View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3900_low_16 (Length: 235)

Name: NF3900_low_16
Description: NF3900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3900_low_16
NF3900_low_16
[»] chr2 (50 HSPs)
chr2 (1-194)||(37037460-37037654)
chr2 (16-89)||(34330131-34330203)
chr2 (16-89)||(37355165-37355240)
chr2 (23-89)||(7278522-7278589)
chr2 (23-89)||(8064982-8065048)
chr2 (3-89)||(14528035-14528121)
chr2 (23-89)||(31644352-31644418)
chr2 (9-69)||(8393365-8393425)
chr2 (9-69)||(15577969-15578029)
chr2 (38-89)||(45214854-45214906)
chr2 (23-89)||(1246321-1246388)
chr2 (23-89)||(17663753-17663820)
chr2 (23-89)||(20362111-20362178)
chr2 (23-89)||(27297706-27297773)
chr2 (26-89)||(44101501-44101563)
chr2 (23-69)||(40345985-40346031)
chr2 (23-89)||(44424724-44424789)
chr2 (23-89)||(15851660-15851728)
chr2 (36-89)||(35178982-35179035)
chr2 (23-89)||(44274427-44274495)
chr2 (23-89)||(7255730-7255795)
chr2 (41-89)||(36174720-36174768)
chr2 (9-69)||(36846912-36846972)
chr2 (1-69)||(43119253-43119321)
chr2 (1-68)||(11121361-11121428)
chr2 (23-89)||(27749596-27749663)
chr2 (23-89)||(28733952-28734019)
chr2 (23-89)||(38449623-38449690)
chr2 (23-79)||(45150651-45150709)
chr2 (2-76)||(28037833-28037907)
chr2 (14-59)||(4124893-4124938)
chr2 (23-87)||(41865846-41865911)
chr2 (38-89)||(13534534-13534586)
chr2 (23-89)||(534594-534661)
chr2 (37-87)||(2048753-2048804)
chr2 (23-89)||(11071796-11071865)
chr2 (34-89)||(25731107-25731162)
chr2 (29-89)||(28264868-28264930)
chr2 (37-89)||(32677604-32677658)
chr2 (23-89)||(38107633-38107700)
chr2 (23-89)||(2131886-2131952)
chr2 (36-89)||(2521222-2521276)
chr2 (23-89)||(38981980-38982045)
chr2 (16-89)||(44421862-44421936)
chr2 (2-59)||(16808716-16808773)
chr2 (2-59)||(16847997-16848054)
chr2 (16-69)||(17250862-17250915)
chr2 (23-79)||(4398493-4398549)
chr2 (23-67)||(14420828-14420872)
chr2 (37-89)||(29971389-29971441)
[»] chr8 (50 HSPs)
chr8 (95-193)||(18951623-18951721)
chr8 (95-185)||(36167218-36167308)
chr8 (95-185)||(41481219-41481309)
chr8 (99-194)||(18965857-18965952)
chr8 (23-89)||(31746316-31746382)
chr8 (25-89)||(10396142-10396207)
chr8 (23-89)||(7772641-7772707)
chr8 (16-89)||(38202895-38202969)
chr8 (16-89)||(1177058-1177133)
chr8 (23-90)||(5191459-5191527)
chr8 (2-89)||(22590504-22590592)
chr8 (3-89)||(45203887-45203974)
chr8 (23-88)||(31252565-31252631)
chr8 (29-89)||(38761272-38761335)
chr8 (26-89)||(38770100-38770164)
chr8 (23-89)||(57098-57165)
chr8 (31-78)||(7172359-7172406)
chr8 (23-89)||(24962275-24962342)
chr8 (23-89)||(43980493-43980560)
chr8 (23-89)||(1769359-1769425)
chr8 (3-59)||(35794930-35794986)
chr8 (16-87)||(45183765-45183837)
chr8 (37-89)||(45283411-45283463)
chr8 (23-70)||(885609-885656)
chr8 (2-69)||(36437652-36437719)
chr8 (23-89)||(40517869-40517936)
chr8 (10-89)||(14907262-14907337)
chr8 (36-89)||(25198418-25198472)
chr8 (24-62)||(30511574-30511612)
chr8 (33-89)||(14522264-14522321)
chr8 (23-89)||(14577560-14577629)
chr8 (23-68)||(17933854-17933899)
chr8 (29-89)||(31673726-31673787)
chr8 (3-89)||(36309485-36309573)
chr8 (23-89)||(4273876-4273943)
chr8 (2-69)||(12894089-12894156)
chr8 (23-89)||(38773258-38773325)
chr8 (23-65)||(40601950-40601992)
chr8 (23-89)||(24512076-24512144)
chr8 (16-89)||(30262443-30262515)
chr8 (10-62)||(5393427-5393479)
chr8 (37-89)||(10709443-10709495)
chr8 (38-70)||(11444109-11444141)
chr8 (34-89)||(12762971-12763027)
chr8 (16-89)||(25185159-25185236)
chr8 (2-62)||(34127343-34127402)
chr8 (2-89)||(34882799-34882887)
chr8 (29-69)||(37141876-37141916)
chr8 (38-89)||(37600812-37600864)
chr8 (1-65)||(41541702-41541766)
[»] scaffold0045 (1 HSPs)
scaffold0045 (95-223)||(26879-27007)
[»] scaffold0003 (1 HSPs)
scaffold0003 (95-194)||(342720-342819)
[»] chr7 (41 HSPs)
chr7 (95-194)||(25857633-25857732)
chr7 (95-181)||(4836057-4836143)
chr7 (95-194)||(24379764-24379863)
chr7 (99-223)||(13466103-13466224)
chr7 (98-223)||(27341407-27341531)
chr7 (95-181)||(4843162-4843248)
chr7 (95-192)||(38994594-38994692)
chr7 (99-190)||(17845475-17845566)
chr7 (95-152)||(4603264-4603321)
chr7 (140-223)||(38994517-38994600)
chr7 (10-89)||(40741081-40741160)
chr7 (23-89)||(1324837-1324903)
chr7 (35-89)||(48610058-48610112)
chr7 (23-89)||(35128513-35128581)
chr7 (16-75)||(29723604-29723663)
chr7 (23-89)||(48767694-48767761)
chr7 (23-89)||(4089410-4089476)
chr7 (23-69)||(10685234-10685280)
chr7 (10-89)||(37136310-37136391)
chr7 (16-69)||(21388392-21388445)
chr7 (31-89)||(40211086-40211146)
chr7 (9-89)||(35960508-35960587)
chr7 (16-89)||(37673866-37673940)
chr7 (34-79)||(18121963-18122008)
chr7 (16-69)||(36726074-36726127)
chr7 (1-58)||(46688360-46688417)
chr7 (2-89)||(19477095-19477185)
chr7 (37-89)||(28663884-28663936)
chr7 (26-69)||(27162815-27162858)
chr7 (16-89)||(33181424-33181496)
chr7 (23-61)||(8318689-8318727)
chr7 (23-89)||(19235974-19236043)
chr7 (36-89)||(26632975-26633029)
chr7 (19-89)||(29993145-29993215)
chr7 (23-89)||(5333808-5333876)
chr7 (23-89)||(41672442-41672510)
chr7 (29-69)||(10593858-10593898)
chr7 (38-89)||(21759849-21759901)
chr7 (42-89)||(21809575-21809623)
chr7 (23-86)||(29635950-29636014)
chr7 (10-62)||(48832758-48832810)
[»] chr3 (52 HSPs)
chr3 (100-223)||(39298400-39298523)
chr3 (95-181)||(44783035-44783121)
chr3 (95-181)||(54980355-54980441)
chr3 (95-181)||(54967723-54967809)
chr3 (99-222)||(17645401-17645524)
chr3 (2-89)||(21933054-21933142)
chr3 (23-89)||(42891547-42891613)
chr3 (1-89)||(11388251-11388340)
chr3 (1-89)||(4979513-4979601)
chr3 (23-89)||(28477513-28477579)
chr3 (24-89)||(26999172-26999237)
chr3 (29-78)||(44698438-44698487)
chr3 (29-89)||(11140825-11140885)
chr3 (29-89)||(13084277-13084336)
chr3 (10-89)||(41739871-41739951)
chr3 (23-89)||(12077652-12077721)
chr3 (23-89)||(20945211-20945278)
chr3 (23-89)||(41727149-41727216)
chr3 (23-89)||(44083755-44083822)
chr3 (2-89)||(48309572-48309659)
chr3 (23-69)||(43187012-43187058)
chr3 (16-89)||(31474552-31474625)
chr3 (23-89)||(31531038-31531106)
chr3 (23-89)||(35145359-35145426)
chr3 (23-89)||(31819534-31819601)
chr3 (36-79)||(33288004-33288047)
chr3 (1-79)||(39932049-39932128)
chr3 (2-89)||(44338209-44338296)
chr3 (23-89)||(50524887-50524954)
chr3 (23-89)||(25750648-25750713)
chr3 (23-69)||(29645473-29645519)
chr3 (23-89)||(34055776-34055842)
chr3 (23-89)||(35055914-35055980)
chr3 (23-89)||(40645802-40645867)
chr3 (16-89)||(41308681-41308754)
chr3 (23-69)||(46048672-46048718)
chr3 (1-89)||(11396851-11396940)
chr3 (9-69)||(27047077-27047137)
chr3 (37-89)||(33411901-33411953)
chr3 (37-89)||(50363155-50363206)
chr3 (23-85)||(14645800-14645863)
chr3 (23-89)||(26043146-26043212)
chr3 (23-89)||(26517126-26517193)
chr3 (23-89)||(29349506-29349573)
chr3 (23-69)||(11345469-11345515)
chr3 (36-89)||(22659708-22659762)
chr3 (23-89)||(29676652-29676717)
chr3 (40-89)||(30476169-30476219)
chr3 (1-67)||(48901405-48901471)
chr3 (29-89)||(5504492-5504553)
chr3 (24-69)||(31650549-31650594)
chr3 (1-86)||(21864418-21864499)
[»] chr4 (53 HSPs)
chr4 (95-192)||(3346349-3346446)
chr4 (95-194)||(37287360-37287459)
chr4 (23-89)||(51787900-51787966)
chr4 (10-89)||(39414363-39414443)
chr4 (104-192)||(42683339-42683427)
chr4 (2-89)||(7002312-7002399)
chr4 (23-89)||(52552421-52552487)
chr4 (23-89)||(52198637-52198704)
chr4 (3-89)||(10541147-10541233)
chr4 (16-89)||(24072896-24072970)
chr4 (95-180)||(38394082-38394167)
chr4 (16-89)||(54359812-54359885)
chr4 (23-89)||(31840225-31840291)
chr4 (29-89)||(40411258-40411319)
chr4 (17-89)||(21171853-21171925)
chr4 (23-89)||(5536613-5536680)
chr4 (2-69)||(20016671-20016738)
chr4 (23-89)||(22651593-22651660)
chr4 (23-89)||(43800937-43801004)
chr4 (30-89)||(13096457-13096518)
chr4 (16-81)||(31486625-31486691)
chr4 (23-89)||(31917506-31917571)
chr4 (31-89)||(50782902-50782960)
chr4 (16-89)||(54701196-54701272)
chr4 (23-89)||(52226148-52226216)
chr4 (100-152)||(9757735-9757787)
chr4 (2-89)||(14602539-14602629)
chr4 (25-88)||(20116581-20116645)
chr4 (3-89)||(48609409-48609496)
chr4 (34-89)||(51918577-51918632)
chr4 (23-89)||(20262305-20262370)
chr4 (23-69)||(26203281-26203327)
chr4 (23-89)||(33246407-33246473)
chr4 (36-78)||(34543846-34543888)
chr4 (2-89)||(36513188-36513277)
chr4 (37-89)||(25477354-25477407)
chr4 (23-89)||(31937003-31937071)
chr4 (23-89)||(43509210-43509278)
chr4 (41-89)||(21473715-21473763)
chr4 (23-89)||(28116126-28116194)
chr4 (23-89)||(12624825-12624892)
chr4 (16-82)||(20291475-20291542)
chr4 (16-79)||(30153126-30153189)
chr4 (23-69)||(20792141-20792187)
chr4 (22-89)||(38136484-38136547)
chr4 (17-89)||(39237491-39237565)
chr4 (23-69)||(41945682-41945728)
chr4 (16-69)||(10602112-10602165)
chr4 (36-82)||(32107981-32108029)
chr4 (10-62)||(29744395-29744447)
chr4 (2-89)||(34643523-34643611)
chr4 (37-69)||(39196956-39196988)
chr4 (36-68)||(56216686-56216718)
[»] scaffold0479 (1 HSPs)
scaffold0479 (95-181)||(2338-2424)
[»] chr1 (44 HSPs)
chr1 (95-194)||(27641346-27641445)
chr1 (2-89)||(4813348-4813437)
chr1 (23-89)||(25269505-25269571)
chr1 (23-89)||(3831175-3831242)
chr1 (29-89)||(23982506-23982567)
chr1 (3-89)||(4082054-4082141)
chr1 (23-89)||(5084997-5085064)
chr1 (23-86)||(32047572-32047635)
chr1 (23-69)||(5321930-5321976)
chr1 (23-89)||(48721777-48721843)
chr1 (23-89)||(51390446-51390512)
chr1 (23-88)||(5852612-5852677)
chr1 (23-89)||(15512689-15512756)
chr1 (23-89)||(28948872-28948939)
chr1 (23-89)||(34696791-34696858)
chr1 (23-65)||(13723377-13723419)
chr1 (1-74)||(9380648-9380721)
chr1 (23-89)||(28334128-28334196)
chr1 (37-89)||(36085098-36085151)
chr1 (23-79)||(15911461-15911517)
chr1 (23-85)||(30898471-30898534)
chr1 (23-89)||(33231968-33232035)
chr1 (16-75)||(47643683-47643742)
chr1 (23-85)||(52141083-52141146)
chr1 (23-89)||(9684624-9684690)
chr1 (23-89)||(25063338-25063407)
chr1 (23-69)||(29302397-29302443)
chr1 (16-89)||(32715921-32715994)
chr1 (23-89)||(28723558-28723626)
chr1 (41-89)||(17426652-17426700)
chr1 (9-65)||(20564930-20564986)
chr1 (37-89)||(34012615-34012667)
chr1 (10-45)||(10842494-10842529)
chr1 (31-78)||(34102503-34102550)
chr1 (43-89)||(32152286-32152332)
chr1 (23-69)||(44163372-44163417)
chr1 (37-89)||(8877900-8877953)
chr1 (33-89)||(13145546-13145603)
chr1 (23-75)||(49033815-49033868)
chr1 (41-89)||(3072265-3072313)
chr1 (23-89)||(10160840-10160907)
chr1 (1-89)||(15457702-15457790)
chr1 (37-89)||(25258459-25258511)
chr1 (41-77)||(32321895-32321931)
[»] chr5 (38 HSPs)
chr5 (122-223)||(16698118-16698218)
chr5 (10-89)||(7736109-7736189)
chr5 (95-152)||(22764066-22764123)
chr5 (2-69)||(34676272-34676339)
chr5 (3-69)||(20946237-20946303)
chr5 (23-90)||(27925401-27925469)
chr5 (3-75)||(23647995-23648067)
chr5 (3-75)||(23810506-23810578)
chr5 (3-62)||(4745286-4745345)
chr5 (23-89)||(39690394-39690461)
chr5 (23-89)||(3631026-3631092)
chr5 (23-69)||(7510689-7510735)
chr5 (16-89)||(27642631-27642705)
chr5 (9-79)||(32068126-32068196)
chr5 (29-90)||(35568919-35568981)
chr5 (23-89)||(18729721-18729789)
chr5 (1-80)||(9375526-9375605)
chr5 (37-89)||(10934135-10934187)
chr5 (23-89)||(21912249-21912316)
chr5 (23-70)||(36750684-36750731)
chr5 (23-89)||(38972035-38972102)
chr5 (23-65)||(731857-731899)
chr5 (23-69)||(3558935-3558981)
chr5 (38-89)||(15967006-15967058)
chr5 (10-89)||(14044394-14044473)
chr5 (23-79)||(15898370-15898428)
chr5 (36-89)||(8717880-8717934)
chr5 (23-69)||(20975713-20975759)
chr5 (37-78)||(33862796-33862838)
chr5 (36-89)||(36347522-36347576)
chr5 (24-69)||(3247181-3247226)
chr5 (16-89)||(43454111-43454184)
chr5 (42-86)||(4738762-4738806)
chr5 (16-89)||(4857394-4857469)
chr5 (30-62)||(6173305-6173337)
chr5 (36-89)||(9946278-9946333)
chr5 (37-69)||(24780907-24780939)
chr5 (57-89)||(39042551-39042583)
[»] chr6 (23 HSPs)
chr6 (16-89)||(16327253-16327327)
chr6 (16-89)||(16350651-16350725)
chr6 (3-68)||(12514469-12514534)
chr6 (9-89)||(33607484-33607563)
chr6 (23-89)||(28238224-28238290)
chr6 (23-89)||(30248991-30249057)
chr6 (16-89)||(31945815-31945889)
chr6 (23-89)||(34513129-34513195)
chr6 (3-85)||(12802790-12802870)
chr6 (23-89)||(19839060-19839127)
chr6 (3-65)||(31780280-31780342)
chr6 (16-69)||(6791526-6791579)
chr6 (9-69)||(8644688-8644748)
chr6 (11-89)||(3887840-3887919)
chr6 (27-89)||(5895860-5895923)
chr6 (2-89)||(11082514-11082600)
chr6 (3-89)||(12503498-12503587)
chr6 (23-79)||(16186708-16186766)
chr6 (16-89)||(1763942-1764016)
chr6 (2-79)||(31486951-31487029)
chr6 (29-69)||(31536163-31536203)
chr6 (22-69)||(30465877-30465924)
chr6 (41-89)||(31062456-31062503)
[»] scaffold0038 (1 HSPs)
scaffold0038 (23-89)||(38386-38452)
[»] scaffold0013 (1 HSPs)
scaffold0013 (23-89)||(49266-49332)
[»] scaffold1091 (1 HSPs)
scaffold1091 (29-89)||(1828-1889)
[»] scaffold0009 (1 HSPs)
scaffold0009 (23-89)||(25827-25895)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-89)||(214749-214839)
[»] scaffold0182 (1 HSPs)
scaffold0182 (38-89)||(22557-22610)
[»] scaffold0166 (1 HSPs)
scaffold0166 (37-69)||(23290-23322)
[»] scaffold0121 (1 HSPs)
scaffold0121 (38-89)||(24188-24240)
[»] scaffold0067 (1 HSPs)
scaffold0067 (23-75)||(36146-36198)


Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 37037460 - 37037654
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaacccctttt-caaattactagatacatttattattttttcttaaacatatccctaattagctagataca 99  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37037460 tatttgagtaaaaatttgtctataaatataaacccctttttcaaattactagatacatttattattttttcttaaacatatcccttattagctagataca 37037559  T
Q  100 tttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgc 194  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37037560 tttgacaaaatgaaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgc 37037654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 34330203 - 34330131
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  34330203 ttgtctataaatgtaaactccttttcaaattactagatgcatttatt-ttttttcctaaacatatccctgatta 34330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 37355240 - 37355165
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatt--ttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||  ||||| |||||||| || ||||||    
T  37355240 ttgtctctaaatataaaccccttttcaaattactagatgcatttattatttattttcctaaacatacccttaatta 37355165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 7278522 - 7278589
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| |||| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  7278522 taaatgtaaatcccttttcaaattactagatgcatttattattattttcttaaacatacccctaatta 7278589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 8064982 - 8065048
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||||| |||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  8064982 taaatgtaaaccccctttcaaattactagatacatttattcatttttcctaaacatacccctaatta 8065048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 14528121 - 14528035
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||| ||||||||||    ||||||| |||||| |||||||||||||||||||||||||| ||| |||||||    
