View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3900_low_18 (Length: 203)

Name: NF3900_low_18
Description: NF3900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3900_low_18
NF3900_low_18
[»] chr3 (43 HSPs)
chr3 (1-203)||(52364861-52365063)
chr3 (129-203)||(3755542-3755616)
chr3 (127-203)||(54261196-54261272)
chr3 (127-203)||(51683015-51683091)
chr3 (127-203)||(26207862-26207938)
chr3 (128-203)||(49082795-49082870)
chr3 (129-203)||(15795555-15795628)
chr3 (127-203)||(6462382-6462458)
chr3 (127-203)||(15320156-15320232)
chr3 (127-203)||(29135883-29135959)
chr3 (127-187)||(42412851-42412911)
chr3 (127-203)||(48341990-48342066)
chr3 (135-203)||(49198329-49198397)
chr3 (129-203)||(47749166-47749239)
chr3 (127-203)||(7328814-7328890)
chr3 (127-203)||(7612987-7613063)
chr3 (130-186)||(40944856-40944912)
chr3 (152-203)||(30045816-30045867)
chr3 (129-200)||(41219565-41219635)
chr3 (129-199)||(28242250-28242320)
chr3 (129-203)||(33251634-33251708)
chr3 (129-203)||(35315928-35316002)
chr3 (129-203)||(35923684-35923758)
chr3 (127-201)||(53649697-53649771)
chr3 (127-172)||(25294930-25294975)
chr3 (130-203)||(40660388-40660461)
chr3 (130-203)||(51060342-51060415)
chr3 (127-203)||(10040527-10040602)
chr3 (127-187)||(13893896-13893956)
chr3 (127-199)||(28997666-28997738)
chr3 (127-203)||(29762216-29762292)
chr3 (127-195)||(30735014-30735082)
chr3 (127-199)||(32873614-32873685)
chr3 (127-171)||(45877424-45877468)
chr3 (127-191)||(49543489-49543553)
chr3 (136-191)||(11249820-11249874)
chr3 (127-186)||(33560830-33560889)
chr3 (129-203)||(47219116-47219190)
chr3 (127-203)||(6286095-6286170)
chr3 (129-173)||(10043122-10043166)
chr3 (127-203)||(10855354-10855430)
chr3 (127-203)||(30767308-30767384)
chr3 (127-203)||(41630573-41630649)
[»] chr2 (39 HSPs)
chr2 (127-203)||(7747244-7747320)
chr2 (127-203)||(21286414-21286490)
chr2 (127-203)||(41220605-41220681)
chr2 (127-203)||(10823030-10823106)
chr2 (127-203)||(3643947-3644023)
chr2 (127-203)||(11069848-11069924)
chr2 (127-203)||(22593105-22593180)
chr2 (127-203)||(25540464-25540540)
chr2 (127-203)||(41187819-41187895)
chr2 (127-201)||(18902592-18902666)
chr2 (127-201)||(44139454-44139528)
chr2 (127-203)||(2550838-2550914)
chr2 (127-187)||(35946709-35946768)
chr2 (127-203)||(38005372-38005448)
chr2 (127-203)||(38962733-38962809)
chr2 (131-203)||(39806945-39807017)
chr2 (129-203)||(331473-331547)
chr2 (127-203)||(20612595-20612672)
chr2 (127-203)||(8410101-8410177)
chr2 (127-203)||(10026676-10026752)
chr2 (127-203)||(15234121-15234197)
chr2 (127-203)||(16034907-16034983)
chr2 (127-203)||(45263727-45263803)
chr2 (129-203)||(42770711-42770785)
chr2 (134-203)||(15079460-15079529)
chr2 (130-203)||(19976867-19976940)
chr2 (127-203)||(9360808-9360884)
chr2 (127-203)||(10046537-10046612)
chr2 (127-203)||(13026471-13026547)
chr2 (127-203)||(39201568-39201644)
chr2 (129-171)||(2784905-2784947)
chr2 (127-185)||(23500760-23500817)
chr2 (139-203)||(2149254-2149319)
chr2 (127-200)||(14853430-14853503)
chr2 (130-203)||(37560146-37560219)
chr2 (127-203)||(12864194-12864270)
chr2 (127-203)||(14169669-14169745)
chr2 (127-203)||(34356176-34356252)
chr2 (127-203)||(41031966-41032041)
[»] chr6 (25 HSPs)
chr6 (127-203)||(21898622-21898698)
chr6 (127-203)||(8612034-8612110)
chr6 (127-199)||(14107422-14107494)
chr6 (127-203)||(5253283-5253359)
chr6 (127-203)||(8932635-8932711)
chr6 (127-203)||(8944101-8944177)
chr6 (127-187)||(13468907-13468967)
chr6 (127-203)||(29444825-29444901)
chr6 (127-186)||(6606174-6606233)
chr6 (127-202)||(8938685-8938760)
chr6 (129-203)||(12606406-12606480)
chr6 (129-203)||(29333199-29333272)
chr6 (127-203)||(30788913-30788987)
chr6 (127-203)||(10311529-10311605)
chr6 (127-199)||(34954683-34954755)
chr6 (127-172)||(2271392-2271437)
chr6 (130-203)||(11142580-11142653)
chr6 (131-203)||(12635792-12635864)
chr6 (127-203)||(13036064-13036140)
chr6 (135-203)||(13584510-13584578)
chr6 (127-175)||(21016839-21016887)
chr6 (127-187)||(5759602-5759662)
chr6 (127-199)||(9147275-9147347)
chr6 (127-203)||(9366483-9366559)
chr6 (127-203)||(24671926-24672002)
[»] chr4 (43 HSPs)
chr4 (127-203)||(53599035-53599111)
chr4 (127-203)||(1446801-1446877)
chr4 (127-203)||(29895762-29895838)
chr4 (127-203)||(8888997-8889073)
chr4 (127-203)||(38166002-38166078)
chr4 (127-199)||(38168232-38168304)
chr4 (127-203)||(42722637-42722713)
chr4 (127-199)||(47078433-47078505)
chr4 (129-196)||(27248405-27248472)
chr4 (129-203)||(2559284-2559358)
chr4 (127-203)||(36145275-36145351)
chr4 (127-203)||(49260725-49260801)
chr4 (127-203)||(52950057-52950133)
chr4 (133-203)||(7246706-7246776)
chr4 (129-203)||(13073515-13073589)
chr4 (130-187)||(7000502-7000559)
chr4 (127-203)||(15839995-15840070)
chr4 (127-203)||(20128284-20128360)
chr4 (127-203)||(24166425-24166501)
chr4 (127-199)||(33647696-33647768)
chr4 (127-203)||(40272391-40272467)
chr4 (127-171)||(41162974-41163018)
chr4 (127-203)||(42722439-42722514)
chr4 (127-203)||(55921009-55921085)
chr4 (127-186)||(13552089-13552148)
chr4 (133-199)||(43468328-43468394)
chr4 (134-203)||(295593-295661)
chr4 (150-203)||(20532469-20532522)
chr4 (130-203)||(21429279-21429352)
chr4 (127-187)||(1940850-1940910)
chr4 (135-203)||(3159529-3159597)
chr4 (127-203)||(3574506-3574582)
chr4 (127-203)||(38075408-38075484)
chr4 (132-203)||(14858691-14858761)
chr4 (127-170)||(34667695-34667738)
chr4 (127-198)||(41339460-41339531)
chr4 (127-173)||(27531747-27531793)
chr4 (130-199)||(36262831-36262898)
chr4 (129-203)||(55005366-55005440)
chr4 (130-203)||(43458591-43458664)
chr4 (127-203)||(5472908-5472984)
chr4 (127-167)||(6032736-6032776)
chr4 (127-203)||(6779186-6779262)
[»] chr8 (31 HSPs)
chr8 (127-203)||(6100446-6100522)
chr8 (127-203)||(10927580-10927656)
chr8 (127-203)||(2467178-2467254)
chr8 (127-203)||(17981415-17981491)
chr8 (127-203)||(38922474-38922550)
chr8 (127-203)||(3418573-3418649)
chr8 (127-203)||(13085498-13085574)
chr8 (127-203)||(14666131-14666207)
chr8 (127-197)||(1013043-1013113)
chr8 (127-203)||(8141076-8141152)
chr8 (127-203)||(44893338-44893414)
chr8 (127-203)||(45521143-45521218)
chr8 (129-203)||(9860055-9860130)
chr8 (127-198)||(24837216-24837287)
chr8 (129-203)||(34613838-34613912)
chr8 (127-203)||(583788-583862)
chr8 (130-187)||(2964053-2964110)
chr8 (127-203)||(8997604-8997680)
chr8 (127-203)||(13358996-13359072)
chr8 (127-203)||(15884616-15884691)
chr8 (127-203)||(18373984-18374060)
chr8 (127-198)||(44031505-44031576)
chr8 (127-197)||(68164-68234)
chr8 (127-191)||(7673729-7673790)
chr8 (150-203)||(6042818-6042871)
chr8 (129-186)||(22276557-22276614)
chr8 (127-191)||(11785890-11785953)
chr8 (127-203)||(22810054-22810129)
chr8 (127-203)||(33401859-33401935)
chr8 (127-203)||(33935795-33935871)
chr8 (127-203)||(43032875-43032951)
[»] chr5 (40 HSPs)
chr5 (127-203)||(1898972-1899048)
chr5 (127-203)||(5731980-5732056)
chr5 (127-203)||(12704985-12705061)
chr5 (127-203)||(9812843-9812919)
chr5 (127-203)||(42086298-42086374)
chr5 (127-203)||(7866552-7866628)
chr5 (127-203)||(19572695-19572771)
chr5 (127-203)||(25417243-25417319)
chr5 (127-203)||(1538402-1538478)
chr5 (127-199)||(8513490-8513562)
chr5 (127-203)||(12766102-12766178)
chr5 (127-203)||(20525809-20525885)
chr5 (127-203)||(28857099-28857175)
chr5 (127-203)||(30349550-30349626)
chr5 (127-199)||(41163524-41163595)
chr5 (137-199)||(31890072-31890133)
chr5 (127-203)||(11845861-11845937)
chr5 (127-203)||(21487588-21487664)
chr5 (129-203)||(3653974-3654046)
chr5 (132-203)||(9168313-9168383)
chr5 (127-186)||(18136357-18136416)
chr5 (127-177)||(6767137-6767187)
chr5 (133-203)||(12081885-12081955)
chr5 (127-197)||(23247417-23247487)
chr5 (130-203)||(35813058-35813131)
chr5 (127-203)||(14588677-14588753)
chr5 (127-203)||(35403572-35403648)
chr5 (129-167)||(15034048-15034086)
chr5 (127-173)||(28856948-28856994)
chr5 (129-203)||(35561878-35561952)
chr5 (127-172)||(14152021-14152066)
chr5 (155-203)||(9805003-9805051)
chr5 (127-203)||(13664231-13664307)
chr5 (127-203)||(16755032-16755108)
chr5 (127-187)||(17693409-17693469)
chr5 (129-197)||(20692906-20692974)
chr5 (127-203)||(30995092-30995168)
chr5 (127-199)||(36783219-36783291)
chr5 (127-203)||(38297024-38297100)
chr5 (127-203)||(38897779-38897854)
[»] chr1 (39 HSPs)
chr1 (127-203)||(5855493-5855569)
chr1 (127-203)||(9853338-9853414)
chr1 (127-200)||(11397953-11398025)
chr1 (127-203)||(10422759-10422835)
chr1 (127-203)||(16956437-16956513)
chr1 (127-203)||(34334356-34334432)
chr1 (127-203)||(45361943-45362019)
chr1 (127-203)||(50503422-50503498)
chr1 (127-199)||(6563412-6563484)
chr1 (127-203)||(34877961-34878037)
chr1 (127-203)||(41663917-41663993)
chr1 (127-203)||(48798131-48798207)
chr1 (127-203)||(49078085-49078161)
chr1 (127-186)||(892375-892434)
chr1 (133-200)||(47312963-47313029)
chr1 (129-203)||(51437442-51437516)
chr1 (127-203)||(8763962-8764038)
chr1 (127-203)||(9659240-9659315)
chr1 (127-203)||(10336487-10336563)
chr1 (127-203)||(18915838-18915914)
chr1 (127-203)||(33418176-33418252)
chr1 (132-203)||(37339795-37339867)
chr1 (129-203)||(18649413-18649487)
chr1 (127-197)||(40288544-40288614)
chr1 (127-173)||(41743244-41743290)
chr1 (127-203)||(2980992-2981068)
chr1 (127-203)||(14254329-14254405)
chr1 (139-203)||(16263528-16263592)
chr1 (127-203)||(33004076-33004152)
chr1 (127-203)||(34719747-34719823)
chr1 (131-203)||(43959882-43959954)
chr1 (129-187)||(32844-32902)
chr1 (127-171)||(2567247-2567291)
chr1 (127-203)||(8905212-8905287)
chr1 (127-203)||(17358532-17358608)
chr1 (127-203)||(17642065-17642141)
chr1 (127-203)||(26325783-26325859)
chr1 (127-171)||(31152687-31152731)
chr1 (127-203)||(31734260-31734335)
[»] scaffold0002 (3 HSPs)
scaffold0002 (127-203)||(319395-319471)
scaffold0002 (129-187)||(412102-412160)
scaffold0002 (127-203)||(543-619)
[»] chr7 (32 HSPs)
chr7 (127-203)||(4195262-4195338)
chr7 (127-186)||(5039495-5039554)
chr7 (127-202)||(10047937-10048012)
chr7 (129-203)||(21190840-21190914)
chr7 (130-203)||(18785645-18785718)
chr7 (127-203)||(1797433-1797509)
chr7 (127-203)||(22993427-22993503)
chr7 (127-203)||(34659199-34659275)
chr7 (127-203)||(43862032-43862108)
chr7 (127-203)||(47341849-47341925)
chr7 (127-203)||(48804656-48804732)
chr7 (129-200)||(16802098-16802169)
chr7 (130-203)||(17748442-17748515)
chr7 (127-187)||(34127696-34127756)
chr7 (127-203)||(43925485-43925561)
chr7 (154-203)||(29151940-29151989)
chr7 (130-199)||(42032072-42032141)
chr7 (127-203)||(13095831-13095907)
chr7 (127-199)||(14650290-14650362)
chr7 (127-203)||(22268089-22268165)
chr7 (127-203)||(22973940-22974016)
chr7 (135-203)||(38578927-38578995)
chr7 (127-186)||(9685712-9685771)
chr7 (129-203)||(365115-365189)
chr7 (127-199)||(1605914-1605986)
chr7 (127-203)||(29805500-29805575)
chr7 (127-203)||(42210322-42210398)
chr7 (127-199)||(4228818-4228887)
chr7 (127-203)||(39474912-39474989)
chr7 (127-203)||(4973170-4973246)
chr7 (127-187)||(5069891-5069951)
chr7 (127-203)||(36619314-36619390)
[»] scaffold0004 (1 HSPs)
scaffold0004 (127-203)||(95041-95115)
[»] scaffold0341 (1 HSPs)
scaffold0341 (127-199)||(18605-18677)
[»] scaffold0170 (1 HSPs)
scaffold0170 (127-203)||(9818-9894)
[»] scaffold0376 (1 HSPs)
scaffold0376 (130-203)||(12646-12719)
[»] scaffold0079 (1 HSPs)
scaffold0079 (130-203)||(8151-8223)
[»] scaffold0050 (1 HSPs)
scaffold0050 (127-203)||(72606-72681)
[»] scaffold0005 (1 HSPs)
scaffold0005 (127-203)||(271134-271210)
[»] scaffold0209 (1 HSPs)
scaffold0209 (127-203)||(12548-12622)
[»] scaffold0006 (1 HSPs)
scaffold0006 (127-187)||(68490-68550)
[»] scaffold0010 (1 HSPs)
scaffold0010 (129-203)||(25844-25918)
[»] scaffold0009 (1 HSPs)
scaffold0009 (127-197)||(9409-9479)
[»] scaffold0291 (1 HSPs)
scaffold0291 (150-203)||(6851-6904)
[»] scaffold0332 (1 HSPs)
scaffold0332 (127-171)||(15304-15348)


Alignment Details
Target: chr3 (Bit Score: 183; Significance: 3e-99; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 3e-99
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 52365063 - 52364861
Alignment:
Q  1 taaggtagaaagtgggtgaatttgggattacatcaatttttatattggtttaaggcttgattatggtctaagtaatgcaagcaaactaaatgtcgacttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52365063 taaggtagaaagtgggtgaatttgggattacatcaatttttatattggtttaaggcttgattatggtctaagtaatgcaagcaaactaaatgtcgacttt 52364964  T
