctaatcttaacctaacttttcctcc 328  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  10129833 ttacttataaatgttaacatgtctcgctatacttaacctaattttaacctaa-ttttcctcc 10129773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 25236014 - 25236079
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| | ||||||| ||||||| |||||||||||||||||||||||||||    
T  25236014 ctaattttaacctaatttttccatccacacatttgcatataatgtttatctaaagtaaaataaaat 25236079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 10875154 - 10875214
Alignment:
Q  142 ttttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  10875154 ttttaacctaatttttccctccacacttttgcaattaatgtttatctaaagtaaaataaaa 10875214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 18091982 - 18092046
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| |||||||||||    
T  18091982 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtaaaataaaa 18092046  T

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Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 32676277 - 32676341
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||  ||||||||||| ||||||||||||||    
T  32676277 ctaattttaacctaatttttccctccacacttttgcaattaatgtttatcaaaagtaaaataaaa 32676341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 25883251 - 25883192
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||||||||||||| ||||||| |||||||||| ||||||||||||||||    
T  25883251 ttaacctaattttttcctccacacatttgcatttaatgtttatttaaagtaaaataaaat 25883192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 32676912 - 32676974
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||||||||||||||||  ||| |||||||||||||| |||||||||    
T  32676912 ctaattttaacctaattttttcctccacactttcacatttaatgtttatctaaggtaaaataa 32676974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 25236193 - 25236295
Alignment:
Q  89 tattatgttacgctactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatct 188  Q
    |||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||||            ||||| | |||||||||| ||||||||||||    
T  25236193 tattatgttacgttacttataaatgttaatccgtctcgctatacttaacctaattttc-----------tcctc-atacttttgcatttaatgtttatct 25236280  T
Q  189 aaagtaaaataaaat 203  Q
    |||||||||||||||    
T  25236281 aaagtaaaataaaat 25236295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 19485052 - 19485111
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  19485052 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 19485111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 19487445 - 19487386
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  19487445 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 19487386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 25883094 - 25883035
Alignment:
Q  144 ttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||| |||||||| ||||||||  ||||||| |||||||||||||||||||||||||||    
T  25883094 ttaacctaatttttccctccacatgtttgcatttaatgtttatctaaagtaaaataaaat 25883035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 42781851 - 42781792
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||| ||||    
T  42781851 tatacttaacttaatctcttacttataaatgttaacccgtcttgctatacttaacctatt 42781792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 9543901 - 9543963
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  9543901 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 9543963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 10048277 - 10048339
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  10048277 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 10048339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 25236481 - 25236547
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    ||||||| || ||||||||||||||||||| ||||||| |||||| ||||||||| |||||| ||||    
T  25236481 tatacttaacctaatctcttacttataaatgttaacccgtcttgctatacttaacctattatgttac 25236547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 25883407 - 25883349
Alignment:
Q  145 taacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||| |||||||| ||||||||||||||||| ||||||| |||||||||| ||||||||    
T  25883407 taacctaatttttccctccacacttttgcatttaatgttgatctaaagtagaataaaat 25883349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 28608610 - 28608548
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  28608610 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 28608548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 4290936 - 4290997
Alignment:
Q  139 taattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    |||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  4290936 taattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 4290997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 1513527 - 1513571
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  1513527 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 1513571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 4290323 - 4290367
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  4290323 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 4290367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 9543289 - 9543333
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  9543289 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 9543333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 18091368 - 18091412
