View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3900_high_10 (Length: 285)

Name: NF3900_high_10
Description: NF3900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3900_high_10
NF3900_high_10
[»] chr5 (30 HSPs)
chr5 (2-205)||(2618109-2618308)
chr5 (208-285)||(8323893-8323970)
chr5 (206-285)||(26534683-26534762)
chr5 (206-283)||(26534506-26534583)
chr5 (206-285)||(791592-791671)
chr5 (206-283)||(130254-130331)
chr5 (206-283)||(8323707-8323784)
chr5 (206-283)||(33377835-33377912)
chr5 (206-285)||(130433-130512)
chr5 (206-283)||(5146690-5146767)
chr5 (209-285)||(42630892-42630968)
chr5 (205-283)||(13823335-13823413)
chr5 (209-283)||(35454637-35454710)
chr5 (206-267)||(6518203-6518264)
chr5 (206-283)||(8489123-8489200)
chr5 (206-283)||(19898941-19899018)
chr5 (206-283)||(42630711-42630788)
chr5 (206-275)||(14388515-14388583)
chr5 (206-275)||(35454451-35454519)
chr5 (206-274)||(14069861-14069928)
chr5 (205-283)||(228716-228794)
chr5 (204-274)||(5146502-5146571)
chr5 (209-275)||(19897228-19897293)
chr5 (206-263)||(791810-791867)
chr5 (206-283)||(40881792-40881867)
chr5 (206-269)||(6518404-6518466)
chr5 (206-274)||(13823150-13823217)
chr5 (223-283)||(40882006-40882066)
chr5 (209-267)||(228987-229044)
chr5 (221-283)||(27319654-27319716)
[»] chr6 (8 HSPs)
chr6 (207-285)||(33022353-33022431)
chr6 (206-283)||(33022164-33022241)
chr6 (207-283)||(7789857-7789933)
chr6 (205-283)||(21389020-21389098)
chr6 (209-275)||(21389217-21389282)
chr6 (217-283)||(7789678-7789743)
chr6 (207-274)||(28472557-28472624)
chr6 (207-274)||(29859746-29859813)
[»] chr4 (13 HSPs)
chr4 (204-285)||(40534148-40534229)
chr4 (206-283)||(3102727-3102804)
chr4 (206-283)||(3102540-3102617)
chr4 (207-283)||(13690216-13690292)
chr4 (206-283)||(9231580-9231657)
chr4 (206-283)||(40533963-40534040)
chr4 (206-275)||(11147014-11147083)
chr4 (206-272)||(5121005-5121071)
chr4 (206-283)||(18381496-18381573)
chr4 (206-283)||(18936864-18936941)
chr4 (206-283)||(37177813-37177890)
chr4 (225-285)||(9231765-9231825)
chr4 (206-285)||(18936676-18936754)
[»] chr3 (13 HSPs)
chr3 (206-285)||(27073093-27073172)
chr3 (206-285)||(33214443-33214522)
chr3 (206-285)||(36274120-36274198)
chr3 (206-283)||(33214626-33214703)
chr3 (208-283)||(10598810-10598885)
chr3 (206-283)||(36635425-36635502)
chr3 (206-283)||(19580497-19580574)
chr3 (206-283)||(33219072-33219149)
chr3 (206-283)||(36274312-36274389)
chr3 (206-268)||(10599000-10599062)
chr3 (206-267)||(27072913-27072974)
chr3 (209-274)||(36635241-36635305)
chr3 (206-269)||(11651000-11651063)
[»] scaffold0214 (2 HSPs)
scaffold0214 (206-283)||(11814-11891)
scaffold0214 (210-285)||(11630-11705)
[»] chr2 (22 HSPs)
chr2 (206-279)||(36059278-36059351)
chr2 (206-285)||(13280020-13280099)
chr2 (206-285)||(42028578-42028657)
chr2 (206-283)||(42028765-42028842)
chr2 (206-285)||(31860270-31860349)
chr2 (206-283)||(15332849-15332926)
chr2 (206-285)||(2059669-2059748)
chr2 (206-285)||(16115046-16115125)
chr2 (206-275)||(31860079-31860148)
chr2 (206-285)||(7317820-7317899)
chr2 (206-283)||(7317635-7317712)
chr2 (206-283)||(31470587-31470663)
chr2 (205-278)||(38085966-38086038)
chr2 (204-283)||(2059488-2059567)
chr2 (207-272)||(3671822-3671886)
chr2 (206-267)||(13279840-13279901)
chr2 (205-283)||(38086154-38086232)
chr2 (206-283)||(16115231-16115308)
chr2 (204-263)||(15330447-15330505)
chr2 (205-272)||(31470776-31470842)
chr2 (205-283)||(3672010-3672088)
chr2 (206-235)||(36059248-36059277)
[»] chr8 (13 HSPs)
chr8 (205-285)||(37994893-37994973)
chr8 (206-283)||(2814431-2814508)
chr8 (206-283)||(41539770-41539847)
chr8 (206-283)||(37994708-37994785)
chr8 (206-283)||(397192-397269)
chr8 (206-283)||(44036814-44036891)
chr8 (206-278)||(41539963-41540034)
chr8 (206-285)||(14193510-14193588)
chr8 (206-283)||(2814243-2814319)
chr8 (206-283)||(397007-397083)
chr8 (206-283)||(14193324-14193400)
chr8 (222-285)||(25101746-25101809)
chr8 (206-269)||(40587991-40588054)
[»] chr1 (25 HSPs)
chr1 (206-285)||(10227712-10227791)
chr1 (210-283)||(19059378-19059451)
chr1 (206-285)||(26552177-26552256)
chr1 (206-272)||(10227910-10227976)
chr1 (206-275)||(23346419-23346488)
chr1 (206-283)||(48871424-48871501)
chr1 (206-283)||(28217706-28217783)
chr1 (206-283)||(50892963-50893040)
chr1 (208-283)||(26551992-26552067)
chr1 (205-275)||(48752589-48752658)
chr1 (207-283)||(39669245-39669321)
chr1 (205-272)||(48871246-48871312)
chr1 (205-272)||(50893161-50893227)
chr1 (215-285)||(19059563-19059633)
chr1 (206-275)||(28217530-28217598)
chr1 (206-275)||(42180571-42180639)
chr1 (207-283)||(50904992-50905070)
chr1 (206-275)||(4156892-4156960)
chr1 (206-275)||(7062192-7062260)
chr1 (206-275)||(41833874-41833943)
chr1 (206-275)||(41834071-41834139)
chr1 (207-275)||(50905107-50905175)
chr1 (233-283)||(7062034-7062084)
chr1 (215-271)||(23346620-23346675)
chr1 (205-272)||(42180770-42180835)
[»] scaffold0135 (2 HSPs)
scaffold0135 (206-283)||(37446-37523)
scaffold0135 (225-285)||(37631-37691)
[»] chr7 (10 HSPs)
chr7 (206-283)||(7298635-7298712)
chr7 (206-283)||(40521203-40521280)
chr7 (206-285)||(19805599-19805678)
chr7 (206-283)||(19804797-19804874)
chr7 (206-275)||(40521016-40521084)
chr7 (206-274)||(7298833-7298900)
chr7 (205-275)||(28949001-28949070)
chr7 (209-275)||(46567960-46568025)