Q  101 cccttaaccaagaaagttattgtttcaggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  52364963 cccttaaccaagaaagttattgtttcaggagctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcg 52364864  T
Q  201 cat 203  Q
    |||    
T  52364863 cat 52364861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 3755542 - 3755616
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||| || |||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  3755542 gagctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcat 3755616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 54261196 - 54261272
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| | ||||||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  54261196 aggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcat 54261272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 51683091 - 51683015
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| || ||||||||||||||||  |||||||||| ||| ||||||||| |||||||||||||||    
T  51683091 aggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcat 51683015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 26207938 - 26207862
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| | | ||||||||| ||| |||||| ||||    
T  26207938 aggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgcat 26207862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 49082795 - 49082870
Alignment:
Q  128 ggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||||||| ||  |||||||||||    
T  49082795 ggagctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcat 49082870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 15795628 - 15795555
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||| |||  ||||||||||    
T  15795628 gagctccttccaaggacgtacccggggaataccgagttcgattcccagg-ggaacaacgcttggtcagtgcgcat 15795555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 6462382 - 6462458
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||  |||  |||||||| ||| |||||||||||    
T  6462382 aggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcat 6462458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 15320156 - 15320232
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||| | ||||||||||| | ||| |||||| ||||    
T  15320156 aggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcat 15320232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 29135883 - 29135959
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||| |||||||||| |||||||||||||||||  ||||||||| ||| ||||||||  ||| |||||||||||    
T  29135883 aggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcat 29135959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 42412911 - 42412851
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||  || |||||||||    
T  42412911 aggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacg 42412851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 48341990 - 48342066
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| | ||||||||||| |||| ||||||||| ||||||||| ||| | |||||||||    
T  48341990 aggagctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcat 48342066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 49198329 - 49198397
Alignment:
Q  135 cttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||  |||||||||||||||| |||||||||||||| ||||||||  ||| |||||||||||    
T  49198329 cttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcat 49198397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 47749239 - 47749166
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| |||||||||| |||||| |||||||||| |||||||||||||| ||||||||  ||| |||||||||||    
T  47749239 gagcttcttccaaggacgtatccagggaataccgggttcgattcctagg-ggaacaactcttggccagtgcgcat 47749166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 7328814 - 7328890
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| |||||||||||| ||| ||||| ||||||| |||||||||| ||| ||||||||  ||| |||||||||||    
T  7328814 aggagttccttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 7328890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 7613063 - 7612987
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||   ||||||||||| |||||||||| ||| ||||||||| ||| | |||||||||    
T  7613063 aggagctccttccaaggacgtacttggggaataccgggttcgattcccagggggaacaacgcttggctagtgcgcat 7612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 40944856 - 40944912
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaac 186  Q
    ||||||||||||||| |||||| | ||||||||||||||||||| ||| ||||||||    
T  40944856 agctccttccaaggacgtatccagagaataccgagttcgattcccagggggaacaac 40944912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 30045816 - 30045867
Alignment:
Q  152 ggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| |||||||||||||| ||||||||| ||| |||||||||||    
T  30045816 ggggaataccgggttcgattcctagggggaacaacgcttggccagtgcgcat 30045867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 41219565 - 41219635
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcg 200  Q
    |||||||||| ||||| |||| |||| |||||| ||||||||||  ||||||||||||||||| ||||||||    
T  41219565 gagctccttctaaggacgtatacggg-aataccaagttcgattctcaggaggaacaacgtttggccagtgcg 41219635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 28242250 - 28242320
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    ||||||||||||| || |||||||| |||||||| ||| |||| | ||||||||||| ||||| |||||||    
T  28242250 gagctccttccaatgacgtatccggagaataccgggttagattgccaggaggaacaatgtttggccagtgc 28242320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 33251634 - 33251708
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||  |  ||||||||||||| |||||| ||||    
T  33251634 gagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgcat 33251708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 35315928 - 35316002
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| ||| |||| ||||| || |||||||||| ||| ||||||||  ||| |||||||||||    
T  35315928 gagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcat 35316002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 35923758 - 35923684
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||| ||||||||| ||| | || |||||||  ||||||||| |||| ||||||||||||| |||||||||||    
T  35923758 gagctcattccaaggacgtacctggagaataccaggttcgattcatagggggaacaacgtttggccagtgcgcat 35923684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 53649697 - 53649771
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgc 201  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||  |||  |||||||  ||| |||||||||    
T  53649697 aggagctccttccaaggacgtattcggggaataccgggttcgattctcagggtgaacaacacttggccagtgcgc 53649771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 25294930 - 25294975
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattc 172  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||    
T  25294930 aggagctccttccaaggacgtatccggggaataccgggtttgattc 25294975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 40660461 - 40660388
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||| || ||  |||||||| |||||||  |||||||||||||||||||||| ||||  ||||||||||    
T  40660461 agctccttctaaagagttatccgggaaataccggattcgattcctaggaggaacaacatttggtcagtgcgcat 40660388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 51060415 - 51060342
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| ||||||||||||| || |||||||||  ||| ||||||||  |||  ||||||||||    
T  51060415 agctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcat 51060342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 10040527 - 10040602
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||| ||||| ||| |||||||||| || |||||||||  ||| ||||||||| ||| |||||||||||    
T  10040527 aggagctccttctaaggacgtacccggggaatatcgggttcgattctcagg-ggaacaacgcttggccagtgcgcat 10040602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 13893896 - 13893956
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||||||||||||||||| || |||||||||||||| ||| |||| | ||| |||||||||    
T  13893896 aggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacg 13893956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 28997666 - 28997738
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||||| |||  | ||||||||   ||||||||| |||| |||||||| ||||||||||||    
T  28997666 aggagctccttccaaggacgtacacagggaatacatggttcgattcttagggggaacaacatttgaccagtgc 28997738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 29762292 - 29762216
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||||||||||| ||||||||| || || ||||||  ||| | ||||||  ||| |||||||||||    
T  29762292 aggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcat 29762216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 30735082 - 30735014
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgacca 195  Q
    |||||||| ||||||||| | |  ||||||||||||||||||||||  ||| ||||||||| |||||||    
T  30735082 aggagctcattccaaggacgcactcggggaataccgagttcgattctcagggggaacaacgcttgacca 30735014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 32873685 - 32873614
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||| ||||||||| ||| ||||| ||||||  ||||||||||||||  |||||||| |||||||||||    
T  32873685 aggagctcattccaaggacgtacccggg-aataccaggttcgattcctagggagaacaacgcttgaccagtgc 32873614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 45877424 - 45877468
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgatt 171  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||    
T  45877424 aggagccccttccaaggacgtatccggggaataccgggttcgatt 45877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 49543489 - 49543553
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttg 191  Q
    |||||||||||||||||| |||||| ||||||| || |||||||||  | | |||||||||||||    
T  49543489 aggagctccttccaaggacgtatcccgggaatatcgggttcgattctcatggggaacaacgtttg 49543553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 11249874 - 11249820
Alignment:
Q  136 ttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttg 191  Q
    ||||||||||||||  || ||||||||||||| ||||||| |||||||||||||||    
T  11249874 ttccaaggatgtatttggagaataccgagttcaattccta-gaggaacaacgtttg 11249820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 33560830 - 33560889
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaac 186  Q
    |||||||||||||||||||||| | ||||||||||| ||| ||| || ||| ||||||||    
T  33560830 aggagctccttccaaggatgtacctggggaataccgggtttgatccccagggggaacaac 33560889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 47219116 - 47219190
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||| ||||||||| ||||||||||||||||  |||||||||| | | | ||||||| ||| | |||||||||    
T  47219116 gagctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcat 47219190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 6286095 - 6286170
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||| ||||||||||   ||||||| | || |||||||||  |||| ||||||||||    
T  6286095 aggagctccttccaaggaagtatcaggggaataccagattcgatttccagaaggaacaacacttga-cagtgcgcat 6286170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 10043122 - 10043166
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcc 173  Q
    ||||||||| |||||| |||||||||||||| || ||||||||||    
T  10043122 gagctcctttcaaggacgtatccggggaatatcgggttcgattcc 10043166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 10855354 - 10855430
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||||||||||   ||| ||||||| ||| |||| | ||| ||||||||| ||| ||||| |||||    
T  10855354 aggagctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtacgcat 10855430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 30767384 - 30767308
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| |||||||||||||||| | |||||||| || |||||||| | ||| ||||||||  ||| |||||| ||||    
T  30767384 aggagttccttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcat 30767308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 41630649 - 41630573
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||| ||| ||| ||||  ||||||| |||| ||||| | | ||||||||| ||| |||||||||||    
T  41630649 aggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgcat 41630573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 2e-26; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 7747244 - 7747320
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||    
T  7747244 aggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcat 7747320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 21286414 - 21286490