T  14528121 tttgattaaaaatttgtctttaaatataaatattttttcaagttactatatacatttattattttttcttaaacacatctctaatta 14528035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 31644352 - 31644418
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  31644352 taaatgtaaactcattttcaaattactagatgcatttattattttttcctaaacatacccctaatta 31644418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 8393425 - 8393365
Alignment:
Q  9 taaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||||||| ||  ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  8393425 taaaaaattatccctaaatataaacccattttcaaattacaagatacatttattatttttt 8393365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 15577969 - 15578029
Alignment:
Q  9 taaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||||||| || |||||||||||| | |||||||||||| ||||||||||||||||||||    
T  15577969 taaaaaattatccataaatataaacacattttcaaattacaagatacatttattatttttt 15578029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 45214906 - 45214854
Alignment:
Q  38 tttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  45214906 tttcaaattactagatacatttattatttttttcttaaacatacccctaatta 45214854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 1246321 - 1246388
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||||||||| ||||||||||||||| |||||||||||||| ||||  |||||||| |||||||||    
T  1246321 taaatataaaccacttttcaaattactaaatacatttattattatttttctaaacatacccctaatta 1246388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 17663820 - 17663753
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  17663820 taaatgtaaactccttttcaaattactagatgcatttattattattttcctaaacatacccctaatta 17663753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 20362178 - 20362111
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  20362178 taaatgtaaactccttttcaaattactagatgcatttattattattttcctaaacatacccctaatta 20362111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 27297773 - 27297706
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||    
T  27297773 taaatgtaaactccttttcaaattagtagatgcatttattatttttttcctaaacatatccctaatta 27297706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 44101563 - 44101501
Alignment:
Q  26 atataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||||||| |||||||||||| ||||||||| |||| ||||||||||| ||||||||    
T  44101563 atataaaccccttttaaaattactagatgcatttatta-ttttacttaaacatatacctaatta 44101501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 40345985 - 40346031
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  40345985 taaatgtaaactccttttcaaattactagatacatttattatttttt 40346031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 44424789 - 44424724
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||||| ||||||||||||||||| |||||||| ||||||| |||||||| |||||||||    
T  44424789 taaatgtaaaccctttttcaaattactagatgcatttatt-ttttttcctaaacatacccctaatta 44424724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 15851728 - 15851660
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||  |||||| |||||||| |||||||||    
T  15851728 taaatgtaaactccttttcaaattactagatgcatttattattatttttcctaaacatacccctaatta 15851660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 35179035 - 35178982
Alignment:
Q  36 cttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||||||| | ||||||||||||||||| |||||||| |||||||||    
T  35179035 cttttcaaattactaaacacatttattattttttcctaaacatacccctaatta 35178982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 44274427 - 44274495
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt--cttaaacatatccctaatta 89  Q
    ||||| |||| ||||||||||||||||| || |||||||||||||||  |||||||||| |||||||||    
T  44274427 taaatgtaaatcccttttcaaattactaaatgcatttattatttttttccttaaacatacccctaatta 44274495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 7255795 - 7255730
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||||||||||  ||||||||||||||||  |||||||||| ||||| ||||||||||||||||||    
T  7255795 taaatataaaccc--tttcaaattactagatgtatttattattattttcctaaacatatccctaatta 7255730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 36174720 - 36174768
Alignment:
Q  41 caaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||||  |||||||||||||||||||||||| |||||||||    
T  36174720 caaattactagatgaatttattattttttcttaaacatacccctaatta 36174768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 36846972 - 36846912
Alignment:
Q  9 taaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||||||| ||  ||||||||||||| |||||||||| | ||||||||||||||||||||    
T  36846972 taaaaaattatccctaaatataaacccattttcaaatttccagatacatttattatttttt 36846912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43119253 - 43119321
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||||| |||||| |||||  |||||||||| | ||||||||||||||||||  ||||||||||||||    
T  43119253 tatttgactaaaaatttgtccctaaatataaatctcttttcaaattactagatgtatttattatttttt 43119321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11121428 - 11121361
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttt 68  Q
    ||||||| ||||||||| ||| |||||||||| || ||||||||||| |||||  |||||||||||||    
T  11121428 tatttgactaaaaaattatctctaaatataaatccgttttcaaattattagatttatttattattttt 11121361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 27749663 - 27749596
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||| |||||||||||||| |||| ||||||||| ||||||| |||||||| |||||||||    
T  27749663 taaatgtaaactccttttcaaattacaagatgcatttattacttttttcctaaacatacccctaatta 27749596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 28734019 - 28733952
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| |||||| ||||||||||||||| || ||||||||||| ||||| |||||||| |||||||||    
T  28734019 taaatctaaacctcttttcaaattactatatgcatttattattgttttcctaaacatacccctaatta 28733952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 38449623 - 38449690
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||| ||||||||| ||| ||||| ||||||| |||||||| |||||||||    
T  38449623 taaatgtaaaccccttttcaacttactagatgcatatattatttttttcctaaacatacccctaatta 38449690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 45150651 - 45150709
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacata 79  Q
    ||||| ||||| |||||||||||| |||||||||||||||||  |||||||||||||||    
T  45150651 taaatgtaaactccttttcaaattgctagatacatttattattatttttcttaaacata 45150709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 28037907 - 28037833
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaac 76  Q
    |||||| |||||| ||||| ||||||||||| |  |||| |||||||||||| | ||||||||||||||| ||||    
T  28037907 atttgattaaaaatttgtccataaatataaatctattttgaaattactagatgcgtttattattttttctcaaac 28037833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 4124938 - 4124893
Alignment:
Q  14 aattgtctataaatataaaccccttttcaaattactagatacattt 59  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||    
T  4124938 aattgtctctaaatataagccccatttcaaattactagatacattt 4124893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 41865911 - 41865846
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaat 87  Q
    ||||| ||||| ||||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||    
T  41865911 taaatgtaaacaccttttcaaattattagatgcatttattatttttttcctaaacatacccctaat 41865846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 13534586 - 13534534
Alignment:
Q  38 tttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    |||||||||||||||| | ||||||| ||||||| ||||||||||||||||||    
T  13534586 tttcaaattactagatgcgtttattaattttttcctaaacatatccctaatta 13534534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 534661 - 534594
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacattta-ttattttttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||||||||||||||| |||||| || ||||||| |||| ||| |||||||||    
T  534661 taaatgtaaacctcttttcaaattactagatgcatttattttttttttcctaaatatacccctaatta 534594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 2048753 - 2048804
Alignment:
Q  37 ttttcaaattactagatacatttatta-ttttttcttaaacatatccctaat 87  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||| |||||||    
T  2048753 ttttcaaattattagatgcatttattatttttttcttaaacatacccctaat 2048804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 11071865 - 11071796
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttat---tattttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| |||||||   ||||||||| |||||||  |||||||||    
T  11071865 taaatctaaactccttttcaaattactagatgcatttattattattttttcctaaacatgcccctaatta 11071796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 25731107 - 25731162
Alignment:
Q  34 cccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||| |  ||||||| |||||||| |||||||| |||||||||    
T  25731107 cccttttcaaattactataaccatttataattttttcctaaacatacccctaatta 25731162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 28264868 - 28264930
Alignment:
Q  29 taaaccccttttcaaattactagatacatttatta--ttttttcttaaacatatccctaatta 89  Q
    |||||| |||||||||||||||||| |||||||||   |||||| |||||||| |||||||||    
T  28264868 taaacctcttttcaaattactagatgcatttattaatatttttcctaaacatacccctaatta 28264930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 32677658 - 32677604
Alignment:
Q  37 ttttcaaattactagatacatttatta--ttttttcttaaacatatccctaatta 89  Q
    |||||||||||||||||||||||||||  ||||||  |||||||| |||||||||    
T  32677658 ttttcaaattactagatacatttattatgtttttttctaaacatacccctaatta 32677604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 38107700 - 38107633
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||| ||| ||| ||||||||||||| |||| ||||||||||| ||||| |||||||| |||||||||    
T  38107700 taaacatacacctcttttcaaattacaagatgcatttattattattttcctaaacatacccctaatta 38107633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 2131952 - 2131886
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||| |||||||||||||||  |||| || ||  |||||||||||| |||||||||    
T  2131952 taaatgtaaacccctattcaaattactagatgtatttttttttccttcttaaacatacccctaatta 2131886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 2521222 - 2521276
Alignment:
Q  36 cttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||||||||| |||||| ||||||||||| ||||| |||||||| |||||||||    
T  2521222 cttttcaaattgctagatgcatttattattattttcctaaacatacccctaatta 2521276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 38981980 - 38982045
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||||| |||| |||||| ||||| |||||||||||||||| || ||||| |||||||||    
T  38981980 taaatctaaacccatttttaaattattagatgcatttattattttttc-tatacatacccctaatta 38982045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 44421936 - 44421862
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacattta-ttattttttcttaaacatatccctaatta 89  Q
    |||||| ||||| |||||||||||  |||||| ||||| |||||| || ||||||| ||||||||||| ||||||    
T  44421936 ttgtctctaaatgtaaacccctttctaaattattagatgcatttattttttttttcctaaacatatccttaatta 44421862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 16808716 - 16808773
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacattt 59  Q
    |||||| ||||||||||||| |||||||  || | ||||||||||||||||| |||||    
T  16808716 atttgattaaaaaattgtctctaaatatgtactcattttcaaattactagatgcattt 16808773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 16847997 - 16848054
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacattt 59  Q
    |||||| ||||||||||||| |||||||  || | ||||||||||||||||| |||||    
T  16847997 atttgattaaaaaattgtctctaaatatgtactcattttcaaattactagatgcattt 16848054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 17250862 - 17250915
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| ||||| ||||| |||||| ||||||||| || |||||||||||||||    
T  17250862 ttgtctctaaatgtaaactcctttttaaattactatatgcatttattatttttt 17250915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 4398493 - 4398549
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacata 79  Q
    ||||| ||||||| ||||||||||||||||| |||||||| | ||||  ||||||||    
T  4398493 taaatgtaaaccctttttcaaattactagatgcatttattttatttttctaaacata 4398549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 14420872 - 14420828
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttt 67  Q
    ||||| |||||| ||||||| |||||||||| |||||||||||||    
T  14420872 taaatgtaaacctcttttcagattactagatgcatttattatttt 14420828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 29971441 - 29971389
Alignment:
Q  37 ttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||| |||||  ||||||||||||||| |||||||| || ||||||    
T  29971441 ttttcaaattattagatgtatttattattttttcctaaacatacccttaatta 29971389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 18951721 - 18951623
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatg 193  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  18951721 atacatttgacaaaatggaaggttgcatgtgatgaaaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtgacacatgttgtggtgcatg 18951623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 36167218 - 36167308
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgt 185  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  36167218 atacatttgacaagatggaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtaacacatgttgt 36167308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 41481219 - 41481309
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgt 185  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  41481219 atacatttgacaagatggaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtaacacatgttgt 41481309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 18965857 - 18965952
Alignment:
Q  99 atttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgc 194  Q
    |||||||||||||||| || | |||||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  18965857 atttgacaaaatggaacgtagtatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtgacacatgttttggtgcatgc 18965952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 31746316 - 31746382
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  31746316 taaatgtaaaccccttttcaaattactagatacatttattattttttcctaaacatacccctaatta 31746382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 10396142 - 10396207
Alignment:
Q  25 aatataaaccccttttcaaattactagatacattta-ttattttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  10396142 aatataaaccccttttcaaattactagatgcatttatttattttttcctaaacatatccctaatta 10396207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 7772707 - 7772641
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||  ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  7772707 taaatataaacatcttttcaaattactagatgtatttattattttttcctaaacatatccctaatta 7772641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 38202895 - 38202969
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||    
T  38202895 ttgtctctacatataaaccccttttcaaattactagatgcatttattatttttttcttaaatatacccctaatta 38202969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 1177058 - 1177133
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttatta--ttttttcttaaacatatccctaatta 89  Q
