View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3892_low_8 (Length: 592)

Name: NF3892_low_8
Description: NF3892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3892_low_8
NF3892_low_8
[»] chr2 (48 HSPs)
chr2 (16-473)||(38444144-38444600)
chr2 (470-588)||(25627166-25627284)
chr2 (468-588)||(7601197-7601317)
chr2 (470-588)||(41575705-41575823)
chr2 (472-588)||(18504615-18504732)
chr2 (488-588)||(44022411-44022511)
chr2 (469-588)||(37317019-37317138)
chr2 (466-588)||(6729901-6730023)
chr2 (470-588)||(15177512-15177630)
chr2 (470-588)||(20682785-20682903)
chr2 (486-588)||(26436505-26436607)
chr2 (468-588)||(41319724-41319844)
chr2 (468-588)||(43328602-43328721)
chr2 (469-588)||(5096391-5096510)
chr2 (469-588)||(41436975-41437094)
chr2 (470-588)||(10333380-10333498)
chr2 (476-565)||(2831874-2831963)
chr2 (468-588)||(8373577-8373697)
chr2 (468-588)||(16646389-16646509)
chr2 (472-588)||(22718347-22718463)
chr2 (470-586)||(40471881-40471997)
chr2 (469-588)||(1748973-1749092)
chr2 (469-588)||(31603218-31603336)
chr2 (497-588)||(45036506-45036597)
chr2 (470-588)||(11277677-11277795)
chr2 (470-588)||(16125885-16126002)
chr2 (470-588)||(16127583-16127700)
chr2 (470-588)||(16333623-16333740)
chr2 (470-588)||(42754157-42754275)
chr2 (527-588)||(38963938-38963999)
chr2 (520-592)||(4137548-4137620)
chr2 (524-584)||(11383901-11383961)
chr2 (520-588)||(12209132-12209200)
chr2 (527-588)||(37987795-37987856)
chr2 (520-592)||(45001736-45001808)
chr2 (528-592)||(8924599-8924663)
chr2 (470-588)||(7724412-7724531)
chr2 (497-592)||(33046064-33046159)
chr2 (520-584)||(6075272-6075336)
chr2 (520-592)||(41465217-41465289)
chr2 (521-587)||(19637897-19637963)
chr2 (521-587)||(19836490-19836556)
chr2 (530-592)||(38934893-38934954)
chr2 (497-588)||(8896414-8896505)
chr2 (497-592)||(25762333-25762428)
chr2 (515-588)||(24853392-24853463)
chr2 (528-592)||(5861425-5861489)
chr2 (520-592)||(15770934-15771006)
[»] chr7 (45 HSPs)
chr7 (470-592)||(9136465-9136587)
chr7 (469-588)||(38441956-38442075)
chr7 (475-588)||(41007765-41007878)
chr7 (468-588)||(47713233-47713353)
chr7 (470-588)||(48448661-48448779)
chr7 (470-588)||(29247770-29247888)
chr7 (468-592)||(35693631-35693755)
chr7 (470-588)||(32972138-32972256)
chr7 (497-588)||(40818525-40818618)
chr7 (471-588)||(18756732-18756848)
chr7 (487-588)||(31496467-31496566)
chr7 (475-588)||(33376918-33377030)
chr7 (468-588)||(36820019-36820139)
chr7 (492-588)||(46242303-46242399)
chr7 (497-588)||(9173166-9173257)
chr7 (469-588)||(16806948-16807067)
chr7 (470-592)||(19327454-19327576)
chr7 (486-588)||(19817478-19817580)
chr7 (470-588)||(32345586-32345704)
chr7 (486-588)||(36404745-36404847)
chr7 (470-592)||(38069190-38069312)
chr7 (526-588)||(38850845-38850907)
chr7 (469-588)||(5842260-5842380)
chr7 (520-592)||(25273870-25273942)
chr7 (481-574)||(3123960-3124053)
chr7 (469-588)||(41844912-41845032)
chr7 (521-588)||(4620208-4620274)
chr7 (470-588)||(38259623-38259741)
chr7 (520-592)||(47080756-47080828)
chr7 (521-588)||(27621149-27621216)
chr7 (472-592)||(32222689-32222811)
chr7 (469-562)||(25571494-25571587)
chr7 (520-588)||(30462074-30462142)
chr7 (470-545)||(37099679-37099754)
chr7 (470-592)||(38353401-38353523)
chr7 (470-555)||(26651051-26651136)
chr7 (547-592)||(48796309-48796354)
chr7 (528-592)||(14543645-14543708)
chr7 (520-592)||(38198531-38198603)
chr7 (521-588)||(27248699-27248766)
chr7 (547-588)||(40232071-40232112)
chr7 (520-588)||(7312951-7313019)
chr7 (560-592)||(28016254-28016286)
chr7 (469-561)||(28016581-28016672)
chr7 (480-540)||(39174005-39174065)
[»] chr1 (56 HSPs)
chr1 (468-588)||(5117239-5117359)
chr1 (470-592)||(47912420-47912542)
chr1 (468-588)||(8250648-8250768)
chr1 (469-588)||(44963478-44963597)
chr1 (470-588)||(23393375-23393493)
chr1 (468-588)||(26476814-26476934)
chr1 (477-592)||(25815667-25815782)
chr1 (470-588)||(40058774-40058892)
chr1 (470-592)||(48312167-48312289)
chr1 (486-588)||(52688674-52688776)
chr1 (468-588)||(41414346-41414466)
chr1 (481-588)||(43452983-43453090)
chr1 (470-588)||(10100320-10100438)
chr1 (470-588)||(31651708-31651826)
chr1 (468-588)||(10124252-10124372)
chr1 (468-588)||(50014366-50014486)
chr1 (470-588)||(5606198-5606316)
chr1 (470-588)||(8048555-8048673)
chr1 (470-588)||(44240662-44240780)
chr1 (470-555)||(12685736-12685821)
chr1 (520-588)||(4489204-4489272)
chr1 (477-588)||(1821443-1821553)
chr1 (469-588)||(31931985-31932103)
chr1 (473-588)||(49903496-49903610)
chr1 (470-588)||(28490303-28490421)
chr1 (470-592)||(38786753-38786875)
chr1 (470-588)||(41855529-41855646)
chr1 (470-588)||(44741486-44741604)
chr1 (475-588)||(7075142-7075255)
chr1 (469-588)||(5945908-5946027)
chr1 (481-592)||(10648017-10648127)
chr1 (497-588)||(33525997-33526087)
chr1 (470-588)||(9334524-9334642)
chr1 (470-588)||(9358297-9358415)
chr1 (468-592)||(23337946-23338069)
chr1 (520-588)||(52749424-52749492)
chr1 (501-588)||(31745884-31745971)
chr1 (521-588)||(40883554-40883620)
chr1 (470-588)||(3138735-3138853)
chr1 (468-588)||(48389209-48389330)
chr1 (479-592)||(48613897-48614012)
chr1 (468-588)||(2138834-2138954)
chr1 (520-588)||(6017306-6017374)
chr1 (469-581)||(26544018-26544130)
chr1 (469-588)||(45299461-45299581)
chr1 (481-585)||(52141871-52141975)
chr1 (521-592)||(2126794-2126865)
chr1 (515-592)||(8980813-8980890)
chr1 (520-592)||(33730054-33730124)
chr1 (527-588)||(36035829-36035890)
chr1 (521-588)||(44452338-44452406)
chr1 (538-588)||(26345279-26345329)
chr1 (469-557)||(29253611-29253700)
chr1 (516-592)||(42728770-42728844)
chr1 (538-592)||(13971631-13971687)
chr1 (520-592)||(36203720-36203791)
[»] chr5 (58 HSPs)
chr5 (469-588)||(26801903-26802022)
chr5 (469-588)||(26809453-26809572)
chr5 (470-592)||(41410749-41410871)
chr5 (469-588)||(26824480-26824599)
chr5 (469-588)||(27674360-27674479)
chr5 (470-588)||(1831207-1831325)
chr5 (470-588)||(40316674-40316792)
chr5 (486-585)||(39104098-39104197)
chr5 (468-588)||(1918631-1918751)
chr5 (486-588)||(30788348-30788450)
chr5 (468-588)||(41042638-41042758)
chr5 (473-588)||(4152116-4152231)
chr5 (497-588)||(14639545-14639636)
chr5 (470-588)||(31190980-31191098)
chr5 (470-588)||(40796875-40796993)
chr5 (468-588)||(27675683-27675803)
chr5 (477-588)||(32110452-32110563)
chr5 (470-592)||(1780948-1781070)
chr5 (470-588)||(2805941-2806059)
chr5 (470-588)||(9936691-9936809)
chr5 (486-588)||(39035703-39035805)
chr5 (468-588)||(14633150-14633270)
chr5 (476-588)||(40080124-40080236)
chr5 (469-588)||(30721487-30721606)
chr5 (470-588)||(2799775-2799893)
chr5 (470-592)||(14607361-14607482)
chr5 (498-588)||(40365719-40365809)
chr5 (468-588)||(10465096-10465216)
chr5 (520-588)||(34347614-34347682)
chr5 (508-592)||(39925343-39925427)
chr5 (469-588)||(19344501-19344620)
chr5 (469-588)||(20040217-20040336)
chr5 (470-588)||(14057851-14057969)
chr5 (470-588)||(14355642-14355760)
chr5 (470-588)||(20023003-20023121)
chr5 (520-588)||(2551480-2551548)
chr5 (520-588)||(14140061-14140129)
chr5 (476-588)||(32473832-32473943)
chr5 (520-588)||(36578729-36578797)
chr5 (497-588)||(967337-967428)
chr5 (473-588)||(34169972-34170087)
chr5 (470-588)||(30351874-30351992)
chr5 (470-588)||(41262932-41263050)
chr5 (470-588)||(41410463-41410580)
chr5 (475-588)||(20502856-20502969)
chr5 (520-588)||(1098318-1098386)
chr5 (520-588)||(30211594-30211662)
chr5 (470-588)||(1831494-1831611)
chr5 (470-587)||(6734925-6735043)
chr5 (507-588)||(8627278-8627360)
chr5 (470-588)||(40316961-40317078)
chr5 (527-588)||(13548356-13548417)
chr5 (528-592)||(39482783-39482847)
chr5 (526-592)||(3050839-3050905)
chr5 (515-592)||(41625186-41625263)
chr5 (521-592)||(6500271-6500341)
chr5 (528-586)||(21031779-21031837)
chr5 (515-588)||(34278614-34278687)
[»] chr3 (72 HSPs)
chr3 (469-588)||(10228526-10228645)
chr3 (470-588)||(44821332-44821450)
chr3 (469-588)||(9997677-9997796)
chr3 (469-588)||(10106181-10106300)
chr3 (469-588)||(10232282-10232401)
chr3 (486-588)||(1334112-1334214)
chr3 (483-588)||(36594229-36594335)
chr3 (469-592)||(49818896-49819019)
chr3 (470-592)||(4465020-4465142)
chr3 (470-592)||(32961385-32961507)
chr3 (468-588)||(53055423-53055541)
chr3 (468-588)||(16434653-16434773)
chr3 (468-588)||(43394355-43394475)
chr3 (470-588)||(2643068-2643185)
chr3 (470-588)||(33462848-33462966)
chr3 (470-588)||(42098425-42098543)
chr3 (468-588)||(12948183-12948303)
chr3 (469-588)||(34680324-34680444)
chr3 (521-588)||(18013319-18013386)
chr3 (469-588)||(47070165-47070284)
chr3 (470-588)||(900886-901004)
chr3 (470-588)||(1778504-1778621)
chr3 (470-588)||(4945649-4945767)
chr3 (470-588)||(29444851-29444969)
chr3 (470-588)||(29588518-29588636)
chr3 (470-588)||(29720538-29720656)
chr3 (470-588)||(34263502-34263620)
chr3 (515-588)||(9281306-9281379)
chr3 (468-588)||(29455504-29455624)
chr3 (516-588)||(47339928-47340000)
chr3 (469-588)||(4228985-4229104)
chr3 (469-592)||(26759617-26759740)
chr3 (521-588)||(36178985-36179052)
chr3 (469-588)||(46866486-46866605)
chr3 (470-588)||(29793176-29793294)
chr3 (470-588)||(29809487-29809605)
chr3 (470-588)||(34555294-34555412)
chr3 (470-592)||(34669747-34669869)
chr3 (516-588)||(3817866-3817938)
chr3 (520-588)||(9484739-9484807)
chr3 (520-588)||(36364611-36364679)
chr3 (520-588)||(38878326-38878394)
chr3 (508-588)||(44774262-44774342)
chr3 (520-588)||(48927650-48927718)
chr3 (520-588)||(49076274-49076342)
chr3 (520-592)||(50673816-50673888)
chr3 (520-588)||(53274843-53274911)
chr3 (470-588)||(14750858-14750976)
chr3 (512-586)||(22755831-22755905)
chr3 (470-588)||(28958797-28958915)
chr3 (515-592)||(4016604-4016681)
chr3 (523-592)||(23591203-23591271)
chr3 (475-588)||(52093897-52094010)
chr3 (520-588)||(12250446-12250514)
chr3 (520-592)||(43170113-43170185)
chr3 (520-592)||(43398965-43399037)
chr3 (492-588)||(53019971-53020067)
chr3 (501-592)||(5852488-5852579)
chr3 (521-592)||(23591469-23591539)
chr3 (520-592)||(40415061-40415135)
chr3 (520-588)||(20144770-20144838)
chr3 (521-588)||(38833562-38833629)
chr3 (537-588)||(43370434-43370485)
chr3 (467-572)||(28389067-28389172)
chr3 (520-564)||(31440480-31440524)
chr3 (520-592)||(37166618-37166690)
chr3 (521-588)||(45516895-45516962)
chr3 (157-210)||(10877142-10877195)
chr3 (531-588)||(40732688-40732745)
chr3 (499-592)||(49220611-49220704)
chr3 (520-592)||(9794314-9794386)
chr3 (521-588)||(39557434-39557499)
[»] chr8 (55 HSPs)
chr8 (470-588)||(38036658-38036776)
chr8 (470-588)||(8496686-8496804)
chr8 (469-588)||(20671399-20671518)
chr8 (468-588)||(29917726-29917846)
chr8 (469-592)||(32909194-32909317)
chr8 (469-588)||(43049068-43049187)
chr8 (470-588)||(21132728-21132846)
chr8 (471-588)||(37094275-37094392)
chr8 (468-588)||(44887513-44887633)
chr8 (469-588)||(14378486-14378605)
chr8 (469-588)||(27302005-27302124)
chr8 (469-584)||(29616125-29616240)
chr8 (470-588)||(761693-761811)
chr8 (470-588)||(11756921-11757039)
chr8 (470-588)||(44362064-44362182)
chr8 (476-588)||(1645212-1645324)
chr8 (477-588)||(14511983-14512094)
chr8 (473-588)||(23547211-23547326)
chr8 (470-588)||(38842306-38842424)
chr8 (468-585)||(67241-67358)
chr8 (515-592)||(23849754-23849831)
chr8 (475-592)||(44039964-44040081)
chr8 (469-588)||(4960294-4960413)
chr8 (470-588)||(14583721-14583840)
chr8 (469-576)||(40645837-40645944)
chr8 (497-588)||(44717438-44717529)
chr8 (470-588)||(11538833-11538950)
chr8 (470-588)||(23437613-23437731)
chr8 (470-588)||(29708704-29708822)
chr8 (470-588)||(30464575-30464693)
chr8 (498-588)||(44871474-44871564)
chr8 (527-588)||(5777411-5777472)
chr8 (475-588)||(25866212-25866325)
chr8 (520-588)||(15870318-15870386)
chr8 (470-585)||(28583102-28583217)
chr8 (521-588)||(42150001-42150068)
chr8 (470-564)||(3466453-3466547)
chr8 (527-588)||(25009287-25009348)
chr8 (520-588)||(18419141-18419209)
chr8 (469-588)||(30653503-30653623)
chr8 (521-588)||(44020900-44020966)
chr8 (469-548)||(44947188-44947267)
chr8 (486-588)||(8123781-8123883)
chr8 (474-576)||(17523958-17524060)
chr8 (470-588)||(36631994-36632111)
chr8 (527-584)||(4326976-4327033)
chr8 (527-588)||(25691454-25691515)
chr8 (520-592)||(40035426-40035498)
chr8 (526-592)||(32061157-32061223)
chr8 (516-592)||(14400906-14400983)
chr8 (528-592)||(1226643-1226706)
chr8 (469-551)||(8058404-8058486)
chr8 (144-210)||(34195123-34195189)
chr8 (520-588)||(13888480-13888548)
chr8 (520-588)||(16345320-16345388)
[»] chr4 (52 HSPs)
chr4 (468-588)||(1615682-1615802)
chr4 (468-587)||(2805971-2806090)
chr4 (470-588)||(17492810-17492928)
chr4 (468-588)||(24505654-24505774)
chr4 (473-592)||(11260841-11260960)
chr4 (469-588)||(47833945-47834064)
chr4 (470-585)||(51716677-51716792)
chr4 (468-588)||(4271814-4271934)
chr4 (469-592)||(28988195-28988318)
chr4 (470-588)||(29821193-29821311)
chr4 (470-588)||(6520578-6520696)
chr4 (470-588)||(28898873-28898991)
chr4 (467-588)||(48079847-48079968)
chr4 (476-588)||(39260495-39260607)
chr4 (468-588)||(48380899-48381019)
chr4 (468-588)||(55631675-55631795)
chr4 (469-588)||(39171101-39171220)
chr4 (469-588)||(39376669-39376788)
chr4 (470-592)||(1377947-1378069)
chr4 (470-588)||(44210292-44210410)
chr4 (469-588)||(37164159-37164279)
chr4 (469-588)||(8525217-8525336)
chr4 (469-588)||(28914511-28914630)
chr4 (469-588)||(31152804-31152923)
chr4 (470-592)||(37588332-37588455)
chr4 (469-588)||(40411409-40411528)
chr4 (469-588)||(50685063-50685182)
chr4 (470-588)||(3708396-3708514)
chr4 (486-592)||(29424785-29424891)
chr4 (470-588)||(43447308-43447426)
chr4 (470-588)||(51306036-51306154)
chr4 (522-588)||(52818544-52818610)
chr4 (468-588)||(10384991-10385111)
chr4 (468-588)||(48652615-48652735)
chr4 (470-588)||(46608356-46608475)
chr4 (473-587)||(1981186-1981300)
chr4 (470-588)||(23605704-23605822)
chr4 (470-588)||(39332632-39332750)
chr4 (520-588)||(24334230-24334298)
chr4 (508-588)||(28909680-28909760)
chr4 (468-588)||(37667574-37667694)
chr4 (472-580)||(42185425-42185533)
chr4 (520-588)||(1613070-1613138)
chr4 (520-588)||(31657209-31657276)
chr4 (498-588)||(30386974-30387064)
chr4 (522-588)||(43047530-43047596)
chr4 (515-592)||(20651549-20651626)
chr4 (520-592)||(45064406-45064478)
chr4 (480-588)||(54802870-54802978)
chr4 (468-587)||(30733734-30733854)
chr4 (521-588)||(42862146-42862213)
chr4 (528-592)||(27982687-27982751)
[»] scaffold0195 (1 HSPs)
scaffold0195 (468-588)||(46-166)
[»] scaffold0172 (1 HSPs)
scaffold0172 (476-588)||(19544-19656)
[»] chr6 (29 HSPs)
chr6 (463-592)||(6142307-6142436)
chr6 (480-588)||(31948460-31948567)
chr6 (469-588)||(35117419-35117538)
chr6 (470-592)||(995702-995824)
chr6 (470-588)||(2141711-2141829)
chr6 (470-588)||(2667132-2667250)
chr6 (480-588)||(4889943-4890051)
chr6 (477-588)||(10105954-10106065)
chr6 (521-588)||(10109269-10109336)
chr6 (470-592)||(16661408-16661531)
chr6 (469-588)||(17496134-17496253)
chr6 (469-588)||(31709036-31709154)
chr6 (470-588)||(2397913-2398031)
chr6 (470-588)||(32673891-32674009)
chr6 (468-588)||(12677122-12677243)
chr6 (512-588)||(26210890-26210966)
chr6 (469-588)||(29514833-29514951)
chr6 (521-592)||(32541335-32541406)
chr6 (470-588)||(2913040-2913158)
chr6 (470-588)||(24825308-24825426)
chr6 (520-588)||(30699404-30699472)
chr6 (473-588)||(6188466-6188581)
chr6 (470-577)||(16969533-16969640)
chr6 (470-588)||(24798353-24798471)
chr6 (520-588)||(2656527-2656595)
chr6 (520-588)||(9022983-9023051)
chr6 (480-569)||(24949834-24949923)
chr6 (528-592)||(16120739-16120803)
chr6 (525-586)||(26389212-26389273)
[»] scaffold0221 (1 HSPs)
scaffold0221 (468-588)||(5519-5639)
[»] scaffold0500 (1 HSPs)
scaffold0500 (470-588)||(480-596)
[»] scaffold0385 (1 HSPs)
scaffold0385 (473-592)||(2026-2145)
[»] scaffold0001 (1 HSPs)
scaffold0001 (470-592)||(184105-184227)
[»] scaffold0281 (1 HSPs)
scaffold0281 (470-588)||(13247-13366)
[»] scaffold1248 (1 HSPs)
scaffold1248 (520-586)||(1309-1375)
[»] scaffold0952 (1 HSPs)
scaffold0952 (520-586)||(938-1004)
[»] scaffold0289 (1 HSPs)
scaffold0289 (470-588)||(9267-9384)
[»] scaffold0283 (1 HSPs)
scaffold0283 (469-548)||(3166-3245)


Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 16 - 473
Target Start/End: Original strand, 38444144 - 38444600
Alignment:
Q  16 taaataacacaacaagcctcatcacacttgtcgtatcaaaatggatagttgagaaaagnnnnnnnnnnnnnngttaaccctctagtttccaagggaaatc 115  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||              ||||||||||||||||| |||| |||||    
T  38444144 taaataacacaacgagcctcaccacacttgtcgtatcaaaatggatagttgagaaaaggtttttttttat--gttaaccctctagtttctaaggaaaatc 38444241  T
Q  116 ggctttagtaatttggggttcggtcagaaggtaaataaatcctggtcaagaattcttccatttaggaattgaactcaggttctcccaaacgattcaccca 215  Q
    |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||| ||  ||||||||||||| | |||||| ||||| |||||||||    
T  38444242 ggctttagtaatttggggttcgatcagaaggtaaataaatcctaatcaagaattctttcacctaggaattgaactaacgttctctcaaacaattcaccca 38444341  T
Q  216 ttataaagttcatcaatcacttgagtctaatattgaaaaatctaattttaaagcacatgttacaacaatatttcaactagatgaataatcagttgaagaa 315  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||    
T  38444342 ttataaagttcatcaatcacttgagtctaatcttgagaaatctaattttaaagcacatgttataacaatacttcaactcgatgaaaaatcagttgaagaa 38444441  T
Q  316 gaacaaattttgggcatgtgtcggtcctcaacacacgataggccgggaatatttcaataaaatgttggttacaatcatgaaatgtaactaaagggaaact 415  Q
    |||||||||| |||||||||||  |||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||    
T  38444442 gaacaaatttagggcatgtgtccatcctcaacacaccataggctgggaatatttcaataaaatgatggttacgatcatgaaatgtaactaaaggg-aact 38444540  T
Q  416 tagttgtcttttccaatttccaataaataacag--ctcaaagaataagtagttgaatact 473  Q
    ||||||| |||| |||||||||||||||| |||  |||||||||||||||||||||||||    
T  38444541 tagttgtgttttacaatttccaataaatagcagctctcaaagaataagtagttgaatact 38444600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 25627284 - 25627166
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||||||||| |||| | ||||||| ||||||   |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |    
T  25627284 tactccctccgtcccttaatacttgacatagttgaccttattatgcatgacaatgcataattttgagcttaaatatattgaataatatattataaaaaat 25627185  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  25627184 tatgaaaatttgatatttt 25627166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 7601197 - 7601317
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||| |||||||||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||||||||||||| ||||||||| |||||| ||||    
T  7601197 aatattccctccgtcccttaatacttgacacagttgactttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattaggaaaa 7601296  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  7601297 attatgaaaatttgatatttt 7601317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 41575823 - 41575705
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||| ||| |||||||||   |||||  ||  |||||||||||||||||||||||||| ||||||||| | ||||||||| |    
T  41575823 tactccctccgtcccttaatatatgatacagttgactgcattacgcatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaat 41575724  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  41575723 catgaaaatttgatatttt 41575705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 472 - 588
Target Start/End: Complemental strand, 18504732 - 18504615
Alignment:
Q  472 ctccctccgtccctt-aatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaattt 570  Q
    |||||||||||| || |||| |||| | ||||||| ||||||| |||| ||||||||||||| |||||||||||| ||||||||| ||| ||||||| ||    
T  18504732 ctccctccgtccatttaatacttgatatagttgaccttattacgtatgtcaatgcataatttcgagcttaaatatcttgaataatatatgagaaaaaatt 18504633  T
Q  571 atgaaaatttgatatttt 588  Q
    ||||||||||||||||||    
T  18504632 atgaaaatttgatatttt 18504615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 588
Target Start/End: Complemental strand, 44022511 - 44022411
Alignment:
Q  488 atatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattt 587  Q
    |||| ||| ||||||||| |||||||  ||| |||||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  44022511 atatatgacacagttgaccttattacgcatgtcaatgcataattttgaacttaaatatattgaataatatattagaaaaaattataaaaatttgatattt 44022412  T
Q  588 t 588  Q
    |    
T  44022411 t 44022411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 37317138 - 37317019
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||||||||||||||||||||||| ||||||||| | |||||||||     
T  37317138 atactccctccgtcccttaatacatgacacagttgactccattacgcattccaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaa 37317039  T
Q  569 ttatgaaaatttgatatttt 588  Q
    | ||||||||||||||||||    
T  37317038 tcatgaaaatttgatatttt 37317019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 466 - 588
Target Start/End: Original strand, 6729901 - 6730023
Alignment:
Q  466 tgaatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaa 565  Q
    |||||||||||||||||||||||||  ||| ||| |||||   |||||  ||  |||||||||||||||||||||||||| ||||||||| | |||||||    
T  6729901 tgaatactccctccgtcccttaatacatgacacacttgactccattacgcattccaatgcataattttgagcttaaatatcttgaataatatgttagaaa 6730000  T
Q  566 aatttatgaaaatttgatatttt 588  Q
    || | ||||||||||||||||||    
T  6730001 aaatcatgaaaatttgatatttt 6730023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 15177630 - 15177512
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||| |||||  ||| |||| ||||  ||||||| |||| |||||||||||||||| |||||||| |||| |||| ||||| ||||| |    
T  15177630 tactccctccgtcccataatacatgacacagatgaccatattacacatgaaaatgcataattttgagtttaaatatcttgagtaatatattataaaaaat 15177531  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  15177530 tatgaaaatttgatatttt 15177512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 20682903 - 20682785
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  ||||||||||||||||| |||||||| ||||||||| | ||||||||| |    
T  20682903 tactccctccgtcccttaataaatgacacagttgactccattacgcatttcaatgcataattttgagtttaaatatcttgaataatatgttagaaaaaat 20682804  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  20682803 catgaaaatttgatatttt 20682785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 486 - 588
Target Start/End: Original strand, 26436505 - 26436607
Alignment:
Q  486 taatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatat 585  Q
    |||||||| | | ||||||| |||||||  ||| |||||||||| |||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  26436505 taatatttaacatagttgaccttattacgcatgtcaatgcataactttgagtttaaatatcttgaataatatattagaaaaaattatgaaaatttgatat 26436604  T
Q  586 ttt 588  Q
    |||    
T  26436605 ttt 26436607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 41319724 - 41319844
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||  |||||    
T  41319724 aatactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattgaaaaaa 41319823  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  41319824 attatgaaaatttgatatttt 41319844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 43328602 - 43328721
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||| | ||| |||||||||| |||| ||| ||||| |||||||  ||  |||||||||||||| ||||||||||| ||||||||| ||||| |||||    
T  43328602 aatacttcatccatcccttaatacttgacacaattgaccttattacgcatc-caatgcataatttttagcttaaatattttgaataatatattataaaaa 43328700  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  43328701 attatgaaaatttgatatttt 43328721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 5096510 - 5096391
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| ||||||||    |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||     
T  5096510 atactccctccgtcccttaataagtgacacagttgattcaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaa 5096411  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  5096410 ttatgaaaatttgatatttt 5096391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 41437094 - 41436975
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||    ||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||     
T  41437094 atactccctccgtcccttaataagtgacacagttgacccatttacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaa 41436995  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  41436994 ttatgaaaatttgatatttt 41436975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 10333380 - 10333498