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||| | ||||||| |||||||||||||||    
T  21286414 aggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcat 21286490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 41220605 - 41220681
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||| ||| |||||||||||    
T  41220605 aggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcat 41220681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 10823030 - 10823106
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| ||| |||||| ||||||||||||| ||| |||||||||||    
T  10823030 aggagctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcat 10823106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 3644023 - 3643947
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| ||||||||| ||||||||||||||||| ||| |||| ||| ||||||||||| ||| |||||||||||    
T  3644023 aggagctcattccaaggacgtatccggggaataccgggtttgatttctacgaggaacaacgcttggccagtgcgcat 3643947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 11069848 - 11069924
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| ||||||||| ||| ||||||||||||  |||||||||| ||| ||||||||||||| |||||||||||    
T  11069848 aggagctcattccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcat 11069924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 22593105 - 22593180
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||| ||| ||||||||| ||| |||||||||||    
T  22593105 aggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcat 22593180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 25540540 - 25540464
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| ||||||||| ||||| ||||||||| | |||||||||||||| ||||||||| ||| |||||||||||    
T  25540540 aggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcat 25540464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 41187819 - 41187895
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||| |||||||||| ||| |||| |||||  ||||||| |||||||||||||||    
T  41187819 aggagctccttccaaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcat 41187895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 18902666 - 18902592
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgc 201  Q
    |||||||||||||||||| |||  |||||||||||| |||||||||| | | ||||||||| |||||||||||||    
T  18902666 aggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgc 18902592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 44139454 - 44139528
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgc 201  Q
    |||| ||||||||||||||| ||| ||||||||||| |||||||||| ||| ||||||||| ||| |||||||||    
T  44139454 aggaactccttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgc 44139528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 2550838 - 2550914
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| |||||| |||||||||||||| || |||||||||| ||||||||||||  ||  |||||||||||    
T  2550838 aggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcat 2550914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 35946709 - 35946768
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||||| |||||||||    
T  35946709 aggagctcattctaaggacgtatccggggaataccgagttcgattcctagg-ggaacaacg 35946768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 38005372 - 38005448
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||| | |||||||||| | | ||||||||| ||| |||||||||||    
T  38005372 aggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgcat 38005448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 38962733 - 38962809
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| || |||||| ||||||||||||||||| ||||||||   ||||||||||||| ||| |||||||||||    
T  38962733 aggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcat 38962809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 39807017 - 39806945
Alignment:
Q  131 gctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||| |||||| ||| ||||||||||||| |||||||||| | ||| ||||||||||| |||||||||||    
T  39807017 gctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcat 39806945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 331473 - 331547
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||| ||||||||| ||| ||||||||||||| |||||||||| ||| ||||||||  ||| |||||||||||    
T  331473 gagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 331547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 20612672 - 20612595
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctagga-ggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||||  |||| ||||||||  ||| |||||||||||    
T  20612672 aggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcat 20612595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 8410101 - 8410177
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| |||| ||||| || |||||||||| ||| ||||||||  ||| |||||||||||    
T  8410101 aggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcat 8410177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 10026752 - 10026676
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||  |||  ||||||| |||||||||  ||| ||||||||||||| |||||||||||    
T  10026752 aggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgcgcat 10026676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 15234197 - 15234121
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| |||||||||||   |||||||||  ||| ||||||||  |||||||||||||||    
T  15234197 aggagctccttccaaggacgtacccggggaatactaggttcgattctcagggggaacaacacttgaccagtgcgcat 15234121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 16034907 - 16034983
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||| ||||||||||||| ||||||| ||||||||| ||||||||   ||| ||||||||| |||||||||| ||||    
T  16034907 aggaactccttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcat 16034983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 45263803 - 45263727
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| |||  || |||||||||||||||| |||||||||| ||  ||||||||| ||| |||||||||||    
T  45263803 aggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcat 45263727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 42770785 - 42770711
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| ||||||| | ||||||| |||| ||||  ||| ||||||||| ||| |||||||||||    
T  42770785 gagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcat 42770711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 15079460 - 15079529
Alignment:
Q  134 ccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| ||| ||||||||||| | |||||||| | ||| ||||||||| |||||||||| ||||    
T  15079460 ccttccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgtgcat 15079529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 19976940 - 19976867
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||   ||| |||| ||||||||  ||||||||||    
T  19976940 agctctttccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcat 19976867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 9360884 - 9360808
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||| ||| ||||||||| ||| ||||||||||||  |||||||| ||||  | ||||||||||| |||||||||||    
T  9360884 aggatctcattccaaggacgtacccggggaataccaggttcgattactagaggaaacaacgtttggccagtgcgcat 9360808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 10046612 - 10046537
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| | |||||||| |||||||| |||||||||  | | | |||||||||||| ||||||||||    
T  10046612 aggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttga-cagtgcgcat 10046537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 13026547 - 13026471
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||| ||||||||||||| |||||| ||||||| || ||||||||   ||||||||||| | ||| |||||||||||    
T  13026547 aggaactccttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgcat 13026471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 39201644 - 39201568
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||  || |||||||||| ||||||||  ||| ||||||| ||||| |||||| ||||    
T  39201644 aggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcat 39201568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 2784905 - 2784947
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgatt 171  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||    
T  2784905 gagctcctttcaaggacgtatccgaggaataccgagttcgatt 2784947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 23500817 - 23500760
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaa 185  Q
    ||||||||||||||| || ||||| |||||||| || |||||||||| |||||||||||    
T  23500817 aggagctccttccaaagacgtatc-ggggaatatcgggttcgattcccaggaggaacaa 23500760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 2149319 - 2149254
Alignment:
Q  139 caaggatgtatccggggaatacc-gagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||| |||||||||| |||||||||||   || |||| |||||||| |||||||||||    
T  2149319 caaggatgtatctggggaataccggagttcgattcactgggggaataacgtttggccagtgcgcat 2149254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 14853503 - 14853430
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcg 200  Q
    |||| |||||| |||||||||||||||||||||||   |||||||   ||| |||||||| |||| ||||||||    
T  14853503 aggaactcctttcaaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcg 14853430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 37560146 - 37560219
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| ||| ||| ||||||||  |||||||||  | | |||||||||||||  ||||||||||    
T  37560146 agctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcat 37560219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 12864194 - 12864270
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| || |||| ||||||||||||  ||||||| | ||| ||||||||  |||  ||||||||||    
T  12864194 aggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgcgcat 12864270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 14169745 - 14169669
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| || ||||||||| |||| ||||||||| || |||||||||   || ||||||||  |||||||||||||||    
T  14169745 aggagatctttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcat 14169669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 34356176 - 34356252
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||  ||||||||| ||||| ||||||||||| |||||||| | ||| ||||||||  |||  ||||||||||    
T  34356176 aggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcat 34356252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 41032041 - 41031966
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| || ||||| |||| |||||||||| ||| ||||||||  ||| |||||| ||||    
T  41032041 aggagctccttccaaggacgta-ccagggaacaccgggttcgattcccagggggaacaacacttggccagtgtgcat 41031966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 5e-24; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 21898622 - 21898698
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||| ||| |||||||||||    
T  21898622 aggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcat 21898698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 8612110 - 8612034
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||    
T  8612110 aggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcat 8612034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 14107494 - 14107422
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    ||||||||||||||| || |||| |||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  14107494 aggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgc 14107422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 5253359 - 5253283
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||| ||||||||  ||| |||||||||||    
T  5253359 aggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 5253283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 8932635 - 8932711
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||| ||| ||||||||  ||| | |||||||||    
T  8932635 aggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcat 8932711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 8944101 - 8944177
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||| ||| ||||||||  ||| | |||||||||    
T  8944101 aggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcat 8944177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 13468907 - 13468967
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||||||||||||||||| ||||||||||||||||  |||| ||||||||| |||||||||    