    |||||| |||||||||||||||||| |||||||||||| |||||||||  ||||||| |||||||| |||||||||    
T  1177058 ttgtctctaaatataaacccctttttaaattactagatgcatttattattttttttcctaaacatacccctaatta 1177133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 5191459 - 5191527
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaattag 90  Q
    ||||| ||||||||||||||||||||||||| |||||| || |||||||||||||||| ||||||||||    
T  5191459 taaatgtaaaccccttttcaaattactagatgcatttaatatttttttcttaaacatacccctaattag 5191527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 22590592 - 22590504
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||| |||||| |||||  |||||||||||| |||||||||||||||||| ||||||||||| ||| ||| |||||| |||||||||    
T  22590592 atttgaataaaaatttgtccctaaatataaacctcttttcaaattactagatccatttattattatttccttgaacatacccctaatta 22590504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 45203974 - 45203887
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| |||||| ||||||  ||||||||||||||||  |||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  45203974 tttgactaaaaatttgtcttgaaatataaacccctttataaattactagatgcatttattattattttcctaaacatacccctaatta 45203887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 31252565 - 31252631
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatt 88  Q
    ||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  31252565 taaatgtaaacctcttttcaaattactagatgcatttattattattttcttaaacatacccctaatt 31252631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 38761272 - 38761335
Alignment:
Q  29 taaaccccttttcaaattactagatacatttatta-ttttttct--taaacatatccctaatta 89  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||    
T  38761272 taaaccccttttcaaattactagatgcatttattatttttttcttctaaacatatccctaatta 38761335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 38770100 - 38770164
Alignment:
Q  26 atataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||||| |||| |||||||||||||    
T  38770100 atataaaccccttttcaaattactaaatatatttattatttttttcctaaatatatccctaatta 38770164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 57098 - 57165
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||| |||||||| || ||||||    
T  57098 taaatgtaaaccccttttcaaattactagatgcatttattatttttttcctaaacatacccttaatta 57165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 7172406 - 7172359
Alignment:
Q  31 aaccccttttcaaattactagatacatttattattttttcttaaacat 78  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  7172406 aaccccttttcaaattactagatgcatttattattttttcataaacat 7172359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 24962275 - 24962342
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  24962275 taaatgtaaactccttttcaaattactagatgcatttattattattttcctaaacatacccctaatta 24962342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 43980493 - 43980560
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  43980493 taaatgtaaactccttttcaaattactagatgcatttattattattttcctaaacatacccctaatta 43980560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 1769359 - 1769425
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||| | |||||||||| ||||| ||||||||||||||||||||||||| || ||||||    
T  1769359 taaatgtaaacctcatttcaaattattagatgcatttattattttttcttaaacatacccttaatta 1769425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 35794986 - 35794930
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacattt 59  Q
    ||||| |||||| |||||| |||||||||| || |||||||||||||||||||||||    
T  35794986 tttgattaaaaatttgtctttaaatataaatccattttcaaattactagatacattt 35794930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 45183765 - 45183837
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattattttttct-taaacatatccctaat 87  Q
    |||||| ||||| ||||| |||||| |||||||||||| ||||||||||||||| | |||||||| |||||||    
T  45183765 ttgtctctaaatgtaaactcctttttaaattactagatgcatttattattttttttctaaacatacccctaat 45183837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 45283411 - 45283463
Alignment:
Q  37 ttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||    
T  45283411 ttttcaaattattagatacgtttattaatttttcctaaacatatccctaatta 45283463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 885656 - 885609
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttc 70  Q
    ||||| |||||||||||||||||||||||||  |||||||||||||||    
T  885656 taaatttaaaccccttttcaaattactagatgaatttattattttttc 885609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 36437719 - 36437652
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| |||||| |||||  |||||||||||   ||||||||||||||||| |||||||||||||||    
T  36437719 atttgactaaaaatttgtccttaaatataaactaattttcaaattactagatgcatttattatttttt 36437652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 40517936 - 40517869
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||||    
T  40517936 taaatgtaaactccttttcaaattattagatccatttattatttttttcctaaacatacccctaatta 40517869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 14907337 - 14907262
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||  ||||||||||  |||||||||||||||||| ||||||    |||||||||||||||| || ||||||    
T  14907337 aaaaaattgtccctaaatataaaatccttttcaaattactagacacattt----ttttttcttaaacatacccttaatta 14907262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 25198472 - 25198418
Alignment:
Q  36 cttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  25198472 cttttcaaattactagatgcatttattattattttcctaaacatacccctaatta 25198418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 30511574 - 30511612
Alignment:
Q  24 aaatataaaccccttttcaaattactagatacatttatt 62  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  30511574 aaatataaaccacttttcaaattactagatacatttatt 30511612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 14522264 - 14522321
Alignment:
Q  33 ccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||||||| || ||||||    
T  14522264 ccccttttcaaattactagatgcatttattatttttttcctaaacatacccttaatta 14522321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 14577560 - 14577629
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta----ttttttcttaaacatatccctaatta 89  Q
    ||||||||||| |||||| |||||||||||| |||||||||    ||||||||| ||||||||||||||||    
T  14577560 taaatataaactcctttttaaattactagatgcatttattaatatttttttctt-aacatatccctaatta 14577629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 17933899 - 17933854
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttt 68  Q
    |||||||| | || ||||||||||||||||||||||||||||||||    
T  17933899 taaatatacatcctttttcaaattactagatacatttattattttt 17933854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 31673787 - 31673726
Alignment:
Q  29 taaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||||| |||||||||||| |||||||||||||||| ||||| |||||||| || ||||||    
T  31673787 taaaccctttttcaaattacaagatacatttattattcttttcctaaacatacccttaatta 31673726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 36309485 - 36309573
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||| |||||||||| | ||||| |||||  ||||| ||||||||||  |||||| |||||||| |||||||||    
T  36309485 tttgattaaaaatttgtctctaaatataaatctctttttaaattcttagatgcatttattattatttttcctaaacataaccctaatta 36309573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 4273876 - 4273943
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttct-taaacatatccctaatta 89  Q
    ||||| |||||  |||||||||||||||||| ||||||||||||||| | |||||||| || ||||||    
T  4273876 taaatgtaaacttcttttcaaattactagatgcatttattattttttttctaaacatacccttaatta 4273943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 12894089 - 12894156
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| |||||| |||||| |||||||||| | |||||||||||| |||||  ||||||| ||||||    
T  12894089 atttgactaaaaatttgtctctaaatataaatctcttttcaaattagtagatgaatttattgtttttt 12894156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 38773258 - 38773325
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||||||||| ||||| ||||||||| ||||||| |||||||| | |||||||    
T  38773258 taaatttaaacctcttttcaaattattagatgcatttattatttttttcctaaacatacctctaatta 38773325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 40601950 - 40601992
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt 65  Q
    ||||| |||||| |||||||||||||||||| |||||||||||    
T  40601950 taaatgtaaacctcttttcaaattactagatgcatttattatt 40601992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 24512076 - 24512144
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt--ttttcttaaacatatccctaatta 89  Q
    ||||| |||| || ||||||||||  ||||| |||||||||||  |||||||||||||| |||||||||    
T  24512076 taaatgtaaatcctttttcaaattcttagatgcatttattattatttttcttaaacatacccctaatta 24512144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 30262443 - 30262515
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||| || | ||||||||||||||| || ||||||||||||  |||||||  |||||||||    
T  30262443 ttgtccataaatataaatccttattcaaattactagatgca-ttattatttttttctaaacatgcccctaatta 30262515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 5393427 - 5393479
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaattactagatacatttatt 62  Q
    |||||| ||||  ||||||||| ||| |||||||||||| |||||||||||||    
T  5393427 aaaaaactgtccctaaatataagcccattttcaaattacaagatacatttatt 5393479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 10709495 - 10709443
Alignment:
Q  37 ttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||| ||||| | ||||||| |||||  ||||||||||||||||||    
T  10709495 ttttcaaattattagatgcttttattaattttttataaacatatccctaatta 10709443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 11444141 - 11444109
Alignment:
Q  38 tttcaaattactagatacatttattattttttc 70  Q
    |||||||||||||||| ||||||||||||||||    
T  11444141 tttcaaattactagatgcatttattattttttc 11444109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 12763027 - 12762971
Alignment:
Q  34 cccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||||||| ||||||||||| ||||| |||| ||| |||||||||    
T  12763027 ccctttccaaattactagatgcatttattatttttttcctaaagatacccctaatta 12762971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 25185236 - 25185159
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttatta----ttttttcttaaacatatccctaatta 89  Q
    ||||| |||||| ||||| ||||||||||||||||||| ||||  |||    ||||||| |||||||| |||||||||    
T  25185236 ttgtccataaatgtaaacaccttttcaaattactagatgcattatttatcttttttttcctaaacatacccctaatta 25185159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 34127343 - 34127402
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttatt 62  Q
    |||||| |||||| |||||  ||||||||| || ||||||| |||||||||||||||||||    
T  34127343 atttgactaaaaatttgtcc-taaatataagcctcttttcatattactagatacatttatt 34127402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 34882887 - 34882799
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||| || || |||||||| || |||| ||||||||| ||  |||||||||| ||||| ||||||||| | ||||||    
T  34882887 atttgattaaaaaattatccattaatataaatccttttttaaattactatatttatttattatttttttcctaaacatattcttaatta 34882799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 37141916 - 37141876
Alignment:
Q  29 taaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||||| |||||| |||||||||| |||||||||||||||    
T  37141916 taaaccctttttcacattactagatgcatttattatttttt 37141876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 37600812 - 37600864
Alignment:
Q  38 tttcaaattactagatacatttattattttttct-taaacatatccctaatta 89  Q
    |||||||||| ||||| ||||||||||||||| | |||||||| |||||||||    
T  37600812 tttcaaattattagatgcatttattattttttttctaaacatacccctaatta 37600864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41541766 - 41541702
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt 65  Q
    ||||||| ||||||||| ||  ||||| ||||| | ||||||| |||| ||||||||||||||||    
T  41541766 tatttgactaaaaaattctccttaaatgtaaactcattttcaagttaccagatacatttattatt 41541702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 95 - 223
Target Start/End: Complemental strand, 27007 - 26879
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgc 194  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||| ||||| |||| || ||||||     
T  27007 atacatttgacaaaatgaaaggttgcatgtgatgacaagtagcaaggtgtatggtgtacaaatagtgtagtgtatgagtaacacgtgttatgatgcatgt 26908  T
Q  195 gttgcaaatgatacatggtgtggtgcatg 223  Q
     ||||||  ||||||||||||||||||||    
T  26907 attgcaagagatacatggtgtggtgcatg 26879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 342819 - 342720
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgc 194  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||  |||  |||||||||||||||    
T  342819 atacatttgacaaaatggaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtgacatttgttgtggtgcatgc 342720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 25857732 - 25857633
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgc 194  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||  |||  |||||||||||||||    
T  25857732 atacatttgacaaaatggaaggttgcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtgacatgtgttgtggtgcatgc 25857633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 4836143 - 4836057
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatg 181  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  4836143 atacatttgacaagatggaaggttgcatgtgatgacaagtagcaaggtgcatggtgtacacatggtgtagtgtatgagtaacacatg 4836057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 24379863 - 24379764
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgc 194  Q
    |||||||||||||||||||||||||||| |||| ||||| || ||| |||||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  24379863 atacatttgacaaaatggaaggttgcatctgataacaagcagcaagatgcatggtgtacacatggtgtagtgtatgagtgacatatgttgtggtgcatgc 24379764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 223
Target Start/End: Complemental strand, 13466224 - 13466103
Alignment:
Q  99 atttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgcgttg 198  Q
    |||||||||||| |||||||||||||||| ||   |||||||||| |||||||||| |||||||| |||||||| |||||||||||||||| | || |||    
T  13466224 atttgacaaaatagaaggttgcatgtgataac---tagtaaggtgtatggtgtacatatggtgtaatgtatgagtaacacatgttgtggtgtacgcattg 13466128  T
Q  199 caaatgatacatggtgtggtgcatg 223  Q
    ||| ||| |||||||||||||||||    
T  13466127 caagtgacacatggtgtggtgcatg 13466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 27341531 - 27341407
Alignment:
Q  98 catttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgcgtt 197  Q
    |||||||||||| |||| |||||| | |||||||||||| |||| ||||||||||||||||||||||| ||||||  || ||||||||||||||||| ||    
T  27341531 catttgacaaaagggaaagttgcacgagatgacaagtagcaaggggcatggtgtacacatggtgtagtatatgagttac-catgttgtggtgcatgcatt 27341433  T
Q  198 gcaaatgatacatggtgtggtgcatg 223  Q
    ||||  || |||||||||||||||||    
T  27341432 gcaagagacacatggtgtggtgcatg 27341407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 4843248 - 4843162
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatg 181  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  4843248 atacatttggcaagatggaaggttgcatgtgatgagaagtagcaaggtgcattgtgtacacatggtgtagtgtatgagtaacacatg 4843162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 38994692 - 38994594