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  10333380 tactccctccgtcccttaataagtgacacagttgacccgattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 10333479  T
Q  570 tatgaaaatttgatatttt 588  Q
    ||||| |||||||||||||    
T  10333480 tatgacaatttgatatttt 10333498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 476 - 565
Target Start/End: Complemental strand, 2831963 - 2831874
Alignment:
Q  476 ctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaa 565  Q
    ||||||||| ||||| |||| ||||||||| |||||||  |||  ||||||||||||||||||||||||| ||||||||| |||||||||    
T  2831963 ctccgtcccataatacttgacacagttgaccttattacgcatgttaatgcataattttgagcttaaatatcttgaataatatattagaaa 2831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 8373697 - 8373577
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||| ||||||||||||||  ||| |||||||||   ||||| |||  |||||  ||||||| || |||||||| ||||||||| |||| ||||||    
T  8373697 aatactccatccgtcccttaataagtgacacagttgacccaattacgtatatcaatgtgtaattttaagtttaaatatcttgaataatatattggaaaaa 8373598  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  8373597 attatgaaaatttgatatttt 8373577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 16646509 - 16646389
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||| ||||||||||||||  ||| |||||||||   |||||  ||  |||||||||||||| ||||||||||| ||||||||| |  || |||||    
T  16646509 aatactccttccgtcccttaatacatgatacagttgactccattacgcatttcaatgcataattttaagcttaaatatcttgaataatatgataaaaaaa 16646410  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  16646409 attatgaaaatttgatatttt 16646389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 472 - 588
Target Start/End: Original strand, 22718347 - 22718463
Alignment:
Q  472 ctccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaattta 571  Q
    ||||||||| |||||||||  ||| |||||||||   |||||  ||  |||| ||||||||||||||||||||| ||||||||| | ||||||||| | |    
T  22718347 ctccctccgccccttaatacatgatacagttgactccattacgcattccaatacataattttgagcttaaatatcttgaataatatgttagaaaaaatca 22718446  T
Q  572 tgaaaatttgatatttt 588  Q
    |||||||||||||||||    
T  22718447 tgaaaatttgatatttt 22718463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 470 - 586
Target Start/End: Complemental strand, 40471997 - 40471881
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||  ||||| |    
T  40471997 tactccctccgtcccttaataaatgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattgaaaaaaat 40471898  T
Q  570 tatgaaaatttgatatt 586  Q
    |||||||||||||||||    
T  40471897 tatgaaaatttgatatt 40471881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 1748973 - 1749092
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||| ||||||  |||   |||||||   ||||| |||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||     
T  1748973 atactccctccgtcctttaataagtgacctagttgacccaattacgtataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaa 1749072  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  1749073 ttatgaaaatttgatatttt 1749092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 31603218 - 31603336
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||   ||||   ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||||    
T  31603218 atactccctccgtcccttaataagtgacacagttgacccaattaggcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaat 31603317  T
Q  569 ttatgaaaatttgatatttt 588  Q
    | ||||||||||||||||||    
T  31603318 t-atgaaaatttgatatttt 31603336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 497 - 588
Target Start/End: Complemental strand, 45036597 - 45036506
Alignment:
Q  497 acagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||  |||||| |||  |||||||||||||| || |||||||| || |||||| ||||||||||| ||||||||||||||||||||    
T  45036597 acagttgaccctattacgtataccaatgcataattttaagtttaaatatcttaaataatatattagaaaaaattatgaaaatttgatatttt 45036506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 11277795 - 11277677
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||||||||    |||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||  ||||| |    
T  11277795 tactccctccgtcccttaataagtgatacagttgatgaaattacgcataccaatgcgtaattttgagtttaaatattttgaataatatattgaaaaaaat 11277696  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  11277695 tatgaaaatttgatatttt 11277677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 16125885 - 16126002
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||| ||| |||||||  ||| ||||||||| | |||||  ||  |||||||||||||||| ||||||||| ||||||||| |||| |||||| |    
T  16125885 tactccctctgtctcttaatacatgagacagttgacctaattacgcatatcaatgcataattttgaccttaaatatcttgaataatatatttgaaaaa-t 16125983  T
Q  570 tatgaaaatttgatatttt 588  Q
    || ||||||||||||||||    
T  16125984 tacgaaaatttgatatttt 16126002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 16127583 - 16127700
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||| ||||||||||  ||| ||| ||||| | |||||  ||| ||||||||||||| || ||||||||| || |||||| |||| |||||| |    
T  16127583 tactccctccctcccttaatacatgacacaattgacctaattacgcatgccaatgcataatttggaccttaaatatcttaaataatatatttgaaaaa-t 16127681  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  16127682 tatgaaaatttgatatttt 16127700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 16333740 - 16333623
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||| ||| |||||||  ||| ||||||||| | |||||  ||  |||||||||||||||| ||||||||| ||||||||| |||| |||||| |    
T  16333740 tactccctctgtctcttaatacatgagacagttgacctaattacgcataccaatgcataattttgaccttaaatatcttgaataatatatttgaaaaa-t 16333642  T
Q  570 tatgaaaatttgatatttt 588  Q
    || ||||||||||||||||    
T  16333641 tacgaaaatttgatatttt 16333623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 42754157 - 42754275
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||  |||||||||| |||||||| ||||||||| ||||  ||||| |    
T  42754157 tactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgtgtaattttgagtttaaatatcttgaataatatattgaaaaaaat 42754256  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  42754257 tatgaaaatttgatatttt 42754275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 38963999 - 38963938
Alignment:
Q  527 taattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  38963999 taattttgagtttaaatatcttgaataatatattagaaaaaattatgaaaatttgatatttt 38963938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 4137620 - 4137548
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||| |||||||||| |||||||| ||||||||| |||  |||||| ||||||||||||||||||||||||    
T  4137620 caatgcgtaattttgagtttaaatatcttgaataatatatcggaaaaaattatgaaaatttgatattttaaaa 4137548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 524 - 584
Target Start/End: Original strand, 11383901 - 11383961
Alignment:
Q  524 gcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgata 584  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  11383901 gcataattttgagtttaaatatcttgaataatatattagaaaaacttatgaaaatttgata 11383961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 12209200 - 12209132
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||| ||||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  12209200 caatgtataattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 12209132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 527 - 588
Target Start/End: Original strand, 37987795 - 37987856
Alignment:
Q  527 taattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  37987795 taattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 37987856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 520 - 592
Target Start/End: Original strand, 45001736 - 45001808
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatg-aaaatttgatattttaaaa 592  Q
    ||||||| |||||||| |||||||||||| |||||| ||||||||||| ||||| |||||||||||||||||||    
T  45001736 caatgcacaattttgaacttaaatatatttaataatttattagaaaaa-ttatgaaaaatttgatattttaaaa 45001808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 528 - 592
Target Start/End: Original strand, 8924599 - 8924663
Alignment:
Q  528 aattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||| ||||||||| || |||||| ||||||||||| |||| |||||||||||||||||||    
T  8924599 aattttgatcttaaatatctttaataatctattagaaaaaattataaaaatttgatattttaaaa 8924663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 7724412 - 7724531
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat- 568  Q
    ||||||||| |||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||| | |||||||| ||||||||| |||| ||||||      
T  7724412 tactccctctgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgggtttaaatatcttgaataatatattggaaaaaaa 7724511  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  7724512 ttatgaaaatttgatatttt 7724531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 497 - 592
Target Start/End: Original strand, 33046064 - 33046159
Alignment:
Q  497 acagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||||| |||| ||| ||  ||||||||||||| || ||||||||  || | |||| ||||||||||| |||| |||||||||||||||||||    
T  33046064 acagttgactttataacacataccaatgcataatttcgatcttaaataactttactaatctattagaaaaaattataaaaatttgatattttaaaa 33046159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 520 - 584
Target Start/End: Complemental strand, 6075336 - 6075272
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgata 584  Q
    |||||||||||||| | ||||||||| ||||||||| |  |||||||| ||||||||||||||||    
T  6075336 caatgcataattttaaacttaaatattttgaataatatgctagaaaaaattatgaaaatttgata 6075272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 41465289 - 41465217
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||| |||||||| ||||| | | || |||||| ||||||||||| |||||||||||| |||||||||||    
T  41465289 caatgcacaattttgaacttaagtgtttttaataatctattagaaaaaattatgaaaattttatattttaaaa 41465217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 587
Target Start/End: Complemental strand, 19637963 - 19637897
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattt 587  Q
    |||| |||||||||| ||||||||| || |||||| ||||| |||||| ||||||||||| ||||||    
T  19637963 aatgtataattttgatcttaaatattttaaataatttattaaaaaaatatatgaaaatttaatattt 19637897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 587
Target Start/End: Complemental strand, 19836556 - 19836490
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattt 587  Q
    |||| |||||||||| ||||||||| || |||||| ||||| |||||| ||||||||||| ||||||    
T  19836556 aatgtataattttgatcttaaatattttaaataatttattaaaaaaatatatgaaaatttaatattt 19836490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 530 - 592
Target Start/End: Original strand, 38934893 - 38934954
Alignment:
Q  530 ttttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||| ||||||||| || |||| | ||||||||||||| ||||||||||||||||||||||    
T  38934893 ttttgatcttaaatatttttaatagtatattagaaaaatt-atgaaaatttgatattttaaaa 38934954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 588
Target Start/End: Complemental strand, 8896505 - 8896414
Alignment:
Q  497 acagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtatta-gaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||  ||||||| ||| |||||||||||||||||  ||||||| || |||||| || ||  ||||| ||||||||||||||||||||    
T  8896505 acagttgaccctattacacatgtcaatgcataattttgaggctaaatatctt-aataatataatataaaaaaattatgaaaatttgatatttt 8896414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 592
Target Start/End: Complemental strand, 25762428 - 25762333
Alignment:
Q  497 acagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||||||| | ||| ||  ||||||| ||||||||  |||||||  || | |||| | ||||||||| |||| |||||||||||||||||||    
T  25762428 acagttgacattgtcacacatatcaatgcacaattttgatattaaataattttattaatcttttagaaaaaattataaaaatttgatattttaaaa 25762333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 588
Target Start/End: Complemental strand, 24853463 - 24853392
Alignment:
Q  515 tatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| |||||||||||||||| ||||||||| || |||| | ||||  ||||| |||| |||||||||||||||    
T  24853463 tatgccaatgcataattttgaacttaaatatctttaatattctatt--aaaaaattatcaaaatttgatatttt 24853392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 592
Target Start/End: Original strand, 5861425 - 5861489
Alignment:
Q  528 aattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||| ||||||||| || ||| ||| |||| |||||  |||||||||||| ||||||||||    
T  5861425 aattttgaacttaaatatttttaattatgcattataaaaaaatatgaaaatttgttattttaaaa 5861489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 520 - 592
Target Start/End: Original strand, 15770934 - 15771006
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||| |||||||||||  |||||||  || | |||| ||| ||||||| |||| |||||||||||||||||||    
T  15770934 caatacataattttgactttaaataactttactaatctataagaaaaaattataaaaatttgatattttaaaa 15771006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 6e-51; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 9136465 - 9136587
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  9136465 tactctctccgtcccttaatatttgaaacagttgaccttattatatatgacaatacataattttgagtttaaatatattgaataatgtattagaaaaatt 9136564  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||||||    
T  9136565 tatgaaaatttgatattttaaaa 9136587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 38442075 - 38441956
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||| ||||| ||||||||||||| ||||||||| ||| ||| |||   ||||||||||||||||||||||||| ||||||||| ||||| |||||     
T  38442075 atactccatccgttccttaatatttgacacagttgactttactacgtatattaatgcataattttgagcttaaatatcttgaataatatattaaaaaaaa 38441976  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  38441975 ttatgaaaatttgatatttt 38441956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 475 - 588
Target Start/End: Original strand, 41007765 - 41007878
Alignment:
Q  475 cctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatga 574  Q
    |||||||||| ||||| |||| ||||||||| ||||||| |||| ||||| ||||||||||| |||||||| ||||||||| ||||| ||||| ||||||    
T  41007765 cctccgtcccataatacttgacacagttgaccttattacgtatgtcaatgtataattttgagtttaaatatcttgaataatatattataaaaaattatga 41007864  T
Q  575 aaatttgatatttt 588  Q
    ||||||||||||||    
T  41007865 aaatttgatatttt 41007878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 47713233 - 47713353
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||  ||| |||||||||| |||||||||||||||  |||||||| ||||| |||||    
T  47713233 aatactccctccgtcccataatatttgacacaattgaccttattacgcatgtcaatgcataactttgagcttaaatatcgtgaataatatattataaaaa 47713332  T
Q  568 tttatgaaaatttgatatttt 588  Q
     |||||| |||||||||||||    
T  47713333 attatgacaatttgatatttt 47713353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 48448779 - 48448661
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||| ||||||||||  ||| |||||||||   |||||| ||   ||||||||||||||||||||||||| ||||||||| ||||||||||| |    
T  48448779 tactccctccatcccttaatacatgacacagttgacccaattacacatactaatgcataattttgagcttaaatatcttgaataatatattagaaaaaat 48448680  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  48448679 tatgaaaatttgatatttt 48448661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 29247888 - 29247770
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||  ||| ||||| | || ||||| ||||||||| ||||||||| |||||  |||| |    
T  29247888 tactccctccgtcccttaatacttgacacagttgaccttattacgcatgtcaatgtacaactttgaacttaaatatcttgaataatatattaagaaaaat 29247789  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  29247788 tatgaaaatttgatatttt 29247770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 592
Target Start/End: Original strand, 35693631 - 35693755
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||| ||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||    
T  35693631 aatactcccttcgtcccttaataagtgacacagttgacccaattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaa 35693730  T
Q  568 tttatgaaaatttgatattttaaaa 592  Q
     ||||||||||||||||||||||||    
T  35693731 attatgaaaatttgatattttaaaa 35693755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 32972138 - 32972256
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||||||||    |||||  ||   ||||||||||||||||||||||||| ||||||||| | ||||||||| |    
T  32972138 tactccctccgtcccttaataaatgacacagttgattccattacgcattctaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaat 32972237  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  32972238 tatgaaaatttgatatttt 32972256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 497 - 588
Target Start/End: Original strand, 40818525 - 40818618
Alignment:
Q  497 acagttgacattattacatatgacaatgcataattttgagcttaaatatat--tgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||  ||||||||||  |||||||||||||||||||| |||||||  |||||||| ||||||||||| ||||||||||||||||||||    
T  40818525 acagttgaccctattacatataccaatgcataattttgagcttcaatatatcttgaataatatattagaaaaaattatgaaaatttgatatttt 40818618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 471 - 588
Target Start/End: Complemental strand, 18756848 - 18756732
Alignment:
Q  471 actccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaattt 570  Q
    |||||||||||||| |||||  ||| ||||||||| | |||||  ||  ||||||||||||||||| |||| ||| ||||||||| ||||||||||| ||    
T  18756848 actccctccgtcccataatacatgacacagttgacct-attacgcatatcaatgcataattttgagtttaactattttgaataatatattagaaaaaatt 18756750  T
Q  571 atgaaaatttgatatttt 588  Q
    ||||||||||||||||||    
T  18756749 atgaaaatttgatatttt 18756732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 487 - 588
Target Start/End: Original strand, 31496467 - 31496566
Alignment:
Q  487 aatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatt 586  Q
    ||||||||| ||||||||| |||||||  ||| |||||||||||||||| ||||||||| ||||||||  ||||||||||| ||||||||||||||||||    
T  31496467 aatatttgatacagttgaccttattacgcatgtcaatgcataattttgaacttaaatatcttgaataa-atattagaaaaa-ttatgaaaatttgatatt 31496564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 475 - 588
Target Start/End: Complemental strand, 33377030 - 33376918
Alignment:
Q  475 cctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatga 574  Q
    |||||||||| ||||| || | ||||||||| || ||| ||||| ||||| |||| ||||||||||||||| ||||||||| ||||||||||| |||| |    
T  33377030 cctccgtcccataatacttaatacagttgactttgttatatatgtcaatgtataactttgagcttaaatatcttgaataatatattagaaaaa-ttataa 33376932  T
Q  575 aaatttgatatttt 588  Q
    ||||||||||||||    
T  33376931 aaatttgatatttt 33376918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 36820139 - 36820019
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| ||||||||  |||||||| |||| ||||||    
T  36820139 aatactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcatgaataatatattggaaaaa 36820040  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  36820039 attatgaaaatttgatatttt 36820019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 492 - 588
Target Start/End: Original strand, 46242303 - 46242399
Alignment:
Q  492 ttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| ||||||||| |||||||  |||| ||||||||| ||||||||||||||| || |||||| ||| ||||||| ||||||||||||||||||||    
T  46242303 ttgacacagttgaccttattacgcatgataatgcataactttgagcttaaatatcttaaataatatatcagaaaaaattatgaaaatttgatatttt 46242399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 497 - 588
Target Start/End: Original strand, 9173166 - 9173257
Alignment:
Q  497 acagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||  ||||||  ||| |||||||||||||||| ||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||    
T  9173166 acagttgaccctattacgcatgtcaatgcataattttgaacttaaatatcttgaataatatattataaaaaattatgaaaatttgatatttt 9173257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 16806948 - 16807067
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||| |||||||  ||| |||||||||   |||||  ||  ||||||||||||||||| |||||||| ||||||||| |||| ||||||     
T  16806948 atactccctccgtcacttaataagtgacacagttgacccaattacgcataccaatgcataattttgagtttaaatatcttgaataatatattggaaaaaa 16807047  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||| ||||||||    
T  16807048 ttatgaaaattagatatttt 16807067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 592
Target Start/End: Complemental strand, 19327576 - 19327454
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||  ||||||||||  ||| |||||||||   ||||  |||  |||||||||||||||| ||||||||| ||||||||| | ||||||||| |    
T  19327576 tactccctctctcccttaatacatgacacagttgactccattatgtattccaatgcataattttgaacttaaatatcttgaataatatgttagaaaaaat 19327477  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
     ||||||||||||||||||||||    
T  19327476 catgaaaatttgatattttaaaa 19327454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 486 - 588
Target Start/End: Complemental strand, 19817580 - 19817478
Alignment:
Q  486 taatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatat 585  Q
    ||||| |||| | ||||||| |||||||  |||  ||||||||||||| || |||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  19817580 taatacttgacatagttgaccttattacgcatgctaatgcataattttaagtttaaatatcttgaataatatattagaaaaaattatgaaaatttgatat 19817481  T
Q  586 ttt 588  Q
    |||    
T  19817480 ttt 19817478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 32345586 - 32345704
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||| ||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  32345586 tactccatccgtcccttaataagtgacacagttgactcaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 32345685  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  32345686 tatgaaaatttgatatttt 32345704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 486 - 588
Target Start/End: Original strand, 36404745 - 36404847
Alignment:
Q  486 taatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatat 585  Q
    ||||| |||| ||||||||  || ||||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||    
T  36404745 taatagttgacacagttgatttttttacgcatgtcaatgcataactttgagcttaaatatattgaataatatattagaaaaaattagaaaaatttgatat 36404844  T
Q  586 ttt 588  Q
    |||    
T  36404845 ttt 36404847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 592
Target Start/End: Complemental strand, 38069312 - 38069190
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||| |||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| || |||||| |||| |||||| |    
T  38069312 tactccctcagtcccttaataagtgacacagttgacccaattacgcatatcaatgcgtaattttgagtttaaatatcttaaataatatattggaaaaaat 38069213  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||||||    
T  38069212 tatgaaaatttgatattttaaaa 38069190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 526 - 588
Target Start/End: Complemental strand, 38850907 - 38850845
Alignment:
Q  526 ataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  38850907 ataattttgagcttaaatatcttgaataatatattagaaaaaattatgaaaatttgatatttt 38850845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 5842380 - 5842260
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaa-aaa 567  Q
    ||||||| |||||||| |||||  ||| |||||||||  ||||||  ||| |||||||||||||||||||||||||| ||||||||| ||||||||        
T  5842380 atactccttccgtcccataatacatgacacagttgaccatattacgaatgtcaatgcataattttgagcttaaatatcttgaataatatattagaatttt 5842281  T
Q  568 tttatgaaaatttgatatttt 588  Q
    ||| |||||||||||||||||    
T  5842280 tttttgaaaatttgatatttt 5842260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 592
Target Start/End: Original strand, 25273870 - 25273942
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||||||    
T  25273870 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatattttaaaa 25273942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 481 - 574
Target Start/End: Original strand, 3123960 - 3124053
Alignment:
Q  481 tcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatga 574  Q
    |||| ||||| |||| ||||||||| |||||||  ||| |||||||||  ||||||||||||||| ||||||||| ||||||||||| ||||||    
T  3123960 tcccataatacttgacacagttgaccttattacgcatgtcaatgcatatctttgagcttaaatatcttgaataatatattagaaaaaattatga 3124053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 41845032 - 41844912
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgta-ttagaaaaa 567  Q
    ||||||||||| |||||||||| || | ||| ||||| |||||||  ||   ||||||||| ||||||||||||||| || |||||| || |||| ||||    
