View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3895_low_4 (Length: 424)

Name: NF3895_low_4
Description: NF3895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3895_low_4
NF3895_low_4
[»] chr7 (28 HSPs)
chr7 (1-316)||(8783674-8783989)
chr7 (1-275)||(4311083-4311356)
chr7 (122-315)||(13740731-13740928)
chr7 (122-315)||(10449804-10450000)
chr7 (18-315)||(9581223-9581514)
chr7 (18-315)||(9729075-9729366)
chr7 (122-308)||(23513388-23513577)
chr7 (72-236)||(12565395-12565559)
chr7 (2-184)||(16327353-16327535)
chr7 (72-233)||(5395545-5395706)
chr7 (128-236)||(14223338-14223447)
chr7 (2-111)||(540339-540448)
chr7 (2-96)||(14223236-14223330)
chr7 (246-289)||(823967-824010)
chr7 (246-289)||(15064101-15064144)
chr7 (246-289)||(15921822-15921865)
chr7 (246-289)||(16530352-16530395)
chr7 (246-289)||(16635267-16635310)
chr7 (243-289)||(13672167-13672213)
chr7 (246-289)||(16761634-16761677)
chr7 (243-277)||(18595127-18595161)
chr7 (243-277)||(18616523-18616557)
chr7 (243-281)||(20106621-20106659)
chr7 (56-163)||(4462353-4462460)
chr7 (246-286)||(12760864-12760904)
chr7 (246-289)||(11956681-11956724)
chr7 (246-289)||(16151364-16151407)
chr7 (220-289)||(48803655-48803723)
[»] chr3 (20 HSPs)
chr3 (2-315)||(15024016-15024331)
chr3 (16-315)||(12778104-12778406)
chr3 (72-314)||(13096021-13096265)
chr3 (72-315)||(13090462-13090708)
chr3 (1-315)||(20559355-20559671)
chr3 (1-315)||(20561663-20561979)
chr3 (1-315)||(20563971-20564287)
chr3 (2-184)||(6813313-6813496)
chr3 (122-315)||(9362659-9362843)
chr3 (243-289)||(17386105-17386151)
chr3 (133-289)||(3273069-3273225)
chr3 (246-289)||(3341053-3341096)
chr3 (246-289)||(13506375-13506418)
chr3 (243-289)||(11876169-11876215)
chr3 (246-289)||(4369011-4369054)
chr3 (246-289)||(12161925-12161968)
chr3 (246-289)||(16654026-16654069)
chr3 (246-289)||(22166165-22166208)
chr3 (243-289)||(10162046-10162092)
chr3 (243-289)||(15643389-15643435)
[»] chr8 (13 HSPs)
chr8 (72-317)||(25735330-25735574)
chr8 (72-315)||(21855428-21855673)
chr8 (1-315)||(20040654-20040970)
chr8 (72-315)||(17619053-17619299)
chr8 (188-317)||(45562250-45562379)
chr8 (2-184)||(20000746-20000926)
chr8 (246-289)||(11348779-11348822)
chr8 (246-289)||(22368297-22368340)
chr8 (138-289)||(22830239-22830390)
chr8 (246-288)||(21943288-21943330)
chr8 (246-277)||(21825734-21825765)
chr8 (246-289)||(22035352-22035395)
chr8 (243-289)||(22289374-22289420)
[»] chr4 (13 HSPs)
chr4 (72-315)||(45240514-45240760)
chr4 (2-231)||(14687358-14687589)
chr4 (72-315)||(10629063-10629308)
chr4 (56-289)||(11918337-11918570)
chr4 (2-184)||(15349424-15349607)
chr4 (72-233)||(11498270-11498431)
chr4 (72-233)||(18290430-18290588)
chr4 (243-289)||(13821219-13821265)
chr4 (246-289)||(3352929-3352972)
chr4 (246-289)||(15863842-15863885)
chr4 (250-289)||(16680705-16680744)
chr4 (246-286)||(15261920-15261960)
chr4 (18-65)||(42711377-42711424)
[»] chr6 (18 HSPs)
chr6 (2-232)||(19587145-19587374)
chr6 (72-315)||(17817830-17818075)
chr6 (3-315)||(18852333-18852648)
chr6 (1-289)||(23519336-23519623)
chr6 (124-289)||(18189274-18189439)
chr6 (2-184)||(22063091-22063274)
chr6 (238-317)||(19589366-19589445)
chr6 (246-289)||(11218198-11218241)
chr6 (243-289)||(20018098-20018144)
chr6 (243-289)||(22167413-22167459)
chr6 (243-289)||(22581158-22581204)
chr6 (243-289)||(22583948-22583994)
chr6 (243-289)||(22588779-22588825)
chr6 (220-289)||(18010216-18010285)
chr6 (246-289)||(21562311-21562354)
chr6 (246-280)||(29684883-29684917)
chr6 (247-289)||(18446544-18446587)
chr6 (220-289)||(8725797-8725866)
[»] chr5 (16 HSPs)
chr5 (72-315)||(20446500-20446745)
chr5 (126-315)||(24218148-24218340)
chr5 (72-315)||(23602293-23602538)
chr5 (18-315)||(23712309-23712599)
chr5 (124-315)||(21282616-21282810)
chr5 (72-315)||(24938854-24939094)
chr5 (72-233)||(18487724-18487885)
chr5 (137-289)||(22946768-22946920)
chr5 (246-289)||(30764965-30765008)
chr5 (243-289)||(24955035-24955081)
chr5 (220-289)||(21386647-21386716)
chr5 (249-289)||(25118010-25118050)
chr5 (249-289)||(25177101-25177141)
chr5 (249-289)||(20440028-20440068)
chr5 (246-289)||(18071221-18071264)
chr5 (246-289)||(26845977-26846020)
[»] scaffold0485 (1 HSPs)
scaffold0485 (1-252)||(11490-11731)
[»] scaffold0026 (2 HSPs)
scaffold0026 (72-315)||(16681-16927)
scaffold0026 (246-289)||(131967-132010)
[»] scaffold0035 (1 HSPs)
scaffold0035 (2-223)||(52139-52360)
[»] chr1 (13 HSPs)
chr1 (1-315)||(22626612-22626929)
chr1 (2-184)||(27045318-27045501)
chr1 (72-236)||(21786099-21786263)
chr1 (133-289)||(19877395-19877551)
chr1 (243-289)||(8651362-8651408)
chr1 (246-289)||(19783343-19783386)
chr1 (327-404)||(23457738-23457815)
chr1 (138-281)||(8949170-8949313)
chr1 (134-279)||(16384024-16384169)
chr1 (246-289)||(3988418-3988461)
chr1 (246-289)||(22138992-22139035)
chr1 (243-289)||(21800532-21800578)
chr1 (51-103)||(16383944-16383996)
[»] scaffold0012 (2 HSPs)
scaffold0012 (72-315)||(13096-13344)
scaffold0012 (72-315)||(8987-9235)
[»] scaffold0222 (1 HSPs)
scaffold0222 (72-236)||(18221-18385)
[»] scaffold0220 (1 HSPs)
scaffold0220 (72-311)||(11967-12210)
[»] scaffold0113 (1 HSPs)
scaffold0113 (72-312)||(38295-38532)
[»] scaffold0566 (1 HSPs)
scaffold0566 (72-232)||(1005-1165)
[»] scaffold0090 (1 HSPs)
scaffold0090 (2-112)||(29279-29389)
[»] chr2 (13 HSPs)
chr2 (1-236)||(24500727-24500959)
chr2 (128-236)||(25361752-25361861)
chr2 (11-174)||(25339701-25339864)
chr2 (220-289)||(25369348-25369417)
chr2 (220-289)||(25372772-25372841)
chr2 (243-289)||(16773967-16774013)
chr2 (246-289)||(115842-115885)
chr2 (246-289)||(20306544-20306587)
chr2 (243-289)||(24797153-24797199)
chr2 (246-277)||(22870088-22870119)
chr2 (246-289)||(23161236-23161279)
chr2 (246-289)||(23572493-23572536)
chr2 (246-289)||(27629817-27629860)
[»] scaffold0290 (2 HSPs)
scaffold0290 (134-289)||(20356-20511)
scaffold0290 (321-374)||(2601-2654)
[»] scaffold0402 (1 HSPs)
scaffold0402 (138-289)||(6223-6374)
[»] scaffold0384 (1 HSPs)
scaffold0384 (241-315)||(14895-14972)
[»] scaffold0326 (2 HSPs)
scaffold0326 (232-289)||(7829-7886)
scaffold0326 (232-289)||(15731-15788)
[»] scaffold0156 (1 HSPs)
scaffold0156 (232-289)||(8313-8370)
[»] scaffold0059 (2 HSPs)
scaffold0059 (154-289)||(10498-10633)
scaffold0059 (154-289)||(18499-18634)
[»] scaffold0013 (1 HSPs)
scaffold0013 (154-289)||(234765-234900)
[»] scaffold0346 (1 HSPs)
scaffold0346 (243-289)||(5422-5468)
[»] scaffold0506 (1 HSPs)
scaffold0506 (246-289)||(3902-3945)
[»] scaffold0117 (1 HSPs)
scaffold0117 (220-289)||(33349-33418)
[»] scaffold1756 (1 HSPs)
scaffold1756 (246-289)||(994-1037)
[»] scaffold1400 (1 HSPs)
scaffold1400 (246-289)||(307-350)
[»] scaffold0051 (1 HSPs)
scaffold0051 (246-289)||(26238-26281)
[»] scaffold0004 (1 HSPs)
scaffold0004 (246-289)||(19809-19852)
[»] scaffold0022 (1 HSPs)
scaffold0022 (243-289)||(23880-23926)
[»] scaffold0375 (1 HSPs)
scaffold0375 (228-289)||(10878-10939)
[»] scaffold0216 (1 HSPs)
scaffold0216 (220-289)||(9774-9843)
[»] scaffold0116 (1 HSPs)
scaffold0116 (220-289)||(39530-39599)
[»] scaffold0091 (1 HSPs)
scaffold0091 (220-289)||(54586-54655)
[»] scaffold0056 (1 HSPs)
scaffold0056 (220-289)||(41378-41447)
[»] scaffold0020 (2 HSPs)
scaffold0020 (220-289)||(114992-115061)
scaffold0020 (220-289)||(119296-119365)
[»] scaffold2175 (1 HSPs)
scaffold2175 (254-289)||(974-1009)
[»] scaffold0230 (1 HSPs)
scaffold0230 (246-289)||(11791-11834)
[»] scaffold0146 (1 HSPs)
scaffold0146 (246-289)||(21193-21236)
[»] scaffold0037 (2 HSPs)
scaffold0037 (247-289)||(43780-43823)
scaffold0037 (247-289)||(51169-51212)
[»] scaffold0029 (1 HSPs)
scaffold0029 (246-289)||(121700-121743)
[»] scaffold0016 (1 HSPs)
scaffold0016 (246-289)||(195783-195826)
[»] scaffold1879 (1 HSPs)
scaffold1879 (220-289)||(712-782)
[»] scaffold0473 (1 HSPs)
scaffold0473 (220-289)||(12387-12456)
[»] scaffold0078 (1 HSPs)
scaffold0078 (249-289)||(28819-28859)


Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 8783674 - 8783989
Alignment:
Q  1 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacc 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| |||||||||    
T  8783674 ctagataatagttcccctctatccccttgatccattgattcacactcaccccaaacttcctagcaataaaggtgatgattccagctaccattatatcacc 8783773  T
Q  101 cttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaac 200  Q
    |||||||||||          |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||| |||||| ||||||    
T  8783774 cttatcatccgatttctttttagcaattgaaacaagataatcaagcaaataatagcaaatgttaacatggtggttataaattgtagcccacaagataaac 8783873  T
Q  201 aactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtgttattcaacaa 300  Q
    | ||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  8783874 agctcatcagtcctcattattcctacctctttcctaccttatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtgttatccaacag 8783973  T
Q  301 cctaatcacatgttcc 316  Q
    ||||||||||||||||    
T  8783974 cctaatcacatgttcc 8783989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 4311356 - 4311083
Alignment:
Q  1 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacc 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| | ||| ||||||||||||| ||||||||||||||||    
T  4311356 ctagataatagttcccctctatcctcttgatctcttgattcacactc-ccccaaacttcctagaaataaaggtgatgattccacctaccactatatcacc 4311258  T
Q  101 cttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaac 200  Q
    ||||||||||||         ||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  4311257 cttatcatccggtttatttttagcaattgaaataagataatcaagcaaataataacaaatgttaacatggtggttataaagcatagcccacaacataaac 4311158  T
Q  201 aactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtaccta 275  Q
    | |||||  ||||||||||||||||| ||||||||| || ||||||||||||| ||||| |||||||||||||||    
T  4311157 agctcattggtcctcatcattcctacatctttcctaccccatatggtgcaagcgataactctttgaaggtaccta 4311083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 13740928 - 13740731
Alignment:
Q  122 agcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcatt 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| | | || ||||||||||||||    
T  13740928 agcaattgaaacaagataataaagcaaataatagcaaatgttaacatggtggttataaagcatagcccacatcataaatagcacaacagtcctcatcatt 13740829  T
Q  222 cctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg----ttattcaacaacctaatcacatgttc 315  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||| |||||||||||||||    
T  13740828 cctacctcttttctaccccatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtgaagtctattcaacagcctaatcacatgttc 13740731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 122 - 315
Target Start/End: Original strand, 10449804 - 10450000
Alignment:
Q  122 agcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcatt 221  Q
    |||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  10449804 agcaattgaaacaagataataaatcaaataatagcaaatgttaacatggtggttataaagcatagcctacaacataaacaactcaacagtcctcatcatt 10449903  T
Q  222 cctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    ||||||||||| ||| || |||||||||||||||||||| | |||||||||| ||||| ||| |||||   |||||||||| |||||||||||||||    
T  10449904 cctacctcttttctaccccatatggtgcaagccataaccgtgtgaaggtaccaaagcaaaggattgtgaatttattcaacagcctaatcacatgttc 10450000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 315
Target Start/End: Complemental strand, 9581514 - 9581223
Alignment:
Q  18 tctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacccttatcatccggnnnnn 117  Q
    |||||||||||||||||||||||||||||||||| |||| || ||||| |||  |||||||||||| |||||| |||||||||||||||||||||         
T  9581514 tctatcctcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgattccacctaccattatatcacccttatcatccggtttct 9581415  T
Q  118 nnnnagcaattgaaacaagataatcaagc-aaataatagcaaatgttaacagggtggttataaagcatagtcc-acaacataaacaactcatcagtcctc 215  Q
        |  |||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| |||| |||||||||| |           |||    
T  9581414 ttttattaattgaaacaagataatcaagcaaaaaaatagcaaatgttaacatggtggttataaagcat-gtccgacaacataaata----------gctc 9581326  T
Q  216 atcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaacaacctaatcacatg 312  Q
    ||||||||||||||||| |||  | ||||||||||||| |||||| | |||||||||||||||||||||||| |   |||||||||| ||||||||||||    
T  9581325 atcattcctacctcttttctactccatatggtgcaagcaataaccgtgtgaaggtacctaagcacagggttgggaatttattcaacagcctaatcacatg 9581226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 18 - 315
Target Start/End: Complemental strand, 9729366 - 9729075
Alignment:
Q  18 tctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacccttatcatccggnnnnn 117  Q
    |||||||||||||||||||||||||||||||||| |||| || ||||| |||  |||||||||||| |||||| |||||||||||||||||||||         
T  9729366 tctatcctcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgattccacctaccattatatcacccttatcatccggtttct 9729267  T
Q  118 nnnnagcaattgaaacaagataatcaagc-aaataatagcaaatgttaacagggtggttataaagcatagtcc-acaacataaacaactcatcagtcctc 215  Q
        |  |||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||| |||| |||||||||| |           |||    
T  9729266 ttttattaattgaaacaagataatcaagcaaaaaaatagcaaatgttaacatggtggttataaagcat-gtccgacaacataaata----------gctc 9729178  T
Q  216 atcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaacaacctaatcacatg 312  Q
    ||||||||||||||||| |||  | ||||||||| ||| |||||| | |||||||||||||||||||||||| |   |||||||||| ||||||||||||    
T  9729177 atcattcctacctcttttctactccatatggtgccagcaataaccgtgtgaaggtacctaagcacagggttgggaatttattcaacagcctaatcacatg 9729078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 122 - 308
Target Start/End: Complemental strand, 23513577 - 23513388
Alignment:
Q  122 agcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcatt 221  Q
    ||||||||||| | |||||| || |||||||||||||||||||||| |||||||||||||||||| |||||||| ||| | |||| || |||||||||||    
T  23513577 agcaattgaaaaaggataataaatcaaataatagcaaatgttaacatggtggttataaagcatagcccacaacaaaaatagctcaacattcctcatcatt 23513478  T
Q  222 cctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaacaacctaatca 308  Q
    ||||||||||| ||| || ||||||||||||| |||||| | ||||||||||||||||||||||||||   |||||||||| ||||||||    
T  23513477 cctacctcttttctaccccatatggtgcaagcaataaccatgtgaaggtacctaagcacagggttgtgaatttattcaacagcctaatca 23513388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 72 - 236
Target Start/End: Complemental strand, 12565559 - 12565395
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||| ||||||||||||||||||  |         ||||||||||||||||||||||||||||||||||||||| |||| ||| |    
T  12565559 gtgatgattccacctaccattatatcacccttatcatctagtttctttttagcaattgaaacaagataatcaagcaaataatagcaaattttaataggat 12565460  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttccta 236  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  12565459 ggttataaagcatagcccacaacataaacagctcatcaatcctcatcattcctacctctttccta 12565395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 16327353 - 16327535
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| |||| || ||||| |||  |||||||||||| || ||| ||| ||||||    
T  16327353 tagataatagttttcctctatcctcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgattccacctgccattatgtcaccc 16327452  T
Q  102 ttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcat 184  Q
    |||||||||||         | |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  16327453 ttatcatccggtttctttttatcaattgaaacaagataatcaagcaaataatagcaaatgtttacatggtggttataaagcat 16327535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 72 - 233
Target Start/End: Complemental strand, 5395706 - 5395545
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||| |||||||| ||||||||| ||         || ||||||||||||||||||||||||||||||||| ||||||| ||| |    
T  5395706 gtgatgattccacctaccattatatcactcttatcatctggtttctttttagtaattgaaacaagataatcaagcaaataatagcatatgttaataggat 5395607  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttc 233  Q
    |||||||||||| ||||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  5395606 ggttataaagcaaagtccacaacataaacagctcatcgatccttatcattcctacctctttc 5395545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 128 - 236
Target Start/End: Original strand, 14223338 - 14223447
Alignment:
Q  128 tgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtc-cacaacataaacaactcatcagtcctcatcatt-ccta 225  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||| | ||||||||||||||||||| ||||    
T  14223338 tgaaacaagataatcaagcaaataatagcaaatgttaacatggtggttataaagcat-gtctcataacataaatagctcatcagtcctcatcattcccta 14223436  T
Q  226 cctctttccta 236  Q
    |||||||||||    
T  14223437 cctctttccta 14223447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 540339 - 540448
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||||||||| | |||| ||||| ||||    
T  540339 tagataatagttctcatctatcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgattccatccaccattatattaccc 540438  T
Q  102 ttatcatccg 111  Q
    ||||||||||    
T  540439 ttatcatccg 540448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 14223236 - 14223330
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatat 96  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| |||  |||||||||||| |||||| |||||    
T  14223236 tagataatagttctcctctttcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgattccacctaccattatat 14223330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 824010 - 823967
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  824010 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 823967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 15064144 - 15064101
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15064144 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 15064101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 15921822 - 15921865
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15921822 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 15921865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 16530395 - 16530352
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  16530395 gtgcaagccataaccctttgaaggtacctaagtacagggttgtg 16530352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 16635267 - 16635310
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  16635267 gtgcaagccataaccctttgaaggtacctaagtacagggttgtg 16635310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 13672213 - 13672167
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||    
T  13672213 atggtgcaagccataaccctttgaaggtacctaagtacggggttgtg 13672167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 16761634 - 16761677
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  16761634 gtgcaagccataaccatttgaaggtacctaagtacagggttgtg 16761677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 277
Target Start/End: Original strand, 18595127 - 18595161
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaag 277  Q
    |||||||||||||||||||||||||||||||||||    
T  18595127 atggtgcaagccataaccctttgaaggtacctaag 18595161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 277
Target Start/End: Complemental strand, 18616557 - 18616523
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaag 277  Q
    |||||||||||||||||||||||||||||||||||    
T  18616557 atggtgcaagccataaccctttgaaggtacctaag 18616523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 20106659 - 20106621
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcaca 281  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20106659 atggtgcaagccataaccctctgaaggtacctaagcaca 20106621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 163
Target Start/End: Original strand, 4462353 - 4462460
Alignment:
Q  56 cttcctagcactaacggtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatag 155  Q
    |||||||||| ||| ||||||||| ||| |||||||||| ||||  ||||||||||          |||||   ||||||||||||||||||||||||||    
T  4462353 cttcctagcaataaaggtgatgataccacctaccactatgtcacttttatcatccgatttcttgttagcaacaaaaacaagataatcaagcaaataatag 4462452  T
Q  156 caaatgtt 163  Q
    ||| ||||    
T  4462453 caagtgtt 4462460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 12760904 - 12760864
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggtt 286  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  12760904 gtgcaagtcataaccctttgaaggtacttaagcacagggtt 12760864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 11956681 - 11956724
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  11956681 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 11956724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 16151364 - 16151407
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  16151364 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 16151407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 48803655 - 48803723
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||| || | ||||| ||||| || || ||||||||||||||||||||  |||||||    
T  48803655 ttcctacctctttcctaccccaaatggtacaagc-atgactctttgaaggtacctaagcacgtggttgtg 48803723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 4e-85; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 2 - 315
Target Start/End: Complemental strand, 15024331 - 15024016
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||  |||||||||| | |||||||| ||||| |     
T  15024331 tagataatagtacccctctatcctcttgatcccttgattcacactcaccccaaactttctagcaataaaagtgatgattctacctaccactgtatcatct 15024232  T
Q  102 ttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaaca 201  Q
    ||||||||| |         |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  15024231 ttatcatccagtttctttctagcaattgaaacaagataat-aagcgaataatagcaaatgttaacagggtggttataaagcataactcacaacataaaca 15024133  T
Q  202 actcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaac 298  Q
     | || || |||||||||||| ||||||||||||| ||||||||||||||||||||||| |  |||||| |||||| |||||||||||   |||||||||    
T  15024132 gcacaacaatcctcatcattcgtacctctttcctaccctatatggtgcaagccataaccttgggaaggtgcctaagaacagggttgtgaatttattcaac 15024033  T
Q  299 aacctaatcacatgttc 315  Q
    |||||||||| ||||||    
T  15024032 aacctaatcatatgttc 15024016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 16 - 315
Target Start/End: Original strand, 12778104 - 12778406
Alignment:
Q  16 cctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacccttatcatccggnnn 115  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||||| |||  | ||||||  || |||||| |||||||||||||||||||||       
T  12778104 cctctatcctcttgatcccttgattcacactcaccctaaacctcttagcaataaaagggatgatgtcacctaccattatatcacccttatcatccggttt 12778203  T
Q  116 nnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtcc-acaacataaacaactcatcagtcct 214  Q
          | |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||| | |||| || ||||    
T  12778204 ctttttatcaattgaaacaagataatcaagcaaataatagcaaatgttaacatggtgggtataaagcat-gtccgacaacataaatagctcaacattcct 12778302  T
Q  215 catcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaacaacctaatcacat 311  Q
    |||||||||||||||||| |||  | ||||||||||||| |||||| | ||||||||||||||||||||||||||   |||||||||| |||||||||||    
T  12778303 catcattcctacctcttttctactccatatggtgcaagcaataaccgtgtgaaggtacctaagcacagggttgtgaatttattcaacagcctaatcacat 12778402  T
Q  312 gttc 315  Q
    ||||    
T  12778403 gttc 12778406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 72 - 314
Target Start/End: Complemental strand, 13096265 - 13096021
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||||| |||| ||||||         |||||||||||||||||||| || |||||||||||||||||||||| |||    