Alignment:
Q  95 atacatttgacaaaa-tggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcat 192  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||  |||||||||  |||||||||||| |||||||||||||||||||    
T  38994692 atacatttgacaaaaatggaatgttgcatgtgatgacaagtagcaaggtgcatgaagtacacatgaagtagtgtatgagtaacacatgttgtggtgcat 38994594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 17845475 - 17845566
Alignment:
Q  99 atttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgc 190  Q
    |||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||| ||||    
T  17845475 atttgataaaatagaaggttgcatgtgaagacaagtaataaggtgcatggtgtacacatggtatggtgtatgagtaacacatgttgtagtgc 17845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 4603264 - 4603321
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgta 152  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  4603264 atacatttgacaaaatggaaggttgcatgtgatgacaagtagcaagatgcatggtgta 4603321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 38994600 - 38994517
Alignment:
Q  140 ggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgcgttgcaaatgatacatggtgtggtgcatg 223  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||||||||||   || |||| || |||||||||||||||||    
T  38994600 ggtgcatagtgtacacatgatgtagtgtatgagtaacacatgttgtggtgcatatattacaaaagacacatggtgtggtgcatg 38994517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 40741160 - 40741081
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||   |||||||||||||||||| |||||||||||  |||||||||||||||| |||||||| |||||||||    
T  40741160 aaaaaattgttcctaaatataaaccccttttaaaattactagacgcatttattattttttcctaaacatacccctaatta 40741081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 1324903 - 1324837
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||||| ||||||||||||||||  ||||||||||||||| |||||||| |||||||||    
T  1324903 taaatgtaaaccccctttcaaattactagatgaatttattattttttcctaaacatacccctaatta 1324837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 89
Target Start/End: Original strand, 48610058 - 48610112
Alignment:
Q  35 ccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  48610058 ccttttcaaattactagatgcatttattatttttttctaaacatatccctaatta 48610112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 35128581 - 35128513
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt--ttttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||||||||||||||| |||||||||||  |||||||||||||| |||||||||    
T  35128581 taaatgtaaacctcttttcaaattactagatgcatttattattttttttcttaaacatacccctaatta 35128513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 29723663 - 29723604
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaa 75  Q
    |||||| |||||||||| || |||| |||||||||||| |||||||||||||||||||||    
T  29723663 ttgtctttaaatataaatccatttttaaattactagatgcatttattattttttcttaaa 29723604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 48767761 - 48767694
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacattta-ttattttttcttaaacatatccctaatta 89  Q
    ||||| |||||||| |||||||||||||||| |||||| |||||||||| |||||||| |||||||||    
T  48767761 taaatgtaaaccccctttcaaattactagatgcatttatttattttttcctaaacatacccctaatta 48767694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 4089410 - 4089476
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||| | |||| |||||||||||| |||||||||||||||| |||||||| |||||||||    
T  4089410 taaatgtaaactctttttaaaattactagatgcatttattattttttcctaaacatacccctaatta 4089476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 10685280 - 10685234
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  10685280 taaatgtaaaccccttttcaaattactagatgcatttattatttttt 10685234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 37136391 - 37136310
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    |||||||||||  |||||||||||| |||||||||||||||||  |||| |||||  |||||| |||||||| |||||||||    
T  37136391 aaaaaattgtccctaaatataaacctcttttcaaattactagacgcattcattattatttttcctaaacatacccctaatta 37136310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 21388445 - 21388392
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| ||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  21388445 ttgtctctaaatgtaaacccctttccaaattactagatgcatttattatttttt 21388392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 40211086 - 40211146
Alignment:
Q  31 aaccccttttcaaattactagatacatttatta--ttttttcttaaacatatccctaatta 89  Q
    |||||||||||||||||||||||  ||||||||  ||||||| ||||||||||||||||||    
T  40211086 aaccccttttcaaattactagatgtatttattattttttttcctaaacatatccctaatta 40211146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 35960587 - 35960508
Alignment:
Q  9 taaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||| |||||| ||||||||||| | |||| | |||| ||||| |||||||||||||||| |||||||| |||||||||    
T  35960587 taaaaatttgtct-taaatataaactcatttttagattagtagatgcatttattattttttcataaacatacccctaatta 35960508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 37673940 - 37673866
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||| ||||| ||||| |||||| ||||||||||||  |||||||||| |||||||||||||  |||||||||    
T  37673940 ttgtctctaaatgtaaactcctttttaaattactagatgtatttattatttttttcttaaacatgcccctaatta 37673866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 18121963 - 18122008
Alignment:
Q  34 cccttttcaaattactagatacatttattattttttcttaaacata 79  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||    
T  18121963 ccctttttaaattactagatgcatttattattttttcctaaacata 18122008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 36726074 - 36726127
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| ||||| |||||||  |||||||||||||||| |||||||||||||||    
T  36726074 ttgtctctaaatgtaaacccactttcaaattactagatgcatttattatttttt 36726127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46688360 - 46688417
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatt 58  Q
    ||||||| |||||| |||||  ||||||||| || |||||||||||||||||||||||    
T  46688360 tatttgactaaaaatttgtccctaaatataagccacttttcaaattactagatacatt 46688417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 19477095 - 19477185
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttatta---ttttttcttaaacatatccctaatta 89  Q
    |||||| |||||  |||||| ||||||||||   ||||||| |||||||||| |||||||||   ||||||| |||| |||||||||||||    
T  19477095 atttgactaaaagtttgtctctaaatataaatttcttttcagattactagattcatttattattgttttttcctaaatatatccctaatta 19477185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 28663936 - 28663884
Alignment:
Q  37 ttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||| |||||||||||| ||||||| |||||||| |||||||| |||||||||    
T  28663936 tttttaaattactagatgcatttatgattttttcctaaacatacccctaatta 28663884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 27162815 - 27162858
Alignment:
Q  26 atataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||||| |||||||||||||||| || |||||||||||||||    
T  27162815 atataaacaccttttcaaattactaaatgcatttattatttttt 27162858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 33181496 - 33181424
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||||  |||||||||| ||||| ||||||||| ||||||||||||||||  ||||||||    
T  33181496 ttgtccataaatgtaaaccc--tttcaaattattagatgcatttattaattttttcttaaacatactcctaatta 33181424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 8318727 - 8318689
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttat 61  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  8318727 taaatgtaaaccccttttcaaattactagatgcatttat 8318689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 19235974 - 19236043
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacattta-ttatt--ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| |||||| |||||  ||||| |||||||| |||||||||    
T  19235974 taaatgtaaactccttttcaaattactagatgcatttatttatttattttcctaaacatacccctaatta 19236043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 26633029 - 26632975
Alignment:
Q  36 cttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||||||||||||||| |||||||||||  |||| |||||||| |||||||||    
T  26633029 cttttcaaattactagatgcatttattattactttcctaaacatacccctaatta 26632975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 29993215 - 29993145
Alignment:
Q  19 tctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||||||   |||| ||| |||||||| ||||||||||| |||| |||||||| | |||||||    
T  29993215 tctataaatataaacttatttttaaaatactagatgcatttattattatttcctaaacataccactaatta 29993145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 5333808 - 5333876
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttat--tattttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||||| ||||||||||||  ||||||  | ||||||| |||||||| |||||||||    
T  5333808 taaatgtaaacccctttttaaattactagatgtatttataattttttttcctaaacatacccctaatta 5333876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 41672442 - 41672510
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta--ttttttcttaaacatatccctaatta 89  Q
    ||||||||| ||| | | ||||||||||||| |||||||||  ||||||| |||||||| |||||||||    
T  41672442 taaatataagcccttatacaaattactagatgcatttattattttttttcctaaacatacccctaatta 41672510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 10593858 - 10593898
Alignment:
Q  29 taaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| |||||||||||||||||||  ||||||||||||||    
T  10593858 taaactccttttcaaattactagatgtatttattatttttt 10593898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 21759901 - 21759849
Alignment:
Q  38 tttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    |||||||||||||||| ||||||||| ||||||| |||||||| || ||||||    
T  21759901 tttcaaattactagatgcatttattacttttttcctaaacatacccgtaatta 21759849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 21809575 - 21809623
Alignment:
Q  42 aaattactagatacatttattat-tttttcttaaacatatccctaatta 89  Q
    |||||||||||| |||||||| | ||||||||||||||| |||||||||    
T  21809575 aaattactagatgcatttattttatttttcttaaacatacccctaatta 21809623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 29635950 - 29636014
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaa 86  Q
    ||||| |||| || ||||||||||| ||||| ||||||||| ||||||| |||||| ||||||||    
T  29635950 taaatgtaaatccattttcaaattattagatgcatttattatttttttcctaaacagatccctaa 29636014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 48832758 - 48832810
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaattactagatacatttatt 62  Q
    ||||| |||||||||||||||| | ||||| ||||||||||| || |||||||    
T  48832758 aaaaatttgtctataaatataagcacctttacaaattactaggtatatttatt 48832810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 39298400 - 39298523
Alignment:
Q  100 tttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgcgttgc 199  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||||| ||| |||| |||||||| ||||||| ||||    
T  39298400 tttgacaaaatggaagattgcatgtgatgataagtattaaggtgcatggtgtacacatagtgtagtgtacgagtaacatatgttgtgatgcatgcattgc 39298499  T
Q  200 aaatgatacatggtgtggtgcatg 223  Q
    ||  || |||||||||| ||||||    
T  39298500 aagagacacatggtgtgatgcatg 39298523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 44783121 - 44783035
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatg 181  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  44783121 atacatttgacaagatggaaggttgcatgtggtgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtaacacatg 44783035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 54980441 - 54980355
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatg 181  Q
    ||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||||||    
T  54980441 atacatttgacaagatggaaggttgcatgtgatgacaagtagcaggatgcatggtgtacacatggtgtagtgtatgagtaacacatg 54980355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 95 - 181
Target Start/End: Complemental strand, 54967809 - 54967723
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatg 181  Q
    ||||||||||||| ||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||||||||| ||||||||    
T  54967809 atacatttgacaagatggaaggttgcatgtgatgataagtagcaggatgcatggtgtacacatggtgtagtgtatgagtaacacatg 54967723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 17645401 - 17645524
Alignment:
Q  99 atttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgcgttg 198  Q
    |||||||||| | |||||||||||||||| |||||||| | |||| |||||||| |  | |||||||||||||| |||| |||||||||||||||| |||    
T  17645401 atttgacaaactcgaaggttgcatgtgatcacaagtagcagggtgtatggtgtatagtttgtgtagtgtatgagtaacatatgttgtggtgcatgcattg 17645500  T
Q  199 caaatgatacatggtgtggtgcat 222  Q
    |||  || |||||||| |||||||    
T  17645501 caagagacacatggtgcggtgcat 17645524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 21933142 - 21933054
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||||||  | ||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  21933142 atttgactaaaaaattgtccctgaatataaacccattttcaaattactagatgcatttattatttttttcctaaacatacccctaatta 21933054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 42891613 - 42891547
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  42891613 taaatgtaaacccctcttcaaattactagatgcatttattattttttcctaaacatacccctaatta 42891547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11388340 - 11388251
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttct-taaacatatccctaatta 89  Q
    ||||||| |||||| |||||  ||||| ||||||| ||||||||||||||||| ||||||||||||||| | |||||||| |||||||||    
T  11388340 tatttgattaaaaatttgtccttaaatgtaaaccctttttcaaattactagatgcatttattattttttttctaaacatacccctaatta 11388251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4979513 - 4979601
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||| |||||||||||   ||||| |||||| ||||||||||||||| ||||||||||||| ||||| | ||||||||| ||||||    
T  4979513 tatttgaataaaaaattgtacctaaatgtaaacctcttttcaaattactaaatacatttattatcttttccttaacatatccttaatta 4979601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 28477579 - 28477513
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||    
T  28477579 taaatgtaaacctcttttcaaattactagatgcatttattattttttctaaaatatacccctaatta 28477513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 26999237 - 26999172
Alignment:
Q  24 aaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||| |||||||||||| |||||| ||||| |||||||||||||||| |||||||| |||||||||    
T  26999237 aaatgtaaacccctttttaaattattagatgcatttattattttttcctaaacatacccctaatta 26999172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 44698438 - 44698487
Alignment:
Q  29 taaaccccttttcaaattactagatacatttattattttttcttaaacat 78  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  44698438 taaacccattttcaaattacaagatacatttattattttttcttaaacat 44698487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 11140885 - 11140825
Alignment:
Q  29 taaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||||||  |||||||||    
T  11140885 taaacctcttttcaaattactagatgcatttattattttttcctaaacatgcccctaatta 11140825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 13084277 - 13084336