T  13468907 aggagctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacg 13468967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 29444901 - 29444825
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| || ||| |||||| |||||| |||||||| ||||| ||||||||| ||| |||||||||||    
T  29444901 aggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgcgcat 29444825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 6606233 - 6606174
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaac 186  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||  ||| ||||||||    
T  6606233 aggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaac 6606174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 8938685 - 8938760
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgca 202  Q
    ||||||||||||||| ||  ||||||||||||||   |||||||||| ||||||||||||  ||||||||||||||    
T  8938685 aggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgcgca 8938760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 12606406 - 12606480
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||| | ||||||||||||||||   ||||||| | ||| ||||||||||||| |||||||||||    
T  12606406 gagctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcat 12606480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 29333272 - 29333199
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| ||| || |||||||||| |||||||| | ||| ||||||||||||| |||||||||||    
T  29333272 gagctccttccaaggacgtacccagggaataccgggttcgatttccagg-ggaacaacgtttggccagtgcgcat 29333199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 30788987 - 30788913
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||  |   ||||||||||||| |||||||||||    
T  30788987 aggagctccttccaaggatgtatccggggaatatcgggtttgattctca--tggaacaacgtttggccagtgcgcat 30788913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 10311605 - 10311529
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| | ||||||||||||||||| ||||||| |  | | ||||||||| ||| |||||||||||    
T  10311605 aggagctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcat 10311529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 34954755 - 34954683
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||||| ||| | ||||||||||  |||||||||  ||| ||||||||||||| |||||||    
T  34954755 aggagctccttccaaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgc 34954683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 2271437 - 2271392
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattc 172  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||    
T  2271437 aggagctccttccaaggacgtattcggggaataccgggttcgattc 2271392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 11142580 - 11142653
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| |||||||||  || ||||| |||||||||||||||||  ||  | |||||||||||||||||||||||    
T  11142580 agctcattccaaggacatacccgggaaataccgagttcgattcgcagtggaaacaacgtttgaccagtgcgcat 11142653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 12635792 - 12635864
Alignment:
Q  131 gctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||| ||||||||||||||||  ||| |||||| ||| | ||||||| ||| | |||||||||    
T  12635792 gctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcat 12635864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 13036140 - 13036064
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||| ||||||||| || ||||||||   ||| ||||||||  ||| |||||||||||    
T  13036140 aggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcat 13036064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 13584578 - 13584510
Alignment:
Q  135 cttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||| |||  || ||||||||  |||||||||||| || |||||||||||| |||||||||||    
T  13584578 cttccaaggacgtactcgaggaataccaggttcgattcctaagatgaacaacgtttggccagtgcgcat 13584510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 21016887 - 21016839
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattccta 175  Q
    |||||||||||||| ||| ||| ||||||||||||| ||||||||||||    
T  21016887 aggagctccttccagggacgtacccggggaataccgggttcgattccta 21016839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 5759602 - 5759662
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||| ||||||||||||| ||| ||| |||||| || ||| |||||| |||||||||||||    
T  5759602 aggaactccttccaaggacgtacccgaggaatatcgggtttgattccgaggaggaacaacg 5759662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 9147275 - 9147347
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||| ||||||||| ||| | |||||||| || |||||||||| ||| ||||| ||  |||||||||||    
T  9147275 aggagctcattccaaggacgtacctggggaatatcgggttcgattcccagggggaacgacacttgaccagtgc 9147347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 9366559 - 9366483
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||||||||||   |||||||| |  ||||||||  |||| |||| |||| ||| |||||||||||    
T  9366559 aggagctccttccaaggatgtacttggggaatatcaggttcgatttttagggggaataacgcttggccagtgcgcat 9366483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 24672002 - 24671926
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| |||||| ||||| || |||||||| |||| ||||| ||  ||||||||  |||||||||| ||||    
T  24672002 aggagctcctttcaaggacgtatctggagaataccgggttctattcccagagggaacaacacttgaccagtgtgcat 24671926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 5e-24; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 53599035 - 53599111
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  53599035 aggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcat 53599111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 1446801 - 1446877
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||  ||| |||||||||||    
T  1446801 aggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 1446877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 29895762 - 29895838
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||  ||| |||||||||||    
T  29895762 aggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 29895838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 8888997 - 8889073
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||  |||  ||||||||||    
T  8888997 aggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcat 8889073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 38166002 - 38166078
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||| | ||| |||||| ||| ||||||||| ||| |||||||||||    
T  38166002 aggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcat 38166078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 38168232 - 38168304
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||||| ||| ||||||||||||  |||||||||||| ||||||||||| ||| |||||||    
T  38168232 aggagctccttccaaggacgtacccggggaataccaggttcgattcctaagaggaacaacgcttggccagtgc 38168304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 42722713 - 42722637
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||| ||||||| |||| ||||| ||||||||||||| ||| |||||||||||    
T  42722713 aggagctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcat 42722637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 47078433 - 47078505
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||| ||||||||| ||| |||||||    
T  47078433 aggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 47078505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 27248405 - 27248472
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccag 196  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||| ||| ||||    
T  27248405 gagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggccag 27248472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 2559284 - 2559358
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| ||| | |||||||||||  ||||||| ||||||||||||||| ||| |||||||||||    
T  2559284 gagctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcat 2559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 36145351 - 36145275
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| ||||||||| ||| ||||||||||||| |||||||||| ||| | ||||||| |||| ||||||||||    
T  36145351 aggagctcattccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcat 36145275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 49260801 - 49260725
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||| ||||||||||||||||||||||||||||| || ||| ||||| | | ||||||||| ||| |||||||||||    
T  49260801 aggaactccttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcat 49260725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 52950057 - 52950133
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| | |||||||| || |||||||||| ||| ||||||||| ||| |||||||||||    
T  52950057 aggagctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcat 52950133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 7246776 - 7246706
Alignment:
Q  133 tccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||| ||| ||||||||||| | |||||||||||||  ||||||||| ||| |||||||||||    
T  7246776 tccttccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcat 7246706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 13073515 - 13073589
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| ||| | || ||||||||||||||||||| | | ||||||| ||||| |||||||||||    
T  13073515 gagctccttccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgcgcat 13073589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 7000502 - 7000559
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    ||||||||||||||| |||  ||||||||||||||||||||||| |||| ||||||||    
T  7000502 agctccttccaaggacgtactcggggaataccgagttcgattcccaggaagaacaacg 7000559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 15840070 - 15839995
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||   ||||||||||| |||||||||||| || ||| |||||||| |||||||||||    
T  15840070 aggagctccttccaaggacgtacttggggaataccgggttcgattccta-gaagaataacgtttggccagtgcgcat 15839995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 20128284 - 20128360
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| |||||||||||| ||||||||||||||| | |||||||||  ||| ||||||| | ||| |||||||||||    
T  20128284 aggagttccttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcat 20128360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 24166425 - 24166501
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||  |||||||||| | |||||||||| | | | ||||||||||| |||||||||||    
T  24166425 aggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgcgcat 24166501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 33647696 - 33647768
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    ||||||||||| |||||| ||||| ||||||||||| |||||||| | |||  |||||||| |||||||||||    
T  33647696 aggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgc 33647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 40272467 - 40272391
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| |||||| ||||||||||||||||| || |||||||| | | | ||||||||| ||| |||||||||||    
T  40272467 aggagctctttccaatgatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcat 40272391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 41163018 - 41162974
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgatt 171  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||    
T  41163018 aggagctccttccaaggacgtatccgggaaataccgagttcgatt 41162974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 42722514 - 42722439
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| ||| |||||| ||||||||||||| ||| |||||| ||| ||||||||  |||||||||||||||    
T  42722514 aggagctcctttcaaagatgtacccggggaataccgggtttgattcccagg-ggaacaacacttgaccagtgcgcat 42722439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 55921009 - 55921085
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| | | ||||||||||||| |||||||||| ||| ||||||||  |||  ||||||||||    
T  55921009 aggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcat 55921085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 13552089 - 13552148
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaac 186  Q
    |||||||||||||||| | |||||||||||||| || |||||||||  ||||||||||||    
T  13552089 aggagctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 13552148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 43468328 - 43468394
Alignment:
Q  133 tccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||| | ||| ||||||||||||| |||||||||| ||| ||||||||| ||| |||||||    