T  13096265 gtgatgattccacctaccactatatcacctttat-atccggtttctttctagcaattgaaacaagataataaatcaaataatagcaaatgttaacatggt 13096167  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    |||||||||| |||| | |||||||||||| ||||  |||||||||||||||||||| ||| ||| || ||||||||||||| |||||| | ||||||||    
T  13096166 ggttataaagtatagcctacaacataaacagctcaatagtcctcatcattcctaccttttttctaccccatatggtgcaagcaataaccgtgtgaaggta 13096067  T
Q  272 cctaagcacagggttgtg---ttattcaacaacctaatcacatgtt 314  Q
    |||||||||| |||||||   |||||||| | ||||||||||||||    
T  13096066 cctaagcacaaggttgtgaatttattcaatagcctaatcacatgtt 13096021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 72 - 315
Target Start/End: Original strand, 13090462 - 13090708
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||||| |||| ||||||         |||||||||||||||||||| || |||||||||||||||||||||| |||    
T  13090462 gtgatgattccacctaccactatatcacctttat-atccggtttctttctagcaattgaaacaagataataaatcaaataatagcaaatgttaacatggt 13090560  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacc-tctttcctatcctatatggtgcaagccataaccctttgaaggt 270  Q
    |||||||||| |||| | |||||||||||| ||||  ||||||||||||| ||||| | ||| ||| || ||||||||||||| |||||| | |||||||    
T  13090561 ggttataaagtatagcctacaacataaacagctcaatagtcctcatcatttctacctttttttctaccccatatggtgcaagcaataaccgtgtgaaggt 13090660  T
Q  271 acctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    |||||||||||||||||||   |||||||||| |||||||||||||||    
T  13090661 acctaagcacagggttgtgaatttattcaacagcctaatcacatgttc 13090708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 20559671 - 20559355
Alignment:
Q  1 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacc 100  Q
    ||||||| ||||| ||||| ||||| || ||||||| ||||||| | ||| |||| || ||| || | |  |||||||||||| ||||||||||||||||    
T  20559671 ctagatagtagtttccctcaatcctatttatccctttattcacatttacctcaaattttctaacaatgaaagtgatgattccacctaccactatatcacc 20559572  T
Q  101 cttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaac 200  Q
     |||| |||| |         ||||||||||||| |||||| || |||||||||| ||||||||||| |||||||||||||||||| |||||||| |||     
T  20559571 tttat-atccagtttctttctagcaattgaaacaggataataaatcaaataatagtaaatgttaacatggtggttataaagcatagcccacaacaaaaat 20559473  T
Q  201 aactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaa 297  Q
    | |||| || |||||||||||||||||||||| ||| || ||||||||||||| |||||| | |||||||||||||||||| |||||||   ||||||||    
T  20559472 agctcaacattcctcatcattcctacctcttttctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacaaggttgtgaatttattcaa 20559373  T
Q  298 caacctaatcacatgttc 315  Q
    || || ||||| ||||||    
T  20559372 cagccgaatcatatgttc 20559355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 20561979 - 20561663
Alignment:
Q  1 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacc 100  Q
    ||||||| ||||| ||||| ||||| || ||||||| ||||||| | ||| |||| || ||| || | |  |||||||||||| ||||||||||||||||    
T  20561979 ctagatagtagtttccctcaatcctatttatccctttattcacatttacctcaaattttctaacaatgaaagtgatgattccacctaccactatatcacc 20561880  T
Q  101 cttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaac 200  Q
     |||| |||| |         ||||||||||||| |||||| || |||||||||| ||||||||||| |||||||||||||||||| |||||||| |||     
T  20561879 tttat-atccagtttctttctagcaattgaaacaggataataaatcaaataatagtaaatgttaacatggtggttataaagcatagcccacaacaaaaat 20561781  T
Q  201 aactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaa 297  Q
    | |||| || |||||||||||||||||||||| ||| || ||||||||||||| |||||| | |||||||||||||||||| |||||||   ||||||||    
T  20561780 agctcaacattcctcatcattcctacctcttttctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacaaggttgtgaatttattcaa 20561681  T
Q  298 caacctaatcacatgttc 315  Q
    || || ||||| ||||||    
T  20561680 cagccgaatcatatgttc 20561663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 20564287 - 20563971
Alignment:
Q  1 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacc 100  Q
    ||||||| ||||| ||||| ||||| || ||||||| ||||||| | ||| |||| || ||| || | |  |||||||||||| ||||||||||||||||    
T  20564287 ctagatagtagtttccctcaatcctatttatccctttattcacatttacctcaaattttctaacaatgaaagtgatgattccacctaccactatatcacc 20564188  T
Q  101 cttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaac 200  Q
     |||| |||| |         ||||||||||||| |||||| || |||||||||| ||||||||||| |||||||||||||||||| |||||||| |||     
T  20564187 tttat-atccagtttctttctagcaattgaaacaggataataaatcaaataatagtaaatgttaacatggtggttataaagcatagcccacaacaaaaat 20564089  T
Q  201 aactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaa 297  Q
    | |||| || |||||||||||||||||||||| ||| || ||||||||||||| |||||| | |||||||||||||||||| |||||||   ||||||||    
T  20564088 agctcaacattcctcatcattcctacctcttttctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacaaggttgtgaatttattcaa 20563989  T
Q  298 caacctaatcacatgttc 315  Q
    || || ||||| ||||||    
T  20563988 cagccgaatcatatgttc 20563971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 6813496 - 6813313
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||| |||||||| ||||| |||  |||||||||||| |||||| ||||| ||||    
T  6813496 tagataatagttctcatctatcctcttgatcccttgattcatactcacctcaaacttcttagcaataaaagtgatgattccatctaccattatattaccc 6813397  T
Q  102 ttatcatccgg-nnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcat 184  Q
    |||||||||||          | ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  6813396 ttatcatccggttttctttttatcaattgaaacaagataatcaagcaagtaatagcaaatgttaacatggtggttataaagcat 6813313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 122 - 315
Target Start/End: Original strand, 9362659 - 9362843
Alignment:
Q  122 agcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcatt 221  Q
    |||||||||| ||||||||| || |||||||||||||||||||||| |||||||||||      | | ||||||      |||||  ||||| |||||||    
T  9362659 agcaattgaaccaagataataaatcaaataatagcaaatgttaacatggtggttataa------gcctacaaca------actcaatagtccccatcatt 9362746  T
Q  222 cctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    ||||||| ||| ||| || ||||||||||||| |||||| | |||||||||||||||||| |||||||   ||||||||||||||||||||||||||    
T  9362747 cctaccttttttctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacatggttgtgaatttattcaacaacctaatcacatgttc 9362843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 17386151 - 17386105
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17386151 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 17386105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 289
Target Start/End: Complemental strand, 3273225 - 3273069
Alignment:
Q  133 caagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctcttt 232  Q
    |||||||||||||  | ||  ||||| |||| ||| | ||||||| |||||||| ||||||||| || | |||||  |||||  |  |||||| |||  |    
T  3273225 caagataatcaagatagtagaagcaagtgttcacatgatggttattaagcatagcccacaacatgaaaagctcatatgtcctagtgtttcctaactcagt 3273126  T
Q  233 cctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||| || | |||||||||||||||||||||||||| |||||||||||| |||||||    
T  3273125 cctaccccagatggtgcaagccataaccctttgaagatacctaagcacatggttgtg 3273069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 3341053 - 3341096
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  3341053 gtgcaagccataaccctttgaaggtacctaagtacggggttgtg 3341096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 13506375 - 13506418
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  13506375 gtgcaagccataaccctttgaaggtacctaagtacggggttgtg 13506418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 11876169 - 11876215
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||| ||||||||||||||||||||||||||||| || ||||||||    
T  11876169 atggtacaagccataaccctttgaaggtacctaagtacggggttgtg 11876215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 4369054 - 4369011
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  4369054 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 4369011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 12161925 - 12161968
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||  ||||| |||||    
T  12161925 gtgcaagccataaccctttgaaggtacctaattacaggattgtg 12161968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 16654069 - 16654026
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  16654069 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 16654026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 22166165 - 22166208
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  22166165 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 22166208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 10162046 - 10162092
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||| ||||| ||||||||||||||||||||||| || ||||||||    
T  10162046 atggtacaagctataaccctttgaaggtacctaagtacggggttgtg 10162092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 15643435 - 15643389
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||| ||||| ||||||||||||||||||||||| || ||||||||    
T  15643435 atggtacaagctataaccctttgaaggtacctaagtacggggttgtg 15643389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 4e-82; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 72 - 317
Target Start/End: Complemental strand, 25735574 - 25735330
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||  |||||||||||||||| |||||||||||         |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  25735574 gtgatgattccccctaccactatatcacctttatcatccggtttctttcgagcaattgaaacaagataat-aagcgaataatagcaaatgttaacagggt 25735476  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    ||||||||||||||  |||||||||| ||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  25735475 ggttataaagcataacccacaacatatacagctcaacagtcctcatcattcctacttctttcctatcctatatggtgcaagccataaccctttgaaagta 25735376  T
Q  272 cctaagcacagggttgtgttattcaacaacctaatcacatgttcct 317  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||||    
T  25735375 cctaagtacaaggttgtgttattcaacaacctaatcatatgttcct 25735330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 72 - 315
Target Start/End: Original strand, 21855428 - 21855673
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||| ||||||||| |||| ||||||         |||||||||||||||||||| || |||||||||||||||||||||| |||    
T  21855428 gtgatgattccacctaccattatatcacctttat-atccggtttctttttagcaattgaaacaagataataaatcaaataatagcaaatgttaacatggt 21855526  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    ||||||||||||||| | |||||||||||| |||| || |||||||||||||||||||||| ||| || ||||||||||||| |||||| | ||||||||    
T  21855527 ggttataaagcatagcctacaacataaacagctcaacaatcctcatcattcctacctcttttctaccccatatggtgcaagcaataaccgtgtgaaggta 21855626  T
Q  272 cctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    ||||||||||| ||||||   |||||||||| |||||||||||||||    
T  21855627 cctaagcacagagttgtgaatttattcaacagcctaatcacatgttc 21855673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 20040654 - 20040970
Alignment:
Q  1 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacc 100  Q
    ||||||| ||||| ||||| ||||| || ||||||| ||||||| | ||| |||| || ||| || | |  | |||||||||| ||||||||||||||||    
T  20040654 ctagatagtagtttccctcaatcctatttatccctttattcacatttacctcaaattttctaacaatgaaagggatgattccacctaccactatatcacc 20040753  T
Q  101 cttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaac 200  Q
     |||| |||| |         ||||||||||||| || ||| ||  ||||||||||||||||||||| |||||||||||||||||| |||||||| |||     
T  20040754 tttat-atccagtttctttctagcaattgaaacaggaaaataaataaaataatagcaaatgttaacatggtggttataaagcatagcccacaacaaaaat 20040852  T
Q  201 aactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaa 297  Q
    | |||| || |||||||||||||||||||||| ||| || ||||||||||||| |||||| | ||||||||||||||||||||||||||   ||||||||    
T  20040853 agctcaacattcctcatcattcctacctcttttctaccccatatggtgcaagcaataaccgtgtgaaggtacctaagcacagggttgtgaatttattcaa 20040952  T
Q  298 caacctaatcacatgttc 315  Q
    || |||||||| ||||||    
T  20040953 cagcctaatcatatgttc 20040970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 72 - 315
Target Start/End: Complemental strand, 17619299 - 17619053
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||||| |||| ||||||         |||| ||||||||||||||| || |||||||||||||||||||||| |||    
T  17619299 gtgatgattccacctaccactatatcacctttat-atccggtttctttctagcatttgaaacaagataataaatcaaataatagcaaatgttaacatggt 17619201  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacc-tctttcctatcctatatggtgcaagccataaccctttgaaggt 270  Q
    |||||||||| |||| | |||||||||||||||||  ||||||||||||| ||||| | ||| ||| || ||||||||||||| |||||| | |||||||    
T  17619200 ggttataaagtatagcctacaacataaacaactcaatagtcctcatcattactacctttttttctaccccatatggtgcaagcaataaccgtgtgaaggt 17619101  T
Q  271 acctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    ||||||||||| |||||||   |||||||||| |||||||||||||||    
T  17619100 acctaagcacatggttgtgaatttattcaacagcctaatcacatgttc 17619053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 188 - 317
Target Start/End: Original strand, 45562250 - 45562379
Alignment:
Q  188 ccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttg 287  Q
    |||||||||||||| |||| || ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||| |||||    
T  45562250 ccacaacataaacagctcaacaatcctcataattcctacctctttcctaccctatatggtgcaaaccataaccctttgaaggtacctaaacacaaggttg 45562349  T
Q  288 tgttattcaacaacctaatcacatgttcct 317  Q
    ||||||||||||  ||||||| ||||||||    
T  45562350 tgttattcaacagtctaatcatatgttcct 45562379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 20000926 - 20000746
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||   ||||| |||  |||||||||||| |||||| ||||| ||||    
T  20000926 tagataatagttctcatctatcctcttgatcccttgattcacactcaccccaaact---tagcaataaaagtgatgattccatctaccattatattaccc 20000830  T
Q  102 ttatcatccgg-nnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcat 184  Q
    |||||||||||          | ||||| ||||||||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  20000829 ttatcatccggttttctttctatcaattaaaacaagataatcaagcaagtaatagcaaatgttaacgtggtggttataaagcat 20000746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 11348779 - 11348822
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11348779 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 11348822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 22368340 - 22368297
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22368340 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 22368297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 289
Target Start/End: Complemental strand, 22830390 - 22830239
Alignment:
Q  138 taatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctat 237  Q
    ||||||||||| ||| ||||| |||||||||||||||||| |||||||| ||||| ||| || | |||||| |||||  |  | || |  ||  |||||     
T  22830390 taatcaagcaagtaaaagcaagtgttaacagggtggttattaagcatagcccacagcatgaaaagctcatctgtcctagtgttccccaattcagtcctac 22830291  T
Q  238 cctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    || | ||||||  ||||||||| ||||||||||||||||| |||||||||||    
T  22830290 cccaaatggtgtcagccataactctttgaaggtacctaaggacagggttgtg 22830239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 21943288 - 21943330
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgt 288  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21943288 gtgcaagccataaccctttgaaggtacctaagcacagggttgt 21943330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 277
Target Start/End: Complemental strand, 21825765 - 21825734