T  41845032 atactccctccatcccttaatacttaacacatttgaccttattacgcattttaatgcataactttgagcttaaatatcttcaataatatatttaggaaaa 41844933  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  41844932 attatgaaaatttgatatttt 41844912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 521 - 588
Target Start/End: Complemental strand, 4620274 - 4620208
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||||||||| |||||||| ||||||||| ||||||||||| |||| |||||||||||||||    
T  4620274 aatgcataattttgagtttaaatatcttgaataatatattagaaaaaattat-aaaatttgatatttt 4620208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 38259741 - 38259623
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||| ||||||||||||||| ||| | ||||||| | |||| | ||  |||||||||||||| || |||||| | ||||||||| | ||||||||| |    
T  38259741 tactccatccgtcccttaatatatgacatagttgacttcattatacatttcaatgcataattttaagtttaaatgtcttgaataatatgttagaaaaaat 38259642  T
Q  570 tatgaaaatttgatatttt 588  Q
     || |||||||||||||||    
T  38259641 cataaaaatttgatatttt 38259623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 47080828 - 47080756
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||| ||||||||  || | |||| ||||||||||| |||| |||||||||||||||||||    
T  47080828 caatgcataattttgatcttaaataactttactaatctattagaaaaaattataaaaatttgatattttaaaa 47080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 27621149 - 27621216
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||| ||||    
T  27621149 aatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatttttt 27621216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 592
Target Start/End: Complemental strand, 32222811 - 32222689
Alignment:
Q  472 ctccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtat--tagaaaaatt 569  Q
    |||||||| | |||||||| |||| ||  ||||| ||||| | |||| |||| ||||| |||||| |||| ||| ||||||||| |||  |||||||| |    
T  32222811 ctccctccctaccttaatacttgacacgcttgaccttattgcgtatgtcaatacataactttgagtttaattatcttgaataatatatattagaaaaaat 32222712  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||| ||||||||||||    
T  32222711 tatgaaaattcgatattttaaaa 32222689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 562
Target Start/End: Original strand, 25571494 - 25571587
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattag 562  Q
    ||||||||| |||||| |||||  ||| |||||||||  ||||||  ||| |||| ||||||||| ||||||||||| ||||||||| ||||||    
T  25571494 atactcccttcgtcccataatacgtgacacagttgaccctattacgaatgtcaatacataattttaagcttaaatatcttgaataatatattag 25571587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 30462074 - 30462142
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| ||||||| || |||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  30462074 caatgcgtaattttaagtttaaatatcttgaataatatattgtaaaaaattatgaaaatttgatatttt 30462142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 470 - 545
Target Start/End: Original strand, 37099679 - 37099754
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatat 545  Q
    |||| |||||||||| ||||| |||| ||||||||  |||||||  ||| ||||||||||||||||| ||||||||    
T  37099679 tacttcctccgtcccataatacttgacacagttgatcttattacgcatgtcaatgcataattttgagattaaatat 37099754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 38353401 - 38353523
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||| ||||| |||||  ||| ||||||||   |||||   ||| |||||||||||  | || |||||||| ||||||||| | ||| ||||| |    
T  38353401 tactccctctgtcccataatacatgacacagttgattctattatgcatgccaatgcataatactaagtttaaatatcttgaataatatgttataaaaaat 38353500  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    ||||||||||| |||||||||||    
T  38353501 tatgaaaattttatattttaaaa 38353523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 470 - 555
Target Start/End: Original strand, 26651051 - 26651136
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataat 555  Q
    ||||||||||||||| |||||  ||| |||||||||  ||||||  ||  |||  ||||||||||||||||||||| |||||||||    
T  26651051 tactccctccgtcccataataaatgacacagttgaccctattacgcataccaaaacataattttgagcttaaatatcttgaataat 26651136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 547 - 592
Target Start/End: Complemental strand, 48796354 - 48796309
Alignment:
Q  547 ttgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||    
T  48796354 ttgaataatgtattagaaaaaattatgaaaattgaatattttaaaa 48796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 592
Target Start/End: Original strand, 14543645 - 14543708
Alignment:
Q  528 aattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||||| |||||||| || |||||| ||||||||||| |||||||| |||||||||| ||||    
T  14543645 aattttgagtttaaatatctttaataatctattagaaaaa-ttatgaaattttgatatttaaaaa 14543708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 520 - 592
Target Start/End: Original strand, 38198531 - 38198603
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||||| |||| | ||| |||||||| ||| ||||||| |||||| |||||||||||| |||||| ||||    
T  38198531 caatgcatattttttatctttaatatatttaattatgtatttgaaaaaattatgaaaatttaatatttgaaaa 38198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 27248699 - 27248766
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||| ||||||||  || | |||| ||||||||||| |||| |||||||||||||||    
T  27248699 aatgcacaattttgatcttaaataacttaactaatctattagaaaaaattataaaaatttgatatttt 27248766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 588
Target Start/End: Complemental strand, 40232112 - 40232071
Alignment:
Q  547 ttgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||| |||| |||||| ||||||||||||||||||||    
T  40232112 ttgaataatatattggaaaaaattatgaaaatttgatatttt 40232071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 7312951 - 7313019
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| ||| ||||||| ||||||||  || | |||| ||||||||||| |||| |||||||||||||||    
T  7312951 caattcatcattttgatcttaaataactttattaatttattagaaaaaattataaaaatttgatatttt 7313019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 560 - 592
Target Start/End: Complemental strand, 28016286 - 28016254
Alignment:
Q  560 tagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||| ||||||||||||||||||||||||    
T  28016286 tagaaaaaattatgaaaatttgatattttaaaa 28016254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 561
Target Start/End: Complemental strand, 28016672 - 28016581
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtatta 561  Q
    ||||||||| |||||| |||||  ||| |||||| ||  ||||||  ||  ||||||||||||| |||||||||||| ||||||||| |||||    
T  28016672 atactcccttcgtcccataatacatgacacagttaactctattacgcataccaatgcataattt-gagcttaaatatcttgaataatatatta 28016581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 540
Target Start/End: Complemental strand, 39174065 - 39174005
Alignment:
Q  480 gtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagctta 540  Q
    ||||| ||||| |||| ||||||||| |||||||||||| | ||| |||||||||| ||||    
T  39174065 gtcccataatacttgacacagttgaccttattacatatgccgatgtataattttgacctta 39174005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 5117239 - 5117359
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||||||||||||||||||| |||| ||||||||  |||||||  ||| |||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  5117239 aatactccctccgtcccttaatacttgacacagttgaacttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattagaaaaa 5117338  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  5117339 attatgaaaatttgatatttt 5117359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 470 - 592
Target Start/End: Complemental strand, 47912542 - 47912420
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||| ||||| |||  ||| ||||| ||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||| ||||| |    
T  47912542 tactccctccgtcccataatacttgccacaattgaccttattacgtatgtcaatgcataattttgagcttaaatattttgaataatatattataaaaaat 47912443  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||||||    
T  47912442 tatgaaaatttgatattttaaaa 47912420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 8250648 - 8250768
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  ||| ||||||||| | ||||| |||  ||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  8250648 aatactccctccgtcccttaataagtgacacagttgacctaattacgtataccaatgcataattttgagtttaaatatcttgaataatatattagaaaaa 8250747  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  8250748 attatgaaaatttgatatttt 8250768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 44963478 - 44963597
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||||||||||| |||| | ||||||| |||||||  ||| |||| ||||| ||||||||||||||| ||||||||| |||||||||||     
T  44963478 atactccctccgtcccttaatacttgacatagttgaccttattacgcatgtcaatacataactttgagcttaaatatcttgaataatatattagaaaaaa 44963577  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  44963578 ttatgaaaatttgatatttt 44963597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 23393493 - 23393375
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||| |||||||||||||||||||||||||| ||||||||| | ||||||||| |    
T  23393493 tactccctccgtcccttaataaatgacacagttgactcaattacgcatgccaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaat 23393394  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  23393393 tatgaaaatttgatatttt 23393375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 26476814 - 26476934
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||| |||||||| |||| ||||||||| |||||||  ||| |||| |||||||||||| |||||||| ||||||||| |||||  ||||    
T  26476814 aatactccctccgttccttaatacttgacacagttgaccttattacgcatgtcaatacataattttgagtttaaatatcttgaataatatattatgaaaa 26476913  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  26476914 attatgaaaatttgatatttt 26476934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 25815782 - 25815667
Alignment:
Q  477 tccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaa 576  Q
    |||||||||||||| |||| ||||||||  ||||||| |||  ||||||||||||||||| |||||||| ||||||| | ||||||||||| |||| |||    
T  25815782 tccgtcccttaatagttgacacagttgatcttattacgtatctcaatgcataattttgaggttaaatatcttgaatagtatattagaaaaaattataaaa 25815683  T
Q  577 atttgatattttaaaa 592  Q
    ||||||||||||||||    
T  25815682 atttgatattttaaaa 25815667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 40058774 - 40058892
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||| | ||||| |||| ||||||||| |||||||  ||| |||||||||| |||||| |||||||  ||||||||| ||||||||||| |    
T  40058774 tactccctccgtctcataatacttgacacagttgaccttattacgcatgtcaatgcataactttgagtttaaatactttgaataatatattagaaaaaat 40058873  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  40058874 tatgaaaatttgatatttt 40058892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 470 - 592
Target Start/End: Complemental strand, 48312289 - 48312167
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||| |||||||| ||||| || | |||||| || ||||||   ||| |||||||||||||||||||||||||| ||||||||| ||||||||||| |    
T  48312289 tactccttccgtcccataatacttaacacagtttaccttattatgcatgtcaatgcataattttgagcttaaatattttgaataatatattagaaaaaat 48312190  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||| ||||||    
T  48312189 tatgaaaatttgatatattaaaa 48312167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 486 - 588
Target Start/End: Complemental strand, 52688776 - 52688674
Alignment:
Q  486 taatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatat 585  Q
    ||||| |||| ||| ||||| |||||| | ||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  52688776 taatacttgacacaattgaccttattatacatgtcaatgcataactttgagcttaaatatattgaataatatattagaaaaaattatgaaaatttgatat 52688677  T
Q  586 ttt 588  Q
    |||    
T  52688676 ttt 52688674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 41414466 - 41414346
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||| ||| ||||||||||| ||| |||||||||   ||||| |||  |||||||||||||||||||||||||| ||||||||| | |||||||||    
T  41414466 aatactccatccatcccttaatatatgacacagttgactcaattacgtatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaaa 41414367  T
Q  568 tttatgaaaatttgatatttt 588  Q
     | ||||||||||||||||||    
T  41414366 atcatgaaaatttgatatttt 41414346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 481 - 588
Target Start/End: Original strand, 43452983 - 43453090
Alignment:
Q  481 tcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaattt 580  Q
    |||||||||| |||| ||||||||| |||||||  ||  ||||||||||||||||| |||||||| ||||||||| ||||||||||| |||| |||||||    
T  43452983 tcccttaatacttgacacagttgaccttattacgcatatcaatgcataattttgagtttaaatatcttgaataatatattagaaaaaattataaaaattt 43453082  T
Q  581 gatatttt 588  Q
    ||||||||    
T  43453083 gatatttt 43453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 10100320 - 10100438
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||||||||| | |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  10100320 tactccctccgtcccttaataagtgacacagttgacctaattacgcatatcaatgcgtaattttgagtttaaatattttgaataatatattggaaaaaat 10100419  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  10100420 tatgaaaatttgatatttt 10100438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 31651708 - 31651826
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||| |||||  ||| |||||||||  ||||||  ||  |||||||||||||||||||||||||| ||||||||| ||||| ||||| |    
T  31651708 tactccctccgtcccataataaatgacacagttgaccctattacgcataccaatgcataattttgagcttaaatatcttgaataatatattataaaaaat 31651807  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||| ||||||||||    
T  31651808 tatgaaaaattgatatttt 31651826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 10124372 - 10124252
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||    
T  10124372 aatactccctccgtcccttaataagtgacacagttgactcaattacgcatatcaatgcgtaattttgagtttaaatattttgaataatatattggaaaaa 10124273  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  10124272 attatgaaaatttgatatttt 10124252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 50014366 - 50014486
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  ||| |||| ||||   |||||||||  |||||||||||| |||| |||||||| ||||||||| | |||||||||    
T  50014366 aatactccctccgtcccttaatacatgacacaggtgactccattacatattccaatgcataattctgagtttaaatatcttgaataatatgttagaaaaa 50014465  T
Q  568 tttatgaaaatttgatatttt 588  Q
     | ||||||||||||||||||    
T  50014466 atcatgaaaatttgatatttt 50014486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 5606198 - 5606316
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  5606198 tactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcttaattttgagtttaaatatcttgaataatatattggaaaaaat 5606297  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  5606298 tatgaaaatttgatatttt 5606316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 8048555 - 8048673
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  ||||||||| |||||||||||||||| ||||||||| | ||||||||| |    
T  8048555 tactccctccgtcccttaatacatgacacagttgactccattacgcattccaatgcatatttttgagcttaaatatcttgaataatatgttagaaaaaat 8048654  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  8048655 catgaaaatttgatatttt 8048673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 44240780 - 44240662
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||||| |||   |||||  ||  |||||||||||||||||||||||||||||||||||| | ||||||||| |    
T  44240780 tactccctccgtcccttaataaatgacacagtggactcaattacgcatttcaatgcataattttgagcttaaatatattgaataatatgttagaaaaaat 44240681  T
Q  570 tatgaaaatttgatatttt 588  Q
     || |||||||||||||||    
T  44240680 cataaaaatttgatatttt 44240662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 470 - 555
Target Start/End: Original strand, 12685736 - 12685821
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataat 555  Q
    ||||||||||||||  ||||| |||| ||||||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  12685736 tactccctccgtcctataatacttgacacagttgaccttattacacatgtcaatgcataattttgagcttaaatatcttgaataat 12685821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 4489272 - 4489204
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||    
T  4489272 caatgcataattttgagcttaaatatcttgaataatatgttagaaaaaattatgaaaatttgatatttt 4489204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 477 - 588
Target Start/End: Original strand, 1821443 - 1821553
Alignment:
Q  477 tccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaa 576  Q
    |||||| |||||||  ||| |||||||||   ||||| |||  |||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||    
T  1821443 tccgtctcttaatacatgacacagttgacccaattacgtataccaatgcataattttgagcttaaatatcttgaataatatattagaaaaa-ttacgaaa 1821541  T
Q  577 atttgatatttt 588  Q
    ||||||||||||    
T  1821542 atttgatatttt 1821553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 31931985 - 31932103
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||| ||||||||  ||| ||||||||   ||||||  ||| |||| ||||||||||||||||||||| ||||||||| | ||| |||||     
T  31931985 atactccctccgttccttaatacatgacacagttgattctattacgcatgccaatacataattttgagcttaaatatcttgaataatatgtta-aaaaaa 31932083  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  31932084 ttatgaaaatttgatatttt 31932103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 473 - 588
Target Start/End: Original strand, 49903496 - 49903610
Alignment:
Q  473 tccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttat 572  Q
    ||||| |||||| |||||||||| | ||||||| |||||||  |||  ||| |||||||||||||||| |||| ||||||||| ||||||||||| ||||    
T  49903496 tcccttcgtcccataatatttgatatagttgactttattacgcatgcaaattcataattttgagcttacatatcttgaataatatattagaaaaaattat 49903595  T
Q  573 gaaaatttgatatttt 588  Q
    ||||| ||||||||||    
T  49903596 gaaaa-ttgatatttt 49903610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 28490421 - 28490303
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||| ||||||   || |||||||||   |||||  ||  |||||||||||||||||||||||||| ||||||||| | ||||||||| |    
T  28490421 tactccctccgtcctttaatacaggacacagttgactccattacgcattccaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaat 28490322  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  28490321 catgaaaatttgatatttt 28490303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 38786753 - 38786875
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||| |||||  ||| ||| |||||  ||||||  ||  |||| |||||||||||| |||||||| || |||||| ||||||||||| |    
T  38786753 tactccctccgtcccataatacatgacacaattgaccctattacgcatatcaatacataattttgagtttaaatatctttaataatatattagaaaaaat 38786852  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||| ||||||||||||||    
T  38786853 tatgaaaaattgatattttaaaa 38786875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 41855529 - 41855646
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||||||||||||| ||||||||| ||||||||| | ||||||||| |    
T  41855529 tactccctccgtcccttaataaatgacacagttgactccattacgcatttcaatgcataattttga-cttaaatatcttgaataatatgttagaaaaaat 41855627  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  41855628 catgaaaatttgatatttt 41855646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 44741604 - 44741486
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||||||||    |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  44741604 tactccctccgtcccttaataagtgacacagttgatccaattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 44741505  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  44741504 tatgaaaatttgatatttt 44741486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 475 - 588
Target Start/End: Original strand, 7075142 - 7075255
Alignment:
Q  475 cctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatga 574  Q
    ||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||    
T  7075142 cctccgtcccttaataagtgacacagttgacccaattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatga 7075241  T
Q  575 aaatttgatatttt 588  Q
    ||||||||||||||    
T  7075242 aaatttgatatttt 7075255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 5946027 - 5945908
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||| |||||||  |||   ||||||| | |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||     
T  5946027 atactccctccgtctcttaataagtgatctagttgacctaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaa 5945928  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  5945927 ttatgaaaatttgatatttt 5945908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 481 - 592
Target Start/End: Original strand, 10648017 - 10648127
Alignment:
Q  481 tcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaattt 580  Q
    |||| ||||| |||| ||||||||| ||||||| |||   | || ||||||||||| |||||||| ||||||||| ||||| ||||| ||||||||||||    
T  10648017 tcccataatacttgacacagttgaccttattacgtatttta-tgtataattttgagtttaaatatcttgaataatatattaaaaaaaattatgaaaattt 10648115  T
Q  581 gatattttaaaa 592  Q
    ||||||||||||    
T  10648116 gatattttaaaa 10648127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 497 - 588
Target Start/End: Original strand, 33525997 - 33526087
Alignment:
Q  497 acagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||| |||||| ||||  |||| |||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||| ||||||    
T  33525997 acagttgaccttattatatataccaatacataattttgagtttaaatat-ttgaataatatattagaaaaaattatgaaaatttgttatttt 33526087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 9334642 - 9334524
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||| |||||||||||||||  ||| ||||||||| | |||||  ||   | ||||||||||||||||||||||| ||||| ||| | ||||||||| |    
T  9334642 tactcgctccgtcccttaatacatgacacagttgacttcattacgcattttactgcataattttgagcttaaatattttgaaaaatatgttagaaaaaat 9334543  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  9334542 catgaaaatttgatatttt 9334524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 9358415 - 9358297
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||| |||||||||||||||  ||| ||||||||| | |||||  ||   | ||||||||||||||||||||||| ||||| ||| | ||||||||| |    
T  9358415 tactcgctccgtcccttaatacatgacacagttgacttcattacgcattttactgcataattttgagcttaaatattttgaaaaatatgttagaaaaaat 9358316  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  9358315 catgaaaatttgatatttt 9358297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 468 - 592
Target Start/End: Complemental strand, 23338069 - 23337946
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||| ||| | |||| |||||  ||| |||||||||  ||||||  ||| ||||||||||||||||| |||||||| ||||||||| ||||  |||||    
T  23338069 aatacttccttcatcccataatacatgatacagttgaccatattacgcatgtcaatgcataattttgagtttaaatatcttgaataatatatt-taaaaa 23337971  T
Q  568 tttatgaaaatttgatattttaaaa 592  Q
     |||||||||||| |||||||||||    
T  23337970 attatgaaaatttcatattttaaaa 23337946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 52749492 - 52749424
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  52749492 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 52749424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 501 - 588
Target Start/End: Complemental strand, 31745971 - 31745884
Alignment:
Q  501 ttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||| |||||||  ||| |||| ||||||||| || |||||||| ||||||||| ||||| ||||| ||||||||||||||||||||    
T  31745971 ttgactttattacgaatgtcaatccataatttttaggttaaatatcttgaataatatattataaaaaattatgaaaatttgatatttt 31745884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 521 - 588
Target Start/End: Complemental strand, 40883620 - 40883554
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||||||||| ||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||    
T  40883620 aatgcataattttgaacttaaatatcttgaataatatatta-aaaaaattatgaaaatttgatatttt 40883554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 3138853 - 3138735
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||| ||||||| ||||||| || | ||| ||||  ||||||   ||| |||| ||||||||| | ||||||||| ||||||||| || |||||||| |    
T  3138853 tactctctccgtctcttaatacttaagacaattgattttattatgcatgtcaatacataattttaaacttaaatatcttgaataatatactagaaaaaat 3138754  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  3138753 tatgaaaatttgatatttt 3138735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 48389330 - 48389209
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattag-aaaa 566  Q
    |||||||||||||||| ||||||  ||| |||||||||   |||||  ||  | || ||||||||||||||||||||| ||||||||| | |||| ||||    