chr7 (206-275)||(16979613-16979681)
chr7 (232-283)||(46568145-46568196)
[»] scaffold0140 (2 HSPs)
scaffold0140 (206-274)||(15847-15915)
scaffold0140 (208-237)||(16045-16074)


Alignment Details
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 2618308 - 2618109
Alignment:
Q  2 gaggaagagaatggagctgcaaaggaaaacaccagagaagagagggtaaagtcaagagcatgcagaggtgacaggttgcacttgcacccactcatgtact 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2618308 gaggaagagaatggagctgcaaaggaaaacaccagagaagagagggtaaagtcaagagcatgcagaggtgacaggttgcacttgcacccactcatgtact 2618209  T
Q  102 gaaagtgtctcaataccaatatttttatgataattattatttttgtggggggactcaaacttaaatgagagaggctttaaactaagcttttgattttgag 201  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2618208 gaaagtgtctcaataccaatatttttatgataatta----ttttgtggggggactcaaacttaaatgagagaggctttaaactaagcttttgattttgag 2618113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 208 - 285
Target Start/End: Complemental strand, 8323970 - 8323893
Alignment:
Q  208 gaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8323970 gaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 8323893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 26534762 - 26534683
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26534762 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 26534683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 26534506 - 26534583
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  26534506 gagaaattcttgtgtaggaacgaacctaacctatcaaccttacaaacaacaaattaaaacatgacacgtcgttgtttt 26534583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 791592 - 791671
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  791592 gagaaatttttgtgtaggaacgaacctaacctaccatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 791671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 130254 - 130331
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  130254 gagaaattcttgtgtaggaacgaacctaacctgtcaaccttacaaacaacaaattaaaacatgacacgtcgttgtttt 130331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 8323707 - 8323784
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||    
T  8323707 gagaaattcttgtgtaggaacgaacctaacctatcatctttacaaacaataaattaaaacatgacacgtcgttgtttt 8323784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 33377912 - 33377835
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  33377912 gagaaattcttatgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgacacgtcattgtttt 33377835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 130512 - 130433
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  130512 gagaaattcttttgtagtaacgaacctaacctatcatccttacaaacaacaaattaaaacataacacgtcgttgttttct 130433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 5146767 - 5146690
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  5146767 gagaaattcttgtgtagaaacgaacctaatatatcattcttacaaacaacaaattaaaacatgacacgtcattgtttt 5146690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 42630968 - 42630892
Alignment:
Q  209 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  42630968 aaattcttgtgtaggcacgaacctaacctatcatccttacaaacaataaattaaaatatgacacgtcgttgttttct 42630892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 13823413 - 13823335
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||| |||||||    
T  13823413 ggagaaattcttgtgtaggaacgaacttaacatatcatttttacaaataacaaattaaaacatgacacgtcattgtttt 13823335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 35454710 - 35454637
Alignment:
Q  209 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||    
T  35454710 aaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtcattgtttt 35454637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 6518203 - 6518264
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacat 267  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6518203 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacat 6518264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 8489123 - 8489200
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  8489123 gagaaattcttgtgtaggaacaaatctaacatatcattcttacaaacaacaaattaaaatatgacacgtcattgtttt 8489200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 19899018 - 19898941
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||| |||||||    
T  19899018 gagaaattcttgtgtaggaacgaacctaacatatcatttttataaacaacaaattaaaacatgacatgtcattgtttt 19898941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 42630711 - 42630788
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||||    
T  42630711 gagaaattcttgtgtatgaacgaacctaacctatcatccttacaaacaacaaactaaaacatgacacttcattgtttt 42630788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 14388583 - 14388515
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  14388583 gagaaattcttgtgtaggaacaaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 14388515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 35454451 - 35454519
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  35454451 gagaaattcttgtgtatgaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 35454519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 14069861 - 14069928
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 274  Q
    |||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  14069861 gagaaattcttgtgtaggaacgaacctaac-tatcattcttataaacaacaaattaaaacatgacacgt 14069928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 228716 - 228794