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaag 277  Q
    ||||||||||||||||||||||||||||||||    
T  21825765 gtgcaagccataaccctttgaaggtacctaag 21825734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 22035352 - 22035395
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||| | ||||| |||||    
T  22035352 gtgcaagccataaccctttgaaggtacctatgtacaggtttgtg 22035395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 22289420 - 22289374
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||| || ||||||||||||||||||| | |||||||    
T  22289420 atggtgcaagccatcactctttgaaggtacctaagcatatggttgtg 22289374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 4e-79; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 72 - 315
Target Start/End: Original strand, 45240514 - 45240760
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||| |||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  45240514 gtgatgattccacctaccattatatcacccttatcatccggtttctttctagcaattgaaacaagataataaagcaaataatagcaaatgttaacatggt 45240613  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||||||    
T  45240614 ggttataaagcatagcccacaacataaacagctcaacagtcctcatcattcctacctcttttctaccccatatggtgcaagccataaccgtgtgaaggta 45240713  T
Q  272 cctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    ||||||||||||||||||   |||||||| | |||||||||||||||    
T  45240714 cctaagcacagggttgtgaatttattcaatagcctaatcacatgttc 45240760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 2 - 231
Target Start/End: Original strand, 14687358 - 14687589
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||||||||| |||||| ||||| ||||    
T  14687358 tagataatagttctcctctatcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgattccacctaccattatattaccc 14687457  T
Q  102 ttatcatccgg-nnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtc-cacaacataaa 199  Q
    |||||||||||          | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| || ||||||||    
T  14687458 ttatcatccggttttctttctatcaattgaaacaagataatcaagcaaataatagcaaatgttaacatggtggttataaagcat-gtctcataacataaa 14687556  T
Q  200 caactcatcagtcctcatcatt-cctacctctt 231  Q
     | |||||||||| |||||||| ||||||||||    
T  14687557 tagctcatcagtcgtcatcattccctacctctt 14687589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 72 - 315
Target Start/End: Complemental strand, 10629308 - 10629063
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||||| |||| ||||||         |||||||||||||||||||| || |||||||||||||||||||||| |||    
T  10629308 gtgatgattccacctaccactatatcacctttat-atccggtttctttctagcaattgaaacaagataataaatcaaataatagcaaatgttaacatggt 10629210  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    |||||||||| |||| | |||||||||||||||||  ||||||||||||||||| || ||| ||| || ||| ||||||||| |||||| | ||||||||    
T  10629209 ggttataaagtatagcctacaacataaacaactcaatagtcctcatcattcctatcttttttctaccccataaggtgcaagcaataaccgtgtgaaggta 10629110  T
Q  272 cctaagcacagggttgt---gttattcaacaacctaatcacatgttc 315  Q
    |||||||||||||||||    |||||||||| ||| |||||||||||    
T  10629109 cctaagcacagggttgttaatttattcaacagcctgatcacatgttc 10629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 56 - 289
Target Start/End: Original strand, 11918337 - 11918570
Alignment:
Q  56 cttcctagcactaacggtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatag 155  Q
    |||||||||| ||| ||||||||| ||| |||||||||| ||||  ||||||||| |         |||||   |||||||||||||||||||||| |||    
T  11918337 cttcctagcaataaaggtgatgataccacctaccactatgtcacttttatcatccagtttcttgttagcaacataaacaagataatcaagcaaatagtag 11918436  T
Q  156 caaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagcca 255  Q
    ||| |||| |||||| |||| || ||||| | ||| ||||||||||  ||||||||||||||||| || || ||||||||| ||||||||||||||||||    
T  11918437 caagtgttcacagggcggttgtagagcattgcccataacataaacagttcatcagtcctcatcatccccacttctttcctaccctatatggtgcaagcca 11918536  T
Q  256 taaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||| |||||||    
T  11918537 taaccctttgaaggtacctaagcacatggttgtg 11918570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 15349424 - 15349607
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||| ||||| |||  |||||||||||| |||||| ||||| ||||    
T  15349424 tagataatagttctcatctatcctcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgattccatctaccattatattaccc 15349523  T
Q  102 ttatcatccgg-nnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcat 184  Q
    |||||||||||          | ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  15349524 ttatcatccggttttctttttatcaattgaaacaagataatcaagcaagtaatagcaaatgttaacatggtggttataaagcat 15349607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 11498270 - 11498431
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||| ||||||||||||||||||  |         |||||||||||||||||||||||||||||||||| ||||||||| ||| |    
T  11498270 gtgatgattccacctaccattatatcacccttatcatctagtttctttttagcaattgaaacaagataatcaagcaaataatagaaaatgttaataggat 11498369  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttc 233  Q
    ||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||    
T  11498370 ggttataaagcatagcccacgacataaacaactcatcaatcctcatcattcctacctctttc 11498431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 233
Target Start/End: Complemental strand, 18290588 - 18290430
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||| |||||||||  ||||||| ||         || |||||||||||||||||||||||||||||||    |||||| ||| |    
T  18290588 gtgatgattccacctaccaatatatcacctgtatcatctggtttctttttagtaattgaaacaagataatcaagcaaataatagt---tgttaataggat 18290492  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttc 233  Q
    |||||||||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  18290491 ggttataaagcatactccacaacataaacagctcatcgatcctcatcattcctacctctttc 18290430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 13821265 - 13821219
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||    
T  13821265 atggtgcaagccataaccctttgaaggtacctaagtacggggttgtg 13821219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 3352972 - 3352929
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  3352972 gtgcaagccattaccctttgaaggtacctaagcaccgggttgtg 3352929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 15863885 - 15863842
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||| |||||||||||||||||| ||||||||    
T  15863885 gtgcaagccataacccgttgaaggtacctaagcaccgggttgtg 15863842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 16680744 - 16680705
Alignment:
Q  250 aagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  16680744 aagccataaccctttgaaggtacctaagtacagggttgtg 16680705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 15261920 - 15261960
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggtt 286  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  15261920 gtgcaagccataaccctttgaaggtacctaagtacggggtt 15261960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 42711377 - 42711424
Alignment:
Q  18 tctatcctcttgatcccttgattcacactcaccccaaacttcctagca 65  Q
    |||||||||||||||| ||||||||||||||||| |||| || |||||    
T  42711377 tctatcctcttgatcctttgattcacactcaccctaaacctcttagca 42711424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 1e-75; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 2 - 232
Target Start/End: Original strand, 19587145 - 19587374
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  19587145 tagataatagttcctctctatcctcttgatcccttgattcagactcaccccaaacttcctagcaataaaggtgatgattccacctaccactatatcaccc 19587244  T
Q  102 ttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaaca 201  Q
    |||||||||||         | |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||    
T  19587245 ttatcatccggtttctttctatcaattgaaacaaga-aatcaagcaaataatagcaaattttaacatggtggttataaagcatagcccacaacataaaca 19587343  T
Q  202 actcatcagtcctcatcattcctacctcttt 232  Q
     |||||  ||||||||||||||| |||||||    
T  19587344 gctcattggtcctcatcattccttcctcttt 19587374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 72 - 315
Target Start/End: Complemental strand, 17818075 - 17817830
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||||| |||| |||| |         |||||||||||||||||||| || |||||||||||||||||||||| |||    
T  17818075 gtgatgattccacctaccactatatcacctttat-atccagtttctttctagcaattgaaacaagataataaatcaaataatagcaaatgttaacatggt 17817977  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||||||    
T  17817976 ggttataaagcatagcctacaacataaacaactcaacagtcctcatcattcctacctcttttctaccccatatggtgcaagccataaccgtgtgaaggta 17817877  T
Q  272 cctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    ||||||||||||||||||   |||||||||| |||||||||||||||    
T  17817876 cctaagcacagggttgtgaatttattcaacagcctaatcacatgttc 17817830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 3 - 315
Target Start/End: Complemental strand, 18852648 - 18852333
Alignment:
Q  3 agataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccct 102  Q
    ||||| ||||| ||||| ||||| || |||||||  |||||| | ||| |||| || ||| || | |  |||||||||||| |||||||||||||||| |    
T  18852648 agatagtagtttccctcaatcctatttatccctttgttcacatttacctcaaattttctaacaatgaaagtgatgattccacctaccactatatcacctt 18852549  T
Q  103 tatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaa 202  Q
    ||| ||||||         ||  |||||||| ||||||| || |||||||||||||||||||||| |||||||||||||||||  ||||||||||||||     
T  18852548 tat-atccggtttctttctagtgattgaaactagataataaatcaaataatagcaaatgttaacatggtggttataaagcataacccacaacataaacag 18852450  T
Q  203 ctcatcagtcctcatcattcctacc-tctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaac 298  Q
    |||| || ||||||||| ||||||| | ||| ||| || |||||||||||||||||||| | ||||||||||||||||||||||||||   |||||||||    
T  18852449 ctcaacaatcctcatcagtcctacctttttttctaccccatatggtgcaagccataaccatgtgaaggtacctaagcacagggttgtgaatttattcaac 18852350  T
Q  299 aacctaatcacatgttc 315  Q
    | |||||||||||||||    
T  18852349 agcctaatcacatgttc 18852333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 23519336 - 23519623
Alignment:
Q  1 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacc 100  Q
    ||||||||||||||||||| ||||| |||| ||| |   ||| | |||| | ||||||||||||| | | ||||||||||||| |||||||||||||||     
T  23519336 ctagataatagttcccctcaatcctattgacccccttgctcatattcactctaaacttcctagcaatgaaggtgatgattccacctaccactatatcact 23519435  T
Q  101 cttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaac 200  Q
     |||||||| |          ||||||||||||||||||||||| |||||| |||  ||||| | |||||| |||||||||||||| ||||||||||||     
T  23519436 tttatcatctgatttctttttagcaattgaaacaagataatcaatcaaatagtagagaatgtgaccagggtagttataaagcatagcccacaacataaat 23519535  T
Q  201 aactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    | || ||| ||  ||||||||||||||||||||||| || ||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  23519536 agctgatcggta-tcatcattcctacctctttcctaccccatatggtgcaaaccataaccctctgaaggtagctaagcacagggttgtg 23519623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 124 - 289
Target Start/End: Original strand, 18189274 - 18189439
Alignment:
Q  124 caattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcc 223  Q
    |||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| | ||||||||||| |||||  |||||| |||||||     
T  18189274 caattgaaacaagataataaatcaaataatagcaaatgttaacatggtggttataaagcatagccaacaacataaacgactcaatagtccttatcattca 18189373  T
Q  224 tacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||| || ||| || ||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  18189374 tacctcatttctaccccatattatgcaagccataaccctttgaaggtacctaagcacagagttgtg 18189439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 22063091 - 22063274
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||| ||||| |||  |||||||||||| |||||| ||||| ||||    
T  22063091 tagataatagttctcatctatcctcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgattccatctaccattatattaccc 22063190  T
Q  102 ttatcatccgg-nnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcat 184  Q
    |||||||||||          | ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  22063191 ttatcatccggttttctttttatcaattgaaacaagataatcaagcaagtaatagcaaatgttaacatggtggttataaagcat 22063274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 238 - 317
Target Start/End: Original strand, 19589366 - 19589445
Alignment:
Q  238 cctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtgttattcaacaacctaatcacatgttcct 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19589366 cctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtgttattcaacaacttaatcacatgttcct 19589445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 11218241 - 11218198
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  11218241 gtgcaagccataaccctttgaaggtacctaagtacagggttgtg 11218198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 20018098 - 20018144
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||    
T  20018098 atggtgcaagccataaccctttgaaggtacctaagtacggggttgtg 20018144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 22167413 - 22167459
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||    
T  22167413 atggtgcaagccataaccctttgaaggtacctaagtacggggttgtg 22167459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 22581158 - 22581204
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  22581158 atggtgcaaaccataaccctttaaaggtacctaagcacagggttgtg 22581204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 22583948 - 22583994
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  22583948 atggtgcaaaccataaccctttaaaggtacctaagcacagggttgtg 22583994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 22588779 - 22588825
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  22588779 atggtgcaaaccataaccctttaaaggtacctaagcacagggttgtg 22588825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 18010285 - 18010216
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||||||||| || | ||||| |||||||| |||||||| |||||||||||||| ||||||||    
T  18010285 ttcctacgtctttcctaccccaaatggtacaagccatgaccctttgtaggtacctaagcacggggttgtg 18010216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 21562311 - 21562354
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  21562311 gtgcaagccataaccctttaaaggtacctaagtacagggttgtg 21562354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 280
Target Start/End: Complemental strand, 29684917 - 29684883
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcac 280  Q
    |||||||||||||||||||||||||||||||||||    
T  29684917 gtgcaagccataaccctttgaaggtacctaagcac 29684883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 18446587 - 18446544
Alignment:
Q  247 tgcaagccataacccttt-gaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  18446587 tgcaagccataacccttttgaaggtacttaagcacagggttgtg 18446544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 8725797 - 8725866
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||| ||| || | ||||| |||||||| || ||||| ||||| |||||||| ||||||||    
T  8725797 ttcctacctcttttctaccccaaatggtacaagccatgactctttggaggtatctaagcactgggttgtg 8725866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 72 - 315
Target Start/End: Original strand, 20446500 - 20446745
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||||| |||| ||||||         |||||||||||||||||||| || |||||||||||||||||||||| |||    
T  20446500 gtgatgattccacctaccactatatcacctttat-atccggtttctttctagcaattgaaacaagataataaatcaaataatagcaaatgttaacatggt 20446598  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    ||||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||||| ||| || |||||||||||||||||||| | ||||||||    