T  43468328 tccttccaagaacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgc 43468394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 295661 - 295593
Alignment:
Q  134 ccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| ||||| ||||||||||||||||   ||||||||| || |||||||||||||| |||||||||||    
T  295661 ccttctaaggacgtatccggggaataccagattcgattcccag-aggaacaacgtttggccagtgcgcat 295593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 20532522 - 20532469
Alignment:
Q  150 ccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||| ||||||||||||||||| | ||||||||||||| ||| |||||||||||    
T  20532522 ccggagaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcat 20532469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 21429279 - 21429352
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||| || ||||||| |||||| || ||||||||  |||| ||||||||||||  |||||||||||    
T  21429279 agctccttccaaagacgtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcat 21429352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 1940910 - 1940850
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||||||||||||||||| ||| ||||| |||| || |||||||||| ||| |||||||||    
T  1940910 aggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacg 1940850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 3159597 - 3159529
Alignment:
Q  135 cttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||| |||||||| |||||||| |||||| | | ||| ||||||||| ||| |||||||||||    
T  3159597 cttccaaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcat 3159529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 3574582 - 3574506
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| |  ||||||||||||||| ||||| |||  |||||||  ||| |||||||||||    
T  3574582 aggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgcgcat 3574506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 38075408 - 38075484
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| |||||||||||| |||| ||| |||||||| |||||||||  ||| | ||||||| ||| |||||||||||    
T  38075408 aggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcat 38075484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 14858691 - 14858761
Alignment:
Q  132 ctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||||| |||| |||||||| ||||| |||| ||| ||| ||| | |||||||||||||||    
T  14858691 ctccttccaaggatgtacccggagaataccgggttcggttcccagggggatcaa-gcttgaccagtgcgcat 14858761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 34667738 - 34667695
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgat 170  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||    
T  34667738 aggagctccttccaaggacgtacccggggaataccgggttcgat 34667695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 41339531 - 41339460
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtg 198  Q
    |||||||||||||||||| ||| |||| |||||||| |||||| ||| | | ||||||||| ||| ||||||    
T  41339531 aggagctccttccaaggacgtacccggagaataccgggttcgactcccaaggggaacaacgcttggccagtg 41339460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 27531793 - 27531747
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcc 173  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||||    
T  27531793 aggagctccttccaaggacgtacccagggaataccgggttcgattcc 27531747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 36262898 - 36262831
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    ||||||||||||||| ||| |||| |||||||| |||||||||| ||  ||||||||| ||| |||||||    
T  36262898 agctccttccaaggacgtacccggagaataccgggttcgattcccag--ggaacaacgcttggccagtgc 36262831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 55005440 - 55005366
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||| || ||||| ||| |||||||| ||||||||  ||| | ||||||| ||||||| |||||||    
T  55005440 gagctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcat 55005366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 43458591 - 43458664
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| ||||||||| ||||  ||||||||| |  ||||||||| |||||||| |||| ||| |||||||||||    
T  43458591 agctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcat 43458664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 5472984 - 5472908
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| || |||||| ||||||||||||||||  ||| |||||  ||| | ||||||| ||| |||||||||||    
T  5472984 aggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcat 5472908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 6032776 - 6032736
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttc 167  Q
    |||||||||||||||||| ||| ||||||||||||| ||||    
T  6032776 aggagctccttccaaggacgtacccggggaataccgggttc 6032736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 6779186 - 6779262
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||| |||||||||| ||| | || |||||||| |||||||||| ||| ||||||||   || |||||||||||    
T  6779186 aggagcttcttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgcat 6779262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 6100446 - 6100522
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| |||||| ||||||||||||||||| |||||||||| ||||||||||||| ||| |||||||||||    
T  6100446 aggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcat 6100522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 10927580 - 10927656
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||| ||| |||||| ||| ||||||||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  10927580 aggagcttctttcaaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcat 10927656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 2467254 - 2467178
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| | ||| ||||||||  ||| |||||||||||    
T  2467254 aggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcat 2467178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 17981415 - 17981491
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||||| ||| ||||||||  |||||||||| ||||    
T  17981415 aggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcat 17981491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 38922550 - 38922474
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||  ||||||||| ||| |||||||||||    
T  38922550 aggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcat 38922474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 3418649 - 3418573
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||| |||||||| || ||||||||  |||||||||||||  ||| |||||||||||    
T  3418649 aggagctccttccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgcgcat 3418573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 13085498 - 13085574
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||  ||  ||||||||||||  |||||| ||||    
T  13085498 aggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgcat 13085574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 14666207 - 14666131
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||| ||| | ||||||  ||| |||||||||||    
T  14666207 aggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcat 14666131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 1013113 - 1013043
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagt 197  Q
    |||||||  ||||||||| ||||||||||||||||| |||||||||| ||| ||||||||| ||| |||||    
T  1013113 aggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagt 1013043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 8141076 - 8141152
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||| |||||||||| |||| |||||||||||| |||||||| | ||| | ||||||| ||| |||||||||||    
T  8141076 aggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcat 8141152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 44893414 - 44893338
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||| ||| ||||| ||||||| | ||| |||||| ||||    
T  44893414 aggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgcat 44893338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 45521143 - 45521218
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| || ||||||||||||| ||||||||||||| |||||||||| ||| ||||||||  |||| ||||||||||    
T  45521143 aggagttcattccaaggatgtacccggggaataccgggttcgattcccagg-ggaacaacacttgatcagtgcgcat 45521218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 9860130 - 9860055
Alignment:
Q  129 gagctccttccaaggatgtatccgggg-aataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||| ||| ||||||||  ||| |||||| ||||    
T  9860130 gagctccttccaaggacgtatccgggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcat 9860055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 24837216 - 24837287
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtg 198  Q
    |||||||||||||||| | ||| ||||||||||||| |||||||||| |||  |||||||| ||| ||||||    
T  24837216 aggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtg 24837287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 34613912 - 34613838
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||    |||||||||||||| || |||||||||| |||||||||||||| || ||||| |||||    
T  34613912 gagctccttccaaaaccgtatccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtacgcat 34613838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 583788 - 583862
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||| |||||||||| |||  || | ||||||| |||||||||||||  ||||||||| |||||||||||||||    
T  583788 aggagctacttccaaggacgtactcgagaaataccgggttcgattcctag--ggaacaacgcttgaccagtgcgcat 583862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 2964053 - 2964110
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    ||||||||||||| | ||| ||||||||||||| |||||||||| | |||||||||||    
T  2964053 agctccttccaagaacgtacccggggaataccgtgttcgattccgatgaggaacaacg 2964110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 8997680 - 8997604
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||| |||||| ||||||  ||| |||||||||||| |||||||||||| | ||||||||||||  ||||| |||||    
T  8997680 aggaactcctttcaaggacatattcggggaataccgtgttcgattcctaaggggaacaacgtttcgccagttcgcat 8997604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 13358996 - 13359072
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| ||||| |||||  ||||||| |||||||||  || |||||||||| |||  ||||||||||    
T  13358996 aggagctccttccaaagatgtgtccggaaaataccgggttcgattctcagaaggaacaacgcttggacagtgcgcat 13359072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 15884691 - 15884616
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| | ||||||||||| |||||||||| ||| ||||||||  ||| | |||||||||    
T  15884691 aggagctccttccaaggacgtacctggggaataccgggttcgattcccagg-ggaacaacacttggcaagtgcgcat 15884616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 18373984 - 18374060
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| |||||| ||| |||||||| ||||||  |||||||||  |||  |||||||| |||||||||||||||    
T  18373984 aggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcat 18374060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 44031576 - 44031505
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtg 198  Q
    |||| ||||||||||||||||| ||||| |||| || |||||||| | ||| ||||||||| ||| ||||||    
T  44031576 aggaactccttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtg 44031505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 68234 - 68164
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagt 197  Q
    |||||||||||||||||| ||   ||||||| | || |||||||||  ||||||||||||||||| |||||    
T  68234 aggagctccttccaaggacgtgctcggggaagatcgggttcgattctcaggaggaacaacgtttggccagt 68164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 7673790 - 7673729
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttg 191  Q
    |||||||||||||||||| ||||| |||||||| | ||||||||   |||| |||||||||||||    
T  7673790 aggagctccttccaaggacgtatctggggaatatcaagttcgat---tagggggaacaacgtttg 7673729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 6042818 - 6042871
Alignment:
Q  150 ccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||| |||||||||| | | ||||||||| ||| |||||||||||    
T  6042818 ccggggaataccgggttcgattcccaaggggaacaacgcttggccagtgcgcat 6042871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 22276614 - 22276557
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaac 186  Q
    |||||||||||||||| ||| || |  ||||||| |||| ||||||||||||||||||    
T  22276614 gagctccttccaaggacgtacccagaaaataccgggttctattcctaggaggaacaac 22276557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 11785890 - 11785953
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttg 191  Q