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||  ||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||  |||||||    
T  228716 ggagaaattactgtgtaggaacgaacctaacatatcattcttataaacaataaattaaaacatgacacgttattgtttt 228794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 5146502 - 5146571
Alignment:
Q  204 tggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 274  Q
    |||||||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  5146502 tggagaaattattgtgtaggaacgaacctaac-tatcattcttacaaacaataaattaaaacatgacacgt 5146571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 19897228 - 19897293
Alignment:
Q  209 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  19897228 aaattattgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 19897293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 791867 - 791810
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaa 263  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  791867 gagaaattcttgtgtaggaacgaacctaacctatcatctttacaaacaacaaattaaa 791810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 40881792 - 40881867
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||| |||||||||||||||||||||||   || ||||||||||| |||||||||||||||||||| |||||||    
T  40881792 gagaaattgttgtgtaggaacgaacctaacatt--attcttacaaacaataaattaaaacatgacacgtcattgtttt 40881867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 6518466 - 6518404
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatga 269  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||| ||||    
T  6518466 gagaaattcttgtgtagtaacgaacctaac-tatcattcttacaaacaacaaattaaaatatga 6518404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 13823150 - 13823217
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 274  Q
    |||||||||||||||||||||||||||||| |||||| | || |||||| ||| |||||||||||||||    
T  13823150 gagaaattcttgtgtaggaacgaacctaac-tatcattcgtataaacaataaactaaaacatgacacgt 13823217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 40882066 - 40882006
Alignment:
Q  223 gaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||| |||||||||||| ||||||||||||||||||||| |||||||||  |||||||    
T  40882066 gaacgaatctaacatatcattcttacaaacaacaaattaaaatatgacacgttattgtttt 40882006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 229044 - 228987
Alignment:
Q  209 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacat 267  Q
    ||||| |||||||| ||||||| |||| |||||| ||||||||||||||||||||||||    
T  229044 aaatttttgtgtagaaacgaacataac-tatcattcttacaaacaacaaattaaaacat 228987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 27319716 - 27319654
Alignment:
Q  221 aggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||| || |||||||||||| ||||||||||||||||||||| |||| || || |||||||    
T  27319716 aggaaccaatctaacatatcattcttacaaacaacaaattaaaatatgaaacatcattgtttt 27319654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 6e-37; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 33022431 - 33022353
Alignment:
Q  207 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33022431 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 33022353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 33022164 - 33022241
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33022164 gagaaattattgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 33022241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 7789933 - 7789857
Alignment:
Q  207 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  7789933 agaaattcttgtgtaggaatgaacctaacatatcattcttacaaacaacaaattaaaacatgacacgtcattgtttt 7789857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 21389020 - 21389098
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  21389020 ggagaaattcttctgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgatacgtcattgtttt 21389098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 21389282 - 21389217
Alignment:
Q  209 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  21389282 aaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 21389217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 7789678 - 7789743
Alignment:
Q  217 gtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| |||||||    
T  7789678 gtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacatgtcattgtttt 7789743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 28472624 - 28472557
Alignment:
Q  207 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 274  Q
    ||||||| || ||||||||||||||||| |||||||  ||| ||||||||||||||| ||| ||||||    
T  28472624 agaaatttttatgtaggaacgaacctaatatatcatttttataaacaacaaattaaatcataacacgt 28472557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 29859813 - 29859746
Alignment:
Q  207 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 274  Q
    ||||||| || ||||||||||||||||| |||||||  ||| ||||||||||||||| ||| ||||||    
T  29859813 agaaatttttatgtaggaacgaacctaatatatcatttttataaacaacaaattaaatcataacacgt 29859746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 40534229 - 40534148
Alignment:
Q  204 tggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40534229 tggagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 40534148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 3102804 - 3102727