T  20446599 ggttataaagcatagcctacaacataaacagctcaacagtcctcatcattcctacctcttttctaccccatatggtgcaagccataaccatgtgaaggta 20446698  T
Q  272 cctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    |||||||| |||||||||   |||||||||| |||||||||||||||    
T  20446699 cctaagcatagggttgtgaatttattcaacagcctaatcacatgttc 20446745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 126 - 315
Target Start/End: Complemental strand, 24218340 - 24218148
Alignment:
Q  126 attgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattccta 225  Q
    |||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||| |||||||||||| |||||    
T  24218340 attgaaacaagataataaatcaaataatagcaaatgttaacatggtggttataaagcatagcccacaatataaacagctcaacagtcctcatcagtccta 24218241  T
Q  226 cctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    ||| ||| ||| || |||||||||||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||||||||||||||    
T  24218240 ccttttttctaccccatatggtgcaagccataaccgtgtgaaggtacctaagcacagggttgtgaatttattcaacagcctaatcacatgttc 24218148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 72 - 315
Target Start/End: Original strand, 23602293 - 23602538
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||||| |||| ||||||         |||||||||||||||||||| || |||||||||||||||||||||| |||    
T  23602293 gtgatgattccacctaccactatatcacctttat-atccggtttctttctagcaattgaaacaagataataaatcaaataatagcaaatgttaacatggt 23602391  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    |||||||||| ||||   |||||||||||||||||  ||||||||||||| |||||| ||| ||| || ||||||||||||| |||||| | ||||||||    
T  23602392 ggttataaagtatagcgtacaacataaacaactcaatagtcctcatcatttctaccttttttctaccccatatggtgcaagcaataaccgtgtgaaggta 23602491  T
Q  272 cctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    |||||||||| |||||||   ||||||||||||||||||||||||||    
T  23602492 cctaagcacaaggttgtgaatttattcaacaacctaatcacatgttc 23602538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 18 - 315
Target Start/End: Original strand, 23712309 - 23712599
Alignment:
Q  18 tctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacccttatcatccggnnnnn 117  Q
    |||||||||||||||||||||||||||||||||| |||| || |||||  ||  |||||||||||| |||||| |||||||||||||||||||||         
T  23712309 tctatcctcttgatcccttgattcacactcaccctaaacctcttagcaacaaaagtgatgattccacctaccattatatcacccttatcatccggtttct 23712408  T
Q  118 nnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtcc-acaacataaacaactcatcagtcctca 216  Q
        |  ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| |||||||||| | ||||              
T  23712409 ttttattaattgaaacaagataatcaagcaaaaaatagcaaatgttaacatggtggttataaagcat-gtccgacaacataaaaagctca---------- 23712497  T
Q  217 tcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaacaacctaatcacatgt 313  Q
    |||||||||||||||| |||  | ||||||||||||| |||||| | ||||||||||||||||||||||||||   |||||||||| |||||||||||||    
T  23712498 tcattcctacctcttttctactccatatggtgcaagcaataaccgtgtgaaggtacctaagcacagggttgtgaatttattcaacagcctaatcacatgt 23712597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 124 - 315
Target Start/End: Original strand, 21282616 - 21282810
Alignment:
Q  124 caattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcc 223  Q
    |||||||||||||||||| || |||||||||||||||||||||| || ||||||||||||||| |||||||||||||  |||| ||||||| |||| |||    
T  21282616 caattgaaacaagataataaatcaaataatagcaaatgttaacatgggggttataaagcatagcccacaacataaacggctcaacagtccttatcagtcc 21282715  T
Q  224 tacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    ||||| ||| ||| || |||||||||||||||||||| | ||||||||||||||||||||||||||   |||||||||| |||||||||||||||    
T  21282716 taccttttttctaccccatatggtgcaagccataaccgtgtgaaggtacctaagcacagggttgtgaatttattcaacagcctaatcacatgttc 21282810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 72 - 315
Target Start/End: Complemental strand, 24939094 - 24938854
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||| | |||| ||||||         |||||||||||||||||||| || |||||||||||||||||||||| |||    
T  24939094 gtgatgattccacctaccactatatcatctttat-atccgggttttttctagcaattgaaacaagataataaatcaaataatagcaaatgttaacatggt 24938996  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    |||||||||| |||  | |     ||||||||||| |||||||||||||| |||||| ||| ||| || ||||||||||||| |||||| | ||||||||    
T  24938995 ggttataaagtataaccta-----taaacaactcaacagtcctcatcatttctaccttttttctaccccatatggtgcaagcaataaccgtgtgaaggta 24938901  T
Q  272 cctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||    
T  24938900 cctaagcacagggttgtgaatttattcaacaacctaatcacatgttc 24938854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 18487724 - 18487885
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||| ||||||||||||||||||  |         |||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  18487724 gtgatgattccatctaccattatatcacccttatcatctagtttctttttagcaattgaaacaagataatcaagcaaataatagcaaatgttaataggat 18487823  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttc 233  Q
    ||||||||||||||| |||||||||||||| ||||||  |||||||||||||||| ||||||    
T  18487824 ggttataaagcatagcccacaacataaacagctcatcgatcctcatcattcctacatctttc 18487885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 137 - 289
Target Start/End: Complemental strand, 22946920 - 22946768
Alignment:
Q  137 ataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttccta 236  Q
    |||||||||||| ||||||||| |||| ||||||||||||| |||||||| |||||| ||||| |||||||| |||||  || | |||| |||  |||||    
T  22946920 ataatcaagcaagtaatagcaagtgttcacagggtggttattaagcatagcccacaatataaaaaactcatctgtcctagtcttccctaactcagtccta 22946821  T
Q  237 tcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
     || | |||||||||||||||||||||| |||||||||| |||| ||||||||    
T  22946820 ccccagatggtgcaagccataacccttttaaggtacctatgcaccgggttgtg 22946768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 30764965 - 30765008
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  30764965 gtgcaagccataaccctttgaaggtacctaagtacagggttgtg 30765008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 24955035 - 24955081
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||    
T  24955035 atggtgcaagccataaccctttgaaggtacctaagtacggggttgtg 24955081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 21386716 - 21386647
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||| |  | ||||| ||| |||||||||||||||| ||||||||||| ||||||||    
T  21386716 ttcctacctctttcctacctcaaatggtacaatccataaccctttgaagttacctaagcacggggttgtg 21386647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 25118010 - 25118050
Alignment:
Q  249 caagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  25118010 caagccataaccctttgaaggtacctaagtacagggttgtg 25118050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 25177101 - 25177141
Alignment:
Q  249 caagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  25177101 caagccataaccctttgaaggtacctaagtacagggttgtg 25177141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 20440028 - 20440068
Alignment:
Q  249 caagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  20440028 caagccataaccctttgaaggtacctaagtacggggttgtg 20440068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 18071264 - 18071221
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  18071264 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 18071221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 26846020 - 26845977
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  26846020 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 26845977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 11490 - 11731
Alignment:
Q  1 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| |||||| || |||||     
T  11490 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaactttctagcaataaaggtgatgattccacctaccattacatcact 11589  T
Q  101 cttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaac 200  Q
    ||||||||||||         ||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||||| |||    
T  11590 cttatcatccggtttctttttagcaattgaaacaagataatca----------agcaaatgttaacagggtggttataaagcatagcccacaacattaac 11679  T
Q  201 aactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaag 252  Q
    |  ||||||||||||||||| |||||||||||||||  | ||||||||||||    
T  11680 agttcatcagtcctcatcatccctacctctttcctactccatatggtgcaag 11731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 72 - 315
Target Start/End: Complemental strand, 16927 - 16681
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    ||||||||||||  ||||||||||||||| |||| ||||||         | |||||||||||||||||| || |||||||||||||||||||||| |||    
T  16927 gtgatgattccacttaccactatatcacctttat-atccggtttctttctaccaattgaaacaagataataaatcaaataatagcaaatgttaacatggt 16829  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    ||||||||||||||| |||||||||||||  |||| ||||||| ||||||| ||||||||| ||| || |||||||||||||||||||||||||||||||    
T  16828 ggttataaagcatagcccacaacataaacggctcaacagtccttatcattcatacctctttgctaccccatatggtgcaagccataaccctttgaaggta 16729  T
Q  272 cctaagcacagggttgtg----ttattcaacaacctaatcacatgttc 315  Q
    ||||||||||||||||||     ||||||| | |||||||||||||||    
T  16728 cctaagcacagggttgtgaagtctattcaatagcctaatcacatgttc 16681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 132010 - 131967
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  132010 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 131967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 52139 - 52360
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| |||| || ||||| |||  |||||||||||| |||||| ||||||||||    
T  52139 tagataatagttttcctctatcctcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgattccacctaccattatatcaccc 52238  T
Q  102 ttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtc-cacaacataaac 200  Q
    |||| ||| ||         | |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||| || ||||||||     
T  52239 ttataatctggtttctttttatcaattgaaacaagaaaatcaagcaaataatagcaaatgttaacatggtggttataaagcat-gtctcataacataaat 52337  T
Q  201 aactcatcagtcctcatcattcc 223  Q
    | |||||||||||||||||||||    
T  52338 agctcatcagtcctcatcattcc 52360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 6e-47; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 22626612 - 22626929
Alignment:
Q  1 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacc 100  Q
    ||||||| ||||| ||||| ||||| || |||||||  |||| | | ||| |||| |||||| || | |  |||||||||||| ||||||||| ||||||    
T  22626612 ctagatagtagtttccctcaatcctatttatccctttgttcatatttacctcaaatttcctaacaatgaaagtgatgattccacctaccactacatcacc 22626711  T
Q  101 cttatcatccggnnnnnnnnnagcaattgaaacaagataatcaa-gcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaa 199  Q
     | || ||||||         |||||||||||||||||||| || |||||||||||||||| ||| || |||||||||||||||||  ||| ||||||||    
T  22626712 ttcat-atccggtttctttatagcaattgaaacaagataataaaagcaaataatagcaaattttaccatggtggttataaagcatatccca-aacataaa 22626809  T
Q  200 caactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg----ttattc 295  Q
    || |||| ||||||||||||||||||||||||| ||| || |||||||||||| || ||| |||| |||||||||||||||| |||| ||     |||||    
T  22626810 cagctcaacagtcctcatcattcctacctcttttctaccccatatggtgcaagtcaaaactctttcaaggtacctaagcacaaggttatgaagtctattc 22626909  T
Q  296 aacaacctaatcacatgttc 315  Q
    ||||||||||||||||||||    
T  22626910 aacaacctaatcacatgttc 22626929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 27045501 - 27045318
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||| ||||| |||  |||||||||||| |||||| ||||| ||||    
T  27045501 tagataatagttctcatctatcctcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgattccatctaccattatattaccc 27045402  T
Q  102 ttatcatccgg-nnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcat 184  Q
    |||||||| ||          | ||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||    
T  27045401 ttatcatctggttttctttttatcaattgaaacaagataatcaagcaagtaatagcaaatgttaacatgatggttataaagcat 27045318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 72 - 236
Target Start/End: Original strand, 21786099 - 21786263
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||| ||||||||||||||||||  |         |||||||||||||||||||||||||||||||||||||||||||| | | |    
T  21786099 gtgatgattccacctaccattatatcacccttatcatctagtttctttttagcaattgaaacaagataatcaagcaaataatagcaaatgttaataagat 21786198  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttccta 236  Q
    ||||||||||||||| |||||||||||||| || |||  ||||||| ||||||||||||||||||    
T  21786199 ggttataaagcatagcccacaacataaacagcttatcgatcctcattattcctacctctttccta 21786263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 133 - 289
Target Start/End: Original strand, 19877395 - 19877551
Alignment:
Q  133 caagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctcttt 232  Q
    |||||||||||||||| ||| ||||| |||| ||||| ||||||| |||||||| |||||||||||| | |||||  |||||  |  |||| | |||  |    
T  19877395 caagataatcaagcaagtaaaagcaagtgttcacaggatggttatgaagcatagcccacaacataaaaagctcatatgtcctagtgtttcccaactcagt 19877494  T
Q  233 cctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19877495 cctaccccatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 19877551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 8651408 - 8651362
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  8651408 atggtgcaagccataacccttttaaggtacctaagcacagggttgtg 8651362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 19783386 - 19783343
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  19783386 gtgcaagccataaccctttgaaggtacctaagtacagggttgtg 19783343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 404
Target Start/End: Complemental strand, 23457815 - 23457738
Alignment:
Q  327 tcggatagttgatgaaaggcatggaaagagtatgatggatgtgtcctcccttaagtgagtcaagagaaactgaagtca 404  Q
    ||||||| | |||||||||| |||||| | ||||||| ||||||||| ||| |||||| || ||||||||||||||||    
T  23457815 tcggataatcgatgaaaggcgtggaaaaattatgatgaatgtgtccttcctcaagtgaatcgagagaaactgaagtca 23457738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 281
Target Start/End: Original strand, 8949170 - 8949313
Alignment:
Q  138 taatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctat 237  Q
    ||||||||||| ||| ||||| ||||||| |||||||| | |||||||| |||||||||||| |  ||||| |||||  |  | || |  ||  ||||      
T  8949170 taatcaagcaagtaaaagcaagtgttaacggggtggttgttaagcatagcccacaacataaagagttcatctgtcctagtgttccccaattcagtccttc 8949269  T
Q  238 cctatatggtgcaagccataaccctttgaaggtacctaagcaca 281  Q
    || | ||| |||||||||||| ||||||||||||||||||||||    
T  8949270 cccaaatgttgcaagccataaacctttgaaggtacctaagcaca 8949313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 279
Target Start/End: Original strand, 16384024 - 16384169
Alignment:
Q  134 aagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttc 233  Q
    ||||||||||||||  ||| || || |||| ||||| || | || |||||||| ||| | |||||| | |||||| |||||  |   ||||| |||||||    
T  16384024 aagataatcaagcatgtaaaagaaagtgttcacaggatgatcattaagcatagcccaaagcataaagagctcatctgtcctagttggtcctaactctttc 16384123  T
Q  234 ctatcctatatggtgcaagccataaccctttgaaggtacctaagca 279  Q
    ||| || | |||||||||||||||||||||  ||| ||||||||||    
T  16384124 ctaccccagatggtgcaagccataacccttacaagatacctaagca 16384169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 3988461 - 3988418
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  3988461 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 3988418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 22139035 - 22138992