T  48389330 aatactccctccgtcctttaataaatgacacagttgactccattacgcatttcgatacataattttgagcttaaatatcttgaataatatgttagaaaaa 48389231  T
Q  567 atttatgaaaatttgatatttt 588  Q
    | | ||||||||||||||||||    
T  48389230 aatcatgaaaatttgatatttt 48389209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 479 - 592
Target Start/End: Original strand, 48613897 - 48614012
Alignment:
Q  479 cgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaat--aatgtattagaaaaatttatgaaa 576  Q
    |||||| ||||| |||| |||||| || |||||||  ||| ||||| |||||||||||||||||||| ||||||  ||| ||||||||||| ||||||||    
T  48613897 cgtcccataatacttgatacagttaaccttattacgcatgtcaatgtataattttgagcttaaatatcttgaataaaatatattagaaaaa-ttatgaaa 48613995  T
Q  577 a-tttgatattttaaaa 592  Q
    | ||| |||||||||||    
T  48613996 atttttatattttaaaa 48614012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 2138834 - 2138954
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||| ||||||  | | |||||||||   |||||  ||  |||||  |||||||||| |||||||| ||||||||| ||||  |||||    
T  2138834 aatactccctccgtcctttaataagtaacacagttgacccaattacgcataccaatgtgtaattttgagtttaaatatcttgaataatatattgaaaaaa 2138933  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  2138934 attatgaaaatttgatatttt 2138954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 6017306 - 6017374
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| | || |||||| ||||||||||||||||||||    
T  6017306 caatgcgtaattttgagtttaaatatcttgaataatattttggaaaaaattatgaaaatttgatatttt 6017374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 581
Target Start/End: Complemental strand, 26544130 - 26544018
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||| ||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||     
T  26544130 atactccctccgtcctttaataagtgacacagttgacccgattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaa 26544031  T
Q  569 ttatgaaaatttg 581  Q
    ||| |||||||||    
T  26544030 ttaagaaaatttg 26544018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 45299581 - 45299461
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattag-aaaaa 567  Q
    ||||| ||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| | |||||    
T  45299581 atacttcctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaa 45299482  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||| ||||||||||    
T  45299481 attatgaaaacttgatatttt 45299461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 481 - 585
Target Start/End: Original strand, 52141871 - 52141975
Alignment:
Q  481 tcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaattt 580  Q
    |||| |||||| ||| ||||||||| ||||||   ||| ||||||||| ||||||| | |||||| ||||||||| ||||||||| | ||||||||||||    
T  52141871 tcccataatatctgacacagttgaccttattatgcatgccaatgcatatttttgagttgaaatatcttgaataatatattagaaacaattatgaaaattt 52141970  T
Q  581 gatat 585  Q
     ||||    
T  52141971 tatat 52141975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 521 - 592
Target Start/End: Complemental strand, 2126865 - 2126794
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||||||||| | ||||||||| || ||| || ||||||||||| |||| |||||||||||||||||||    
T  2126865 aatgcataattttaaacttaaatattttaaattatatattagaaaaaattataaaaatttgatattttaaaa 2126794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 592
Target Start/End: Complemental strand, 8980890 - 8980813
Alignment:
Q  515 tatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||| |||| || |||||||| ||||||||| || |||||| ||||||||||| ||||||||||||| | ||||||||    
T  8980890 tatgtcaatccacaattttgaacttaaatatttttaataatctattagaaaaaattatgaaaatttgtttttttaaaa 8980813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 520 - 592
Target Start/End: Original strand, 33730054 - 33730124
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||||||||| || |||||||| ||||||||| ||||| ||||| |||||||||  |||||||||||||    
T  33730054 caatgcataattttaagtttaaatatcttgaataatatattaaaaaaaattatgaaaa--tgatattttaaaa 33730124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 36035890 - 36035829
Alignment:
Q  527 taattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||| || |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  36035890 taattttaagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 36035829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 521 - 588
Target Start/End: Complemental strand, 44452406 - 44452338
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtatt-agaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||||||| ||| ||||| |||| | |||||| |||||||| ||||||||||    
T  44452406 aatgcataattttgagcttaaatatcttggataatatattaaaaaaaatatatgaaaaattgatatttt 44452338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 588
Target Start/End: Original strand, 26345279 - 26345329
Alignment:
Q  538 ttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||| ||| |||||| ||||||||||| ||||||||||||||||||||    
T  26345279 ttaaatacatttaataatttattagaaaaaattatgaaaatttgatatttt 26345329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 469 - 557
Target Start/End: Complemental strand, 29253700 - 29253611
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagctt-aaatatattgaataatgt 557  Q
    ||||||||||||| ||||||||  ||| ||||||||| | |||||  ||   ||||||||||||||||||| |||||| |||||||||||    
T  29253700 atactccctccgttccttaatacatgacacagttgacttcattacgcatttgaatgcataattttgagcttaaaatatcttgaataatgt 29253611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 516 - 592
Target Start/End: Complemental strand, 42728844 - 42728770
Alignment:
Q  516 atgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||| ||||||||| || |||||| ||||| ||   ||||| |||||||||||||||||||    
T  42728844 atgacaatgcataattttgatcttaaatatctttaataatctatta-aattttttat-aaaatttgatattttaaaa 42728770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 592
Target Start/End: Original strand, 13971631 - 13971687
Alignment:
Q  538 ttaaatatattgaataatgtattagaaaaat--ttatgaaaatttgatattttaaaa 592  Q
    |||||||| || |||||| |||||||||||   ||||||||||||||||||||||||    
T  13971631 ttaaatatctttaataatctattagaaaaaaaattatgaaaatttgatattttaaaa 13971687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 36203791 - 36203720
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||||||||||||  || ||||||||  |||||||||||| |||| | || |||| ||||||||||||||    
T  36203791 caatgcataattttgacatttaatatatttcataatgtattagcaaaaataat-aaaagttgatattttaaaa 36203720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 7e-35; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 26801903 - 26802022
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||| ||||||||| ||||||||| |||||||||||     
T  26801903 atactccctccgtcccttaatacttgacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattagaaaaaa 26802002  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  26802003 ttatgaaaatttgatatttt 26802022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 26809453 - 26809572
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||| ||||||||| ||||||||| |||||||||||     
T  26809453 atactccctccgtcccttaatacttgacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattagaaaaaa 26809552  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  26809553 ttatgaaaatttgatatttt 26809572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 41410749 - 41410871
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||||||||| ||||  |||||||| |||||||  ||| |||||||||| ||||||||||||||| ||||||||| |||||| |||| |    
T  41410749 tactccctccgtcccttaatacttgacccagttgactttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattaggaaaaat 41410848  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||||||    
T  41410849 tatgaaaatttgatattttaaaa 41410871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 26824480 - 26824599
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||| ||||||||| ||||||||| |||||| ||||     
T  26824480 atactccctccgtcccttaatacttgacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattagtaaaaa 26824579  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  26824580 ttatgaaaatttgatatttt 26824599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 27674479 - 27674360
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||| ||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||||||||||||| |||||||||||||||| ||||     
T  27674479 atactccctcggtcccttaatacttgacacagttgaccttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatgtattaggaaaaa 27674380  T
Q  569 ttatgaaaatttgatatttt 588  Q
    |||||||||||| |||||||    
T  27674379 ttatgaaaatttaatatttt 27674360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 1831325 - 1831207
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||||||||| ||||  |||||||| |||||||  ||| |||||||||| ||||||||||||||| ||||||||| |||||| |||| |    
T  1831325 tactccctccgtcccttaatacttgacccagttgactttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattaggaaaaat 1831226  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  1831225 tatgaaaatttgatatttt 1831207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 40316792 - 40316674
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||||||||| ||||  |||||||| |||||||  ||| |||||||||| ||||||||||||||| ||||||||| |||||| |||| |    
T  40316792 tactccctccgtcccttaatacttgacccagttgactttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattaggaaaaat 40316693  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  40316692 tatgaaaatttgatatttt 40316674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 486 - 585
Target Start/End: Original strand, 39104098 - 39104197
Alignment:
Q  486 taatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatat 585  Q
    |||||||||| | ||||||| |||||||  ||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  39104098 taatatttgatatagttgaccttattacgcatgccaatgcataattttgagcttaaatatattgaataatatattagaaaaaattatgaaaatttgatat 39104197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 1918631 - 1918751
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||||||||||| |  ||||   || ||||||||| |||||||| ||| |||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  1918631 aatactccctccgtctcacaatacaggatacagttgaccttattacacatgccaatgcataattttgaccttaaatatcttgaataatatattagaaaaa 1918730  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  1918731 attatgaaaatttgatatttt 1918751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 486 - 588
Target Start/End: Complemental strand, 30788450 - 30788348
Alignment:
Q  486 taatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatat 585  Q
    ||||| |||||||||||||| |||| ||  ||| |||||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||||||    
T  30788450 taatacttgaaacagttgaccttataacgcatgtcaatgcataattttgagcttaaatatcttgaataatatattaaaaaaaattatgaaaatttgatat 30788351  T
Q  586 ttt 588  Q
    |||    
T  30788350 ttt 30788348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 41042638 - 41042758
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||| ||||||||||||||  ||| |||| ||||   ||||| |||  |||||||||||||||||||||||||||||||||||| | |||||||||    
T  41042638 aatactccatccgtcccttaatacatgacacagctgactccattacgtatttcaatgcataattttgagcttaaatatattgaataatatgttagaaaaa 41042737  T
Q  568 tttatgaaaatttgatatttt 588  Q
     | ||||||||||||||||||    
T  41042738 atcatgaaaatttgatatttt 41042758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 473 - 588
Target Start/End: Original strand, 4152116 - 4152231
Alignment:
Q  473 tccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttat 572  Q
    |||||||||||| |||||| ||| | ||||||| || ||||  ||| ||||||||| |||||||||||||||||||||||||| | ||||||||| ||||    
T  4152116 tccctccgtcccataatatatgacatagttgaccttgttacgaatgtcaatgcatatttttgagcttaaatatattgaataatatgttagaaaaaattat 4152215  T
Q  573 gaaaatttgatatttt 588  Q
    |||||| |||||||||    
T  4152216 gaaaatctgatatttt 4152231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 497 - 588
Target Start/End: Original strand, 14639545 - 14639636
Alignment:
Q  497 acagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||  ||||||| |||| |||||||||| ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  14639545 acagttgatcttattacgtatgtcaatgcataactttgagcttaaatatcttgaataatatattagaaaaaattatgaaaatttgatatttt 14639636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 31190980 - 31191098
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| |||||||||||||| |||||| |    
T  31190980 tactccctccgtcccttaataagtgatacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatgtattggaaaaaat 31191079  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  31191080 tatgaaaatttgatatttt 31191098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 40796875 - 40796993
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||| ||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||| ||||||||  ||||||||| |||||| |||| |    
T  40796875 tactccctctgtcccttaatacttgacacagttgaccttattacgcatgtcaatgcataactttgaacttaaataccttgaataatatattaggaaaaat 40796974  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  40796975 catgaaaatttgatatttt 40796993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 27675803 - 27675683
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||||||||||||||||||||||| || |||||| | |||||||||    
T  27675803 aatactccctccgtcccttaataaatgacacagttgactccattacgcatttcaatgcataattttgagcttaaatatcttaaataatatgttagaaaaa 27675704  T
Q  568 tttatgaaaatttgatatttt 588  Q
     | ||||||||||||||||||    
T  27675703 atcatgaaaatttgatatttt 27675683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 477 - 588
Target Start/End: Original strand, 32110452 - 32110563
Alignment:
Q  477 tccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaa 576  Q
    |||||||  ||||| |||| | |||||||||||||||  ||  |||||||||| ||||||||| ||||| ||||||||| ||||||||||| ||||||||    
T  32110452 tccgtccaataatacttgacagagttgacattattacgcatctcaatgcataactttgagcttcaatatcttgaataatatattagaaaaaattatgaaa 32110551  T
Q  577 atttgatatttt 588  Q
    ||||||||||||    
T  32110552 atttgatatttt 32110563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 1780948 - 1781070
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| |||| |||| |||| |||||| |    
T  1780948 tactccctccgtcccttaataagtgacacagttgacccaattactcataccaatgcgtaattttgagtttaaatatcttgagtaatatattggaaaaaat 1781047  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||||||    
T  1781048 tatgaaaatttgatattttaaaa 1781070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 2806059 - 2805941
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||  ||||| |||| ||||||||| |||||||  ||| ||||| |||| |||||| |||||||| ||||||||  ||||||||||| |    
T  2806059 tactccctccgtcctataatacttgacacagttgactttattacgcatgtcaatgtataactttgagtttaaatatcttgaataaaatattagaaaaaat 2805960  T
Q  570 tatgaaaatttgatatttt 588  Q
    ||||||||||| |||||||    
T  2805959 tatgaaaattttatatttt 2805941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 9936691 - 9936809
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  9936691 tactccctccgtcccttaataagtgacacagttgacccaattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 9936790  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  9936791 tatgaaaatttgatatttt 9936809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 486 - 588
Target Start/End: Complemental strand, 39035805 - 39035703
Alignment:
Q  486 taatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatat 585  Q
    |||||||||| ||||| ||| ||| ||| |||| ||||| |||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||| ||||    
T  39035805 taatatttgacacagtcgaccttactacgtatgtcaatgaataattttgagcttaaatatcttgaataatatattataaaaaattatgaaaatttcatat 39035706  T
Q  586 ttt 588  Q
    |||    
T  39035705 ttt 39035703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 14633270 - 14633150
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||| ||||| |||||||||  ||| ||||||||| | |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||    
T  14633270 aatactctctccgccccttaataagtgacacagttgacctaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaa 14633171  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  14633170 attatgaaaatttgatatttt 14633150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 476 - 588
Target Start/End: Complemental strand, 40080236 - 40080124
Alignment:
Q  476 ctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaa 575  Q
    |||| ||||||||||  ||| |||||||||  ||||||  ||  ||||| |||||||||||||||||||| ||||||||| | ||||||||| |||||||    
T  40080236 ctccatcccttaataaatgacacagttgactctattacgcattccaatgtataattttgagcttaaatatcttgaataatatgttagaaaaaattatgaa 40080137  T
Q  576 aatttgatatttt 588  Q
    |||||||||||||    
T  40080136 aatttgatatttt 40080124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 30721487 - 30721606
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| ||| |||||| |||||||| ||||||||| |||| ||||||     
T  30721487 atactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaaatttgagtttaaatatcttgaataatatattggaaaaaa 30721586  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  30721587 ttatgaaaatttgatatttt 30721606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 2799893 - 2799775
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||| |||  ||||| |||| ||||||||| |||||||  ||| ||||| |||| |||||| |||||||| ||||||||  ||||||||||| |    
T  2799893 tactccctccatcctataatacttgacacagttgactttattacgcatgtcaatgtataactttgagtttaaatatcttgaataaaatattagaaaaaat 2799794  T
Q  570 tatgaaaatttgatatttt 588  Q
    ||||||||||| |||||||    
T  2799793 tatgaaaattttatatttt 2799775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 14607361 - 14607482
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||   ||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  14607361 tactccctccgtcccttaataagtgacacagttgacccaattacgcatactaatgcgtaattttgagtttaaatatcttgaataatatatt-gaaaaaat 14607459  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||||||    
T  14607460 tatgaaaatttgatattttaaaa 14607482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 498 - 588
Target Start/End: Original strand, 40365719 - 40365809
Alignment:
Q  498 cagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||| |||||||  ||| |||||||||| ||||| ||||||||| ||||||||| |||||| |||| ||||||||||||||||||||    
T  40365719 cagttgaccttattacgcatgtcaatgcataactttgaacttaaatattttgaataatatattaggaaaaattatgaaaatttgatatttt 40365809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 10465096 - 10465216
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||| ||||||||||  ||| |||||||||   ||||   ||  |||||||||||||||||||||||||| ||||||||| | |||||||||    
T  10465096 aatactccctccatcccttaatacatgacacagttgactccattatgcatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaaa 10465195  T
Q  568 tttatgaaaatttgatatttt 588  Q
     | ||||||| ||||||||||    
T  10465196 atcatgaaaaattgatatttt 10465216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 34347682 - 34347614
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||| ||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  34347682 caatgcataactttgagcttaagtatcttgaataatatattagaaaaaattatgaaaatttgatatttt 34347614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 508 - 592
Target Start/End: Complemental strand, 39925427 - 39925343
Alignment:
Q  508 tattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||| |||| ||||||||||||||||| |||||||| ||||||||| | || |||||| |||| |||||||||||||||||||    
T  39925427 tattacgtatgtcaatgcataattttgagtttaaatatcttgaataatatgttggaaaaaattataaaaatttgatattttaaaa 39925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 19344501 - 19344620
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||| |||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||  ||||||     
T  19344501 atactccctccgtctcttaataaatgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatattttgaataatatatcggaaaaaa 19344600  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  19344601 ttatgaaaatttgatatttt 19344620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 20040217 - 20040336
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||  |||||||| ||||||||| |||| |||||      
T  20040217 atactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgaatttaaatatcttgaataatatattggaaaaga 20040316  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  20040317 ttatgaaaatttgatatttt 20040336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 14057969 - 14057851
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||| |||||   ||||   ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  14057969 tactccctccgtcccttaataagtgacacaattgacccaattatgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 14057870  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  14057869 tatgaaaatttgatatttt 14057851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 14355760 - 14355642
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||| ||| ||||| ||||| |||| ||| || || |||||||  ||| | ||| |||||||||||||||||||| || |||||| ||||| ||||| |    
T  14355760 tactcgctctgtcccataatacttgacacaattcactttattacgcatgtcgatggataattttgagcttaaatatcttaaataatatattataaaaaat 14355661  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  14355660 tatgaaaatttgatatttt 14355642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 20023121 - 20023003
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||| ||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  20023121 tactccctccgtccctcaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 20023022  T
Q  570 tatgaaaatttgatatttt 588  Q
    ||| |||||||||||||||    
T  20023021 tataaaaatttgatatttt 20023003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 2551480 - 2551548
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||||||||||| |||||||| ||||||||| ||||| ||||| ||||||| ||||||||||||    
T  2551480 caatgcataattttgagtttaaatatcttgaataatatattaaaaaaaattatgaatatttgatatttt 2551548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 14140129 - 14140061
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||||||||||| |||||||| ||||||||| | ||||||||| | ||||||||||||||||||    
T  14140129 caatgcataattttgagtttaaatatcttgaataatatgttagaaaaaatcatgaaaatttgatatttt 14140061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 476 - 588
Target Start/End: Original strand, 32473832 - 32473943
Alignment:
Q  476 ctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaa 575  Q
    ||||||||| ||||| |||| ||| |||   |||||||  |||  ||||||||||||||||| ||||||| ||||||||| ||||| ||||| |||||||    
T  32473832 ctccgtcccataatacttgacacaattgtttttattacgcatgttaatgcataattttgagcgtaaatatcttgaataatatatta-aaaaaattatgaa 32473930  T
Q  576 aatttgatatttt 588  Q
    |||||||||||||    
T  32473931 aatttgatatttt 32473943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 36578797 - 36578729
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||| |||||| | ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  36578797 caatgcacaattttcatcttaaatatcttgaataatctattagaaaaaattatgaaaatttgatatttt 36578729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 497 - 588
Target Start/End: Complemental strand, 967428 - 967337
Alignment:
Q  497 acagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||| |||||||  ||  |||||||||||||||| ||||||||| |||||||||   ||||||||| |||| |||||||||||||||    
T  967428 acagttgactttattacgcataccaatgcataattttgaacttaaatatcttgaataataagttagaaaaaattataaaaatttgatatttt 967337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 473 - 588
Target Start/End: Complemental strand, 34170087 - 34169972
Alignment:
Q  473 tccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttat 572  Q
    ||||||||||||||||||  ||| |||||||||   |||||  ||   |||| |||||||||||||||||||| ||| ||||| | ||||||||| | ||    
T  34170087 tccctccgtcccttaatacatgacacagttgactcaattacgcattctaatgtataattttgagcttaaatattttggataatatgttagaaaaaatcat 34169988  T
Q  573 gaaaatttgatatttt 588  Q
    ||||||||||||||||    
T  34169987 gaaaatttgatatttt 34169972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 30351874 - 30351992
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||| ||||||||||||||  |||   |||||||   ||||| |||  |||||| |||||||||| |||||||| ||||| ||| |||| |||||| |    