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  18091368 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 18091412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 25882903 - 25882859
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  25882903 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 25882859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 25883236 - 25883192
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  25883236 cctccacacatttgcatttaatgtttatttaaagtaaaataaaat 25883192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 17837975 - 17837932
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  17837975 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 17837932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 10129734 - 10129692
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaa 261  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  10129734 cctccacacttttgcatttaatgtttatctaaagtaaaataaa 10129692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 25236381 - 25236423
Alignment:
Q  161 tccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  25236381 tccacacttttgtatttaatgtttatctaaagtaaaataaaat 25236423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 10875273 - 10875326
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaa 65  Q
    ||||||| |||||||||||||||||||||| ||||| | |||||| ||||||||    
T  10875273 tatacttaacttaatctcttacttataaatgttaactcgtcttgctatacttaa 10875326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 19487549 - 19487504
Alignment:
Q  217 tacctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||    
T  19487549 tacctccacacttttgcatttaatgtttatctaaagtaaaagaaaa 19487504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 25236258 - 25236295
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  25236258 acttttgcatttaatgtttatctaaagtaaaataaaat 25236295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 6931398 - 6931362
Alignment:
Q  227 cttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||||| ||||||||||||||||    
T  6931398 cttttgcatttaatgtttatctaaagtaaaataaaat 6931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 42781946 - 42781910
Alignment:
Q  226 acttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    ||||||||||||||||||||| |||||||||||||||    
T  42781946 acttttgcatttaatgtttatctaaagtaaaataaaa 42781910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 44240862 - 44240802
Alignment:
Q  143 tttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||| |||||||||| || | | ||||| || |||||||||||||||||||||||||||    
T  44240862 tttaacctaattttttcttctatatttttgtatttaatgtttatctaaagtaaaataaaat 44240802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 6931304 - 6931245
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||| ||| |||||| ||||||||| ||||    
T  6931304 tatacttaacataatctcttacttataaatgttaccccgtcttgctatacttaacctatt 6931245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 10875171 - 10875214
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||    
T  10875171 cctccacacttttgcaattaatgtttatctaaagtaaaataaaa 10875214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 18091470 - 18091529
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| ||||||  |||||| ||||||||| ||||    
T  18091470 tatacttaacctaatctcttacttataaatgttaacctgtcttgctatacttaacctatt 18091529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 19484950 - 19484993
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| || |||||||||||||||||| |||||||||||||||    
T  19484950 cctccacacctttgcatttaatgtttatctaaagtaaaataaaa 19484993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 28609208 - 28609165
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||    
T  28609208 cctccacacttttgcatttaatgtttatctaaagtaaaaaaaaa 28609165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 1514234 - 1514296
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| ||| ||||  | |||||||||| ||| |||||||||||||| |||||||||    
T  1514234 ctaattttaacctaaattttctcgccacacttttacatttaatgtttatctaaggtaaaataa 1514296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 25236381 - 25236423
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||    
T  25236381 tccacacttttgtatttaatgtttatctaaagtaaaataaaat 25236423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 25883069 - 25883035
Alignment:
Q  229 tttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||| ||||||||||||||||    
T  25883069 tttgcatttaatgtttatctaaagtaaaataaaat 25883035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 25883127 - 25883085
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaacctaat 308  Q
    ||||||||| |||||||||  ||||||||||||||||||||||    
T  25883127 cttacttataaatgttaacccgtctcgctatacttaacctaat 25883085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 9543394 - 9543451
Alignment:
Q  14 tactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  9543394 tacttaacctaatctcttacttataaatgttaatccgtcttgctatacttaacctatt 9543451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 18091482 - 18091527
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| ||||||||| ||||| |||||||||||||||    
T  18091482 aatctcttacttataaatgttaacctgtcttgctatacttaaccta 18091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 25236149 - 25236194
Alignment:
Q  261 aatcccttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    |||| ||||||||| ||||||||  |||||||||||||||||||||    
T  25236149 aatctcttacttataaatgttaatttgtctcgctatacttaaccta 25236194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 4290436 - 4290484
Alignment:
Q  23 taatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  4290436 taatctcttacttataaatgttaatccctcttgctatacttaacctatt 4290484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 25883393 - 25883349
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| |||||||||||||||||| || ||||||| ||||||||    
T  25883393 cctccacacttttgcatttaatgttgatctaaagtagaataaaat 25883349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 54; Significance: 6e-22; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 18034 - 18099
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  18034 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 18099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 18667 - 18729
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  18667 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 18729  T

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Target: scaffold0057; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 18055 - 18099
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  18055 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 18099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 18157 - 18216
Alignment:
Q  12 tatactttacttaatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||| || ||||||||||||||||||| |||| || |||||| ||||||||| ||||    
T  18157 tatacttaacctaatctcttacttataaatgttaatccctcttgctatacttaacctatt 18216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 9341 - 9405
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  9341 ctaattttaacctaatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaa 9405  T

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Target: scaffold0079; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 9981 - 10043
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||||| |||| ||| |||||||||||||| |||||||||    
T  9981 ctaattttaacctaatttttccctccacatttttccatttaatgtttatctaaggtaaaataa 10043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 9362 - 9405
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  9362 cctccacacttttgcatttaatgtttatctaaagtaaaataaaa 9405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 52; Significance: 9e-21; HSPs: 3)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 13897 - 13814
Alignment:
Q  120 cgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||||| | ||| |||||||||| ||||| |||| ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  13897 cgtctcactatacttaacctaatgttaacctaatattttcctccacacttttgcatttaatgtttatttaaagtaaaataaaat 13814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 13858 - 13814
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  13858 cctccacacttttgcatttaatgtttatttaaagtaaaataaaat 13814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 14078 - 13982
Alignment:
Q  107 ataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |  |||| | ||| ||||| |||||||||  |||||||| | |||||||||||  || ||||||||||||||||||||| |||||    
T  14078 ataaatgttaacctatctcactatatttaacttaattttaatctaatttttccttccacacttttctatttaatgtttatctaaagtaaaacaaaat 13982  T

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Target: scaffold0009 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 232606 - 232542
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  232606 ctaattttaacctaatttttccctccacacatttgcatttaatgtttatctaaagtaaaataaaa 232542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 231973 - 231911
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||| | |||||| ||| |||||||||||||| |||||||||    
T  231973 ctaattttaacctaatttttacctcaaaacttttacatttaatgtttatctaaggtaaaataa 231911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 232585 - 232542
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| || |||||||||||||||||| |||||||||||||||    
T  232585 cctccacacatttgcatttaatgtttatctaaagtaaaataaaa 232542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 47; Significance: 9e-18; HSPs: 6)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 3421 - 3359
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    |||||||||||  ||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  3421 ctaattttaacccaattttttcctccacacttttacatttaatgtttatctaaagtaaaataa 3359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 4043 - 3973
Alignment:
Q  138 ctaattttaacttaattttttcctccacactttt-----gcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| |||||||||||||     |||| |||||||||||||||||||||||||||    
T  4043 ctaattttaacctaatttttccctccacacttttaatttgcatttaatgtttatctaaagtaaaataaaat 3973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 11783 - 11713
Alignment:
Q  138 ctaattttaacttaattttttcctccacactttt-----gcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||| |||||||| |||||||||||||     |||| |||||||||||||||||||||||||||    
T  11783 ctaattttaacctaatttttccctccacacttttaatttgcatttaatgtttatctaaagtaaaataaaat 11713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 4007 - 3973
Alignment:
Q  229 tttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||| ||||||||||||||||    
T  4007 tttgcatttaatgtttatctaaagtaaaataaaat 3973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 11747 - 11713