Alignment:
Q  29 taaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  13084277 taaactccttttcaaattactagatgcatttatta-tttttcctaaacatatccctaatta 13084336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 41739871 - 41739951
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    |||||||||||  ||||||||||| | ||||||||||||||| ||||||||||| ||||||| |||||||| || ||||||    
T  41739871 aaaaaattgtccctaaatataaactcattttcaaattactaggtacatttattatttttttcctaaacatacccttaatta 41739951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 12077652 - 12077721
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta---ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||||||||| |||||||||   ||||||| |||||||| |||||||||    
T  12077652 taaatgtaaaccccttttcaaattactagatgcatttattaattttttttcctaaacatacccctaatta 12077721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 20945211 - 20945278
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||| ||||| |||||||| |||||||||    
T  20945211 taaatgtaaaccccttttcaaattactagatgcatttgttattattttcctaaacataaccctaatta 20945278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 41727149 - 41727216
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||||| ||||||||| || ||||||||| |||||||||||||||| |||||||||    
T  41727149 taaatgtaaacccctttttaaattactaaatgcatttattatttttttcttaaacatacccctaatta 41727216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 44083822 - 44083755
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt-cttaaacatatccctaatta 89  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||| | |||||||| |||||||||    
T  44083822 taaatgtaaacccattttcaaattactagatccatttattattttttccctaaacatacccctaatta 44083755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 48309659 - 48309572
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||| |||| |||||||  ||||| ||||||  |||||||||||||||||| |||||||  |||||| |||||||| |||||||||    
T  48309659 atttgattaaagaattgtccctaaatttaaaccaattttcaaattactagatatatttatttatttttcctaaacatacccctaatta 48309572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 43187012 - 43187058
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  43187012 taaatataaaccccttttcaatttactagatgcatttattatttttt 43187058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 31474625 - 31474552
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||||| | |||| |||||| |||||  ||||||||||||||| |||||||| |||||||||    
T  31474625 ttgtctctaaatataaactcatttttaaattattagatgtatttattattttttcctaaacatacccctaatta 31474552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 31531038 - 31531106
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||  |||||| |||||||| |||||||||    
T  31531038 taaatgtaaactccttttcaaattactagatgcatttattattatttttcctaaacatacccctaatta 31531106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 35145426 - 35145359
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt--ttttcttaaacatatccctaatta 89  Q
    ||||||||||| | ||||||||||||||||| |||||||||||  ||||| ||||||||||||||||||    
T  35145426 taaatataaactc-ttttcaaattactagatgcatttattattttttttcctaaacatatccctaatta 35145359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 31819601 - 31819534
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||||||| ||  ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  31819601 taaatataacccaattttcaaattactagatgcatttattatttttttcctaaacatacccctaatta 31819534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 33288047 - 33288004
Alignment:
Q  36 cttttcaaattactagatacatttattattttttcttaaacata 79  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||    
T  33288047 cttttcaaattactagatacatttactattttttcctaaacata 33288004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 39932128 - 39932049
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacata 79  Q
    ||||||| |||||| ||||   ||||||||||||| |||||||| ||||| |||||||||||||| ||||| ||||||||    
T  39932128 tatttgattaaaaatttgttcctaaatataaacccattttcaaaatactaaatacatttattattgttttcctaaacata 39932049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 44338296 - 44338209
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||| |||||| ||||   ||||| |||||||||||||||||| |||||| |||||||  | ||||| |||||||| |||||||||    
T  44338296 atttgactaaaaatttgtacctaaatgtaaaccccttttcaaattcctagatgcatttatattattttcctaaacatacccctaatta 44338209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 50524887 - 50524954
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||||| |||||||||||| |||| ||||||||| ||||||| |||||||| |||||||||    
T  50524887 taaatctaaaccctttttcaaattacaagatgcatttattatttttttcctaaacatacccctaatta 50524954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 25750713 - 25750648
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||| | |||||||||||||||||||||||||||| ||||| || |||||||| ||||||    
T  25750713 taaatgtaaactctttttcaaattactagatacatttattatattttc-tatacatatccttaatta 25750648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 29645519 - 29645473
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| |||||| |||||||||||||||||| |||||||||||||||    
T  29645519 taaatgtaaaccacttttcaaattactagatgcatttattatttttt 29645473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 34055776 - 34055842
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| || ||||||||| ||||||||||||| ||||||||||||||  |||||||| || ||||||    
T  34055776 taaatgtatacccctttttaaattactagatatatttattatttttttctaaacatacccataatta 34055842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 35055980 - 35055914
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||| | |||||||||||| ||||| ||||||||||||| || |||||||| || ||||||    
T  35055980 taaatataaatctcttttcaaattattagatgcatttattattttatcctaaacatacccataatta 35055914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 40645867 - 40645802
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||| | |||||||||| ||||| |||||||||| ||||| |||||||| |||||||||    
T  40645867 taaatataaacctcctttcaaattattagatgcatttattat-ttttcctaaacatacccctaatta 40645802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 41308681 - 41308754
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    |||||| ||||| |||| ||| |||||||||||||||| ||||||||| ||||||| |||||||| |||||||||    
T  41308681 ttgtctctaaat-taaatcccctttcaaattactagatgcatttattatttttttcctaaacatacccctaatta 41308754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 46048718 - 46048672
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  46048718 taaatgtaaaccccttttcaaattaatagatgcatttattatttttt 46048672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11396940 - 11396851
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||||| |||||| || ||  ||||| ||||| ||||||||||||| ||||| ||||||||||| ||||| ||||||||  ||||||||    
T  11396940 tatttgactaaaaatttatccttaaatgtaaactccttttcaaattattagatgcatttattatttttttcctaaacatacacctaatta 11396851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 27047077 - 27047137
Alignment:
Q  9 taaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| |||||| ||||||||||  || ||||||||||||||||  ||||||||||||||    
T  27047077 taaaaatttgtctctaaatataaattccatttcaaattactagatgaatttattatttttt 27047137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 33411901 - 33411953
Alignment:
Q  37 ttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||| |||||||||||||||||||| | |||| |||||| ||||||    
T  33411901 ttttcaaattattagatacatttattatttttccctaaatatatccttaatta 33411953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 50363206 - 50363155
Alignment:
Q  37 ttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||||| ||||||||||||| ||||| |||||||| |||||||||    
T  50363206 ttttcaaattactaaatacatttattat-ttttcctaaacatacccctaatta 50363155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 14645800 - 14645863
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttct-taaacatatcccta 85  Q
    ||||| |||||||||||| ||||||||| || ||||||||||||||| | |||||||| |||||    
T  14645800 taaatgtaaacccctttttaaattactatatgcatttattattttttttctaaacataccccta 14645863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 26043212 - 26043146
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||  ||||||||||| ||||| |||||||| |||||||||    
T  26043212 taaatgtaaactccttttcaaattactagacgcatttattatttttttcctaaacata-ccctaatta 26043146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 26517126 - 26517193
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt-cttaaacatatccctaatta 89  Q
    ||||| ||||| | ||| ||||||||||||| ||||||||||||||| | |||||||| |||||||||    
T  26517126 taaatgtaaactcttttacaaattactagatgcatttattattttttgcctaaacatacccctaatta 26517193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 29349573 - 29349506
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||| | ||||||||||||||||| |||| |||| |||||||||||||||| | |||||||    
T  29349573 taaatgtaaactcattttcaaattactagatgcattaattatttttttcttaaacatacctctaatta 29349506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 11345515 - 11345469
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| |||||||||||||||||||||||||  |||||| |||||||    
T  11345515 taaatttaaaccccttttcaaattactagatgtatttataatttttt 11345469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 22659762 - 22659708
Alignment:
Q  36 cttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||    
T  22659762 ctttttaaattactagatgcatttattattattttcataaacatatccttaatta 22659708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 29676652 - 29676717
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||| | ||||||||||||| || |||||||||||||| | |||||||| |||||||||    
T  29676652 taaatgtaaacctcatttcaaattacta-atgcatttattatttttccctaaacatacccctaatta 29676717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 30476219 - 30476169
Alignment:
Q  40 tcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  30476219 tcaaattactagatgcatttattatttttttcctaaacatacccctaatta 30476169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48901405 - 48901471
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttt 67  Q
    ||||||| ||||||  ||||| ||||| |||||||||||| |||||| || || |||||||||||||    
T  48901405 tatttgaataaaaacatgtctctaaatctaaacccctttttaaattaataaatgcatttattatttt 48901471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 5504492 - 5504553
Alignment:
Q  29 taaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||||| |||| ||||||||| || ||||||||| ||||||| |||||||| |||||||||    
T  5504492 taaacccttttttaaattactatatgcatttattatttttttcctaaacatacccctaatta 5504553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 31650549 - 31650594
Alignment:
Q  24 aaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||||||||  |||||||||||| |||||||||||||| ||||||    
T  31650549 aaatataaacttcttttcaaattaatagatacatttattttttttt 31650594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 21864499 - 21864418
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaa 86  Q
    ||||||| |||||| ||||| ||||||||||    ||||| |||||||||||| |||||    ||||||| |||||||||||||||    
T  21864499 tatttgactaaaaatttgtccataaatataagatactttttaaattactagatgcattt----ttttttcctaaacatatccctaa 21864418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 3346349 - 3346446
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcat 192  Q
    |||||||||||||||||||||||||| ||||||||||| ||| |||||||||| |||||| |||||||||||||||||  ||||||||||||||||||    
T  3346349 atacatttgacaaaatggaaggttgcttgtgatgacaaatagcaaggtgcatgatgtacatatggtgtagtgtatgagtgacacatgttgtggtgcat 3346446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 37287459 - 37287360
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgc 194  Q
    |||||||||| ||||| |||||||||||||||||| |  | ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  37287459 atacatttgataaaatagaaggttgcatgtgatgagatatggtaaggtgcatagtgtacacatggtgtagtgtatgagtaacacatgttgtggtgcatgc 37287360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 51787966 - 51787900
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51787966 taaatataaactcctttttaaattactagatacatttattattttttcctaaacatatccctaatta 51787900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 39414443 - 39414363
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||||||||  |||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||    
T  39414443 aaaaaattgtccctaaatataaaccccttttcaaattactagacacatttattatttttttcctaaacatacccctaatta 39414363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 42683427 - 42683339
Alignment:
Q  104 acaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcat 192  Q
    |||||||| ||||||| |||||||||||||||  ||||||||||||||||||||| |||||| |||||| |||||||||  ||||||||    
T  42683427 acaaaatgaaaggttgtatgtgatgacaagtaacaaggtgcatggtgtacacatgatgtagtatatgagtaacacatgtcatggtgcat 42683339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 7002399 - 7002312
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||||||  |||||||||||| ||||||||||||||||||  ||||||||||||||| |||||||| || ||||||    
T  7002399 atttgactaaaaaattgtccctaaatataaacctcttttcaaattactagatgtatttattattttttcctaaacatacccttaatta 7002312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 52552421 - 52552487
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  52552421 taaatataaatccctttttaaattattagatacatttattattttttcttaaacatacccctaatta 52552487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 52198637 - 52198704
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  52198637 taaatgtaaaccccttttcaaattactagatacatttattatttttttcctaaacatacccctaatta 52198704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 10541147 - 10541233
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||| || ||| ||||||||||| | |||| |||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  10541147 tttgattaaaaatttatctttaaatataaactcatttttaaattattagattcatttattattttttcctaaacatatccctaatta 10541233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 24072970 - 24072896
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| || ||||||    
T  24072970 ttgtccataaatataaaccccttttcaaattactagatgcatttattatttttttcctaaacatacccttaatta 24072896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 38394167 - 38394082
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacat 180  Q
    |||||||||| ||||| ||| ||||||||||||||||||||| || ||||| | ||||||||| |||| ||||||||| |||||||    
T  38394167 atacatttgataaaatagaatgttgcatgtgatgacaagtagcaacgtgcacgatgtacacatagtgtggtgtatgagtaacacat 38394082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 54359885 - 54359812
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||| ||||| |||||| |||||||||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  54359885 ttgtctttaaatgtaaaccacttttcaaattactagatgcatttattattttttcctaaacatacacctaatta 54359812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 31840291 - 31840225
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||||||||||| ||||| ||||||| || ||||  ||||||||||||||||||    
T  31840291 taaatataaaccccttttcaaattattagatgcatttatcatatttttctaaacatatccctaatta 31840225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 40411258 - 40411319