T  30351874 tactccatccgtcccttaataagtgacctagttgaccaaattacgtataccaatgcgtaattttgagtttaaatatcttgaacaatatattggaaaaaat 30351973  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  30351974 tatgaaaatttgatatttt 30351992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 41262932 - 41263050
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||| |||||||  ||| ||| |||||   |||||  ||  |||||| ||| |||||| |||||||| ||||||||| |||| |||||| |    
T  41262932 tactccctccgtctcttaataagtgacacaattgacccaattacgcataccaatgcgtaaatttgagtttaaatatcttgaataatatattggaaaaaat 41263031  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  41263032 tatgaaaatttgatatttt 41263050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 41410463 - 41410580
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||| ||| ||||||  ||| |||||||||   ||||| |||  |||||| |||||||||| |||||||| ||||||||| ||||| |||||||    
T  41410463 tactccctccttcctttaataagtgacacagttgacccaattacgtataccaatgcgtaattttgagtttaaatatcttgaataatatattaaaaaaatt 41410562  T
Q  570 tatgaaaatttgatatttt 588  Q
     || |||||||||||||||    
T  41410563 -ataaaaatttgatatttt 41410580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 475 - 588
Target Start/End: Original strand, 20502856 - 20502969
Alignment:
Q  475 cctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatga 574  Q
    |||||||||| |||||  ||| |||||||||  |||||| | || |||||||| ||||||| ||||||||| || | |||| ||||| ||||| |||||     
T  20502856 cctccgtcccataatagatgacacagttgaccctattacgtttgtcaatgcattattttgaacttaaatatgttaagtaatatattaaaaaaaattatgt 20502955  T
Q  575 aaatttgatatttt 588  Q
    ||||||||||||||    
T  20502956 aaatttgatatttt 20502969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 1098386 - 1098318
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  1098386 caatgcgtaattttgagtttaaatatcttgaataatatattgaaaaaaattatgaaaatttgatatttt 1098318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 30211594 - 30211662
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||| |||| |||||||||||||||    
T  30211594 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattataaaaatttgatatttt 30211662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 1831611 - 1831494
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||| ||| ||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||| |||||||    
T  1831611 tactccctccttcctttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattaaaaaaatt 1831512  T
Q  570 tatgaaaatttgatatttt 588  Q
     || |||||||||||||||    
T  1831511 -ataaaaatttgatatttt 1831494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 470 - 587
Target Start/End: Complemental strand, 6735043 - 6734925
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtatt-agaaaaat 568  Q
    ||||||||| ||||  |||||  ||| |||||||||  |||||| ||   ||||| |||||||||||||||||||| ||||||||| |||| | |||||     
T  6735043 tactccctcagtcctataatacatgatacagttgaccctattacgtacatcaatgtataattttgagcttaaatatcttgaataatatattaaaaaaaaa 6734944  T
Q  569 ttatgaaaatttgatattt 587  Q
    |||| ||||||||||||||    
T  6734943 ttatcaaaatttgatattt 6734925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 507 - 588
Target Start/End: Complemental strand, 8627360 - 8627278
Alignment:
Q  507 ttattacatatgacaatgcataatttt-gagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||| ||  |||||||||||||| ||| |||||||| ||||||||| ||||||||||| |||| ||||||| |||||||    
T  8627360 ttattacacatatcaatgcataatttttgagtttaaatatcttgaataatatattagaaaaaattataaaaattttatatttt 8627278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 40317078 - 40316961
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||| ||| ||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||| |||||||    
T  40317078 tactccctccttcctttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattaaaaaaatt 40316979  T
Q  570 tatgaaaatttgatatttt 588  Q
     || |||||||||||||||    
T  40316978 -ataaaaatttgatatttt 40316961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 13548417 - 13548356
Alignment:
Q  527 taattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||| |||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  13548417 taattttgagtttaaatatcttgaataatatattgaaaaaaattatgaaaatttgatatttt 13548356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 592
Target Start/End: Original strand, 39482783 - 39482847
Alignment:
Q  528 aattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||| ||| |||||||||||| |||||| ||||||||||| |||| ||||| |||||||||||||    
T  39482783 aattatgatcttaaatatatttaataatctattagaaaaaattataaaaatctgatattttaaaa 39482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 592
Target Start/End: Original strand, 3050839 - 3050905
Alignment:
Q  526 ataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||||||  |||||||| || | |||| ||||||||||| ||||||||||||||||||| ||||    
T  3050839 ataattttgattttaaatatttttattaatttattagaaaaaattatgaaaatttgatatttgaaaa 3050905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 515 - 592
Target Start/End: Original strand, 41625186 - 41625263
Alignment:
Q  515 tatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||| ||||||| ||||||||  |||||||| || |||||| |||| |||||| |||||||||||| |||||| ||||    
T  41625186 tatgccaatgcacaattttgaatttaaatatctttaataatttattcgaaaaaattatgaaaatttaatatttaaaaa 41625263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 592
Target Start/End: Complemental strand, 6500341 - 6500271
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||| || ||||| ||||||||| |  |||||| ||||||||||||| |||||||||||||||| |||||    
T  6500341 aatgcacaaatttgatcttaaatatttataataatttattagaaaaatt-atgaaaatttgatattataaaa 6500271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 528 - 586
Target Start/End: Complemental strand, 21031837 - 21031779
Alignment:
Q  528 aattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatt 586  Q
    |||||||| ||||||||| || |||||| ||||||||||| |||| |||||||| ||||    
T  21031837 aattttgatcttaaatatctttaataatatattagaaaaaattataaaaatttggtatt 21031779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 588
Target Start/End: Original strand, 34278614 - 34278687
Alignment:
Q  515 tatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| ||||| | |||||| | |||||||||||| |||||| |||| |||||| |||| ||||||| |||||||    
T  34278614 tatgtcaatgtacaattttaaacttaaatatatttaataatctatttgaaaaaattataaaaatttaatatttt 34278687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 7e-35; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 10228526 - 10228645
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||| ||||||||| ||||||||| |||||||||||     
T  10228526 atactccctccgtcccttaatacttgacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattagaaaaaa 10228625  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  10228626 ttatgaaaatttgatatttt 10228645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 44821332 - 44821450
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||| |||||||| |||||| |||| ||| ||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||| ||||||||||| |    
T  44821332 tactctctccgtcctttaatacttgacacaattgaccttattacatatgtcaatgcataactttgagcttaaatatcttgaataatatattagaaaaaat 44821431  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  44821432 tatgaaaatttgatatttt 44821450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 9997677 - 9997796
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||| ||||||||| ||||||||| |||||| ||||     
T  9997677 atactccctccgtcccttaatacttgacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattaggaaaaa 9997776  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  9997777 ttatgaaaatttgatatttt 9997796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 10106181 - 10106300
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||| ||||||||| ||||||||| |||||| ||||     
T  10106181 atactccctccgtcccttaatacttgacacagttgactttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattaggaaaaa 10106280  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  10106281 ttatgaaaatttgatatttt 10106300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 10232282 - 10232401
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||| |||||| |||| ||||||||| |||||||  ||| |||||||||| ||||| ||||||||| ||||||||| |||||| ||||     
T  10232282 atactccctccgtcctttaatacttgacacagttgactttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattaggaaaaa 10232381  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  10232382 ttatgaaaatttgatatttt 10232401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 486 - 588
Target Start/End: Original strand, 1334112 - 1334214
Alignment:
Q  486 taatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatat 585  Q
    |||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||| || |||||| ||||||||||| |||| ||||||||||||    
T  1334112 taatatttgatacagttgaccttattacacatgtcaatgcataattttgagcttaaatatcttaaataatatattagaaaaaattataaaaatttgatat 1334211  T
Q  586 ttt 588  Q
    |||    
T  1334212 ttt 1334214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 483 - 588
Target Start/End: Original strand, 36594229 - 36594335
Alignment:
Q  483 ccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattag-aaaaatttatgaaaatttg 581  Q
    |||||||| |||| ||||||||| |||||||  ||| |||||||||||||||||||||||||| ||||||||| |||||| ||||| |||||||||||||    
T  36594229 ccttaatacttgacacagttgaccttattacgcatgtcaatgcataattttgagcttaaatatcttgaataatatattagaaaaaaattatgaaaatttg 36594328  T
Q  582 atatttt 588  Q
    |||||||    
T  36594329 atatttt 36594335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 469 - 592
Target Start/End: Complemental strand, 49819019 - 49818896
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||   ||||   ||  |||||||||||||||||||||||||| ||||||||| | |||||||||     
T  49819019 atactccctccgtcccttaatacatgacacagttgactccattatgcatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaa 49818920  T
Q  569 ttatgaaaatttgatattttaaaa 592  Q
    | ||||||||||||||||||||||    
T  49818919 tcatgaaaatttgatattttaaaa 49818896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 592
Target Start/End: Complemental strand, 4465142 - 4465020
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||| ||||||| ||| |||||| ||   ||||   ||  |||||||||||||||||||||||||| ||||||||| | ||||||||| |    
T  4465142 tactccctccgtcctttaatatatgacacagttaactccattatgcatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaaagt 4465043  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||||||    
T  4465042 tatgaaaatttgatattttaaaa 4465020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 592
Target Start/End: Complemental strand, 32961507 - 32961385
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||| |||||||| ||||||  || |||||||||  ||||||  ||| ||||||||||||||||| |||||||| ||||||||| | ||||||||| |    
T  32961507 tactccgtccgtcccataatatacgatacagttgaccctattacgcatgtcaatgcataattttgagtttaaatattttgaataatatgttagaaaaaat 32961408  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    ||||||||||| |||||||||||    
T  32961407 tatgaaaatttcatattttaaaa 32961385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 53055423 - 53055541
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||| ||||||||||| | ||||||  |||||||||  |   |||||||||||| ||||||||||| ||||||||| ||||| |||||    
T  53055423 aatactccctccgtcctttaatatttgacagagttgatgttattacat--gctgatgcataattttaagcttaaatatcttgaataatatattaaaaaaa 53055520  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  53055521 attatgaaaatttgatatttt 53055541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 16434653 - 16434773
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||| ||||||||||||  ||| |||||||||   ||||| |||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||    
T  16434653 aatactcccttcgtcccttaataagtgacacagttgacccaattacgtataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaa 16434752  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  16434753 attatgaaaatttgatatttt 16434773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 43394355 - 43394475
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||| || |||||  ||| ||||| |||  ||| ||  ||| ||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  43394355 aatactccctccgttccataatacatgacacagtggaccctatcacgcatgccaatggataattttgagcttaaatatcttgaataatatattagaaaaa 43394454  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  43394455 attatgaaaatttgatatttt 43394475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 2643068 - 2643185
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| | |||||||   |||||  ||| |||||||||||||||||||||||||| ||||||||| | ||| ||||| |    
T  2643068 tactccctccgtcccttaatacatgacatagttgactccattacgcatgccaatgcataattttgagcttaaatatcttgaataatatgtta-aaaaaat 2643166  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  2643167 tatgaaaatttgatatttt 2643185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 33462966 - 33462848
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||| |||||||||| |||||  ||  |||||||||  |||||   ||| |||||||||||||||||||||||||| ||||||||| ||| ||||||| |    
T  33462966 tacttcctccgtcccataatacatgccacagttgaccctattatgcatgccaatgcataattttgagcttaaatatcttgaataatatataagaaaaaat 33462867  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  33462866 tatgaaaatttgatatttt 33462848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 42098425 - 42098543
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  42098425 tactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 42098524  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  42098525 tatgaaaatttgatatttt 42098543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 12948303 - 12948183
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||||||||||| |||||||  ||| ||||||||    |||||  ||  ||||||||||||||||| |||||||| ||||||||| |||| ||||||    
T  12948303 aatactccctccgtctcttaataagtgacacagttgatccaattacgcataccaatgcataattttgagtttaaatatcttgaataatatattggaaaaa 12948204  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  12948203 attatgaaaatttgatatttt 12948183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 34680444 - 34680324
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattag-aaaaa 567  Q
    ||||||||||||||||||||||  ||| |||||||||  |||||| |||  ||||| |||||||||||||||||||| ||||||||  | |||| |||||    
T  34680444 atactccctccgtcccttaatacatgacacagttgactctattacgtattccaatgtataattttgagcttaaatatcttgaataaaatgttagaaaaaa 34680345  T
Q  568 tttatgaaaatttgatatttt 588  Q
     | ||||||||||||||||||    
T  34680344 atcatgaaaatttgatatttt 34680324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 18013319 - 18013386
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  18013319 aatgcataatttagagcttaaatatcttgaataatatattagaaaaaattatgaaaatttgatatttt 18013386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 47070284 - 47070165
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||| ||| |||| |||||||||| ||| ||||  |||||||  ||| ||||| |||| ||| |||||||||||||| |||||| |||| ||||||     
T  47070284 atactccttccatcccataatatttgacacacttgatcttattacgcatgccaatgtataactttcagcttaaatatattaaataatatatttgaaaaaa 47070185  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  47070184 ttatgaaaatttgatatttt 47070165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 900886 - 901004
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||| ||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  900886 tacttcctccgtcccttaataagtgacacagttgaccaaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 900985  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  900986 tatgaaaatttgatatttt 901004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 1778621 - 1778504
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||| ||  ||| |||||||||   ||||| |||  |||||||||||||||||||||||||| || |||||| | ||||||||| |    
T  1778621 tactccctccgtccctta-tacatgacacagttgactccattacgtattccaatgcataattttgagcttaaatatcttaaataatatgttagaaaaaat 1778523  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  1778522 catgaaaatttgatatttt 1778504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 4945649 - 4945767
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||| |||||   || ||  ||  |||||||||||||||||||||||||| ||||||||| | ||||||||| |    
T  4945649 tactccctccgtcccttaatacatgacacaattgactccatcacgcattccaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaat 4945748  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  4945749 catgaaaatttgatatttt 4945767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 29444851 - 29444969
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||| |||||||  ||| |||||||||   |||||||||  |||||| |||||||||  |||||||| ||||||||| ||||  ||||| |    
T  29444851 tactccctccgtctcttaataagtgacacagttgaccaaattacatataccaatgcgtaattttgaatttaaatatcttgaataatatattgaaaaaaat 29444950  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  29444951 tatgaaaatttgatatttt 29444969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 29588636 - 29588518
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||| |||||||| |||||  ||| |||||||||  |||||  |||   ||||||||||||||||||||||||| ||||||||| ||||| || || |    
T  29588636 tactccttccgtcccataatacatgacacagttgactctattatgtatactaatgcataattttgagcttaaatatcttgaataatatattaaaagaaat 29588537  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  29588536 tatgaaaatttgatatttt 29588518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 29720656 - 29720538
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||| ||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  29720656 tactccttccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 29720557  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  29720556 tatgaaaatttgatatttt 29720538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 34263502 - 34263620
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||||||||    |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  34263502 tactccctccgtcccttaataagtgatacagttgatccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 34263601  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  34263602 tatgaaaatttgatatttt 34263620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 515 - 588
Target Start/End: Original strand, 9281306 - 9281379
Alignment:
Q  515 tatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| |||||||||||||||| ||||||||| || |||||| ||||||||||| ||||||||||||||||||||    
T  9281306 tatgtcaatgcataattttgaacttaaatatctttaataatctattagaaaaaattatgaaaatttgatatttt 9281379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 29455504 - 29455624
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  ||| |||||||||    ||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||  |||||    
T  29455504 aatactccctccgtcccttaataagtgacacagttgacccatttacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattgaaaaaa 29455603  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  29455604 attatgaaaatttgatatttt 29455624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 516 - 588
Target Start/End: Original strand, 47339928 - 47340000
Alignment:
Q  516 atgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||| |||||||| ||||||| | ||||||||||| |||||||||||| |||||||    
T  47339928 atgacaatgcataattttgagtttaaatatcttgaatagtatattagaaaaaattatgaaaatttaatatttt 47340000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 4228985 - 4229104
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||| ||||||||||  ||| || ||||||   |||||  ||  ||||||||||||||||| |||||||| ||||||||| | |||||||||     
T  4228985 atactccctccatcccttaatacatgacacggttgactccattacgcattccaatgcataattttgagtttaaatatcttgaataatatgttagaaaaaa 4229084  T
Q  569 ttatgaaaatttgatatttt 588  Q
    |||| |||||||||||||||    
T  4229085 ttataaaaatttgatatttt 4229104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 592
Target Start/End: Complemental strand, 26759740 - 26759617
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||| ||||||  ||| |||||||||  |||||   ||  ||||  ||||||||||| |||||||| ||||||||| | |||||||||     
T  26759740 atactccctccgtcctttaatacatgacacagttgactctattatgcatttcaatatataattttgagtttaaatatcttgaataatatgttagaaaaaa 26759641  T
Q  569 ttatgaaaatttgatattttaaaa 592  Q
    ||||||||||||||||||| ||||    
T  26759640 ttatgaaaatttgatatttgaaaa 26759617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 36178985 - 36179052
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||| |||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  36178985 aatgcgtaattttgagtttaaatatcttgaataatatattagaaaaaattatgaaaatttgatatttt 36179052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 46866605 - 46866486
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| ||| |||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||  |||||     
T  46866605 atactccctccgtcccttaataagtgatacaattgacccaattacgcataccaatgcgtaattttgagtttaaatattttgaataatatattgaaaaaaa 46866506  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  46866505 ttatgaaaatttgatatttt 46866486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 29793176 - 29793294
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||| ||||||||||||  ||| |||||| ||   |||||  ||  ||||||||||||||||| |||||||| || |||||| |||| |||||| |    
T  29793176 tactcccttcgtcccttaataagtgacacagttaacccaattacgcataccaatgcataattttgagtttaaatatcttaaataatatattggaaaaaat 29793275  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  29793276 tatgaaaatttgatatttt 29793294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 29809605 - 29809487
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||| |||||||||||||||  ||| |||||| ||   |||||  ||  |||||||||||||||||||||||||| ||||||||| | ||| ||||| |    
T  29809605 tactctctccgtcccttaatacatgacacagttaactccattacgcattccaatgcataattttgagcttaaatatcttgaataatatgttataaaaaat 29809506  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  29809505 catgaaaatttgatatttt 29809487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 34555412 - 34555294
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||||||| |   ||||   ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  34555412 tactccctccgtcccttaataagtgacacagttggcccaattatgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 34555313  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  34555312 tatgaaaatttgatatttt 34555294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 592
Target Start/End: Complemental strand, 34669869 - 34669747
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||| ||||||  ||| ||||||||    |||| | ||  |||||| |||||||||| |||||||| ||||||||  |||| |||||| |    
T  34669869 tactccctccgtcctttaataagtgacacagttgatccaattatacatatcaatgcgtaattttgagtttaaatatcttgaataacatattggaaaaaat 34669770  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||||||    
T  34669769 tatgaaaatttgatattttaaaa 34669747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 516 - 588
Target Start/End: Complemental strand, 3817938 - 3817866
Alignment:
Q  516 atgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||| |||||||| ||||||| | ||||||||||| |||| ||||||| |||||||    
T  3817938 atgacaatgcataattttgagtttaaatatcttgaatagtatattagaaaaaattataaaaatttaatatttt 3817866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 9484807 - 9484739
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  9484807 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 9484739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 36364611 - 36364679
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||| |||||||||||||||||||| ||||||||| | ||||||||| | ||||||||||||||||||    
T  36364611 caatgtataattttgagcttaaatatcttgaataatatgttagaaaaaatcatgaaaatttgatatttt 36364679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 38878326 - 38878394
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  38878326 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 38878394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 44774262 - 44774342
Alignment:
Q  508 tattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||| ||| ||||||||||||| ||| |||||||  ||||||||| | ||||||||| ||||||||||||||||||||    
T  44774262 tattacacatgtcaatgcataatttagagtttaaatagtttgaataatatgttagaaaaaattatgaaaatttgatatttt 44774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 48927650 - 48927718