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3102804 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 3102727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 3102540 - 3102617
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  3102540 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgatacgtcgttgtttt 3102617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 13690216 - 13690292
Alignment:
Q  207 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  13690216 agaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgatacgtcgttgtttt 13690292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 9231580 - 9231657
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||    
T  9231580 gagaaattcttgtgtaggaacgaacctagcctaccatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 9231657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 40533963 - 40534040
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||    
T  40533963 gagaaattcttgtgtaggaacgaacctaacctatcattcttacaaacaacaaattaaaacatgatacgtcgttgtttt 40534040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 11147014 - 11147083
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  11147014 gagaaattcttgtgtaggaacgaacctaatatatcattcttacaaacaacaaattaaaacatgacacgtc 11147083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 5121071 - 5121005
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 272  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  5121071 gagaaattcttgtgtaggaacaaacctaacatatcattcttacaaacaacaaattaaaacatgacac 5121005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 18381573 - 18381496
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| || |||||||    
T  18381573 gagaaattcttgtgtaggaacgaacctaacatttcattcttacaagcaacaaattaaaacatgacacatcattgtttt 18381496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 18936941 - 18936864
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  18936941 gagaaattcttgtctaggaacgaacctaatatatcattcttacaaacaataaattaaaacatgacacgtcattgtttt 18936864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 37177890 - 37177813
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||||||    
T  37177890 gagaaattcttgtctaggaacgaacataacatatcattcttacaaacaacaaattaaaacatgatacgtcattgtttt 37177813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 9231825 - 9231765
Alignment:
Q  225 acgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  9231825 acgaacctaacctatcatccttacaaacaacaaattaaaacatgctacgtcgttgttttct 9231765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 18936676 - 18936754
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||| ||||| || ||||||    
T  18936676 gagaaattcttgtgtatgaacgaacataac-tatcattcttacaaacaacaaattaaaacatgatacgtcatttttttct 18936754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 27073172 - 27073093
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27073172 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 27073093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 33214443 - 33214522
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33214443 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 33214522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 36274120 - 36274198
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36274120 gagaaatt-ttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 36274198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 33214703 - 33214626
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  33214703 gagaaattcttgtgtaggaacgaacctaacctatcaaccttacaaacaacaaattaaaacatgacacgtcgttgtttt 33214626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 10598810 - 10598885
Alignment:
Q  208 gaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  10598810 gaaattcttgtgtaggaacgaacctaacctatcatctttacaaacaacaaattaaaacatgacacgtcgttgtttt 10598885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 36635502 - 36635425
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  36635502 gagaaattcttgtgtaggaacgaacctaacatatcatttttacaaacaacaaattaaaacatgacacgtcattgtttt 36635425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 19580574 - 19580497
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  19580574 gagaaattcttgtataggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgacatgtcattgtttt 19580497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 33219072 - 33219149
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||||||    
T  33219072 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgattcgtcattgtttt 33219149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 36274389 - 36274312
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||| |||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  36274389 gagaaattcttatgtaggaacgaatctaacctatcatctttacaaacaacaaattaaaacatgacacgtcgttgtttt 36274312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 10599062 - 10599000
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatg 268  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  10599062 gagaaattcttgtgtggaaacgaacctaacatatcatccttacaaacaacaaattaaaacatg 10599000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 27072913 - 27072974