Alignment:
Q  29 taaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||    
T  40411258 taaactccttttcaaattactagatgcatttattatttttttcttaaacatacccctaatta 40411319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 21171925 - 21171853
Alignment:
Q  17 tgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||| |||||  ||||||||||||||| ||||||||||||||||||  |||||||| |||||||||    
T  21171925 tgtctctaaatgtaaacttcttttcaaattactatatacatttattatttttttctaaacatacccctaatta 21171853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 5536680 - 5536613
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttt-tcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||||||||||||||| |||||||||||||| || |||||||| |||||||||    
T  5536680 taaatgtaaacctcttttcaaattactagatgcatttattatttttctcctaaacatacccctaatta 5536613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 20016738 - 20016671
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| |||||| ||||   |||||||||||| |||||||||||||||||| |||||||||||||||    
T  20016738 atttgactaaaaatttgttattaaatataaacctcttttcaaattactagattcatttattatttttt 20016671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 22651660 - 22651593
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  22651660 taaatgtaaactccttttcaaattactagatgcatttattatttttttcctaaacatacccctaatta 22651593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 43801004 - 43800937
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||||| |||| ||| |||||||||    
T  43801004 taaatgtaaaccccctttcaaattactagatacatttattattattttcctaaatatacccctaatta 43800937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 13096457 - 13096518
Alignment:
Q  30 aaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||||| || ||||||    
T  13096457 aaaccccttttcaaattactagatacatttattattatttttcctaaacatacccttaatta 13096518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 31486691 - 31486625
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatc 81  Q
    |||||| ||||| |||||||||||||||||||||| || ||||||||||| ||||| ||||||||||    
T  31486691 ttgtctttaaatgtaaaccccttttcaaattactaaattcatttattattattttcctaaacatatc 31486625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 31917571 - 31917506
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||||| ||||||||||||||||| ||||||| |||||||| |||||||| |||||||||    
T  31917571 taaatgtaaaccctttttcaaattactagatgcatttatgattttttcctaaacata-ccctaatta 31917506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 50782960 - 50782902
Alignment:
Q  31 aaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||| || ||||||||| |||||||||||||||| |||||||| |||||||||    
T  50782960 aacccctttttaagttactagatgcatttattattttttcctaaacatacccctaatta 50782902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 54701196 - 54701272
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacat---ttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||| ||||||||||||||||||||||   ||||||||||||| |||||||| || ||||||    
T  54701196 ttgtccataaatgtaaacctcttttcaaattactagatacatttattattattttttcctaaacatacccttaatta 54701272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 52226216 - 52226148
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||    
T  52226216 taaatgtaaacacattttcaaattactagatgcatttattattatttttcttaaacatacccctaatta 52226148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 9757787 - 9757735
Alignment:
Q  100 tttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgta 152  Q
    |||||||||||||||||| | |||||||||||||||||||| | |||||||||    
T  9757787 tttgacaaaatggaaggtagtatgtgatgacaagtagtaagatacatggtgta 9757735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 14602539 - 14602629
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattat---tttttcttaaacatatccctaatta 89  Q
    |||||| ||||||  ||||  ||||| ||||||||||||||||||||||||| ||||||||||   |||||  |||||||| |||||||||    
T  14602539 atttgactaaaaatgtgtccttaaatgtaaaccccttttcaaattactagatgcatttattatatattttttctaaacatacccctaatta 14602629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 20116645 - 20116581
Alignment:
Q  25 aatataaaccccttttcaaattactagatacattta-ttattttttcttaaacatatccctaatt 88  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||   |||||||| ||||||||    
T  20116645 aatataaaccccttttcaaattactagatgcatttatttatttttgtctaaacatacccctaatt 20116581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 48609409 - 48609496
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||| ||||||||||| | | |||||||||||||||  |||||||| |||||||||||| ||| | |||||||    
T  48609409 tttgactaaaaatttgtctttaaatataaactcatattcaaattactagatgtatttattatttttttcttaaatatacctctaatta 48609496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 51918577 - 51918632
Alignment:
Q  34 cccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||||||||||| |||||||||||||||| | |||||| || ||||||    
T  51918577 cccttttcaaattactagatgcatttattattttttcctcaacatacccttaatta 51918632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 20262305 - 20262370
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||||| |||||||||||||| || |||||||| |||||||||||||||| || ||||||    
T  20262305 taaatgtaaacccattttcaaattactaaatgcatttatt-ttttttcttaaacatacccttaatta 20262370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 26203327 - 26203281
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||||    
T  26203327 taaatgtaaactccttttcaaattattagatacatttattatttttt 26203281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 33246407 - 33246473
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||  ||||||||  ||||||||    
T  33246407 taaatgtaaactctttttcaaattactagatgcatttattatttttttctaaacatactcctaatta 33246473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 34543888 - 34543846
Alignment:
Q  36 cttttcaaattactagatacatttattattttttcttaaacat 78  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  34543888 cttttcaaattactagatgcatttattattttttcctaaacat 34543846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 36513188 - 36513277
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    |||||| |||||| |||||  ||||| |||||  |||||||||||| | ||| ||||||||||  |||||| ||||||||||||||||||    
T  36513188 atttgactaaaaatttgtccctaaatgtaaacatcttttcaaattattggatgcatttattattatttttcctaaacatatccctaatta 36513277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 25477407 - 25477354
Alignment:
Q  37 ttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  25477407 ttttcaaattactagatgcatttattatttttttcctaaacatacccctaatta 25477354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 31937003 - 31937071
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    ||||| |||| |||||||||||||||||||| ||||||||||  |||||| ||||||||  ||||||||    
T  31937003 taaatgtaaatcccttttcaaattactagatgcatttattattatttttcctaaacatactcctaatta 31937071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 43509278 - 43509210
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt--ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||| ||||| |||||||||||  |||||||||| ||| |||||||||    
T  43509278 taaatgtaaactccttttcaaattattagatgcatttattattttttttcttaaagatacccctaatta 43509210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 21473763 - 21473715
Alignment:
Q  41 caaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||||| |||||||||| |||||||| | |||||||    
T  21473763 caaattactagatacatttgttattttttcctaaacatacctctaatta 21473715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 28116126 - 28116194
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacattta-ttattt-tttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||||| |||||||||||||||| |||||| |||| ||||||||| ||||||||    
T  28116126 taaatgtaaacctcttttcaagttactagatacatttatttatttatttcctaaacatattcctaatta 28116194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 12624892 - 12624825
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| |||||| |||| ||||| |||||||| |||| ||||    
T  12624892 taaatgtaaactccttttcaaattactagatgcatttactattattttcctaaacatacccctcatta 12624825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 20291542 - 20291475
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatcc 82  Q
    |||||| |||||||||| | ||||||||||||||| ||  |||||||| ||||||| |||||||||||    
T  20291542 ttgtctttaaatataaatctcttttcaaattactaaatgtatttattacttttttcctaaacatatcc 20291475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 30153126 - 30153189
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacata 79  Q
    |||||| ||||| |||| || |||| |||||| ||||| |||||||||||||||| ||||||||    
T  30153126 ttgtctctaaatgtaaatccatttttaaattattagatgcatttattattttttcctaaacata 30153189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 20792187 - 20792141
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| |||| | ||||| ||||||||||||||||||||||||||||    
T  20792187 taaatgtaaatctctttttaaattactagatacatttattatttttt 20792141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 38136547 - 38136484
Alignment:
Q  22 ataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||| ||||| |||||||||||||||||||||||||    ||||||| | |||||| |||||||||    
T  38136547 ataaatgtaaactccttttcaaattactagatacattt----ttttttcctgaacatacccctaatta 38136484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 39237491 - 39237565
Alignment:
Q  17 tgtctataaatataaacccctttt-caaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||| || |||| |||||||||||||  |||||||| ||||||| |||||||| |||||||||    
T  39237491 tgtctctaaatataaaaccttttttcaaattactagatgtatttattatttttttcctaaacatacccctaatta 39237565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 41945682 - 41945728
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| |||| ||||||||||||||||| || |||||||||||||||    
T  41945682 taaatgtaaatcccttttcaaattactatatgcatttattatttttt 41945728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 10602112 - 10602165
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| |||||| ||||| |||||| |||||||||||| |||| ||||||||||    
T  10602112 ttgtccataaatgtaaactcctttttaaattactagatgcattcattatttttt 10602165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 32108029 - 32107981
Alignment:
Q  36 cttttcaaattactagatacatttattat--tttttcttaaacatatcc 82  Q
    ||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  32108029 ctttttaaattactagacacatttattattatttttcttaaacatatcc 32107981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 29744447 - 29744395
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaattactagatacatttatt 62  Q
    |||||||||||| ||||||||| | || || ||||||||||||| ||||||||    
T  29744447 aaaaaattgtctctaaatataagctcccttccaaattactagatgcatttatt 29744395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 34643611 - 34643523
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttt-ttcttaaacatatccctaatta 89  Q
    |||||| |||||| |||| | ||||||||| |   ||||||||||||||||| |||||||| |||| |||| ||||||| || ||||||    
T  34643611 atttgactaaaaatttgtttttaaatataatcttgttttcaaattactagatgcatttatttttttcttctaaaacatacccttaatta 34643523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 39196956 - 39196988
Alignment:
Q  37 ttttcaaattactagatacatttattatttttt 69  Q
    ||||||||||||||||| |||||||||||||||    
T  39196956 ttttcaaattactagatgcatttattatttttt 39196988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 56216686 - 56216718
Alignment:
Q  36 cttttcaaattactagatacatttattattttt 68  Q
    |||||||||||||||||| ||||||||||||||    
T  56216686 cttttcaaattactagatgcatttattattttt 56216718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 2338 - 2424
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatg 181  Q
    ||||||||||||| |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  2338 atacatttgacaagatggaaggtttcatgtgatgacaagtagcaagatgcatggtgtacacatggtgtagtgtatgagtaacacatg 2424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 27641346 - 27641445
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgc 194  Q
    ||||||||||||| |||||||||||||||||||||||||||| || ||||||||| | || || |||| ||||||||| |||||||||| ||||||||||    
T  27641346 atacatttgacaacatggaaggttgcatgtgatgacaagtagcaatgtgcatggtatgcagatagtgttgtgtatgagtaacacatgttatggtgcatgc 27641445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 4813348 - 4813437
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttatta--ttttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||||||  ||||||| ||||||||| ||||||||    
T  4813348 atttgactaaaaaattgtccctaaatataaaccccttttcaaattactagatgcatttattattttttttcctaaacatattcctaatta 4813437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 25269571 - 25269505
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  25269571 taaatataaaccccttttcaaattactagatgcatttattactttttcttaaacatacccctaatta 25269505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 3831242 - 3831175
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatt-attttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  3831242 taaatgtaaaccccttttcaaattactagatgcatttattaattttttcctaaacatatccctaatta 3831175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 23982506 - 23982567
Alignment:
Q  29 taaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  23982506 taaaccccttttcaaattgctagatacatttattattattttcctaaacatatccctaatta 23982567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 4082141 - 4082054
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| |||||| |||||| ||||||||||| | |||||||||||||| || ||||| ||||| ||||| ||||||||||||||||||    
T  4082141 tttgactaaaaatttgtctttaaatataaactcattttcaaattactaaatgcatttgttattattttcctaaacatatccctaatta 4082054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 5084997 - 5085064
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||||||    
T  5084997 taaatgtaaaccccttttcaaattactagatgcatttattatttttttcctaaacatacccctaatta 5085064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 32047635 - 32047572
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaa 86  Q
    ||||| ||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  32047635 taaatgtaaaccctttttcaaattacttgatgcatttattattttttcttaaacatacccctaa 32047572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 5321930 - 5321976
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  5321930 taaatgtaaaccccttttcaaattactagatacatttattatttttt 5321976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 48721777 - 48721843
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||| || |||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  48721777 taaatgtaaccctcttttcaaattactagatgcatttattattttttcctaaacatacccctaatta 48721843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 51390446 - 51390512
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||| || ||||||    
T  51390446 taaatgtaaacccctttttaaattactagatgcatttattattttttcctaaacatacccttaatta 51390512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 5852612 - 5852677
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatt 88  Q