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  48927650 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 48927718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 49076274 - 49076342
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  49076274 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 49076342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 50673888 - 50673816
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||  ||||||||||||||||||||||||    
T  50673888 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaagattatgaaaatttgatattttaaaa 50673816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 53274843 - 53274911
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  53274843 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 53274911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 14750858 - 14750976
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||||||||     ||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||  ||||| |    
T  14750858 tactccctccgtcccttaatacatgacacagttgatccagttacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattgaaaaaaat 14750957  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  14750958 tatgaaaatttgatatttt 14750976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 22755905 - 22755831
Alignment:
Q  512 acatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatt 586  Q
    ||||||| |||| || |||||||| ||||||||| ||||| ||| ||||||||||| ||||||||||||||||||    
T  22755905 acatatgtcaatacacaattttgatcttaaatatcttgaacaatctattagaaaaaattatgaaaatttgatatt 22755831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 28958797 - 28958915
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||| ||   |||||  ||   |||||||||||||||| |||||||| ||||||||| | ||||||||| |    
T  28958797 tactccctccgtcccttaatacatgacacagttaactccattacgcattttaatgcataattttgagtttaaatatcttgaataatatgttagaaaaaat 28958896  T
Q  570 tatgaaaatttgatatttt 588  Q
      |||||||||||||||||    
T  28958897 cttgaaaatttgatatttt 28958915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 515 - 592
Target Start/End: Complemental strand, 4016681 - 4016604
Alignment:
Q  515 tatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||| ||||| | |||||| | ||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  4016681 tatgccaatgaacaattttaaacttaaatatctttaataatctattagaaaaaattatgaaaatttgatattttaaaa 4016604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 523 - 592
Target Start/End: Original strand, 23591203 - 23591271
Alignment:
Q  523 tgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||||||||  ||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||||    
T  23591203 tgcataattttgattttaaatatatttaataatttatta-aaaaaattatgaaaatttgatattttaaaa 23591271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 475 - 588
Target Start/End: Original strand, 52093897 - 52094010
Alignment:
Q  475 cctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatga 574  Q
    |||||||||| |||||  ||| || ||||||  ||||||  |||  ||||||||||||||||||||||||| | ||||||| | ||| ||||| |||| |    
T  52093897 cctccgtcccataatacatgacacggttgactctattacgcatgctaatgcataattttgagcttaaatatctcgaataatatgttataaaaaattataa 52093996  T
Q  575 aaatttgatatttt 588  Q
    ||||||||||||||    
T  52093997 aaatttgatatttt 52094010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 12250514 - 12250446
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||| |||| |||||||||||||||    
T  12250514 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattataaaaatttgatatttt 12250446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 43170185 - 43170113
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||||||||||||| ||| |||| ||||||||| | ||| || || ||||||||||||||||||||||||    
T  43170185 caatgcataattttgagtttagatatcttgaataatattttaaaagaaattatgaaaatttgatattttaaaa 43170113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 43399037 - 43398965
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||| |||||||||||| |||||||| || |||||| |||||||||  ||| |||||||||||||||||||||    
T  43399037 caatacataattttgagtttaaatatcttaaataatatattagaaatttttttgaaaatttgatattttaaaa 43398965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 492 - 588
Target Start/End: Complemental strand, 53020067 - 53019971
Alignment:
Q  492 ttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| ||||||||| |||||||  ||| |||||||||| ||||||  ||||||| ||||||||| |||||  |||| |||| |||||||||||||||    
T  53020067 ttgacacagttgaccttattacgcatgtcaatgcataactttgagactaaatatcttgaataatatattatgaaaaattataaaaatttgatatttt 53019971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 501 - 592
Target Start/End: Original strand, 5852488 - 5852579
Alignment:
Q  501 ttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||| ||| || |||| ||||  |||||||||| ||||||||| || |||||| ||||||||||| |||| ||||||||||| |||||||    
T  5852488 ttgacaatatcacgtatgtcaatttataattttgatcttaaatatctttaataatctattagaaaaaattataaaaatttgataatttaaaa 5852579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 521 - 592
Target Start/End: Original strand, 23591469 - 23591539
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||  ||||||||||| |||||| ||||| ||||| |||| |||||||||||||||||||    
T  23591469 aatgcataattttgattttaaatatatttaataatttatta-aaaaaattattaaaatttgatattttaaaa 23591539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 40415135 - 40415061
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataa--tgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||||||||| | ||||||||| || |||||  | ||||||||||| ||||||||||||||||||||||||    
T  40415135 caatgcataattttaaacttaaatatctttaataaaatatattagaaaaaattatgaaaatttgatattttaaaa 40415061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 20144770 - 20144838
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| || | | |||| ||||||||||||||||||||    
T  20144770 caatgcgtaattttgagtttaaatatcttgaataatatagtggcaaaaattatgaaaatttgatatttt 20144838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 38833562 - 38833629
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||| |||||||||| |||||||| ||||||||| ||||  ||||| ||||||||||||| ||||||    
T  38833562 aatgcgtaattttgagtttaaatatcttgaataatatattgaaaaaaattatgaaaatttgttatttt 38833629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 537 - 588
Target Start/End: Complemental strand, 43370485 - 43370434
Alignment:
Q  537 cttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||| |||||||    
T  43370485 cttaaatatcttgaataatatattagaaaaaattatgaaaatttaatatttt 43370434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 467 - 572
Target Start/End: Original strand, 28389067 - 28389172
Alignment:
Q  467 gaatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaa 566  Q
    ||||||||| |  ||||| || ||||||| ||| ||||| | |||||||||| ||||||| || ||| | ||||||||| || |||||| ||||||||||    
T  28389067 gaatactccatttgtcccatattatttgacacaattgacttcattacatatgtcaatgcacaactttaatcttaaatatctttaataatctattagaaaa 28389166  T
Q  567 atttat 572  Q
    | ||||    
T  28389167 aattat 28389172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 520 - 564
Target Start/End: Original strand, 31440480 - 31440524
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaa 564  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||    
T  31440480 caatgcataatttagagcttaaatatcttgaataatatattagaa 31440524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 37166690 - 37166618
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||| |||||||||| ||||||||  || | |||| | ||||||||| |||| |||||||||||||||||||    
T  37166690 caatgaataattttgatcttaaataactttattaatctcttagaaaaaattataaaaatttgatattttaaaa 37166618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 45516895 - 45516962
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| |||||||||| ||||||||| || |||||| |||||||||||  |||||| |||| |||||||    
T  45516895 aatgtataattttgatcttaaatattttaaataatttattagaaaaaaatatgaatatttaatatttt 45516962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 10877195 - 10877142
Alignment:
Q  157 ctggtcaagaattcttccatttaggaattgaactcaggttctcccaaacgattc 210  Q
    |||| |||||||| ||| |  ||||||| |||||||||||||||||||||||||    
T  10877195 ctggccaagaattgttctacataggaatcgaactcaggttctcccaaacgattc 10877142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 588
Target Start/End: Complemental strand, 40732745 - 40732688
Alignment:
Q  531 tttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||| ||||||||| |||||| ||||||||  |||| |||| |||||||||||||||    
T  40732745 tttgatcttaaatattttgaattatgtattaacaaaaattattaaaatttgatatttt 40732688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 592
Target Start/End: Complemental strand, 49220704 - 49220611
Alignment:
Q  499 agttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||| |||||||  |||  |||| ||||||||||| |||||||| ||||||||| ||| | ||| | |||| ||||| |||||||| ||||    
T  49220704 agttgaccttattacgcatgcaaatgtataattttgaggttaaatatcttgaataatatatgataaataattataaaaatatgatatttgaaaa 49220611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 9794386 - 9794314
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||| |||||||| | ||| ||||| || ||| || ||||||||||| | ||||||||| ||||||||||||    
T  9794386 caatgaataatttttatctttaatatcttcaattatctattagaaaaaataatgaaaattcgatattttaaaa 9794314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 39557434 - 39557499
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| ||||||||||  |||||||| || |||||| ||||| ||||  ||||||||||||||||||||    
T  39557434 aatgtataattttgattttaaatatctttaataatatattaaaaaa--ttatgaaaatttgatatttt 39557499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 38036658 - 38036776
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||||||||||||| ||||||||| |||||| |||| |    
T  38036658 tactccctccgtcccttaatacttgacacagttgaccttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattaggaaaaat 38036757  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  38036758 tatgaaaatttgatatttt 38036776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 8496686 - 8496804
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||| |||||||||| |||||  ||| |||||||||  |||||| |||  |||||||||||||||||||||||||| ||||||||| ||||||||||| |    
T  8496686 tacttcctccgtcccataatacatgatacagttgaccctattacgtatatcaatgcataattttgagcttaaatatcttgaataatatattagaaaaaat 8496785  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  8496786 tatgaaaatttgatatttt 8496804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 20671518 - 20671399
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||  |||| |||| ||||||||| |||||||  ||| ||||||||  |||||||||||||||| |||||| || |||||||||||     
T  20671518 atactccctccgtcccacaatacttgacacagttgaccttattacgcatgtcaatgcatggttttgagcttaaatattttgaattatatattagaaaaaa 20671419  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  20671418 ttatgaaaatttgatatttt 20671399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 29917726 - 29917846
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||| ||||||||||||||| |||| ||| | ||| |||||||  |||  | ||||||||||||| ||||||||| ||||||||| |||||||||||    
T  29917726 aatactctctccgtcccttaatacttgacacaatcgaccttattacgcatgcgagtgcataattttgatcttaaatatcttgaataatatattagaaaaa 29917825  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  29917826 attatgaaaatttgatatttt 29917846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 469 - 592
Target Start/End: Complemental strand, 32909317 - 32909194
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||| |||||||||||| |||| ||| ||||  |||||||  ||| |||||||||| ||||||||||||||| ||||||||| |||||| ||||     
T  32909317 atactcccttcgtcccttaatacttgacacaattgattttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattaggaaaaa 32909218  T
Q  569 ttatgaaaatttgatattttaaaa 592  Q
    ||||||||| || |||||||||||    
T  32909217 ttatgaaaaattaatattttaaaa 32909194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 43049068 - 43049187
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||| ||||||||  ||| |||||||||   |||||  ||  |||||||||||||||||||||||||| ||||||||| | |||||||||     
T  43049068 atactccctccgtaccttaataaatgacacagttgactccattacgcatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaa 43049167  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  43049168 ttatgaaaatttgatatttt 43049187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 21132728 - 21132846
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  ||||||||||||||||| |||||||| ||||||||| |||| |||||| |    
T  21132728 tactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcataattttgagtttaaatatcttgaataatatattggaaaaaat 21132827  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  21132828 tatgaaaatttgatatttt 21132846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 471 - 588
Target Start/End: Complemental strand, 37094392 - 37094275
Alignment:
Q  471 actccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaattt 570  Q
    ||||||||||||||||||||  ||| |||||||||   ||||| |||  |||||||||||||||||||||||||| ||||||||| | ||||||||| |     
T  37094392 actccctccgtcccttaataaatgacacagttgactccattacgtatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaatc 37094293  T
Q  571 atgaaaatttgatatttt 588  Q
    ||| ||||||||||||||    
T  37094292 atggaaatttgatatttt 37094275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 44887513 - 44887633
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||||||||||||| |||||  ||| |||||||||  ||||||  ||  |||||||||||||||||| ||||||| ||||||||| ||||| |||||    
T  44887513 aatactccctccgtcccataataaatgacacagttgaccctattacgcataccaatgcataattttgagcataaatatcttgaataatatattataaaaa 44887612  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||| ||||||||||    
T  44887613 attatgaaaaattgatatttt 44887633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 14378486 - 14378605
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||     
T  14378486 atactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaa 14378585  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  14378586 ttatgaaaatttgatatttt 14378605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 27302124 - 27302005
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||||| |||||  ||| ||| |||||  ||||||  ||| ||||||||||||||||| |||||||| ||||||||| ||||| |||||     
T  27302124 atactccctccgtcccataatacatgatacaattgaccctattacgcatgtcaatgcataattttgagtttaaatatcttgaataatatattataaaaaa 27302025  T
Q  569 ttatgaaaatttgatatttt 588  Q
    |||||||||||| |||||||    
T  27302024 ttatgaaaatttaatatttt 27302005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 469 - 584
Target Start/End: Original strand, 29616125 - 29616240
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||||| |||||  ||| ||||||||   ||||||  ||  | |||||||||||||||||||||||| ||||||||| |||||||||||     
T  29616125 atactccctccgtcccataatacatgacacagttgatcctattacgcataccgatgcataattttgagcttaaatatcttgaataatatattagaaaaaa 29616224  T
Q  569 ttatgaaaatttgata 584  Q
    ||||||||||||||||    
T  29616225 ttatgaaaatttgata 29616240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 761811 - 761693
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  761811 tactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 761712  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  761711 tatgaaaatttgatatttt 761693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 11757039 - 11756921
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||||||||||||||||| ||||| ||||||||| | ||||||||| |    
T  11757039 tactccctccgtcccttaatacatgacacagttgactccattacgcattccaatgcataattttgagcttgaatatcttgaataatatgttagaaaaaat 11756940  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  11756939 catgaaaatttgatatttt 11756921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 44362182 - 44362064
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| | |||||||   |||||  ||  |||||||||||||||||||||||||| ||||||||| | ||||||||| |    
T  44362182 tactccctccgtcccttaatacatgacaaagttgactccattacgcattccaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaat 44362083  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  44362082 catgaaaatttgatatttt 44362064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 476 - 588
Target Start/End: Original strand, 1645212 - 1645324
Alignment:
Q  476 ctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaa 575  Q
    ||||||||| ||||| |||| |||  |||| |||||||  ||| |||||||||| ||||||||||||||| |||||||||||||||||||||||    ||    
T  1645212 ctccgtcccataatacttgatacatatgaccttattacgcatgtcaatgcataagtttgagcttaaatatcttgaataatgtattagaaaaattacaaaa 1645311  T
Q  576 aatttgatatttt 588  Q
    |||||||||||||    
T  1645312 aatttgatatttt 1645324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 477 - 588
Target Start/End: Complemental strand, 14512094 - 14511983
Alignment:
Q  477 tccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaa 576  Q
    ||||||| |||||| |||| ||| ||||  ||||||   ||| |||||||||| ||||||||||||||| ||||||||| ||||||||||| |||| |||    
T  14512094 tccgtcctttaatacttgacacaattgatcttattatgcatgtcaatgcataactttgagcttaaatatcttgaataatatattagaaaaaattataaaa 14511995  T
Q  577 atttgatatttt 588  Q
    ||||||||||||    
T  14511994 atttgatatttt 14511983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 473 - 588
Target Start/End: Complemental strand, 23547326 - 23547211
Alignment:
Q  473 tccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttat 572  Q
    ||||||||| ||||||||  ||| ||||||||| | |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||    
T  23547326 tccctccgttccttaataagtgacacagttgacttaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattat 23547227  T
Q  573 gaaaatttgatatttt 588  Q
    ||||||||||||||||    
T  23547226 gaaaatttgatatttt 23547211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 38842424 - 38842306
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||  ||||| |    
T  38842424 tactccctccgtcccttaataagtgatacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattgaaaaaaat 38842325  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  38842324 tatgaaaatttgatatttt 38842306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 468 - 585
Target Start/End: Complemental strand, 67358 - 67241
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||||  ||||||| ||||| |||| | ||||||| |||||||  ||| |||||||||| ||||||||||||||| ||||||||| |||  ||||||    
T  67358 aatactccacccgtcccataatacttgacatagttgaccttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatatatgaaaaa 67259  T
Q  568 tttatgaaaatttgatat 585  Q
     ||||||| |||||||||    
T  67258 attatgaatatttgatat 67241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 515 - 592
Target Start/End: Complemental strand, 23849831 - 23849754
Alignment:
Q  515 tatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||| ||||||||||| |||| ||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  23849831 tatgtcaatgcataatattgaacttaaatatctttaataatttattagaaaaaattatgaaaatttgatattttaaaa 23849754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 475 - 592
Target Start/End: Complemental strand, 44040081 - 44039964
Alignment:
Q  475 cctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatga 574  Q
    ||||| |||| |||||  ||| |||||||||  ||||||  ||  ||||||||||||||||| |||||||| ||||||||| ||||| ||||| ||||||    
T  44040081 cctccatcccataataaatgacacagttgaccctattacgcataccaatgcataattttgagtttaaatatcttgaataatatattataaaaaattatga 44039982  T
Q  575 aaatttgatattttaaaa 592  Q
    ||| ||||||||||||||    
T  44039981 aaaattgatattttaaaa 44039964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 4960413 - 4960294
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||| |||||||||||  | | |||||||||   |||||  ||  |||| ||||||||||||||||||||| ||||||||| | |||||||||     
T  4960413 atactccctctgtcccttaatacataatacagttgactccattacgcattccaatacataattttgagcttaaatatcttgaataatatgttagaaaaaa 4960314  T
Q  569 ttatgaaaatttgatatttt 588  Q
    | ||||||||||||||||||    
T  4960313 tcatgaaaatttgatatttt 4960294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 14583721 - 14583840
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattag-aaaaat 568  Q
    |||||||||||||||||||||  ||| | |||||||  ||||||  ||  |||||||||||||||||||||||||| || |||||| | |||| |||||     
T  14583721 tactccctccgtcccttaatacatgacatagttgactctattacgcattccaatgcataattttgagcttaaatatctttaataatatgttagaaaaaaa 14583820  T
Q  569 ttatgaaaatttgatatttt 588  Q
    | ||||||||||||||||||    
T  14583821 tcatgaaaatttgatatttt 14583840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 576
Target Start/End: Complemental strand, 40645944 - 40645837
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||| |||||| ||||| || | ||| ||||| |||||||  ||| |||||||||| || |||||||||||| ||||||||| |||||||||||     
T  40645944 atactcccttcgtcccataatacttaacacaattgaccttattacgcatgtcaatgcataacttcgagcttaaatatcttgaataatatattagaaaaaa 40645845  T
Q  569 ttatgaaa 576  Q
    ||||||||    
T  40645844 ttatgaaa 40645837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 497 - 588
Target Start/End: Complemental strand, 44717529 - 44717438
Alignment:
Q  497 acagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||  |||||||  ||| |||| |||||||||||||||||||||  |||||||| ||||| ||||| ||||||||||||||||||||    
T  44717529 acagttgatcttattacgcatgtcaattcataattttgagcttaaatatcatgaataatatattataaaaaattatgaaaatttgatatttt 44717438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 11538950 - 11538833
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| | |||||||   |||||| ||  |||||||||||||||||||||||||| ||| || || | ||||||||| |    
T  11538950 tactccctccgtcccttaatacatgacatagttgactccattacacattccaatgcataattttgagcttaaatatcttg-attatatgttagaaaaaat 11538852  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  11538851 catgaaaatttgatatttt 11538833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 23437613 - 23437731
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||||||||    || ||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  23437613 tactccctccgtcccttaataagtgacacagttgattcaatgacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 23437712  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  23437713 tatgaaaatttgatatttt 23437731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 29708822 - 29708704
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  |||   |||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  29708822 tactccctccgtcccttaataagtgacctagttgactcaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 29708723  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  29708722 tatgaaaatttgatatttt 29708704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 30464693 - 30464575
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||  |||||||||| |||||||| ||||||||| ||||  ||||| |    
T  30464693 tactccctccgtcccttaataagtgacacagttgaccaaattacgcatatcaatgtgtaattttgagtttaaatatcttgaataatatattgaaaaaaat 30464594  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  30464593 tatgaaaatttgatatttt 30464575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 498 - 588
Target Start/End: Complemental strand, 44871564 - 44871474
Alignment:
Q  498 cagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||  ||||| | ||| ||||||||||||||||| |||||||| ||||||||| | ||||||||| |||||||||||| |||||||    
T  44871564 cagttgaccctattatacatgtcaatgcataattttgagtttaaatattttgaataatatgttagaaaaaattatgaaaattttatatttt 44871474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 527 - 588
Target Start/End: Original strand, 5777411 - 5777472
Alignment:
Q  527 taattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  5777411 taattttgagtttaaatatcttgaataatatattagaaaaaattatgaaaatttgatatttt 5777472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 475 - 588
Target Start/End: Complemental strand, 25866325 - 25866212
Alignment:
Q  475 cctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatga 574  Q
    ||||||||| ||||||  | | |||||||||   |||||| ||  |||| ||||||||||||||||||||| ||||||||| | ||||||||| | ||||    
T  25866325 cctccgtcctttaatacataatacagttgactccattacacattccaattcataattttgagcttaaatatcttgaataatatgttagaaaaaataatga 25866226  T
Q  575 aaatttgatatttt 588  Q