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacat 267  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  27072913 gagaaattcttgtgtaggaacgaacctaatctatcatccttacaaacaacaaattaaaacat 27072974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 274
Target Start/End: Original strand, 36635241 - 36635305
Alignment:
Q  209 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 274  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  36635241 aaattcttgtgtaggaacgaacctaac-tatcattgttacaaacaacaaattaaaacatgacacgt 36635305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 11651000 - 11651063
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatga 269  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||||||| |||||| ||||    
T  11651000 gagaaattcttgtttatgaacgaacctaacatatcattcttacaaacaacaatttaaaatatga 11651063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 11891 - 11814
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11891 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 11814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 210 - 285
Target Start/End: Original strand, 11630 - 11705
Alignment:
Q  210 aattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| || |||||||||    
T  11630 aattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaatatgacacatcattgttttct 11705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 36059351 - 36059278
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttg 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36059351 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttg 36059278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 13280099 - 13280020
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13280099 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgatacgtcgttgttttct 13280020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 42028578 - 42028657
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42028578 gagaaattcttgtgtaggaacgaacctaacctatcattcttacaaacaacaaattaaaacatgacacgtcgttgttttct 42028657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 42028842 - 42028765
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  42028842 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgatacgtcgttgtttt 42028765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 31860349 - 31860270
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  31860349 gagaaattcttgtgtaggaacgaacctaacctaccatccttacaaacaacaaattaaaacatgacacatcgttgttttct 31860270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 15332926 - 15332849
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  15332926 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaataaattaaaacatgacacgtcattgtttt 15332849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 2059748 - 2059669
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2059748 gagaaattattgtgttggaacgaacctaacctatcatccttacaaacaacaaattaaaatatgacacgtcgttgttttct 2059669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 16115046 - 16115125
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16115046 gagaaatttttgtgtaagaacgaacctaacctatcatccttacaaacaacaaattaaaatatgacacgtcgttgttttct 16115125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 31860079 - 31860148
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  31860079 gagaaattcttgtgtaggaacgaacctaacctatcatccttataaacaacaaattaaaacatgacacgtc 31860148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 7317899 - 7317820
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| | ||| ||||||    
T  7317899 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaataaattaaaacatgacacattgtttttttct 7317820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 7317635 - 7317712
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||| | ||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  7317635 gagaaacttttgtgtaggaacgaacctaacctatcatccttactaacaacaaactaaaacatgacacgtcgttgtttt 7317712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 31470587 - 31470663
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| |||||||    
T  31470587 gagaaattcttgtgtaggaacgaacctaac-tatcatttttacaaacaacaaattaaaacatgacacgtcattgtttt 31470663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 38085966 - 38086038
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgtt 278  Q
    ||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||    
T  38085966 ggagaaattcttgtgtaggaacgaaactaac-tatcattcttacaaacaacaaattaaaacatgacacgtcgtt 38086038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 2059488 - 2059567
Alignment:
Q  204 tggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || |||||||    
T  2059488 tggagaaattcttgggtaggaacgaacctaacctatcatccttacaaacaacaaactaaaatatgacacttcattgtttt 2059567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 3671822 - 3671886
Alignment:
Q  207 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 272  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  3671822 agaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacac 3671886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 13279840 - 13279901
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacat 267  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  13279840 gagaaattcttgtgtaggaacgaacctaatctatcatccttacaaacaacaaattaaaacat 13279901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 38086232 - 38086154