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  22139035 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 22138992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 21800532 - 21800578
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||| ||||| ||||||||||||||||||||||| || ||||||||    
T  21800532 atggtacaagctataaccctttgaaggtacctaagtacggggttgtg 21800578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 16383944 - 16383996
Alignment:
Q  51 ccaaacttcctagcactaacggtgatgattccaactaccactatatcaccctt 103  Q
    ||||||||||||||| |||  |||||||| ||| |||||||||| ||||||||    
T  16383944 ccaaacttcctagcaataaaagtgatgataccacctaccactatctcaccctt 16383996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 72 - 315
Target Start/End: Original strand, 13096 - 13344
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||||| |||| |||||          ||| |||||||||||||||| || ||||||||||| |||||||||| |||    
T  13096 gtgatgattccacctaccactatatcacctttat-atccgatttctttctagcgattgaaacaagataataaatcaaataatagcgaatgttaacatggt 13194  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacc---tctttcctatcctatatggtgcaagccataaccctttgaag 268  Q
    | ||||||||||||| | ||| |||||||| |||| ||| |||||||| |||||||   | ||| ||| || |||||||||||||||||||| | |||||    
T  13195 gtttataaagcatagcctacatcataaacagctcaacagccctcatcagtcctacctttttttttctaccccatatggtgcaagccataaccgtgtgaag 13294  T
Q  269 gtacctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    |||||||||||||||||||||   |||||||||| |||||||||||||||    
T  13295 gtacctaagcacagggttgtgaatttattcaacatcctaatcacatgttc 13344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 72 - 315
Target Start/End: Original strand, 8987 - 9235
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||||| |||| |||||          ||| |||||||||||||||| || ||||||||||| |||||||||| |||    
T  8987 gtgatgattccacctaccactatatcacctttat-atccgatttctttctagcgattgaaacaagataataaatcaaataatagcgaatgttaacatggt 9085  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacc---tctttcctatcctatatggtgcaagccataaccctttgaag 268  Q
    | ||||||||||||| | ||| |||||||| |||| ||| |||||||| |||||||   | ||| ||| || ||||||||||||| |||||| | |||||    
T  9086 gtttataaagcatagcctacatcataaacagctcaacagccctcatcagtcctacctttttttttctaccccatatggtgcaagcaataaccgtgtgaag 9185  T
Q  269 gtacctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    |||||||||||||||||||||   |||||||||| |||||||||||||||    
T  9186 gtacctaagcacagggttgtgaatttattcaacatcctaatcacatgttc 9235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 72 - 236
Target Start/End: Complemental strand, 18385 - 18221
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||| ||||| ||||||||||||  |         |||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  18385 gtgatgattccacctaccattatataacccttatcatctagtttctttttagcaattgaaacaagataatcaagcaaataatagcaaatgttaataggat 18286  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttccta 236  Q
    ||||||||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||    
T  18285 ggttataaagcatagcccacaacataaacagctcatcgatcctcatcattcctacctctttccta 18221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 72 - 311
Target Start/End: Original strand, 11967 - 12210
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    ||||||||||||  ||||||||||||||| |||| ||||||         |||||||||||||||||||| || ||||||||||||||||||| || |||    
T  11967 gtgatgattccacttaccactatatcacctttat-atccggtttctttctagcaattgaaacaagataataaatcaaataatagcaaatgttaccatggt 12065  T
Q  172 ggttataaa-gcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttc-ctatcctatatggtgcaagccataaccctttgaagg 269  Q
    ||||| ||| | |||| | |||||||||||| || | ||||||||||||||||||||| |||  ||| || |||||||||||||||||||| | ||||||    
T  12066 ggttaaaaaagtatagcctacaacataaacagcttaacagtcctcatcattcctacctttttttctaccccatatggtgcaagccataaccgtgtgaagg 12165  T
Q  270 tacctaagcacagggttgtg---ttattcaacaacctaatcacat 311  Q
    ||||||||||||||||||||   |||||||| | |||||||||||    
T  12166 tacctaagcacagggttgtgagtttattcaatagcctaatcacat 12210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 312
Target Start/End: Original strand, 38295 - 38532
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||||||||||| | |||| ||||||         |||||||||||||||||||| || |||||||||||||||||||||| |||    
T  38295 gtgatgattccacctaccactatatcatctttat-atccggtttctttctagcaattgaaacaagataataaatcaaataatagcaaatgttaacatggt 38393  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagccataaccctttgaaggta 271  Q
    |||||||||| |||| | |     |||||||||||  ||||||||||||| |||||| ||| ||| ||  |||||||||||| |||||| | |||| |||    
T  38394 ggttataaagtatagccta-----taaacaactcaatagtcctcatcatttctaccttttttctaccccttatggtgcaagcaataaccgtgtgaacgta 38488  T
Q  272 cctaagcacagggttgtg---ttattcaacaacctaatcacatg 312  Q
    ||||||||||||||||||   |||||||||| ||||||||||||    
T  38489 cctaagcacagggttgtgaatttattcaacagcctaatcacatg 38532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 1165 - 1005
Alignment:
Q  72 gtgatgattccaactaccactatatcacccttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggt 171  Q
    |||||||||||| |||||| ||||||||||||||||||  |         |||||||||||||||||||||||||||||||||| ||||||||| ||| |    
T  1165 gtgatgattccacctaccattatatcacccttatcatctagtttctttttagcaattgaaacaagataatcaagcaaataatagaaaatgttaataggat 1066  T
Q  172 ggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctcttt 232  Q
    ||||||||||||||| ||| |||||||||| ||||||  |||||||||||| |||||||||    
T  1065 ggttataaagcatagcccataacataaacagctcatcgatcctcatcattcttacctcttt 1005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 29389 - 29279
Alignment:
Q  2 tagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcaccc 101  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||| ||||| |||  |||||||||||| |||||| ||||| ||||    
T  29389 tagataatagttctcatctatcctcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgattccatctaccattatattaccc 29290  T
Q  102 ttatcatccgg 112  Q
    |||||||||||    
T  29289 ttatcatccgg 29279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 8e-31; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 24500959 - 24500727
Alignment:
Q  1 ctagataatagttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacc 100  Q
    ||||||| ||||| ||||| ||||| ||||||||||  |||| | | ||| |||| || ||| || | |  |||||||||||| ||| ||||| ||||||    
T  24500959 ctagatagtagtttccctcaatcctattgatccctttgttcatatttacctcaaattttctaacaatgaaagtgatgattccacctaacactacatcacc 24500860  T
Q  101 cttatcatccggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaac 200  Q
     |||| ||||||         |||||| ||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  24500859 gttat-atccggtttctttctagcaatagaaacaagataat-aagcgaataatagcaaatgttaatagggtggttataaagcatagcccacaacataaac 24500762  T
Q  201 aactcatcagtcctcatcattcctacctctttccta 236  Q
    | ||||  |||||||||||||||  |||||||||||    
T  24500761 agctcactagtcctcatcattcc-ccctctttccta 24500727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 25361861 - 25361752
Alignment:
Q  128 tgaaacaagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtc-cacaacataaacaactcatcagtcctcatcatt-ccta 225  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||| || |||||||| | ||||||||||||||||||| ||||    
T  25361861 tgaaacaagataatcaagcaaataatagcaaattttaacatggtggttataaagcat-gtctcataacataaatagctcatcagtcctcatcattcccta 25361763  T
Q  226 cctctttccta 236  Q
    |||||||||||    
T  25361762 cctctttccta 25361752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 25339701 - 25339864
Alignment:
Q  11 gttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagcactaacggtgatgattccaactaccactatatcacccttatcatcc 110  Q
    ||||||||||||||| |||||||||| | ||||||| || ||||||||||||||| | | ||||||||| ||| ||||||  |||||||| ||||||||     
T  25339701 gttcccctctatcctattgatccctttactcacacttactccaaacttcctagcaatgaaggtgatgataccacctaccatcatatcacctttatcatct 25339800  T
Q  111 ggnnnnnnnnnagcaattgaaacaagataatcaagcaaataatagcaaatgttaacagggtggt 174  Q
    ||         |||||||||| |||||||||||||||||| ||| ||| |||| | ||||||||    
T  25339801 ggtttctttttagcaattgaagcaagataatcaagcaaatgataacaagtgttgatagggtggt 25339864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 25369348 - 25369417
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||  | ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  25369348 ttcctacctctttcctatctcaaatggtacaagccataaccctttgaaggtacctaagcacggggttgtg 25369417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 25372772 - 25372841
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||| |||| ||||| |||||||| || |||||||||||||||||||| ||||||||    
T  25372772 ttcctacctctttcctaccctaaatggtacaagccatgactctttgaaggtacctaagcacggggttgtg 25372841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 16774013 - 16773967
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||    
T  16774013 atggtgcaagccataaccctttgaaggtacctaagtacggggttgtg 16773967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 115885 - 115842
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  115885 gtgcaagccataaccctttgaaggtacctaagtacggggttgtg 115842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 20306544 - 20306587
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  20306544 gtgcaagccataaccctttgaaggtacctaagtacggggttgtg 20306587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 24797153 - 24797199
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||||    
T  24797153 atggtgcaagccataacccgttgaaggtacctaagtacggggttgtg 24797199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 277
Target Start/End: Complemental strand, 22870119 - 22870088
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaag 277  Q
    ||||||||||||||||||||||||||||||||    
T  22870119 gtgcaagccataaccctttgaaggtacctaag 22870088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 23161236 - 23161279
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||| |||||||||||||||||||| || ||||||||    
T  23161236 gtgcaagccattaccctttgaaggtacctaagtacggggttgtg 23161279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 23572493 - 23572536
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||| |||||||||||||||||||| || ||||||||    
T  23572493 gtgcaagccattaccctttgaaggtacctaagtacggggttgtg 23572536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 27629860 - 27629817
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||| |||||||||||||||||||| || ||||||||    
T  27629860 gtgcaagccattaccctttgaaggtacctaagtacggggttgtg 27629817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 134 - 289
Target Start/End: Original strand, 20356 - 20511
Alignment:
Q  134 aagataatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttc 233  Q
    ||||||||||||||| ||| ||||| ||||||| |||||||| | |||||||| ||||||||| || |  ||||| |||||  |  || | |  ||  ||    
T  20356 aagataatcaagcaagtaaaagcaagtgttaacggggtggttgttaagcatagcccacaacatgaagagttcatctgtcctagtgttttccaattcagtc 20455  T
Q  234 ctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||| || | |||||||||||||||||||||||||||||||||||||||||||||||    
T  20456 ctaccccaaatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 20511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 2601 - 2654
Alignment:
Q  321 caaaattcggatagttgatgaaaggcatggaaagagtatgatggatgtgtcctc 374  Q
    ||||| ||||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  2601 caaaactcggatagtcgatgaaaggcgtggtaagaatatgatggatgtgtcctc 2654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 289
Target Start/End: Complemental strand, 6374 - 6223
Alignment:
Q  138 taatcaagcaaataatagcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctat 237  Q
    ||||||||||| ||| ||||||||||||| |||||||||| |||||||| ||| |||||||| | |||||| |||||  |  | |  |  ||  |||||     
T  6374 taatcaagcaagtaaaagcaaatgttaacggggtggttattaagcatagcccataacataaaaagctcatctgtcctagtgttccacaattcagtcctac 6275  T
Q  238 cctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    || | |||||||||||||| || ||||||||||||||||||||| |||||||    
T  6274 cccaaatggtgcaagccatcactctttgaaggtacctaagcacaaggttgtg 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 14895 - 14972
Alignment:
Q  241 atatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg---ttattcaacaacctaatcacatgttc 315  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||||||   |||||||||| |||||||||||||||    
T  14895 atatggtgcaagcaataaccgtgtgaaggtacctaagcacagggttgtgaatttattcaacagcctaatcacatgttc 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 7886 - 7829
Alignment:
Q  232 tcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  7886 tcctaccctagatggtgcaagccataaccctttgaaggtacctaatcacagggttgtg 7829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 289
Target Start/End: Complemental strand, 15788 - 15731
Alignment:
Q  232 tcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  15788 tcctaccctagatggtgcaagccataaccctttgaaggtacctaatcacagggttgtg 15731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 8313 - 8370
Alignment:
Q  232 tcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  8313 tcctaccctagatggtgcaagccataaccctttgaaggtacctaagcacagagttgtg 8370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 10633 - 10498
Alignment:
Q  154 agcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagc 253  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||| || | |||||  |||||  |  | || |  ||  ||||| || | |||||||||||    
T  10633 agcaagtgttaacggggtggttataaagcatagcccacaacatgaaaagctcatatgtcctagtgttccccaattcagtcctaccccaaatggtgcaagc 10534  T
Q  254 cataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||| ||| |||||||    
T  10533 cataaccctttgaaggtacctaagtacatggttgtg 10498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 18634 - 18499
Alignment:
Q  154 agcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagc 253  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||| || | |||||  |||||  |  | || |  ||  ||||| || | |||||||||||    
T  18634 agcaagtgttaacggggtggttataaagcatagcccacaacatgaaaagctcatatgtcctagtgttccccaattcagtcctaccccaaatggtgcaagc 18535  T
Q  254 cataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||| ||| |||||||    
T  18534 cataaccctttgaaggtacctaagtacatggttgtg 18499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 234765 - 234900
Alignment:
Q  154 agcaaatgttaacagggtggttataaagcatagtccacaacataaacaactcatcagtcctcatcattcctacctctttcctatcctatatggtgcaagc 253  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||| || | |||||  |||||  |  | || |  ||  ||||| || | |||||||||||    
T  234765 agcaagtgttaacggggtggttataaagcatagcccacaacatgaaaagctcatatgtcctagtgttccccaattcagtcctaccccaaatggtgcaagc 234864  T
Q  254 cataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||| ||| |||||||    
T  234865 cataaccctttgaaggtacctaagtacatggttgtg 234900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 5422 - 5468
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  5422 atggtgcaagccataaccctttgaaggtacctaagtacagggttgtg 5468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 3902 - 3945
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  3902 gtgcaagccataaccctttgaaggtacctaagtacagggttgtg 3945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 33349 - 33418
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||| | || | ||||| |||||||| || |||||||||||||||||||| ||||||||    
T  33349 ttcctacctctttcccaccccaaatggtacaagccatgactctttgaaggtacctaagcacggggttgtg 33418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1756 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1756
Description:

Target: scaffold1756; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 1037 - 994
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  1037 gtgcaagccataaccctttgaaggtatctaagtacagggttgtg 994  T

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Target: scaffold1400 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1400
Description:

Target: scaffold1400; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 307 - 350
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  307 gtgcaagccataaccctttgaaggtacctaagtatagggttgtg 350  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 26238 - 26281
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||| ||||||||||||||||||||||||| |||||||||||    
T  26238 gtgcaaaccataaccctttgaaggtacctaagtacagggttgtg 26281  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 19809 - 19852
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  19809 gtgcaagccataaccctttgaaggtacctaagtatagggttgtg 19852  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 23926 - 23880
Alignment:
Q  243 atggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||| |||||||||||||||| || ||||||||    
T  23926 atggtgcaagccataaccgtttgaaggtacctaagtacggggttgtg 23880  T

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Target: scaffold0375 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 10939 - 10878
Alignment:
Q  228 tctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||| || | ||||| |||||||| || |||||||||||||||||||| ||||||||    
T  10939 tctttcctaccccaaatggtacaagccatgactctttgaaggtacctaagcacggggttgtg 10878  T

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Target: scaffold0216 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 9843 - 9774
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||| ||| || | ||||| |||| |||| |||||||||||||| |||||||| |||||||    
T  9843 ttcctacctcttttctaccccaaatggtacaagtcatagccctttgaaggtacttaagcacaaggttgtg 9774  T

