View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3892_low_88 (Length: 272)
Name: NF3892_low_88
Description: NF3892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3892_low_88 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 48166617 - 48166873
Alignment:
| Q |
1 |
agactaggttaaactttgctaggctgaacatgacttgctttgaaaatgttaggcttcaatctgtcctattagtctgccataggctcatttttaaggtttg |
100 |
Q |
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| T |
48166617 |
agactaggttaaactttgctaggctgaacatgacttactttgaaaatgttaggcttcaatctgtcctattagtctgccataggctcatttttaaggtttg |
48166716 |
T |
|
| Q |
101 |
acctgactttttggtaagtccgtttaatagtctatttcacgannnnnnnngacgaaaaatatacaccactaataatggtgtagactgtcataaataaact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
48166717 |
acctgactttttggtaagtccgtttaatagtctatttcacgattttttttgacgaaaaatatacaccactaataatggtgtagattgtcataaataaact |
48166816 |
T |
|
| Q |
201 |
aacaatgaaattgacataatttcgttttgtgaacctagaatcatcaatgaagaaact |
257 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
48166817 |
aacaatgaaattgacataattttgttttgtgaacctagaatcatcaatgaagaaact |
48166873 |
T |
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