View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3906_high_63 (Length: 220)
Name: NF3906_high_63
Description: NF3906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3906_high_63 |
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Alignment Details
Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 3246072 - 3245948
Alignment:
| Q |
1 |
ctggagatgaggtagcagaacgaggtgtaggaggaagtgcattgatacgaccagttattaatgccattcgatctgaacctctttcttgaatccttcttct |
100 |
Q |
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| T |
3246072 |
ctggagatgaggtagcagaacgaggtgtaggaggaagtgcattgatacgaccagttattaatgccattcgatctgaacctctttcttgaatccttcttct |
3245973 |
T |
|
| Q |
101 |
tctctcttctgtattgttgttgttg |
125 |
Q |
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||||||||||||||||||||||||| |
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| T |
3245972 |
tctctcttctgtattgttgttgttg |
3245948 |
T |
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