    ||||| |||| | |||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  5852612 taaatgtaaaactcttttcaaattactagatgcatttattattttttcctaaacatatctctaatt 5852677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 15512689 - 15512756
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  15512689 taaatgtaaactccttttcaaattactagatgcatttattattattttcctaaacatacccctaatta 15512756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 28948872 - 28948939
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  28948872 taaatgtaaactccttttcaaattactagatgcatttattattattttcctaaacatacccctaatta 28948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 34696791 - 34696858
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||||||||||||||||||  |||||||| ||||||| ||||||| ||||||||||    
T  34696791 taaatgtaaaccccttttcaaattactagatgtatttattatttttttcctaaacatgtccctaatta 34696858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 13723377 - 13723419
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt 65  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  13723377 taaatataaaccccttttcaaattactagatgcatttattatt 13723419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9380648 - 9380721
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaa 74  Q
    ||||||| | ||||||||||  ||||| ||||||| | ||||||||||||||| |||||||||||||| |||||    
T  9380648 tatttgactgaaaaattgtccctaaatgtaaacccatattcaaattactagatgcatttattatttttccttaa 9380721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 28334128 - 28334196
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||||||||| |||||||| |  |||||| |||||||| |||||||||    
T  28334128 taaatgtaaaccccttttcaaattactagatgcatttatttttatttttcctaaacatacccctaatta 28334196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 36085151 - 36085098
Alignment:
Q  37 ttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  36085151 ttttcaaattactagatgcatttattatttttttcttaaacatacccctaatta 36085098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 15911461 - 15911517
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacata 79  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||    
T  15911461 taaatataaaccccttttcaaattattagatgcatgtattatttttttctaaacata 15911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 30898471 - 30898534
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatcccta 85  Q
    ||||| ||||||| |||||||||||| |||||||||||||| ||||||| |||||||| |||||    
T  30898471 taaatgtaaaccctttttcaaattaccagatacatttattatttttttcctaaacataccccta 30898534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 33232035 - 33231968
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||||||||  | ||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  33232035 taaatataaattcattttcaaattactagatgcatttattatttttttcctaaacatacccctaatta 33231968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 47643742 - 47643683
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaa 75  Q
    ||||| |||||| ||||||||||| ||||||||||||| ||||||||||| ||| |||||    
T  47643742 ttgtccataaatgtaaacccctttccaaattactagatgcatttattattattttttaaa 47643683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 52141083 - 52141146
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatcccta 85  Q
    ||||| ||||| ||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||    
T  52141083 taaatgtaaactccttttcaaatcactagatgcatttattatttttttcctaaacatatcccta 52141146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 9684624 - 9684690
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||||| |||||| ||||| ||||||||||||||| | ||| ||| |||||||||    
T  9684624 taaatgtaaacccctttttaaattattagatgcatttattattttttttaaaatatacccctaatta 9684690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 25063407 - 25063338
Alignment:
Q  23 taaatataaaccccttttcaaattactagatac--atttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||| |||||||||||||||||||||  |||||||| ||||||| |||||||| |||||||||    
T  25063407 taaatgtaaactccttttcaaattactagatacatatttattatttttttcctaaacatacccctaatta 25063338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 29302397 - 29302443
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||||||| | |||||||||||||||||| |||||||||||||||    
T  29302397 taaatataaatctcttttcaaattactagatgcatttattatttttt 29302443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 32715994 - 32715921
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||| ||||| ||||||| ||||||||||||||||| | ||||||||| ||||| |||||||| |||||||||    
T  32715994 ttgtctctaaatgtaaaccc-ttttcaaattactagatgcgtttattatttttttcataaacatacccctaatta 32715921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 28723558 - 28723626
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    |||||||||||  |||||||||||||||||| || |||||||  |||||| |||||||| |||||||||    
T  28723558 taaatataaacatcttttcaaattactagatgcagttattattatttttcctaaacatacccctaatta 28723626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 17426652 - 17426700
Alignment:
Q  41 caaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||| ||||| |||||||||||||||| |||| |||||||||||||    
T  17426652 caaattattagatgcatttattattttttcctaaatatatccctaatta 17426700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 20564986 - 20564930
Alignment:
Q  9 taaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt 65  Q
    |||||| |||||| |||||||||| || ||||||||||||||||| ||||| |||||    
T  20564986 taaaaatttgtctttaaatataaaacctttttcaaattactagatgcatttgttatt 20564930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 34012667 - 34012615
Alignment:
Q  37 ttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||| |||||||||||| |||||||||||||||| |||||||| || ||||||    
T  34012667 tttttaaattactagatgcatttattattttttcctaaacatacccttaatta 34012615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 10842529 - 10842494
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaat 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10842529 aaaaaattgtccataaatataaaccccttttcaaat 10842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 34102550 - 34102503
Alignment:
Q  31 aaccccttttcaaattactagatacatttattattttttcttaaacat 78  Q
    |||| |||||||||||| ||||| |||||||||||||||| |||||||    
T  34102550 aaccacttttcaaattattagatgcatttattattttttcctaaacat 34102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 32152332 - 32152286
Alignment:
Q  43 aattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||| || |||||||||||||||| |||||||| |||||||||    
T  32152332 aattactatatgcatttattattttttcctaaacatacccctaatta 32152286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 44163417 - 44163372
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  44163417 taaatgtaaaccccttt-caaattactagatgcatttattatttttt 44163372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 8877953 - 8877900
Alignment:
Q  37 ttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||| ||||||||||| ||||  |||||||| |||||||||    
T  8877953 ttttcaaattactagatgcatttattatttttttaataaacatacccctaatta 8877900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 13145603 - 13145546
Alignment:
Q  33 ccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    |||||||||||||||||||||  ||| |||| ||||||| |||||||| |||||||||    
T  13145603 ccccttttcaaattactagatgtattaattatttttttcctaaacatacccctaatta 13145546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 49033868 - 49033815
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacattta-ttattttttcttaaa 75  Q
    |||| ||||||||||||| |||||||||||| |||||| |||||||||| ||||    
T  49033868 taaacataaacccctttttaaattactagatgcatttatttattttttcctaaa 49033815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 3072313 - 3072265
Alignment:
Q  41 caaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||| |||||||||||||||||||||  |||||||| | |||||||    
T  3072313 caaattagtagatacatttattatttttttctaaacatacctctaatta 3072265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 10160907 - 10160840
Alignment:
Q  23 taaatataaacccctttt-caaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||||| ||||||||||||| | ||||||||| ||||| |||||||| |||||||||    
T  10160907 taaatgtaaacccctttttcaaattactagatgcgtttattatttttttcctaaacata-ccctaatta 10160840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15457702 - 15457790
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||| ||||||  ||||  |||||||||||||||||| |||||  |||||  ||||||||| |||| |  ||||||| ||||||||    
T  15457702 tatttgaataaaaatgtgtccttaaatataaacccctttttaaatttttagatgtatttattatattttttctaacatattcctaatta 15457790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 25258511 - 25258459
Alignment:
Q  37 ttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||| |||| |||||||||||||||  ||||||||  ||||||||    
T  25258511 ttttcaaattacaagatgcatttattatttttttctaaacatactcctaatta 25258459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 32321895 - 32321931
Alignment:
Q  41 caaattactagatacatttattattttttcttaaaca 77  Q
    |||||||||| || |||||||||||||||||||||||    
T  32321895 caaattactatatgcatttattattttttcttaaaca 32321931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 16698118 - 16698218
Alignment:
Q  122 tgtgatgacaagtagtaaggtgcatggtgtacacatggtgtagtgtatgagcaacacatgttgtggtgcatgcgttgcaaatgatacatggtgtggtgca 221  Q
    |||||||||| |||| |||||||||| |||||| ||||||||||||||||   |||||||||||||||||||| ||||||  || |||||||||||||||    
T  16698118 tgtgatgaca-gtagcaaggtgcatgatgtacatatggtgtagtgtatgacagacacatgttgtggtgcatgcattgcaagagacacatggtgtggtgca 16698216  T
Q  222 tg 223  Q
    ||    
T  16698217 tg 16698218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 7736189 - 7736109
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||||||||  ||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||||||    
T  7736189 aaaaaattgtccctaaatataaaccccttttcaaattactagacgcatttattatttttttcctaaacatatccctaatta 7736109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 22764066 - 22764123
Alignment:
Q  95 atacatttgacaaaatggaaggttgcatgtgatgacaagtagtaaggtgcatggtgta 152  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  22764066 atacatttgacaaaatggaaggttgcatgtgatgacaagtagcaagatgcatggtgta 22764123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 34676339 - 34676272
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  34676339 atttgactaaaaaattgtccctaaatataaactccttttcaaattactagatacatttattttttttt 34676272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 20946303 - 20946237
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||||||||| |||||| |||||||||||||||||| |||||||||||  |||||||||||||||    
T  20946303 tttgagtaaaaatttgtctctaaatataaacccctttttaaattactagacgcatttattatttttt 20946237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 27925469 - 27925401
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttct-taaacatatccctaattag 90  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  27925469 taaatgtaaatcccttttcaaattactagatgcatttattattttttttctaaacatatccctaattag 27925401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 23647995 - 23648067
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaa 75  Q
    ||||| |||||||||||||  |||||| ||| | ||||||||||| |||||||||||||||||||||| ||||    
T  23647995 tttgactaaaaaattgtcttgaaatatgaactctttttcaaattattagatacatttattattttttcctaaa 23648067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 23810578 - 23810506
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaa 75  Q
    ||||| |||||||||||||  |||||| ||| | ||||||||||| |||||||||||||||||||||| ||||    
T  23810578 tttgactaaaaaattgtcttgaaatatgaactctttttcaaattattagatacatttattattttttcctaaa 23810506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 4745345 - 4745286
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttatt 62  Q
    ||||| |||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  4745345 tttgactaaaaatttgtctctaaatataaactccttttcaaattactagatgcatttatt 4745286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 39690394 - 39690461
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  39690394 taaatgtaaactccttttcaaattactagatgcatttattattattttcctaaacatacccctaatta 39690461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 3631026 - 3631092
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||| | |||||||||||||||||  ||||||||||||||| |||||||| |||||||||    
T  3631026 taaatgtaaactctttttcaaattactagatgtatttattattttttcctaaacatacccctaatta 3631092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 7510735 - 7510689
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  7510735 taaatgtaaacgccttttcaaattactagatacatttattatttttt 7510689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 27642705 - 27642631
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||||||| ||||  |||||||| || ||||||    
T  27642705 ttgtccataaatataaactccttttcaaattactagatgcatttattattatttttctaaacatacccttaatta 27642631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 32068196 - 32068126
Alignment:
Q  9 taaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacata 79  Q
    |||||||||||| |||||| |||| | ||||||||||||  | ||||||||||||||||||||| ||||||    
T  32068196 taaaaaattgtccataaatgtaaatctcttttcaaattatcaaatacatttattattttttctttaacata 32068126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 35568919 - 35568981
Alignment:
Q  29 taaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaattag 90  Q
    |||||||||||||||||||||| || ||||||||||| ||||| |||||||| ||||||||||    
T  35568919 taaaccccttttcaaattactaaatgcatttattattattttcctaaacatacccctaattag 35568981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 18729789 - 18729721
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||  |||||| |||||||| |||||||||    
T  18729789 taaatctaaaccccttttcaaattattagatgcatttattattatttttcctaaacatacccctaatta 18729721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9375526 - 9375605
Alignment:
Q  1 tatttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatat 80  Q
    ||||||| |||||  || ||||||||||||||||  |||| ||||||||||||| |||||||| |||||||||||||||||    
T  9375526 tatttgactaaaagtttctctataaatataaaccattttt-aaattactagatatatttattatttttttcttaaacatat 9375605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 10934187 - 10934135
Alignment:
Q  37 ttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| | ||||||    
T  10934187 ttttcaaattattagatgcatttattattttttcttaaacatattcttaatta 10934135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 21912316 - 21912249
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| |||||||||||||| |||| ||||||||||| ||||| |||||||| |||||||||    
T  21912316 taaatgtaaactccttttcaaattacaagatgcatttattattattttcctaaacatacccctaatta 21912249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 36750684 - 36750731
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttc 70  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||    
T  36750684 taaatataaacgccttttcaaattactagatgcatttatttttttttc 36750731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 38972035 - 38972102
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| ||||||| |||||||| || ||||||    
T  38972035 taaatttaaaccccttttcaaattaatagatgcatttattatttttttcctaaacatacccttaatta 38972102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 731857 - 731899