    ||||||||||||||    
T  25866225 aaatttgatatttt 25866212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 15870386 - 15870318
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  15870386 caatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 15870318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 470 - 585
Target Start/End: Original strand, 28583102 - 28583217
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||    ||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| || ||| |    
T  28583102 tactccctccgtcccttaatacatgacacagttgacccagttacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggagaaaat 28583201  T
Q  570 tatgaaaatttgatat 585  Q
    ||||||||||||||||    
T  28583202 tatgaaaatttgatat 28583217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 42150001 - 42150068
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  42150001 aatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 42150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 564
Target Start/End: Complemental strand, 3466547 - 3466453
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaa 564  Q
    ||||||||| || || ||||| |||| ||||||| | ||||||  |||| |||||||||| ||||||||||||||| ||||||||| ||||||||    
T  3466547 tactccctctgttccataatacttgacacagttggccttattatgtatgtcaatgcataactttgagcttaaatatcttgaataatatattagaa 3466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 25009348 - 25009287
Alignment:
Q  527 taattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  25009348 taattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 25009287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 18419209 - 18419141
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||| ||||||||||| |||||||| ||||||||| | ||||||||| | ||||||||||||||||||    
T  18419209 caatgtataattttgagattaaatatcttgaataatatgttagaaaaaatcatgaaaatttgatatttt 18419141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 30653623 - 30653503
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattaga-aaaa 567  Q
    ||||||| || ||| | |||||| ||| | ||||||| ||||||   ||| |||||||||||||| || |||||||| || |||||| ||||||| ||||    
T  30653623 atactccatctgtctcataatatatgacatagttgaccttattaagcatgtcaatgcataattttcagattaaatatcttaaataatatattagaaaaaa 30653524  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  30653523 cttatgaaaatttgatatttt 30653503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 44020900 - 44020966
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||| |||||| |||||||| ||||||||| |||||||||||  |||||||||||||||||||    
T  44020900 aatgcataactttgagtttaaatatcttgaataatatattagaaaaa-atatgaaaatttgatatttt 44020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 469 - 548
Target Start/End: Complemental strand, 44947267 - 44947188
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatatt 548  Q
    |||||||||||||||| |||||  ||| |||||||||  ||||||  ||  |||||||||||||||||||||||||||||    
T  44947267 atactccctccgtcccataatacatgacacagttgaccatattacgcataccaatgcataattttgagcttaaatatatt 44947188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 486 - 588
Target Start/End: Complemental strand, 8123883 - 8123781
Alignment:
Q  486 taatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatat 585  Q
    ||||| |||| ||| ||||| ||||||   ||| ||||||||||||||||| ||| | || ||||||||| | |||||||||  ||||||||||||||||    
T  8123883 taatacttgacacatttgaccttattatgcatgtcaatgcataattttgagattataaatcttgaataatatgttagaaaaaaatatgaaaatttgatat 8123784  T
Q  586 ttt 588  Q
    |||    
T  8123783 ttt 8123781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 474 - 576
Target Start/End: Complemental strand, 17524060 - 17523958
Alignment:
Q  474 ccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatg 573  Q
    |||||| |||| |||||  ||| ||| ||||  |||||||  ||| |||||||||||||||||||||||||| ||||||||| ||||| ||| | |||||    
T  17524060 ccctccatcccataatacatgacacaattgatcttattacgcatgtcaatgcataattttgagcttaaatatcttgaataatatattaaaaataattatg 17523961  T
Q  574 aaa 576  Q
    |||    
T  17523960 aaa 17523958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 36631994 - 36632111
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||| |||| ||| ||||| || | ||| || ||||| ||||| ||| |||| ||||||||||||  ||||||| ||||||||| ||||| ||||| |    
T  36631994 tactccatccgccccataatactttacacaattaacatttttacacatgtcaatacataattttgagtgtaaatatcttgaataatatatta-aaaaaat 36632092  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||| ||||||||||    
T  36632093 tatgaaaaattgatatttt 36632111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 584
Target Start/End: Original strand, 4326976 - 4327033
Alignment:
Q  527 taattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgata 584  Q
    |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||    
T  4326976 taattttgagtttaaatattttgaataatatattggaaaaaattatgaaaatttgata 4327033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 588
Target Start/End: Original strand, 25691454 - 25691515
Alignment:
Q  527 taattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||| |||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  25691454 taattttgagtttaaatatcttgaataatatattgaaaaaaattatgaaaatttgatatttt 25691515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 40035498 - 40035426
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||| ||||||||| ||||||||||| ||||||||| | |||  |||| |||||||||||| |||||||||||    
T  40035498 caatacataattttcagcttaaatatcttgaataatatgttattaaaaattatgaaaatttcatattttaaaa 40035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 592
Target Start/End: Original strand, 32061157 - 32061223
Alignment:
Q  526 ataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||| ||||| ||||||||| || |||||| ||||||||||| ||||||||| ||||||| ||||||    
T  32061157 ataactttgatcttaaatatttttaataatttattagaaaaaattatgaaaaattgatatgttaaaa 32061223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 516 - 592
Target Start/End: Complemental strand, 14400983 - 14400906
Alignment:
Q  516 atgacaatgcataattttgagcttaaatatattgaataatgtattaga-aaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||| | ||||||| || |||| | ||||||| |||| | |||||||||| |||||||||||    
T  14400983 atgacaatgcataattttgatcctaaatatctttaatagtctattagaaaaaaatcatgaaaattttatattttaaaa 14400906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 592
Target Start/End: Complemental strand, 1226706 - 1226643
Alignment:
Q  528 aattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||| ||||||||| || |||||| || |||||||||| |||||||||| |||||||||||    
T  1226706 aattttgaacttaaatatctttaataatctaatagaaaaatt-atgaaaatttaatattttaaaa 1226643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 551
Target Start/End: Original strand, 8058404 - 8058486
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaa 551  Q
    ||||||||| |||||| ||||| |||| |||||| || |||||||  ||| |||| |||||||||||  |||||||| |||||    
T  8058404 atactcccttcgtcccataatacttgacacagttaaccttattacgcatgccaatacataattttgaatttaaatattttgaa 8058486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 34195123 - 34195189
Alignment:
Q  144 aggtaaataaatcctggtcaagaattcttccatttaggaattgaactcaggttctcccaaacgattc 210  Q
    |||||| |||| ||||| ||| |||| ||||   |||||||||||||| ||||||||||||||||||    
T  34195123 aggtaagtaaagcctggccaaaaattgttcctagtaggaattgaactcgggttctcccaaacgattc 34195189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 13888480 - 13888548
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||| |||||||| ||||||||  || | |||| ||||||||||| |||| | |||||||||||||    
T  13888480 caatgcacaattttgatcttaaataactttactaatctattagaaaaaattataataatttgatatttt 13888548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 16345388 - 16345320
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||| |||||||| ||||||||  || | |||| |||||||||||  ||| |||||||||||||||    
T  16345388 caatgcacaattttgatcttaaataattttactaatctattagaaaaaactataaaaatttgatatttt 16345320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 5e-33; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 1615802 - 1615682
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||| ||||||||||||||||||| ||| || || |||||||  ||| |||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  1615802 aatactccttccgtcccttaatatttgacacaattaaccttattacgcatgtcaatgcataactttgagcttaaatatcttgaataatatattagaaaaa 1615703  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  1615702 attatgaaaatttgatatttt 1615682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 468 - 587
Target Start/End: Original strand, 2805971 - 2806090
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||  ||| |||||||||| ||||| ||||||||| ||||||||| |||||| ||||    
T  2805971 aatactccctccgtcccttaatacttgacacagttgaccttattacgcatgtcaatgcataactttgaacttaaatatcttgaataatatattaggaaaa 2806070  T
Q  568 tttatgaaaatttgatattt 587  Q
     |||||||||||||||||||    
T  2806071 attatgaaaatttgatattt 2806090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 17492928 - 17492810
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||| ||||||| |||| |||||| || |||||||| ||  |||||||||| ||||||||||||||| ||||||||| ||||||||||| |    
T  17492928 tactccctccgtctcttaatacttgacacagttaaccttattacacatatcaatgcataactttgagcttaaatatcttgaataatatattagaaaaaat 17492829  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  17492828 tatgaaaatttgatatttt 17492810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 24505774 - 24505654
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||||||||||||||||||| |||| | ||||||| |||||||  ||| |||| ||||| ||||||||||||||| ||||||||| |||||| ||||    
T  24505774 aatactccctccgtcccttaatacttgacatagttgaccttattacgcatgtcaatacataactttgagcttaaatatcttgaataatatattaggaaaa 24505675  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  24505674 attatgaaaatttgatatttt 24505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 473 - 592
Target Start/End: Complemental strand, 11260960 - 11260841
Alignment:
Q  473 tccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttat 572  Q
    ||||||||||||||||||||||| ||| ||||  |||||||  ||| ||||||||||||||| |||||||||| ||||||||| |||||  |||| ||||    
T  11260960 tccctccgtcccttaatatttgacacaattgatcttattacgcatgtcaatgcataattttgtgcttaaatatcttgaataatatattaagaaaaattat 11260861  T
Q  573 gaaaatttgatattttaaaa 592  Q
    ||||||||||||||||||||    
T  11260860 gaaaatttgatattttaaaa 11260841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 47833945 - 47834064
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||| ||| ||||||| |||| ||||||||| |||||||  ||| |||||||||||||||||||||||||| ||||||||| ||||| |||||     
T  47833945 atactccctctgtctcttaatacttgacacagttgactttattacgcatgtcaatgcataattttgagcttaaatatcttgaataatatattataaaaaa 47834044  T
Q  569 ttatgaaaatttgatatttt 588  Q
    |||||||||||| |||||||    
T  47834045 ttatgaaaattttatatttt 47834064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 470 - 585
Target Start/End: Complemental strand, 51716792 - 51716677
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||||||| | ||||||  ||||||   ||| |||||||||||||||||||||||||| ||||||||| ||||| ||||| |    
T  51716792 tactccctccgtcccttaatatttgacatagttgagcttattatgcatgtcaatgcataattttgagcttaaatattttgaataatatattataaaaaat 51716693  T
Q  570 tatgaaaatttgatat 585  Q
    ||||||||||||||||    
T  51716692 tatgaaaatttgatat 51716677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 4271814 - 4271934
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||||||||||||| ||||| |||| ||||||||| |||||||  ||| |||||||||| ||||||||||||||| |||||| || ||| | |||||    
T  4271814 aatactccctccgtcccataatacttgacacagttgaccttattacgcatgccaatgcataactttgagcttaaatatcttgaattatatatcataaaaa 4271913  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  4271914 attatgaaaatttgatatttt 4271934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 469 - 592
Target Start/End: Original strand, 28988195 - 28988318
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||||||||||||||||||||||| ||||||||| | |||||||||     
T  28988195 atactccctccgtcccttaatacatgacacagttgactccattacgcattccaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaa 28988294  T
Q  569 ttatgaaaatttgatattttaaaa 592  Q
    |||||||| |||||||||||||||    
T  28988295 ttatgaaattttgatattttaaaa 28988318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 29821311 - 29821193
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||| ||||||||| |||||  ||| |||||||||  ||||||  ||  |||||||||||||||||||||||||| ||||||||| ||||||||||| |    
T  29821311 tactctctccgtcccataatacatgacacagttgaccctattacgcataccaatgcataattttgagcttaaatatcttgaataatatattagaaaaaat 29821212  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  29821211 tatgaaaatttgatatttt 29821193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 6520696 - 6520578
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||| ||||||||||||||||  ||| | |||||||   ||||| |||  |||||||||||||||||||||||||| ||||||||| ||||||||||| |    
T  6520696 tacttcctccgtcccttaataaatgacaaagttgactcaattacgtatttcaatgcataattttgagcttaaatatcttgaataatatattagaaaaaat 6520597  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  6520596 catgaaaatttgatatttt 6520578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 28898873 - 28898991
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||| ||| |||||||||   ||||   ||  |||||||||||||||||||||||||| ||||||||| | ||||||||| |    
T  28898873 tactccctccgtcccttaatatatgatacagttgactccattatgcattccaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaat 28898972  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  28898973 catgaaaatttgatatttt 28898991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 467 - 588
Target Start/End: Original strand, 48079847 - 48079968
Alignment:
Q  467 gaatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaa 566  Q
    |||||||||||||||||||||| | |||| ||| ||||  |||||||  ||| ||||| |||| ||||||||||||||| || |||||| |||||| |||    
T  48079847 gaatactccctccgtcccttaaaacttgacacatttgatcttattacgcatgtcaatgtataactttgagcttaaatatcttcaataatatattaggaaa 48079946  T
Q  567 atttatgaaaatttgatatttt 588  Q
    | ||||||||||||||||||||    
T  48079947 aattatgaaaatttgatatttt 48079968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 476 - 588
Target Start/End: Complemental strand, 39260607 - 39260495
Alignment:
Q  476 ctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaa 575  Q
    ||||||||||||||| |||| ||| ||||  |||||||  ||| ||||||||||||||||  |||||||| ||||||||| ||||||||||| |||| ||    
T  39260607 ctccgtcccttaatacttgacacaattgatcttattacgcatgtcaatgcataattttgaatttaaatatcttgaataatatattagaaaaaattataaa 39260508  T
Q  576 aatttgatatttt 588  Q
    |||||||||||||    
T  39260507 aatttgatatttt 39260495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 48381019 - 48380899
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||    
T  48381019 aatactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaa 48380920  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  48380919 attatgaaaatttgatatttt 48380899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 55631675 - 55631795
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||| ||||||||||||  ||| |||||||||   ||||| |||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||    
T  55631675 aatactcccttcgtcccttaataagtgacacagttgacccaattacgtataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaa 55631774  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  55631775 attatgaaaatttgatatttt 55631795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 39171220 - 39171101
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| ||||||||| | |||||  ||  |||||| | |||||||| |||||||| ||||||||| |||| ||||||     
T  39171220 atactccctccgtcccttaataagtgatacagttgacctaattacgcataccaatgcgtgattttgagtttaaatatcttgaataatatattggaaaaaa 39171121  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  39171120 ttatgaaaatttgatatttt 39171101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 39376669 - 39376788
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||||| ||||||||||||||||| ||||||||| | |||||||||     
T  39376669 atactccctccgtcccttaatacatgatacagttgactccattacgcatttcaatgcatgattttgagcttaaatatcttgaataatatgttagaaaaaa 39376768  T
Q  569 ttatgaaaatttgatatttt 588  Q
    | ||||||||||||||||||    
T  39376769 tcatgaaaatttgatatttt 39376788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 592
Target Start/End: Complemental strand, 1378069 - 1377947
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||| ||||||||||  ||| |||||||||   |||||  ||  |||||||||||||||||||||||||| ||||||||| | |||||||||      
T  1378069 tactccctccatcccttaatacatgacacagttgactccattacgcattccaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaac 1377970  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
     ||||||||||||||||||||||    
T  1377969 catgaaaatttgatattttaaaa 1377947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 44210410 - 44210292
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| || ||||||   |||||  ||  |||||||||||||||||||||||||| ||||||||| | ||||||||| |    
T  44210410 tactccctccgtcccttaatacatgatacggttgactccattacgcatttcaatgcataattttgagcttaaatatcttgaataatatgttagaaaaaat 44210311  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  44210310 catgaaaatttgatatttt 44210292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 37164279 - 37164159
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattag-aaaaa 567  Q
    ||||| |||||||||| |||||  ||| |||||||||  ||||||  ||  |||||||||||||||||||||||||| ||||||||| || ||| |||||    
T  37164279 atacttcctccgtcccataatacatgacacagttgaccctattacgcataccaatgcataattttgagcttaaatatcttgaataatataatagaaaaaa 37164180  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  37164179 attatgaaaatttgatatttt 37164159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 8525217 - 8525336
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||| ||||  ||| || ||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||||||||||     
T  8525217 atactccctccgtccctgaataagtgacacggttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattagaaaaaa 8525316  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  8525317 ttatgaaaatttgatatttt 8525336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 28914630 - 28914511
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||| ||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||     
T  28914630 atactccatccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaa 28914531  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  28914530 ttatgaaaatttgatatttt 28914511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 31152923 - 31152804
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||  |||||||||| |||||||||||||||||| ||||  |||||     
T  31152923 atactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgtgtaattttgagtttaaatatattgaataatatattgaaaaaaa 31152824  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  31152823 ttatgaaaatttgatatttt 31152804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 37588332 - 37588455
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattag-aaaaat 568  Q
    |||||| |||||||| ||||| |||| ||||||||  ||||| |  ||| |||||||||||||||||||||||||| || |||||| |||||| |||||     
T  37588332 tactccttccgtcccataatacttgacacagttgatcttattgcgcatgccaatgcataattttgagcttaaatatctttaataatatattagaaaaaaa 37588431  T
Q  569 ttatgaaaatttgatattttaaaa 592  Q
     ||| |||||||||||||||||||    
T  37588432 atataaaaatttgatattttaaaa 37588455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 40411409 - 40411528
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| |||||||||    ||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||     
T  40411409 atactccctccgtcccttaataagtgatacagttgacccatttacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaa 40411508  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  40411509 ttatgaaaatttgatatttt 40411528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 50685182 - 50685063
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||| |||||||| ||||| |||| |||||||||  ||||||  ||  ||||| |||||||||| ||||||||| ||||||||| |||||||||||     
T  50685182 atactccatccgtcccataatacttgacacagttgaccctattacgcataccaatgtataattttgaacttaaatattttgaataatatattagaaaaaa 50685083  T
Q  569 ttatgaaaatttgatatttt 588  Q
     ||||||||||| |||||||    
T  50685082 atatgaaaatttaatatttt 50685063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 3708514 - 3708396
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||| ||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  3708514 tactccctccgtcccttaataagtgacacagttaacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 3708415  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  3708414 tatgaaaatttgatatttt 3708396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 486 - 592
Target Start/End: Complemental strand, 29424891 - 29424785
Alignment:
Q  486 taatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatat 585  Q
    |||||| ||| |||||||||  ||||| |||||  |||| ||||||||||||||||| ||  |||||||| ||||||||||| |||||||||||| ||||    
T  29424891 taatatatgacacagttgaccatattatatatgttaatgtataattttgagcttaaacattctgaataatatattagaaaaaattatgaaaatttaatat 29424792  T
Q  586 tttaaaa 592  Q
    |||||||    
T  29424791 tttaaaa 29424785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 43447426 - 43447308
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||    ||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  43447426 tactccctccgtcccttaataagtgacacagttgacccatttacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 43447327  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  43447326 tatgaaaatttgatatttt 43447308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 51306036 - 51306154
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||| |||||||||||  ||| |||||||||   |||||  ||  ||||||||||||||||| |||||||| ||||||||| | ||||||||| |    
T  51306036 tactccctctgtcccttaataaatgacacagttgactccattacgcatttcaatgcataattttgagtttaaatatcttgaataatatgttagaaaaaat 51306135  T
Q  570 tatgaaaatttgatatttt 588  Q
     ||||||||||||||||||    
T  51306136 catgaaaatttgatatttt 51306154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 522 - 588
Target Start/End: Original strand, 52818544 - 52818610
Alignment:
Q  522 atgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||||||    
T  52818544 atgcataattttgagcttaaatatcttgaataatatattagaaaaaattatgaaaatttaatatttt 52818610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 10385111 - 10384991
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  |||   |||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||    
T  10385111 aatactccctccgtcccttaataagtgacctagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaa 10385012  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  10385011 attatgaaaatttgatatttt 10384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 48652735 - 48652615
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||  |||||||||| |||||||| ||||||||| ||||  |||||    
T  48652735 aatactccctccgtcccttaataagtgacacagttgacccaattacggataccaatgtgtaattttgagtttaaatatcttgaataatatattgaaaaaa 48652636  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  48652635 attatgaaaatttgatatttt 48652615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 46608475 - 46608356
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataa-tgtattagaaaaat 568  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| |||||||| | |||| ||||||     
T  46608475 tactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataagtatattggaaaaaa 46608376  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  46608375 ttatgaaaatttgatatttt 46608356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 587
Target Start/End: Original strand, 1981186 - 1981300
Alignment:
Q  473 tccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttat 572  Q
    |||||||||||| |||||  ||| | |||||||  | ||||  ||| ||||||||||||||||| |||||||| ||||||||| | ||||||| | ||||    
T  1981186 tccctccgtcccataatacatgataaagttgaccctcttacgcatgtcaatgcataattttgagtttaaatatcttgaataatatgttagaaataattat 1981285  T
Q  573 gaaaatttgatattt 587  Q
    |||||||||||||||    