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||| ||||||||| || ||||||||||||||| ||||||||||||||||||||| |||| ||||| |||||||    
T  38086232 ggagaaatttttgtgtagggacaaacctaacatatcattcttacaaacaacaaattaaaatatgatacgtcattgtttt 38086154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 16115308 - 16115231
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||| || |||||||    
T  16115308 gagaaatttttgtgtaggaacgaacctaacctatcattcttacaaacaacaaactaaaatatgacacttcattgtttt 16115231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 15330447 - 15330505
Alignment:
Q  204 tggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaa 263  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  15330447 tggagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaataaattaaa 15330505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 31470842 - 31470776
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 272  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||  |||||||    
T  31470842 ggagaaatttttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaataatgacac 31470776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 3672088 - 3672010
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||| || ||||||||| |||| |||||||  ||||||| |||||||||||| || ||||||| |||||||    
T  3672088 ggagaaattcttatggaggaacgaatctaatatatcatttttacaaataacaaattaaaatataacacgtcattgtttt 3672010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 235
Target Start/End: Original strand, 36059248 - 36059277
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaac 235  Q
    ||||||||||||||||||||||||||||||    
T  36059248 gagaaattcttgtgtaggaacgaacctaac 36059277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 37994973 - 37994893
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37994973 ggagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaataaattaaaacatgacacgtcgttgttttct 37994893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 2814508 - 2814431
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  2814508 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgacacgtcattgtttt 2814431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 41539770 - 41539847
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  41539770 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaatatgacacgtcgttgtttt 41539847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 37994708 - 37994785
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  37994708 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaataaattaaaacatgatacgtcgttgtttt 37994785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 397269 - 397192
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||    
T  397269 gagaaattcttgtgtagaaacgaacctaacatatcattcttataaacaacaaattaaaacatgacacgtcattgtttt 397192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 44036814 - 44036891
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  44036814 gagaaattcatgtgtagggacgaacctaacctatcatccttacaaacaacaaattcaaacatgacacgtcgttgtttt 44036891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 41540034 - 41539963
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgtt 278  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  41540034 gagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtcgtt 41539963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 14193588 - 14193510
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| || ||||||    
T  14193588 gagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtcatttttttct 14193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 2814243 - 2814319
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| ||||    
T  2814243 gagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaatcatgacacgtcgttttttt 2814319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 397007 - 397083
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||| |||||| ||| ||||    
T  397007 gagaaattcttgtgcaggaacgaacctaac-tatcattcttacaaacaataaattaaaacataacacgttgttttttt 397083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 14193324 - 14193400
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||| |||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||| || |||||||    
T  14193324 gagaaatttttgt-taggaacgaacctaacatattatttttacaaacaacaaattaaaacatgacacatcattgtttt 14193400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 285
Target Start/End: Original strand, 25101746 - 25101809
Alignment:
Q  222 ggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||| |||||| ||| ||||||||||| ||||| ||||||| | ||||||||||    
T  25101746 ggaacgaacctaacctatcattcttgcaaacaacaaaataaaatatgacacattgttgttttct 25101809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 40588054 - 40587991
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatga 269  Q
    |||||||||| |||||||||||||  ||| |||||||  ||| ||| |||||||||||||||||    
T  40588054 gagaaattctggtgtaggaacgaatttaatatatcatttttataaataacaaattaaaacatga 40587991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 8e-33; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 10227712 - 10227791
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  10227712 gagaaattcttgtgtaggaacgaacctaacctaccatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 10227791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 19059378 - 19059451
Alignment:
Q  210 aattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19059378 aattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 19059451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 26552256 - 26552177
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26552256 gagaaattcttgtgtaggatcgaacctaacctatcatccttacaaacaacaaattaaaatatgacacgtcgttgttttct 26552177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 10227976 - 10227910
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 272  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10227976 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacac 10227910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 23346419 - 23346488
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  23346419 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaataaattaaaacatgacacgtc 23346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 48871501 - 48871424
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||    
T  48871501 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacattgcacgtcattgtttt 48871424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 28217783 - 28217706
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| || |||||||    
T  28217783 gagaaattattgtgtaggaacgaacctaacatatcattcttacaaacaacaaatcaaaacatgacacatcattgtttt 28217706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 50892963 - 50893040
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||| |||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  50892963 gagaaatttttgtgtagcaacgaacttaacatatcattcttacaaacaacaaattaaaacatgacacgtcattgtttt 50893040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 283
Target Start/End: Original strand, 26551992 - 26552067
Alignment:
Q  208 gaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  26551992 gaaattcttgtgtaggaacgaatctaacctatcatccttacaaacaaaaaattaaaatatggcacgtcgttgtttt 26552067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 275
Target Start/End: Complemental strand, 48752658 - 48752589
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  48752658 ggagaaattcttgtgtatgaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 48752589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 39669321 - 39669245
Alignment:
Q  207 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||  |||||||    
T  39669321 agaaattcttgtgtagaaacgaacttaacatatcattcttacaaagaacaaattaaaacatgacacgttattgtttt 39669245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 48871246 - 48871312
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 272  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  48871246 ggagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaataacaaattaaaacatgacac 48871312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 50893227 - 50893161
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 272  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  50893227 ggagaaattcttgtgtaggaacgaacctaac-tatcattattacaaacaacaaattaaaacatgacac 50893161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 19059633 - 19059563
Alignment:
Q  215 ttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||||| ||||||||||||    
T  19059633 ttgtgtaggaacgaacctaacctatcatccttataaagaacaaattaaaatatgacacatcgttgttttct 19059563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 28217530 - 28217598
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||||||| |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  28217530 gagaaattcctgtgtaggaacgaacctaat-tatcattcttacaaacaacaaattaaaacatgacacgtc 28217598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 42180571 - 42180639
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    |||||||||||||||||||||||||||||| || |||  |||||||||||||||||||||||||||||||    
T  42180571 gagaaattcttgtgtaggaacgaacctaac-tagcattattacaaacaacaaattaaaacatgacacgtc 42180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 50904992 - 50905070
Alignment:
Q  207 agaaattcttgtgtaggaacgaacctaacatat--catccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||| ||||  |||  ||||||||||||| ||||||||||||||||| |||||||    
T  50904992 agaaattcttgtgtaggaacgaacctaatatatatcatttttacaaacaacaagttaaaacatgacacgtcattgtttt 50905070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 4156892 - 4156960
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||| || ||||||||||||||||||||    
T  4156892 gagaaattcttgtgtaggaaggaacctaac-tatcattcttacaaataataaattaaaacatgacacgtc 4156960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 7062260 - 7062192
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    |||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||    
T  7062260 gagaaatttttgtgtaggaacgaacctaac-tatcatttttacaaacaacaaattaaaatatgacacgtc 7062192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 41833874 - 41833943
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||||||||||| ||| |||||| |||| ||||||| |||||| |||||||||||||||||||||||||    
T  41833874 gagaaattcttgtatagaaacgaatctaatatatcattcttacacacaacaaattaaaacatgacacgtc 41833943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 41834139 - 41834071
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||||||||||||||||||||||| |||| || |||  |||||||||||||||||||||||||||||||    
T  41834139 gagaaattcttgtgtaggaacgaacataac-tagcattattacaaacaacaaattaaaacatgacacgtc 41834071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 275