    |||||||| ||||||||| ||| |||||||||||||  ||||||||| ||| ||| |||||||||    
T  11785890 aggagctcattccaaggacgtacccggggaataccggattcgattccaagg-ggagcaacgtttg 11785953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 22810054 - 22810129
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||||||| ||| | || ||||||||||  || ||||||||| |||  ||||||||||    
T  22810054 aggagctccttccaaggacgtatccggagaacatcgggttcgattccctgg-ggaacaacgcttggtcagtgcgcat 22810129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 33401935 - 33401859
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| |||||| |||  |||||||||||| ||||||||   ||| ||||||||  |||||||||| ||||    
T  33401935 aggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcat 33401859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 33935871 - 33935795
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||  ||||||||| ||  |||||||||  |||||||||||||  |||||||  ||| |||||||||||    
T  33935871 aggagctccttttaaggatgtacccaaggaataccggattcgattcctagggagaacaacacttggccagtgcgcat 33935795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 43032875 - 43032951
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| |||||||||  ||||||| ||| |||| ||  ||||||||| ||| ||||||||| ||| |||||||||||    
T  43032875 aggagttccttccaaaaatgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcat 43032951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 1898972 - 1899048
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||| ||| |||||||||||    
T  1898972 aggagctccttccaaggatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcat 1899048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 5732056 - 5731980
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||| ||| |||||||||||    
T  5732056 aggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcat 5731980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 12704985 - 12705061
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||    
T  12704985 aggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcat 12705061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 9812843 - 9812919
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||| ||| |||||| ||||    
T  9812843 aggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcat 9812919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 42086298 - 42086374
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| ||||||||| |||||||||||||||    
T  42086298 aggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcat 42086374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 7866552 - 7866628
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||| ||||||||| |||||||||| ||||||||||||| ||| |||||| ||||    
T  7866552 aggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcat 7866628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 19572695 - 19572771
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||| ||| ||||||||  ||| |||||||||||    
T  19572695 aggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcat 19572771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 25417319 - 25417243
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||  |||||||||||| |||||||||| ||| ||||||||| ||| |||||||||||    
T  25417319 aggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcat 25417243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 1538402 - 1538478
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||| |||| |||| |||||||||||| |||||||||| ||| ||||||||  ||| |||||||||||    
T  1538402 aggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 1538478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 8513490 - 8513562
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||||| | ||||| | ||| |||||||    
T  8513490 aggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgc 8513562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 12766102 - 12766178
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||  ||||||||||| | ||| |||||| ||||    
T  12766102 aggagctccttccaaggacgtacccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgtgcat 12766178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 20525809 - 20525885
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||| ||| ||||||||  ||  |||||||||||    
T  20525809 aggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcat 20525885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 28857099 - 28857175
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| | | ||||||||||||| |||||||||| ||| ||||||||  ||| |||||||||||    
T  28857099 aggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 28857175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 30349550 - 30349626
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| |||||||||||| ||||||||||||||||| ||| |||| ||||| ||||||| | ||| |||||||||||    
T  30349550 aggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgcat 30349626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 41163595 - 41163524
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||| | ||| ||||||||||||| |||||||||| ||| ||||||||||||| |||||||    
T  41163595 aggagctccttccaagaacgtacccggggaataccgggttcgattcccagg-ggaacaacgtttggccagtgc 41163524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 31890072 - 31890133
Alignment:
Q  137 tccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||  ||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  31890072 tccaaggatgtatt-gggaaataccgaattcgatttctaggaggaacaacgtttgaccagtgc 31890133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 11845937 - 11845861
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||| | |||| || |||||||| | ||| ||||||||||||| |||||||||||    
T  11845937 aggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcat 11845861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 21487588 - 21487664
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| ||||||  || |||||| |||||||||||   ||||||||||||||||| | |||||||||    
T  21487588 aggagctccttccaatgatgtactcgaggaatatcgagttcgattttcaggaggaacaacgtttggctagtgcgcat 21487664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 3654046 - 3653974
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||| ||||||||| ||| |||| |||||||| |||||||||||||   |||||||| |||||||||||||||    
T  3654046 gagctctttccaaggacgtacccggagaataccgggttcgattcctag--agaacaacgcttgaccagtgcgcat 3653974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 9168383 - 9168313
Alignment:
Q  132 ctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||| || |||||||||||||||||||  ||||||| | ||||||||||| ||| |||||||||||    
T  9168383 ctccttccaaagacgtatccggggaataccgagaacgattccca-gaggaacaacgcttggccagtgcgcat 9168313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 18136416 - 18136357
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaac 186  Q
    ||||||||||||||| || |||||||| |||||||| |||||||||| ||| ||||||||    
T  18136416 aggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaac 18136357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 6767187 - 6767137
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctagg 177  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||| ||||    
T  6767187 aggagctccttccaaggacgtacccggggaataccgggttcgattcatagg 6767137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 12081885 - 12081955
Alignment:
Q  133 tccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||| ||||| ||||||||||||||| | |||||||||  ||| ||||||||| ||| |||||||||||    
T  12081885 tccttcaaaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcat 12081955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 23247487 - 23247417
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagt 197  Q
    |||||||| ||||||||| ||| | |||||||| || |||||||||| ||||||||||||| |||| ||||    
T  23247487 aggagctcattccaaggacgtacctggggaatatcgggttcgattcccaggaggaacaacgcttgatcagt 23247417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 35813131 - 35813058
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| ||||||||| ||| ||| ||||||||| |||||||||||||| | || || | |||||||||||||||    
T  35813131 agctcattccaaggacgtacccgaggaataccgggttcgattcctaggggaaataatgcttgaccagtgcgcat 35813058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 14588753 - 14588677
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||| ||| |||||| ||||| |||||||| || ||||||||   |||||||| |||| |||||||||||||||    
T  14588753 aggagcttctttcaaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcat 14588677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 35403648 - 35403572
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||  |||| ||||||| |||||||||  ||| ||||||||| ||| ||| |||||||    
T  35403648 aggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgcgcat 35403572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 167
Target Start/End: Original strand, 15034048 - 15034086
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttc 167  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  15034048 gagctccttccaaggatgtacccggggaataccgggttc 15034086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 28856948 - 28856994
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcc 173  Q
    |||||||||||||||||| | | ||||||||||||| ||||||||||    
T  28856948 aggagctccttccaaggacgcacccggggaataccgggttcgattcc 28856994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 35561952 - 35561878
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||| || |||||||||||||| ||||||||| | | ||  ||||||||   ||||||||||||||    
T  35561952 gagctccttccaatgacgtatccggggaatatcgagttcgacttccagagggaacaacacctgaccagtgcgcat 35561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 14152021 - 14152066
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattc 172  Q
    ||||||||||||||| |||||| | ||||||||||| |||||||||    
T  14152021 aggagctccttccaatgatgtacctggggaataccgggttcgattc 14152066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 9805003 - 9805051
Alignment:
Q  155 gaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| |||||||||| ||| ||||||||| ||| |||||||||||    
T  9805003 gaataccgggttcgattcccagggggaacaacgcttggccagtgcgcat 9805051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 13664231 - 13664307
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||||  ||||||||||  |||||||   ||| ||||||||  ||| |||||||||||    
T  13664231 aggagctccttccaaggacgtatctagggaataccggattcgattatcagggggaacaacacttggccagtgcgcat 13664307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 16755032 - 16755108
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| |||||| || ||||||||||||||| | ||||||||   ||||| ||||||  ||| |||||||||||    
T  16755032 aggagctctttccaaagacgtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgcgcat 16755108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 17693469 - 17693409
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||||| ||||||||||| |||  |||||| ||||| |||| ||||| |||||||||||||    
T  17693469 aggagccccttccaaggacgtactcggggagtaccgggttcaattcccaggaggaacaacg 17693409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 20692906 - 20692974
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagt 197  Q
    ||||| |||||||||| ||| ||||||||||||| ||| |||||||||  | ||||||| ||| |||||    
T  20692906 gagcttcttccaaggacgtacccggggaataccgggtttgattcctagaggaaacaacgcttggccagt 20692974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 30995092 - 30995168
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||   ||||||||||  |||||||||| ||| ||||||||  ||| |||| ||||||    
T  30995092 aggagctccttccaaggacgtacatggggaataccaggttcgattcccagggggaacaacacttggccagggcgcat 30995168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 36783219 - 36783291
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||| ||||| |||||||||||  ||||||||| |  |||||||||||||| | ||| | |||||||||||||    
T  36783219 aggatctcctgccaaggatgtactcggggaatatcaggttcgattcctaggggaaacgatgtttgaccagtgc 36783291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 38297100 - 38297024
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||| |||||||||   | ||||||||| |||| ||||| | | |||||||||||||  ||||||||||    
T  38297100 aggagctccttctaaggatgtacttgaggaataccgggttcaattcccaaggggaacaacgtttggtcagtgcgcat 38297024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 38897854 - 38897779
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| || |||||| ||||  ||||||||||| |||||||| | ||| ||||||||| ||| |||||||||||    