Alignment:
Q  229 tttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||||||||||||||| ||||||||||||||||    
T  11747 tttgcatttaatgtttatctaaagtaaaataaaat 11713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 3400 - 3359
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataa 260  Q
    |||||| |||||| |||||||||||||| |||||||||||||    
T  3400 cctccacacttttacatttaatgtttatctaaagtaaaataa 3359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 998 - 933
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    ||||||||||  | |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  998 ctaattttaaactgatttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 977 - 933
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  977 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 865 - 817
Alignment:
Q  23 taatctcttacttataaatcttaacccatcttgcaatacttaacatatt 71  Q
    ||||||||||||||||||| ||||||| |||| | ||||||||| ||||    
T  865 taatctcttacttataaatgttaacccgtcttactatacttaacctatt 817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 3598 - 3647
Alignment:
Q  154 tttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaat 203  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  3598 ttttccctccacacttttgcatttaatgtttatctaaagtaaaataaaat 3647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 3603 - 3647
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaat 263  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  3603 cctccacacttttgcatttaatgtttatctaaagtaaaataaaat 3647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 4215 - 4267
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaa 190  Q
    ||||||||||| |||||||| ||||||||||||| ||| ||||||||||||||    
T  4215 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaa 4267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 10664 - 10716
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaa 190  Q
    |||||||||||  ||||||| ||||||||||||| ||| ||||||||||||||    
T  10664 ctaattttaaccaaatttttccctccacacttttacatttaatgtttatctaa 10716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 8809 - 8861
Alignment:
Q  150 taattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  8809 taatttttccctccacacctttgcatttaatgtttatctaaagtaaaataaaa 8861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 8818 - 8861
Alignment:
Q  219 cctccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||||| || |||||||||||||||||| |||||||||||||||    
T  8818 cctccacacctttgcatttaatgtttatctaaagtaaaataaaa 8861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 10518 - 10454
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataaaa 202  Q
    ||||||||||| |||||||| | |||| ||||||| || ||||||||||||||||||||||||||    
T  10518 ctaattttaacctaatttttccatccatacttttgtatttaatgtttatctaaagtaaaataaaa 10454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 9885 - 9823
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| |||||||||||||| |||||||||    
T  9885 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaaggtaaaataa 9823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 10495 - 10454
Alignment:
Q  221 tccaaacttttgcatttaatgtttatttaaagtaaaataaaa 262  Q
    |||| ||||||| ||||||||||||| |||||||||||||||    
T  10495 tccatacttttgtatttaatgtttatctaaagtaaaataaaa 10454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 10387 - 10343
Alignment:
Q  20 acttaatctcttacttataaatcttaacccatcttgcaatactta 64  Q
    ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  10387 acttaatctcttatttataaatgttaacccgtcttgctatactta 10343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 2427 - 2337
Alignment:
Q  102 tactcataaatgttaatccgtctcgcaatagttaacctaattttaacttaattttttcctcca-cacttttgcatctaatgtttatctaaa 191  Q
    |||| ||||||||||| || ||||||| || | |||||||||||||| |||||||| |||||| ||||||| ||| | |||||||||||||    
T  2427 tacttataaatgttaacccatctcgcactactaaacctaattttaacctaatttttccctccaccactttttcatttgatgtttatctaaa 2337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 54968 - 54906
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||| || ||||||    
T  54968 ctaattttaacctaatttttccctccacacttttacatttaatgtttatctaaggtcaaataa 54906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 13733 - 13671
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcatctaatgtttatctaaagtaaaataa 200  Q
    ||||||||||| |||||||| |||||| |||||| ||| ||||||||||||||  ||||||||    
T  13733 ctaattttaacctaatttttccctccagacttttacatttaatgtttatctaagctaaaataa 13671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 27303 - 27340
Alignment:
Q  138 ctaattttaacttaattttttcctccacacttttgcat 175  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  27303 ctaattttaacctaatttttccctccacacttttgcat 27340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 1 - 53
Alignment:
Q  26 tctcttacttataaatcttaacccatcttgcaatacttaacatattattttac 78  Q
    |||||||||||||||| ||||||| ||| || ||||||||| |||||| ||||    
T  1 tctcttacttataaatgttaacccgtctcgctatacttaacctattatgttac 53  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 4 - 44
Alignment:
Q  266 cttacttatgaatgttaacatgtctcgctatacttaaccta 306  Q
    ||||||||| |||||||||  ||||||||||||||||||||    
T  4 cttacttataaatgttaacccgtctcgctatacttaaccta 44  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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