View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3906_high_66 (Length: 210)
Name: NF3906_high_66
Description: NF3906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3906_high_66 |
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Alignment Details
Target: chr5 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 25492122 - 25492269
Alignment:
| Q |
33 |
caaaacttggaagtgcgaagaaatcataatgaattattgacatcgtaaatatgttggcatccaactaaagtaacaatcacatgtagaagtctattaaata |
132 |
Q |
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| T |
25492122 |
caaaacttggaagtgcgaagaaatcataatgaattgctgacatcgtaactatgttggcatccaactaaagtaacaatcacgtgtagaagtctattaaata |
25492221 |
T |
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| Q |
133 |
tattaataataagagtaatgaaaagaagagtgcaaacaagagttggac |
180 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
25492222 |
tattaataataacagtaatgaaaagaagagtgcaaacaagagttggac |
25492269 |
T |
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