Target Start/End: Complemental strand, 50905175 - 50905107
Alignment:
Q  207 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||||| |||||||  |||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  50905175 agaaatttttgtgtaaaaacgaatctaacatatcattcttacaaacaacaaattaaaacatgatacgtc 50905107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 7062034 - 7062084
Alignment:
Q  233 aacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  7062034 aacatatcattcttacaaacaacaaattaaaacatgacacgtcattgtttt 7062084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 23346675 - 23346620
Alignment:
Q  215 ttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgaca 271  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  23346675 ttgtgtaggaacgaacctaac-tatcattcttacaaacaataaattaaaacatgaca 23346620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 42180835 - 42180770
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 272  Q
    |||||||||||||| | | |||||| |||| ||||||| ||||||||||||||| |||||||||||||    
T  42180835 ggagaaattcttgtat-gaaacgaatctaa-atatcattcttacaaacaacaaactaaaacatgacac 42180770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 37446 - 37523
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||    
T  37446 gagaaattcttgtgtaggaacgaacctagcctaccatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 37523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 37691 - 37631
Alignment:
Q  225 acgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  37691 acgaacctaacctatcatccttacaaacaacaaattaaaacatgctacgtcgttgttttct 37631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 7298635 - 7298712
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  7298635 gagaaattcttgtgtaggaacgaacctaacatatcatttttacaaacaacaaattaaaacatgacacgtcattgtttt 7298712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 40521280 - 40521203
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  40521280 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgacacatcattgtttt 40521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 19805678 - 19805599
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttct 285  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  19805678 gagaaattcttgtgtaggaacgaacttaacctatcatccttataaataacaaattaaaacatgacacgtcgttgctttct 19805599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 19804797 - 19804874
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||| ||||||||||    
T  19804797 gagaaattcttgtgtaggaacgaacctaacctattatccttacaaacaacaaattgaaacacgacacatcgttgtttt 19804874  T

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Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 40521016 - 40521084
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  40521016 gagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaatatgacacgtc 40521084  T

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Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 7298900 - 7298833
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 274  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  7298900 gagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacataacacgt 7298833  T

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Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 275
Target Start/End: Complemental strand, 28949070 - 28949001
Alignment:
Q  205 ggagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  28949070 ggagaaatttttgtgtaggaacgaacctaac-tatcattcttacaaacaataaattaaaacatgacacgtc 28949001  T

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Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 46567960 - 46568025
Alignment:
Q  209 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  46567960 aaattcttgtgtaggaacgaacttaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 46568025  T

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Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 16979681 - 16979613
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 275  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||    
T  16979681 gagaaattcttgtgtaggaacgaatctaac-tatcattcttacaaataacaaattaaaacatgacacgtc 16979613  T

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Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 46568196 - 46568145
Alignment:
Q  232 taacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 283  Q
    ||||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  46568196 taacatatcattcttacaaacaacaaattaaaacatgacacatcattgtttt 46568145  T

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Target: scaffold0140 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 15847 - 15915
Alignment:
Q  206 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 274  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15847 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgacacgt 15915  T

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Target: scaffold0140; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 237
Target Start/End: Complemental strand, 16074 - 16045
Alignment:
Q  208 gaaattcttgtgtaggaacgaacctaacat 237  Q
    ||||||||||||||||||||||||||||||    
T  16074 gaaattcttgtgtaggaacgaacctaacat 16045  T

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