View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3898_high_10 (Length: 297)
Name: NF3898_high_10
Description: NF3898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3898_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 22 - 280
Target Start/End: Original strand, 47592044 - 47592302
Alignment:
| Q |
22 |
tttatccatggtttctgatgcttcttctggacctcctcagtactatcatgtagaggaaaattaccaacaaccttattgtgtaaattggcattcttcaact |
121 |
Q |
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| T |
47592044 |
tttatccatggtttctgatgcttcttctggacctccacagtactatcatgtagaggaaaattaccaacaaccttattgtgtaaattggcattcttcaact |
47592143 |
T |
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| Q |
122 |
tccaaagaatccaaaaagaagggtaaagaatatggtaggaaaagtcaacagtcttcacctcttgatgatactgctagttcccctgttcttaactatccca |
221 |
Q |
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| T |
47592144 |
tccaaagaatccaaaaagaagggtaaagaatatggtaggaaaagtcaacagtcttcacctcttgatgatactgctagttcccctgttcttaactatccca |
47592243 |
T |
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| Q |
222 |
aggtaactcacaaagctaatttaatctcttattcacataattataactaattttatttg |
280 |
Q |
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| T |
47592244 |
aggtaactcacaaagctaatttaatctcttattcacataattataactaattttatttg |
47592302 |
T |
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