T  38897854 aggagctctttacaaggacgtatatggggaataccgggttcgatttccagg-ggaacaacgcttggccagtgcgcat 38897779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 5855493 - 5855569
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||| ||| |||||||||||    
T  5855493 aggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcat 5855569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 9853414 - 9853338
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||||||| ||||  ||||||| |||||||||||||| | |||||||||| ||||||||||||    
T  9853414 aggagctccttccaaggatgtacccggaaaataccgggttcgattcctaggggaaacaacgttttaccagtgcgcat 9853338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 11398025 - 11397953
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcg 200  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||| ||| ||||||||||||| ||| ||||    
T  11398025 aggagctccttccaaggatgtatccggagaataccgggttcgattccgagg-ggaacaacgtttggccaatgcg 11397953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 10422759 - 10422835
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| || |||| |||||||||||| |||||||| ||||||||||||||  ||| |||||||||||    
T  10422759 aggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcat 10422835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 16956437 - 16956513
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| ||||| |||  ||| | |||||||||||||||||||||||    
T  16956437 aggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcat 16956513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 34334432 - 34334356
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||| ||| ||||||||  ||| |||||||||||    
T  34334432 aggagctcattccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 34334356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 45362019 - 45361943
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||  ||||||||||||| ||| |||||||||||    
T  45362019 aggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcat 45361943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 50503498 - 50503422
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| |||||| |||||||||||||| || |||||||||| ||| ||||||||  |||||||||||||||    
T  50503498 aggagctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcat 50503422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 6563412 - 6563484
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||||||||| |||  ||| |||| |||||||||||||| ||||||||| ||| |||||||    
T  6563412 aggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgc 6563484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 34877961 - 34878037
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||| ||||||||||| |||| |||||||||||  |||||||||||||| ||||||||  ||| |||||||||||    
T  34877961 aggagcaccttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgcgcat 34878037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 41663993 - 41663917
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||| ||| ||||||||  |||  ||||||||||    
T  41663993 aggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcat 41663917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 48798207 - 48798131
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| || |||||||||||||| || |||||||| | ||| ||||||||| ||||| |||||||||    
T  48798207 aggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcat 48798131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 49078085 - 49078161
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||| ||| | ||||||  ||| |||||||||||    
T  49078085 aggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcat 49078161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 892434 - 892375
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaac 186  Q
    ||||||||||| |||||| |||| |||||||||||| |||||||||||||| ||||||||    
T  892434 aggagctcctttcaaggacgtattcggggaataccgggttcgattcctagggggaacaac 892375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 47313029 - 47312963
Alignment:
Q  133 tccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcg 200  Q
    |||||||||||| ||||| ||||||||||| ||| |||||||||| ||||||||||||| ||||||||    
T  47313029 tccttccaaggacgtatctggggaataccgggtttgattcctagg-ggaacaacgtttggccagtgcg 47312963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 51437442 - 51437516
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||| |||||| ||||||| |||||| || |||||||||| | | ||||||||| |||||||||||||||    
T  51437442 gagctcctttcaaggacgtatccgaggaatatcgggttcgattcccatggggaacaacgcttgaccagtgcgcat 51437516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 8763962 - 8764038
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| |||||||||| || ||||| |||| ||| ||||||||  ||| |||||||||||    
T  8763962 aggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcat 8764038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 9659315 - 9659240
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| ||| ||||| |||  |||||||||||| |||||||||| ||| ||||||||||||||| |||||||||    
T  9659315 aggagctcattctaaggacgtactcggggaataccgggttcgattcccagg-ggaacaacgtttgactagtgcgcat 9659240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 10336487 - 10336563
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| || |||||||| ||||| || ||||||||   ||| ||||||||| |||||||||||||||    
T  10336487 aggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcat 10336563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 18915838 - 18915914
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||| |||||||||| ||| ||||||||||||| |||||||||| ||| ||||||||  ||| |||||| ||||    
T  18915838 aggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcat 18915914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 33418252 - 33418176
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| || ||| |||| ||||||||  ||||||||||||| || |||||| ||| |||||||||||    
T  33418252 aggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgcat 33418176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 37339795 - 37339867
Alignment:
Q  132 ctccttccaaggatgtatccggggaataccgagttcgattccta-ggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | || || |||||| ||| |||||||||||    
T  37339795 ctccttccaaggatgtacccggggaataccgggttcgattcccagggggggacaacgcttggccagtgcgcat 37339867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 18649487 - 18649413
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| ||||| || ||||| || ||||||||   ||| ||||||||| |||||||||||||||    
T  18649487 gagctccttccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcat 18649413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 40288614 - 40288544
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagt 197  Q
    |||||||| ||||||||| |||| |||||||||||| |||||||| | ||| ||||||||| ||| |||||    
T  40288614 aggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagt 40288544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 41743244 - 41743290
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcc 173  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  41743244 aggagctccttccaaggacgtatccgaggaataccgggttcgattcc 41743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 2981068 - 2980992
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||| ||| ||||||||||||||| | |||||||||| ||  ||||||||  ||| |||||| ||||    
T  2981068 aggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcat 2980992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 14254405 - 14254329
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||| ||| ||||||||| |||| |||||||||||||||||||||   ||| ||||||||| ||| ||||| |||||    
T  14254405 aggaactcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcat 14254329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 16263528 - 16263592
Alignment:
Q  139 caaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||| ||||| ||||||||||  |||||||| | ||||||||||||| ||| |||||||||||    
T  16263528 caaggacgtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcat 16263592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 33004152 - 33004076
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||||||||||||| ||  ||||||| | ||| | ||||| | ||| |||||||||||    
T  33004152 aggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcat 33004076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 34719747 - 34719823
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| | ||||||||| | |||||||||| |   |||| |||| |||||||||||||||    
T  34719747 aggagctccttccaaggacgtacctggggaatactgggttcgattcccactgggaataacgcttgaccagtgcgcat 34719823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 43959954 - 43959882
Alignment:
Q  131 gctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| || ||| |||||||||| || |||| ||||| ||| ||||||||| ||| |||||||||||    
T  43959954 gctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcat 43959882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 32844 - 32902
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||||||||||||||| ||| | |||||||| || || ||||||| |||||||||||||    
T  32844 gagctccttccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacg 32902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 2567247 - 2567291
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgatt 171  Q
    |||||||||||||||||| |||| ||| |||||||| ||||||||    
T  2567247 aggagctccttccaaggacgtattcggagaataccgggttcgatt 2567291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 8905287 - 8905212
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| || |||||||| ||||| || || ||||| | ||| ||||||||| ||| |||||||||||    
T  8905287 aggagctccttccaatgacgtatccggagaatatcgggtacgatttcaagg-ggaacaacgcttggccagtgcgcat 8905212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 17358608 - 17358532
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| || |||||| ||||  ||||||||||| |||||||||  |||  |||||||| ||||||| |||||||    
T  17358608 aggagctcatttcaaggacgtatttggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcat 17358532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 17642141 - 17642065
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||| ||| ||| || || ||||| | |||||||||| ||| ||||||||  ||| |||||||||||    
T  17642141 aggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgcgcat 17642065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 26325783 - 26325859
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| |||||| ||||||| |||||| || |||||||||| ||  ||||||||  |||  ||||||||||    
T  26325783 aggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcat 26325859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 31152687 - 31152731
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgatt 171  Q
    |||||||| ||||||||||||| || |||||||||| ||||||||    
T  31152687 aggagctctttccaaggatgtacccagggaataccgggttcgatt 31152731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 31734260 - 31734335
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||| ||||||||||||||| ||| ||||||| |  ||||||| ||||| | ||||||| ||| |||||||||||    
T  31734260 aggagcaccttccaaggatgtacccgaggaatactggattcgatt-ctaggggaaacaacgattggccagtgcgcat 31734335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 3e-19; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 319395 - 319471
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||| ||||| ||||||||| ||| |||||||||||    
T  319395 aggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcat 319471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 412160 - 412102
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||||    
T  412160 gagctccttccaaggacgtatccggggaataccgagttcgattcacagggggaacaacg 412102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 543 - 619
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||  ||| ||||||||  |||| ||||| ||||    
T  543 aggagctccttccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcat 619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 4195338 - 4195262
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| | |||||||||||| |||| | |||||||||    
T  4195338 aggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcat 4195262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 5039554 - 5039495
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaac 186  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  5039554 aggagctccttccatagatgtattcggggaataccgagttcgattcctaggaggaacaac 5039495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 10048012 - 10047937