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Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 39530 - 39599
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||| || | ||||| |||||||| | |||||| ||||||||||||||  |||||||    
T  39530 ttcctacctctttcctaccccaaatggtacaagccatgatcctttgtaggtacctaagcacgaggttgtg 39599  T

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Target: scaffold0091 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 54655 - 54586
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||||||||| || | ||||| |||||||| |||||||| |||||||||||||  ||||||||    
T  54655 ttcctacttctttcctaccccaaatggtacaagccatgaccctttgtaggtacctaagcatggggttgtg 54586  T

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Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 41447 - 41378
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||||||||| || | ||||| |||||||| |||||||| |||||||||||||  ||||||||    
T  41447 ttcctacttctttcctaccccaaatggtacaagccatgaccctttgtaggtacctaagcatggggttgtg 41378  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 115061 - 114992
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||| ||| || | ||||| |||||||| || ||||||||||| |||||||| ||||||||    
T  115061 ttcctacctcttttctaccccaaatggtacaagccatgactctttgaaggtatctaagcactgggttgtg 114992  T

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Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 119365 - 119296
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||| ||| || | ||||| |||||||| || ||||||||||| |||||||| ||||||||    
T  119365 ttcctacctcttttctaccccaaatggtacaagccatgactctttgaaggtatctaagcactgggttgtg 119296  T

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Target: scaffold2175 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold2175
Description:

Target: scaffold2175; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 289
Target Start/End: Complemental strand, 1009 - 974
Alignment:
Q  254 cataaccctttgaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||| |||||||||||||||||    
T  1009 cataaccctttgaaggtatctaagcacagggttgtg 974  T

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Target: scaffold0230 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 11834 - 11791
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  11834 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 11791  T

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Target: scaffold0146 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 21236 - 21193
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  21236 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 21193  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 43823 - 43780
Alignment:
Q  247 tgcaagccataacccttt-gaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  43823 tgcaagccataacccttttgaaggtacctaagcacatggttgtg 43780  T

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Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 51212 - 51169
Alignment:
Q  247 tgcaagccataacccttt-gaaggtacctaagcacagggttgtg 289  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  51212 tgcaagccataacccttttgaaggtacctaagcacatggttgtg 51169  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 121743 - 121700
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||| ||| ||||||||||||||||||||||| ||||||||    
T  121743 gtgcaagtcattaccctttgaaggtacctaagcaccgggttgtg 121700  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 195783 - 195826
Alignment:
Q  246 gtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||| |||||||||||||| || ||||||||    
T  195783 gtgcaagccataaccctctgaaggtacctaagtacggggttgtg 195826  T

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Target: scaffold1879 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1879
Description:

Target: scaffold1879; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 712 - 782
Alignment:
Q  220 ttcctacctctttcctatcct-atatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||||||| ||  | ||||| |||||||| |||||||| ||||||||||||||  |||||||    
T  712 ttcctacctctttcctacccccaaatggtacaagccatgaccctttgtaggtacctaagcacgaggttgtg 782  T

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Target: scaffold0473 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Complemental strand, 12456 - 12387
Alignment:
Q  220 ttcctacctctttcctatcctatatggtgcaagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||| ||| || | ||||| |||||||| || ||||| ||||| |||||||| ||||||||    
T  12456 ttcctacctcttttctaccccaaatggtacaagccatgactctttggaggtatctaagcactgggttgtg 12387  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 28859 - 28819
Alignment:
Q  249 caagccataaccctttgaaggtacctaagcacagggttgtg 289  Q
    ||||||||||||| ||||||||||||||| || ||||||||    
T  28859 caagccataacccgttgaaggtacctaagaacggggttgtg 28819  T

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