T  1981286 gaaaatttgatattt 1981300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 23605704 - 23605822
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||| ||||||  ||| |||||||||   |||||  ||  |||||||||||||||| ||||||||| ||||||||| | ||||||||| |    
T  23605704 tactccctccgtcctttaatacatgacacagttgactccattacgcattccaatgcataattttgaacttaaatatcttgaataatatgttagaaaaaat 23605803  T
Q  570 tatgaaaatttgatatttt 588  Q
     |||||||||| |||||||    
T  23605804 aatgaaaatttaatatttt 23605822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 39332632 - 39332750
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||| |||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||  ||||| |    
T  39332632 tactccccccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattgaaaaaaat 39332731  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  39332732 tatgaaaatttgatatttt 39332750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 24334230 - 24334298
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||| |||| ||||||||| | ||||||||| | ||||||||||||||||||    
T  24334230 caatgcataattttgagcttacatatcttgaataatatgttagaaaaaatcatgaaaatttgatatttt 24334298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 28909680 - 28909760
Alignment:
Q  508 tattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||| ||||| |||||||||||||||||||| ||||||||| | ||||||||| | |||||||| |||||||||    
T  28909680 tattacgtatgccaatgtataattttgagcttaaatattttgaataatatgttagaaaaaatcatgaaaatatgatatttt 28909760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 37667574 - 37667694
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||| ||| ||||||  ||| |||||| ||   |||||  ||| ||||||  ||||||||| |||||||| ||||||||| |||| ||||||    
T  37667574 aatactccctccatcctttaataagtgacacagttaacccaattacgcatgccaatgcgcaattttgagtttaaatatcttgaataatatattggaaaaa 37667673  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  37667674 attatgaaaatttgatatttt 37667694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 472 - 580
Target Start/End: Complemental strand, 42185533 - 42185425
Alignment:
Q  472 ctccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaattta 571  Q
    ||||||||||||| |||||  ||| |||||||||  |||||| |||   ||||||||||||||||||||||||| || |||||| | ||| ||||| |||    
T  42185533 ctccctccgtcccataatacatgatacagttgaccatattacctattcaaatgcataattttgagcttaaatatcttaaataatatgttataaaaaatta 42185434  T
Q  572 tgaaaattt 580  Q
    |||||||||    
T  42185433 tgaaaattt 42185425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 1613070 - 1613138
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| |||||||||||| |||||||| ||||||||| ||||||||||| | || |||||||||||||||    
T  1613070 caatacataattttgagtttaaatatcttgaataatatattagaaaaaataataaaaatttgatatttt 1613138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 31657209 - 31657276
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||||| | ||||||| ||||||||||    
T  31657209 caatgcataattttgagcttaaatatcttgaataatatgttagaaaaaatcatgaaaa-ttgatatttt 31657276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 498 - 588
Target Start/End: Complemental strand, 30387064 - 30386974
Alignment:
Q  498 cagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||||| ||| |||| ||  |||| |||||||| |||||| ||||| ||||||||| ||||| ||||| ||||||||||||| ||||||    
T  30387064 cagttgaccttactacacatatcaatacataatttcgagctttaatatcttgaataatatattataaaaaattatgaaaatttggtatttt 30386974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 522 - 588
Target Start/End: Complemental strand, 43047596 - 43047530
Alignment:
Q  522 atgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| |||||||||| |||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  43047596 atgcgtaattttgagtttaaatatcttgaataatatattgaaaaaaattatgaaaatttgatatttt 43047530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 592
Target Start/End: Complemental strand, 20651626 - 20651549
Alignment:
Q  515 tatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||| ||||||| |||||||| ||||||||| || |||||| ||| ||||||| |||| ||||||| |||||||||||    
T  20651626 tatgtcaatgcacaattttgaacttaaatatttttaataatctatcagaaaaaattataaaaatttaatattttaaaa 20651549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 520 - 592
Target Start/End: Complemental strand, 45064478 - 45064406
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||| |||||| | ||||||||| || |||||| || || ||||| ||||||||||||||||||||||||    
T  45064478 caatgcacaattttaaacttaaatatctttaataatctaataaaaaaaattatgaaaatttgatattttaaaa 45064406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 480 - 588
Target Start/End: Original strand, 54802870 - 54802978
Alignment:
Q  480 gtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatt 579  Q
    ||||| ||||| |||| | ||||||| |||||||  |||  |||||||||||||||| ||||||||  | |||||  ||||||||||| |||| || |||    
T  54802870 gtcccataatacttgatagagttgaccttattacgcatgttaatgcataattttgaggttaaatatcgtaaataacatattagaaaaaattattaatatt 54802969  T
Q  580 tgatatttt 588  Q
    |||||||||    
T  54802970 tgatatttt 54802978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 468 - 587
Target Start/End: Original strand, 30733734 - 30733854
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatg-tattagaaaa 566  Q
    |||||||||||||||||||| ||| |||   |||||||  ||  || ||||  |||||| |||||||   |||||||| || ||||||  ||||||||||    
T  30733734 aatactccctccgtcccttattatgtgacctagttgactataacacgtatgttaatgcacaattttgtaattaaatatctttaataatcatattagaaaa 30733833  T
Q  567 atttatgaaaatttgatattt 587  Q
    | |||||||||||||||||||    
T  30733834 aattatgaaaatttgatattt 30733854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 42862146 - 42862213
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||| |||||||| |  |||||||| || |||||| ||||||||||| |||||||||||| |||||||    
T  42862146 aatggataattttaaatttaaatatctttaataatatattagaaaaaattatgaaaattttatatttt 42862213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 528 - 592
Target Start/End: Complemental strand, 27982751 - 27982687
Alignment:
Q  528 aattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    |||||||  ||||||||| || | |||| ||||||||||| |||| ||||||| |||||||||||    
T  27982751 aattttggtcttaaatatctttactaatctattagaaaaaattataaaaatttaatattttaaaa 27982687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 468 - 588
Target Start/End: Original strand, 46 - 166
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||  ||| ||||| |||| |||||| |||||||| ||||||||| |||||| ||||    
T  46 aatactccctccgtcccttaatacttgacacagttgaccttattacgcatgccaatgtataactttgagattaaatatcttgaataatatattaggaaaa 145  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  146 attatgaaaatttgatatttt 166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 476 - 588
Target Start/End: Original strand, 19544 - 19656
Alignment:
Q  476 ctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaa 575  Q
    |||||||| |||||| |||| ||||||||| |||||||  ||| |||||||||||||||||||||||||| ||||||||| |||||| |||| |||||||    
T  19544 ctccgtccattaatacttgacacagttgaccttattacgaatgtcaatgcataattttgagcttaaatatcttgaataatatattaggaaaaattatgaa 19643  T
Q  576 aatttgatatttt 588  Q
    |||||||||||||    
T  19644 aatttgatatttt 19656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 463 - 592
Target Start/End: Original strand, 6142307 - 6142436
Alignment:
Q  463 agttgaatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattag 562  Q
    |||| |||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |    
T  6142307 agttaaatactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattgg 6142406  T
Q  563 aaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||| ||||||||||||||||||||||||    
T  6142407 aaaaaattatgaaaatttgatattttaaaa 6142436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 480 - 588
Target Start/End: Original strand, 31948460 - 31948567
Alignment:
Q  480 gtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatt 579  Q
    ||||||||||| |||| ||| ||||| |||||||  ||| |||||||||||| ||||||||| ||| ||||||||| ||||||||||| |||||||||||    
T  31948460 gtcccttaatacttgacacaattgaccttattacgcatgtcaatgcataattctgagcttaa-tatcttgaataatatattagaaaaaattatgaaaatt 31948558  T
Q  580 tgatatttt 588  Q
    |||||||||    
T  31948559 tgatatttt 31948567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 35117538 - 35117419
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    |||||||||||||| |||||||  ||| |||||||||   |||||  ||   ||||||||||||||||||||||||| ||| ||||| |||||||||||     
T  35117538 atactccctccgtcacttaatacatgacacagttgacccaattacgcatactaatgcataattttgagcttaaatatcttggataatatattagaaaaaa 35117439  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  35117438 ttatgaaaatttgatatttt 35117419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 592
Target Start/End: Complemental strand, 995824 - 995702
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||  |||||||||| |||||||| ||||||||| |||| |||||| |    
T  995824 tactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgagtaattttgagtttaaatatcttgaataatatattggaaaaaat 995725  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    |||||||||||||||||||||||    
T  995724 tatgaaaatttgatattttaaaa 995702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 2141829 - 2141711
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||||||||| |||||||  ||| |||||||||   ||||| |||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  2141829 tactccctccgtctcttaataaatgacacagttgacccaattacgtataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 2141730  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  2141729 tatgaaaatttgatatttt 2141711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 2667132 - 2667250
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| ||||||||| | |||||  ||  |||||| |||||||||| |||||||| ||||||||| ||||  ||||| |    
T  2667132 tactccctccgtcccttaataagtgacacagttgacctaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattgaaaaaaat 2667231  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  2667232 tatgaaaatttgatatttt 2667250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 480 - 588
Target Start/End: Original strand, 4889943 - 4890051
Alignment:
Q  480 gtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatt 579  Q
    ||||| ||||| |||| || |||||  |||||||  ||| |||||||||||||||||||||||||| ||||||||| || | |||||| |||||||||||    
T  4889943 gtcccataatacttgacacggttgatcttattacgcatgtcaatgcataattttgagcttaaatatcttgaataatatactcgaaaaaattatgaaaatt 4890042  T
Q  580 tgatatttt 588  Q
    |||||||||    
T  4890043 tgatatttt 4890051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 477 - 588
Target Start/End: Complemental strand, 10106065 - 10105954
Alignment:
Q  477 tccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaa 576  Q
    |||||||| |||||  ||| |||||||||  |||||| |||  ||||||||||||||||| || ||||| ||||||||| || |||||||| ||||||||    
T  10106065 tccgtcccataatacatgacacagttgaccatattacgtatatcaatgcataattttgagatttaatatcttgaataatatactagaaaaaattatgaaa 10105966  T
Q  577 atttgatatttt 588  Q
    ||||||||||||    
T  10105965 atttgatatttt 10105954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 521 - 588
Target Start/End: Original strand, 10109269 - 10109336
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  10109269 aatgcataactttgagcttaaatatcttgaataatatattagaaaaaattatgaaaatttgatatttt 10109336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 470 - 592
Target Start/End: Original strand, 16661408 - 16661531
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtatta-gaaaaat 568  Q
    ||||||||| ||||  ||||| || | ||||||||| ||||||| |||| |||| ||||| ||||||||||||||| ||||||||| |||||  |||||     
T  16661408 tactccctctgtcctataatactttacacagttgaccttattacgtatgtcaatacataactttgagcttaaatatcttgaataatatattataaaaaaa 16661507  T
Q  569 ttatgaaaatttgatattttaaaa 592  Q
     |||||||||||||||||||||||    
T  16661508 atatgaaaatttgatattttaaaa 16661531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 17496134 - 17496253
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||| ||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||     
T  17496134 atactccctccatcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaa 17496233  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  17496234 ttatgaaaatttgatatttt 17496253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 588
Target Start/End: Complemental strand, 31709154 - 31709036
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||| | |||||| ||||| |||| | ||||||  ||||||   ||| |||||||||| ||||||||||||||| ||||||||| |||||||||||     
T  31709154 atactccattcgtcccataatacttgacatagttgatcttattatgcatgccaatgcataactttgagcttaaatattttgaataatatattagaaaaa- 31709056  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  31709055 ttatgaaaatttgatatttt 31709036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 2398031 - 2397913
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| ||||||| || |||||||| ||||||||| |||| |||||| |    
T  2398031 tactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttaagtttaaatatcttgaataatatattggaaaaaat 2397932  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  2397931 tatgaaaatttgatatttt 2397913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 32674009 - 32673891
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||| ||  ||| | |||||||||| |||||| || ||||||||| | ||||||||| |    
T  32674009 tactccctccgtcccttaatacatgatacagttgactccattacacattccaacgtataattttgaccttaaacatcttgaataatatgttagaaaaaat 32673910  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  32673909 tatgaaaatttgatatttt 32673891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 12677243 - 12677122
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattaga-aaa 566  Q
    |||||||  |||||| | |||||| ||| | ||||||| |||||||| ||  ||||||||||||||||| |||||||| ||||||||| ||||||| |||    
T  12677243 aatactcattccgtctcgtaatatatgacatagttgactttattacacatatcaatgcataattttgagtttaaatattttgaataatatattagaaaaa 12677144  T
Q  567 atttatgaaaatttgatatttt 588  Q
    | || |||||||||||||||||    
T  12677143 aattgtgaaaatttgatatttt 12677122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 26210966 - 26210890
Alignment:
Q  512 acatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    ||||||| |||| ||||||||||| ||||||||| || |||||| ||||||||||| ||||||||||||||||||||    
T  26210966 acatatgccaatacataattttgaacttaaatatctttaataatatattagaaaaaattatgaaaatttgatatttt 26210890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 588
Target Start/End: Original strand, 29514833 - 29514951
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaat 568  Q
    ||||||||||||||||||||||  ||| ||| |||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||     
T  29514833 atactccctccgtcccttaataagtgacacaattgacccaattacgcatatcaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaa- 29514931  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  29514932 ttatgaaaatttgatatttt 29514951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 521 - 592
Target Start/End: Original strand, 32541335 - 32541406
Alignment:
Q  521 aatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||| |||||||||| |||||||| ||||||||| |||| |||||| ||||||||||||||||||||||||    
T  32541335 aatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatattttaaaa 32541406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 2913158 - 2913040
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  |||   |||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  2913158 tactccctccgtcccttaataagtgacctagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 2913059  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  2913058 tatgaaaatttgatatttt 2913040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 24825426 - 24825308
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  |||  ||||||||   |||||  ||  |||||  |||||||||| |||||||| ||||||||| |||| |||||| |    
T  24825426 tactccctccgtcccttaataagtgatccagttgactcaattacgcatatcaatgtgtaattttgagtttaaatatcttgaataatatattggaaaaaat 24825327  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  24825326 tatgaaaatttgatatttt 24825308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 30699472 - 30699404
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| |||||||||| |||||||| | ||||||| ||||||||||| ||||||||||||||||||||    
T  30699472 caatgcgtaattttgagtttaaatatctagaataatatattagaaaaaattatgaaaatttgatatttt 30699404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 473 - 588
Target Start/End: Original strand, 6188466 - 6188581
Alignment:
Q  473 tccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttat 572  Q
    ||||||||| ||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| || |||||| |||| |||||| ||||    
T  6188466 tccctccgttccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttaaataatatattggaaaaaattat 6188565  T
Q  573 gaaaatttgatatttt 588  Q
    ||||||||||||||||    
T  6188566 gaaaatttgatatttt 6188581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 470 - 577
Target Start/End: Complemental strand, 16969640 - 16969533
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  16969640 tactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 16969541  T
Q  570 tatgaaaa 577  Q
    ||||||||    
T  16969540 tatgaaaa 16969533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 24798353 - 24798471
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||| ||||||||  ||| ||||||||    |||||  ||  |||||| |||||||||| |||||||| |||||||||  ||| |||||| |    
T  24798353 tactccctccgttccttaataagtgacacagttgattcaattacgcataccaatgcgtaattttgagtttaaatatcttgaataataaattggaaaaaat 24798452  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||||||||||||||||||    
T  24798453 tatgaaaatttgatatttt 24798471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 2656527 - 2656595
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| ||||||| || |||||||| ||||||||| |||| |||||| ||||||||||||||||||||    
T  2656527 caatgcgtaattttaagtttaaatatcttgaataatatattggaaaaaattatgaaaatttgatatttt 2656595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 9023051 - 9022983
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatttt 588  Q
    |||||| ||||||||||  ||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  9023051 caatgcgtaattttgagagtaaatatcttgaataatatattgaaaaaaattatgaaaatttgatatttt 9022983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 480 - 569
Target Start/End: Complemental strand, 24949923 - 24949834
Alignment:
Q  480 gtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||| ||||| |||| ||| ||||| |||||||  ||| |||||||||| ||| ||||||||||| ||||||||| | ||| |||||||    
T  24949923 gtcccataatacttgatacaattgaccttattacgcatgtcaatgcataactttcagcttaaatatcttgaataatatgttaaaaaaatt 24949834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 592
Target Start/End: Original strand, 16120739 - 16120803
Alignment:
Q  528 aattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatattttaaaa 592  Q
    ||||||||  |||||||  || |||||| ||||||||||| |||| |||||||||||||||||||    
T  16120739 aattttgatattaaataactttaataatctattagaaaaaattataaaaatttgatattttaaaa 16120803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 525 - 586
Target Start/End: Original strand, 26389212 - 26389273
Alignment:
Q  525 cataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatt 586  Q
    ||||||||| | ||||||||| || |||||| ||||| ||||| |||| |||||||||||||    
T  26389212 cataattttaatcttaaatatttttaataatatattaaaaaaaattataaaaatttgatatt 26389273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 588
Target Start/End: Complemental strand, 5639 - 5519
Alignment:
Q  468 aatactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaa 567  Q
    |||||||||||||||||||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| ||||||    
T  5639 aatactccctccgtcccttaataagtgacacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaa 5540  T
Q  568 tttatgaaaatttgatatttt 588  Q
     ||||||||||||||||||||    
T  5539 attatgaaaatttgatatttt 5519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 470 - 588
Target Start/End: Original strand, 480 - 596
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    ||||||| ||||||| |||||  ||| |||||||||  |||||| |||| |||||||||||||||||||||||||| ||||||||||  | | ||||| |    
T  480 tactcccgccgtcccataatacatgacacagttgaccctattacgtatgtcaatgcataattttgagcttaaatatcttgaataatg--tgataaaaaat 577  T
Q  570 tatgaaaatttgatatttt 588  Q
    ||||||||||| |||||||    
T  578 tatgaaaatttcatatttt 596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 473 - 592
Target Start/End: Original strand, 2026 - 2145
Alignment:
Q  473 tccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatttat 572  Q
    |||||||||||| |||||  ||| ||||||||   |||||| | ||  ||||||||||||||| ||||||||| ||||||||| ||| ||||||| ||||    
T  2026 tccctccgtcccataatacatgacacagttgaacatattacgtctgttaatgcataattttgaacttaaatatcttgaataatatatcagaaaaaattat 2125  T
Q  573 gaaaatttgatattttaaaa 592  Q
    || |||||||||||||||||    
T  2126 gagaatttgatattttaaaa 2145  T

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Target: scaffold0001 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 470 - 592
Target Start/End: Complemental strand, 184227 - 184105
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||||| ||||||  ||| |||||||||   |||||  ||  |||||| |||||||||| |||||||| ||||||||| |||| |||||| |    
T  184227 tactccctccgtcctttaataagtgatacagttgacccaattacgcataccaatgcgtaattttgagtttaaatatcttgaataatatattggaaaaaat 184128  T
Q  570 tatgaaaatttgatattttaaaa 592  Q
    || ||||||||||||||||||||    
T  184127 tacgaaaatttgatattttaaaa 184105  T

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Target: scaffold0281 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 13366 - 13247
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattag-aaaaat 568  Q
    |||||||||||||||||||||| ||| |||||| ||   |||||  ||  |||| ||||||||||| ||||||||| ||||||||| | |||| |||||     
T  13366 tactccctccgtcccttaatatatgacacagttaactccattacgcattccaatacataattttgaccttaaatatcttgaataatatgttagaaaaaaa 13267  T
Q  569 ttatgaaaatttgatatttt 588  Q
    ||||||||||||||||||||    
T  13266 ttatgaaaatttgatatttt 13247  T

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Target: scaffold1248 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 520 - 586
Target Start/End: Original strand, 1309 - 1375
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatt 586  Q
    |||||||||||||| |||||||||||  |||||||| ||||||||||| ||||||||||||||||||    
T  1309 caatgcataattttaagcttaaatatcctgaataatatattagaaaaaattatgaaaatttgatatt 1375  T

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Target: scaffold0952 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 520 - 586
Target Start/End: Complemental strand, 1004 - 938
Alignment:
Q  520 caatgcataattttgagcttaaatatattgaataatgtattagaaaaatttatgaaaatttgatatt 586  Q
    |||||||||||||| |||||||||||  |||||||| ||||||||||| ||||||||||||||||||    
T  1004 caatgcataattttaagcttaaatatcctgaataatatattagaaaaaattatgaaaatttgatatt 938  T

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Target: scaffold0289 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 470 - 588
Target Start/End: Complemental strand, 9384 - 9267
Alignment:
Q  470 tactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatattgaataatgtattagaaaaatt 569  Q
    |||||||||||| || ||||| |||| ||||||||| |||||||  ||  ||||| |||  ||| || |||||||| ||||||||| ||||||||||||     
T  9384 tactccctccgttccataatacttgatacagttgaccttattacgcatatcaatgtatagcttttagtttaaatatcttgaataatatattagaaaaatc 9285  T
Q  570 tatgaaaatttgatatttt 588  Q
    |||| ||||||||||||||    
T  9284 tatg-aaatttgatatttt 9267  T

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Target: scaffold0283 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 469 - 548
Target Start/End: Complemental strand, 3245 - 3166
Alignment:
Q  469 atactccctccgtcccttaatatttgaaacagttgacattattacatatgacaatgcataattttgagcttaaatatatt 548  Q
    |||||||||||||||| |||||  ||| |||||||||  ||||||  ||  |||||||||||||||||||||||||||||    
T  3245 atactccctccgtcccataatacatgacacagttgaccatattacgcataccaatgcataattttgagcttaaatatatt 3166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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