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgca 202  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||  ||| ||||||||||    
T  10048012 aggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgca 10047937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 21190914 - 21190840
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||||  |||||||||||||||| |||||||||||||||||| ||||| ||| | |||||||||    
T  21190914 gagctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcat 21190840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 18785645 - 18785718
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||  ||| |||||||||||    
T  18785645 agctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcat 18785718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 1797433 - 1797509
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||| ||| | ||||||| ||| |||||||||||    
T  1797433 aggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcat 1797509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 22993503 - 22993427
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| |||||||||| || |||||||||| ||||||||||||| ||| |||||| ||||    
T  22993503 aggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcat 22993427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 34659199 - 34659275
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||  | | ||||||||| |||||||||||||||    
T  34659199 aggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcat 34659275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 43862108 - 43862032
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| |||||| || ||||| ||||||||||| |||||||||| ||| ||||||||||||| |||||||||||    
T  43862108 aggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcat 43862032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 47341849 - 47341925
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||| ||| ||||||||  ||| |||||||||||    
T  47341849 aggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcat 47341925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 48804656 - 48804732
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| | | ||||||||  ||| |||||||||||    
T  48804656 aggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcat 48804732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 16802098 - 16802169
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcg 200  Q
    |||||||||||||||| ||| |||||||||||||  |||||||| |||||||||||||| ||| ||||||||    
T  16802098 gagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcg 16802169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 17748515 - 17748442
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||| |||||||||| |||| |||||||||||| |||||||||| ||| ||||||||| ||| |||||||||||    
T  17748515 agcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcat 17748442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 34127756 - 34127696
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||| ||||||||||||| ||| ||||||||||||| |||||||||| |||||||||||||    
T  34127756 aggaactccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacg 34127696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 43925485 - 43925561
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||| ||| ||||||||  |||  ||||||||||    
T  43925485 aggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcat 43925561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 29151940 - 29151989
Alignment:
Q  154 ggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  29151940 ggaataccgggttcgattcccaggaagaacaacgtttgaccagtgcgcat 29151989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 42032072 - 42032141
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    ||||||||||||||| ||| ||||||||||||  |||||||||| | | ||||||||||||| |||||||    
T  42032072 agctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgc 42032141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 13095831 - 13095907
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||| |||||| ||| ||||||||||||| |||| ||||| ||| ||||||||  ||| |||||||||||    
T  13095831 aggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcat 13095907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 14650290 - 14650362
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||||| ||| |||| ||||| || |||||||| | ||||||||||| | |||||||||||    
T  14650290 aggagctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgc 14650362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 22268165 - 22268089
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| ||||||||| |||   ||||||||||| |||||||||| ||| |||||||| |||| |||||||||||    
T  22268165 aggagctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgcgcat 22268089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 22973940 - 22974016
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| |||  |||||||||||| |||||||||  ||| ||||||||| ||| |||||| ||||    
T  22973940 aggagctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcat 22974016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 38578995 - 38578927
Alignment:
Q  135 cttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||| ||| |||||||||| || |||||||||| ||| ||||||||| ||| |||||||||||    
T  38578995 cttccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcat 38578927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 9685712 - 9685771
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaac 186  Q
    |||||||||||||||| | |||||||||||||| || |||||||||  ||||||||||||    
T  9685712 aggagctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 9685771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 365115 - 365189
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||  | ||||||| ||||||||| |||||||||  ||||||||||||| || | ||||||||||    
T  365115 gagctccttccaaaaacgtatccgaggaataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcat 365189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 1605914 - 1605986
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||||| ||| |||| |||||||  |||||||| | ||| ||||||||| ||| |||||||    
T  1605914 aggagctccttccaaggacgtacccggagaatacctggttcgatttccagggggaacaacgcttggccagtgc 1605986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 29805575 - 29805500
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||| ||||| |||||| |||| ||| |||||||||||||||||| || | |||||||||||||  ||||||||||    
T  29805575 aggagatcctttcaaggacgtattcggagaataccgagttcgattcatatg-ggaacaacgtttggtcagtgcgcat 29805500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 42210398 - 42210322
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| ||||||||| ||||||| |||||||||  ||||||||| ||    ||||||||||| |||||||||||    
T  42210398 aggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcat 42210322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 4228887 - 4228818
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||||| ||||||| ||||||||  |||||||| |    |||||||||||||| |||||||    
T  4228887 aggagctccttccaaggacgtatccgaggaataccaggttcgatttc---caggaacaacgtttggccagtgc 4228818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 39474912 - 39474989
Alignment:
Q  127 aggagctccttccaaggatgtatccgggga-ataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||| |||||| || ||||||||||  |||||| |||||||||||| | ||||||||| |||  ||||||||||    
T  39474912 aggagctctttccaaagacgtatccgggggtataccgggttcgattcctatggggaacaacgcttggtcagtgcgcat 39474989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 4973246 - 4973170
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||| ||||||||||  ||| ||||||||| || |||||||||||| | |||| |||  ||||||| |||||||    
T  4973246 aggagcttcttccaaggacttattcggggaatatcgggttcgattcctacggggaataacacttgaccaatgcgcat 4973170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 5069951 - 5069891
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    ||||||| |||| ||||| ||| ||||| ||||||| |||||||| | |||||||||||||    
T  5069951 aggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacg 5069891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 36619390 - 36619314
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||| |||||| |||||| ||||  ||||||||||| |||||||||| ||| ||||||||  ||| |||||| ||||    
T  36619390 aggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcat 36619314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 95115 - 95041
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||| | ||||||||||||||||  |||||||| ||||||  |||||||||||||||||||||||    
T  95115 aggagctccttccaagaaagtatccggggaataccaggttcgatttctagga--aacaacgtttgaccagtgcgcat 95041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 18605 - 18677
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgc 199  Q
    |||||||||||||||||||||| |||  ||| |||| |||||||||||||| ||||||||| ||| |||||||    
T  18605 aggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgc 18677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 9818 - 9894
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||||||||| | |||||||||  ||||||| | ||| ||||||||| ||| |||||||||||    
T  9818 aggagctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcat 9894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 12646 - 12719
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| ||  ||||||||||||| |||||||||  ||||||||||||| ||| |||||| ||||    
T  12646 agctccttccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcat 12719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 8151 - 8223
Alignment:
Q  130 agctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||| | | ||||||||| ||| |||||||||||    
T  8151 agctccttccaaggacgtacccggggaataccgggttcgattcccaag-ggaacaacgcttggccagtgcgcat 8223  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 72606 - 72681
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||||| ||| ||||||| |||||||| | | | ||||||||| |||||||||||||||    
T  72606 aggagctccttccaaggacgtatcaggg-aataccgggttcgatttccaaggggaacaacgcttgaccagtgcgcat 72681  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 271210 - 271134
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||||||| ||| |||| ||||| || |||||||||| ||| ||||||||| |||  ||||||||||    
T  271210 aggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcat 271134  T

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Target: scaffold0209 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 12548 - 12622
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||| |||||||||| |||  || | ||||||| |||||||||||||  ||||||||| |||||||||||||||    
T  12548 aggagctacttccaaggacgtactcgagaaataccgggttcgattcctag--ggaacaacgcttgaccagtgcgcat 12622  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 68490 - 68550
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacg 187  Q
    |||||||||||||||||| ||| ||||| |||| || |||||||||| ||| |||||||||    
T  68490 aggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacg 68550  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 25918 - 25844
Alignment:
Q  129 gagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    |||||||||||||| | |||  ||||||||||   ||||||||||||||  |||||||| ||| |||||||||||    
T  25918 gagctccttccaagtacgtactcggggaatacaaggttcgattcctagggagaacaacgcttggccagtgcgcat 25844  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 9409 - 9479
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgattcctaggaggaacaacgtttgaccagt 197  Q
    ||||||||||| |||||| |||   ||||||||||| |||||||||| ||| ||||||||| ||| |||||    
T  9409 aggagctcctttcaaggacgtacttggggaataccgggttcgattcccagggggaacaacgcttggccagt 9479  T

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Target: scaffold0291 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 6851 - 6904
Alignment:
Q  150 ccggggaataccgagttcgattcctaggaggaacaacgtttgaccagtgcgcat 203  Q
    ||||||||||||| |||||||||| ||| ||||||||  ||| |||||||||||    
T  6851 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 6904  T

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Target: scaffold0332 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 15304 - 15348
Alignment:
Q  127 aggagctccttccaaggatgtatccggggaataccgagttcgatt 171  Q
    ||||||||||| |||||| ||| ||||||||||||| ||||||||    
T  15304 aggagctccttacaaggaagtacccggggaataccgggttcgatt 15348  T

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