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt 65  Q
    ||||||||||||  |||||||||||||||||||||||||||||    
T  731857 taaatataaaccaattttcaaattactagatacatttattatt 731899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 3558935 - 3558981
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||    
T  3558935 taaatataaccctcttttcaaattactagatgcatttattatttttt 3558981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 15967006 - 15967058
Alignment:
Q  38 tttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    |||||||||||||||| ||||||||| |||||||||||| ||| |||||||||    
T  15967006 tttcaaattactagatgcatttattatttttttcttaaagatacccctaatta 15967058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 14044394 - 14044473
Alignment:
Q  10 aaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||| |||||||||| | ||||| |||||| || ||  |||||||||| |||  |||| |||||||||||||    
T  14044394 aaaaaattgtctctaaatataaatctctttttaaattattaaatgtatttattattattttctaaatatatccctaatta 14044473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 15898370 - 15898428
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattat--tttttcttaaacata 79  Q
    ||||||||||| | ||||||||||||||||| ||||||||||  |||||| ||||||||    
T  15898370 taaatataaactctttttcaaattactagatgcatttattattatttttcctaaacata 15898428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 8717880 - 8717934
Alignment:
Q  36 cttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    |||||||||||||||||| || |||||| ||||||| |||||||| |||||||||    
T  8717880 cttttcaaattactagatgcacttattatttttttcctaaacatacccctaatta 8717934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 20975713 - 20975759
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||| ||||| ||||||||||||||||||| |||||||| ||||||    
T  20975713 taaatgtaaactccttttcaaattactagatgcatttattttttttt 20975759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 33862796 - 33862838
Alignment:
Q  37 ttttcaaattactagatacatttatta-ttttttcttaaacat 78  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  33862796 ttttcaaattactagatgcatttattacttttttcttaaacat 33862838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 36347522 - 36347576
Alignment:
Q  36 cttttcaaattactagatacatttattat-tttttcttaaacatatccctaatta 89  Q
    |||||||||||| ||||| |||||||||  |||||| ||||||||||||||||||    
T  36347522 cttttcaaattattagatgcatttattacctttttcctaaacatatccctaatta 36347576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 3247181 - 3247226
Alignment:
Q  24 aaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||||||| |||||||||||||| || || |||||||||||||||    
T  3247181 aaatataaatcccttttcaaattattatatgcatttattatttttt 3247226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 43454184 - 43454111
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||| | ||| ||||| ||||||||||||||  |||  |||||| |||||||| |||||||||||| |||||    
T  43454184 ttgtctctcaatgtaaacaccttttcaaattacatgatgtatttataattttttcctaaacatatcccgaatta 43454111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 4738806 - 4738762
Alignment:
Q  42 aaattactagatacatttattattttttcttaaacatatccctaa 86  Q
    |||||||||||| ||||||||| |||||| |||||||| ||||||    
T  4738806 aaattactagatgcatttattaatttttcctaaacatacccctaa 4738762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 4857394 - 4857469
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttatta--ttttttcttaaacatatccctaatta 89  Q
    |||||| ||||| ||||| | |||||||||||| | || |||||||||  ||||||||||||||||  ||||||||    
T  4857394 ttgtctctaaatgtaaactcattttcaaattaccaaatgcatttattattttttttcttaaacatactcctaatta 4857469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 6173337 - 6173305
Alignment:
Q  30 aaaccccttttcaaattactagatacatttatt 62  Q
    ||||| |||||||||||||||||||||||||||    
T  6173337 aaaccacttttcaaattactagatacatttatt 6173305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 9946278 - 9946333
Alignment:
Q  36 cttttcaaattactagatacatttatta--ttttttcttaaacatatccctaatta 89  Q
    |||||||||||| ||||| |||||||||  ||||||| |||||||| |||||||||    
T  9946278 cttttcaaattattagatgcatttattattttttttcctaaacatacccctaatta 9946333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 24780907 - 24780939
Alignment:
Q  37 ttttcaaattactagatacatttattatttttt 69  Q
    ||||||||| |||||||||||||||||||||||    
T  24780907 ttttcaaatgactagatacatttattatttttt 24780939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 39042583 - 39042551
Alignment:
Q  57 tttattattttttcttaaacatatccctaatta 89  Q
    |||||||||||||| ||||||||||||||||||    
T  39042583 tttattattttttcctaaacatatccctaatta 39042551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 16327327 - 16327253
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattat-tttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| | |||||||    
T  16327327 ttgtctctaaatataaaccccttttcaaattactagatgcatttattatatttttcctaaacatacctctaatta 16327253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 16350725 - 16350651
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattat-tttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| | |||||||    
T  16350725 ttgtctctaaatataaaccccttttcaaattactagatgcatttattatatttttcctaaacatacctctaatta 16350651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 12514469 - 12514534
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttt 68  Q
    ||||| |||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  12514469 tttgactaaaaatttgtctataaatataaacttcttttcaaattactagatgcatttattattttt 12514534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 33607563 - 33607484
Alignment:
Q  9 taaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||||  ||||||||||| | ||||||||||||||||| |||||||| ||||||| |||||||| |||||||||    
T  33607563 taaaaaattgtccctaaatataaacactttttcaaattactagatgcatttatt-ttttttcctaaacatacccctaatta 33607484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 28238224 - 28238290
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||| || ||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  28238224 taaatgtaaatcctttttcaaattactagatgcatttattattttttcctaaacatacccctaatta 28238290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 30249057 - 30248991
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||||  ||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  30249057 taaatgtaaacctattttcaaattactagatccatttattattttttcctaaacatacccctaatta 30248991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 31945815 - 31945889
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    |||||| ||||| |||||  |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  31945815 ttgtctctaaatgtaaacttcttttcaaattactagatgcatttattatttttttcctaaacatatccctaatta 31945889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 34513129 - 34513195
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||  |||||||| |||||||||    
T  34513129 taaatgtaaactccttttcaaattactagatgcatttattatttttttctaaacatacccctaatta 34513195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 12802790 - 12802870
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatcccta 85  Q
    ||||| |||||| |||||| |||||||||||| |||||||||||||||||| | |||||  ||||||| |||||||| |||||    
T  12802790 tttgactaaaaatttgtctctaaatataaacctcttttcaaattactagatgcgtttat--ttttttcataaacataccccta 12802870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 19839127 - 19839060
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||    
T  19839127 taaatgtaaactccttttcaaattactagatgcatttattattattttcctaaacatacccctaatta 19839060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 31780342 - 31780280
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatt 65  Q
    ||||| |||||| |||||| ||||||||||| || ||||||||||||||||| ||||||||||    
T  31780342 tttgactaaaaatttgtctctaaatataaactccatttcaaattactagatagatttattatt 31780280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 6791579 - 6791526
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  6791579 ttgtctttaaatgtaaaccccttttcaacttactagatgcatttattatttttt 6791526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 8644688 - 8644748
Alignment:
Q  9 taaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| |||||| |||||||||||| ||||| |||||||||||| |||||||| ||||||    
T  8644688 taaaaatttgtctgtaaatataaacctcttttaaaattactagatgcatttattgtttttt 8644748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 3887840 - 3887919
Alignment:
Q  11 aaaaattgtctataaatataaaccccttttcaaattactagatacatttatta-ttttttcttaaacatatccctaatta 89  Q
    ||||||| ||| |||||||||||   ||||||||||| ||||| ||||||||| ||||||| |||||||| |||||||||    
T  3887840 aaaaattatctttaaatataaacaatttttcaaattattagatgcatttattatttttttcctaaacatacccctaatta 3887919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 5895923 - 5895860
Alignment:
Q  27 tataaaccccttttcaaattactagatacatttatt-attttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| |||| ||  |||||||||    
T  5895923 tataaaccccttttcaaattactagatgcatttattaattttttcctaaatatgcccctaatta 5895860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 11082600 - 11082514
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||||||| ||||| ||||  | ||||||||| ||||||| ||||||||||| |||| |||| ||| |||||||||    
T  11082600 atttgactaaaaaattgtctctaaatgtaaattctttttcaaat-actagatgcatttattattctttcctaaaaatacccctaatta 11082514  T

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Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 12503498 - 12503587
Alignment:
Q  3 tttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattatttttt---cttaaacatatccctaatta 89  Q
    ||||| |||||| |||| |||||||||||||  |||||||||||||| ||| |||| ||||||||||   | |||||||| |||||||||    
T  12503498 tttgactaaaaatttgtttataaatataaacttcttttcaaattactggatgcattaattatttttttaccctaaacatacccctaatta 12503587  T

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Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 16186766 - 16186708
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacattta--ttattttttcttaaacata 79  Q
    ||||||||||||| ||||||||||||||||| ||||||  |||||||||| ||||||||    
T  16186766 taaatataaaccctttttcaaattactagatgcatttattttattttttcctaaacata 16186708  T

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Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 1764016 - 1763942
Alignment:
Q  16 ttgtctataaatataaaccccttttcaaattactagatacatttattatt-ttttcttaaacatatccctaatta 89  Q
    |||||| ||||||||||| ||||| ||||||| ||||| ||||||||||| ||||| |||||||| || ||||||    
T  1764016 ttgtctctaaatataaacacctttccaaattattagatgcatttattattattttcctaaacatacccttaatta 1763942  T

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Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 31486951 - 31487029
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattattt-tttcttaaacata 79  Q
    |||||| |||||| |||||  ||||| |||| || |||| ||||||||||||||||||||||||| |||| ||||||||    
T  31486951 atttgactaaaaatttgtccttaaatgtaaatccttttttaaattactagatacatttattatttctttcctaaacata 31487029  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 31536203 - 31536163
Alignment:
Q  29 taaaccccttttcaaattactagatacatttattatttttt 69  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  31536203 taaaccccttttcaaattactagttgcatttattatttttt 31536163  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 30465877 - 30465924
Alignment:
Q  22 ataaatataaaccccttttcaaattactagatacatttattatttttt 69  Q
    |||||| |||||  |||||||||||||||||| |||||||||||||||    
T  30465877 ataaatgtaaacttcttttcaaattactagatgcatttattatttttt 30465924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 31062503 - 31062456
Alignment:
Q  41 caaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||||||||||| |||||||||| ||||||| |||||| |||||||||    
T  31062503 caaattactagatgcatttattat-ttttcttgaacatacccctaatta 31062456  T

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Target: scaffold0038 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 38386 - 38452
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||| || ||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  38386 taaatgtaaatcctttttcaaattactagatgcatttattattttttcctaaacatacccctaatta 38452  T

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Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 49332 - 49266
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaacatatccctaatta 89  Q
    ||||| |||| ||||||||||||||||||||  ||||||||||||||| |||||||| |||||||||    
T  49332 taaatgtaaatcccttttcaaattactagatgtatttattattttttcctaaacatacccctaatta 49266  T

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Target: scaffold1091 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 1828 - 1889
Alignment:
Q  29 taaaccccttttcaaattactagatacatttattat-tttttcttaaacatatccctaatta 89  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||    
T  1828 taaaccccttttcaaattactagatgcatttattatgtttttcctaaacatacccctaatta 1889  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 25895 - 25827
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttct--taaacatatccctaatta 89  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||| |  |||||||| |||||||||    
T  25895 taaatgtaaacctcttttcaaattactagatatatttattatttttttttctaaacatacccctaatta 25827  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 214839 - 214749
Alignment:
Q  2 atttgagtaaaaaattgtctataaatataaaccccttttcaaattactagatacatttattat---tttttcttaaacatatccctaatta 89  Q
    |||||| ||||||  ||||  ||||| ||||||||||||||||||||||||| ||||||||||   |||||  |||||||| |||||||||    
T  214839 atttgactaaaaatgtgtccttaaatgtaaaccccttttcaaattactagatgcatttattatatattttttctaaacatacccctaatta 214749  T

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Target: scaffold0182 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 22610 - 22557
Alignment:
Q  38 tttcaaattactagatacatttatta--ttttttcttaaacatatccctaatta 89  Q
    |||||||||||||||| |||||||||  ||||||| |||||||| |||||||||    
T  22610 tttcaaattactagatgcatttattaatttttttcctaaacatacccctaatta 22557  T

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Target: scaffold0166 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 23290 - 23322
Alignment:
Q  37 ttttcaaattactagatacatttattatttttt 69  Q
    ||||||||| |||||||||||||||||||||||    
T  23290 ttttcaaatgactagatacatttattatttttt 23322  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 24240 - 24188
Alignment:
Q  38 tttcaaattactagatacatttattattttttct-taaacatatccctaatta 89  Q
    |||||||||||||||| |||||| |||||||| | |||||||| |||||||||    
T  24240 tttcaaattactagatgcatttactattttttttctaaacatacccctaatta 24188  T

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Target: scaffold0067 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 36198 - 36146
Alignment:
Q  23 taaatataaaccccttttcaaattactagatacatttattattttttcttaaa 75  Q
    |||||||||  | ||||| |||||| |||||||||||||||||||||| ||||    
T  36198 taaatataagtcactttttaaattattagatacatttattattttttcctaaa 36146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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