View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3892_low_87 (Length: 277)
Name: NF3892_low_87
Description: NF3892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3892_low_87 |
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Alignment Details
Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 108 - 262
Target Start/End: Original strand, 1762352 - 1762506
Alignment:
| Q |
108 |
gcaacagcatgagctatttcattggttcgcctcctaacaaattatatctttgagtttatgaaatgagagttaacaatgtcttgacaagtactaggaacac |
207 |
Q |
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| T |
1762352 |
gcaagagcatgagctattccattggttcgcctcctaacaaattatatctttgagtttatgaaatgagagttaacaatgtcttgacaagtactaggaacac |
1762451 |
T |
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| Q |
208 |
atccaaattcagtcatgtctattttgttactaagcaataaatctacaattctctt |
262 |
Q |
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| T |
1762452 |
atccaaattcagtcatgtctattttgttactaagcaataaatctacaattctctt |
1762506 |
T |
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