View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3906_low_24 (Length: 371)

Name: NF3906_low_24
Description: NF3906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3906_low_24
NF3906_low_24
[»] chr6 (35 HSPs)
chr6 (27-193)||(31849800-31849966)
chr6 (200-357)||(31849585-31849747)
chr6 (257-352)||(14936482-14936577)
chr6 (251-354)||(6068959-6069062)
chr6 (266-356)||(2830341-2830431)
chr6 (266-356)||(6330121-6330211)
chr6 (266-356)||(8099536-8099626)
chr6 (266-356)||(8383003-8383093)
chr6 (266-356)||(9644702-9644792)
chr6 (266-356)||(9650719-9650809)
chr6 (266-356)||(11572179-11572269)
chr6 (266-356)||(26602329-26602419)
chr6 (308-356)||(35031007-35031055)
chr6 (266-353)||(13853627-13853714)
chr6 (266-352)||(8417827-8417913)
chr6 (266-356)||(33052828-33052918)
chr6 (308-356)||(2830411-2830459)
chr6 (308-356)||(6330191-6330239)
chr6 (308-356)||(8099606-8099654)
chr6 (308-356)||(8382975-8383023)
chr6 (308-356)||(9644772-9644820)
chr6 (308-356)||(9650789-9650837)
chr6 (308-356)||(11572151-11572199)
chr6 (308-356)||(13853599-13853647)
chr6 (308-356)||(26602399-26602447)
chr6 (269-356)||(6143560-6143647)
chr6 (306-356)||(3788111-3788161)
chr6 (270-356)||(13043764-13043850)
chr6 (266-356)||(35031035-35031125)
chr6 (250-299)||(4251372-4251421)
chr6 (267-356)||(6068572-6068661)
chr6 (308-353)||(8417802-8417847)
chr6 (308-353)||(17992064-17992109)
chr6 (308-356)||(6068642-6068690)
chr6 (308-348)||(6549958-6549998)
[»] scaffold0171 (1 HSPs)
scaffold0171 (250-356)||(12371-12477)
[»] chr2 (51 HSPs)
chr2 (250-347)||(23227290-23227387)
chr2 (266-356)||(3055564-3055654)
chr2 (266-356)||(6648553-6648643)
chr2 (266-356)||(9047789-9047879)
chr2 (266-356)||(13197744-13197834)
chr2 (266-356)||(15896848-15896938)
chr2 (266-356)||(37990047-37990137)
chr2 (266-356)||(41478673-41478763)
chr2 (266-356)||(44397553-44397643)
chr2 (266-356)||(44398692-44398782)
chr2 (250-343)||(14740486-14740579)
chr2 (268-356)||(13344490-13344578)
chr2 (308-356)||(41492902-41492950)
chr2 (266-356)||(12337971-12338061)
chr2 (266-356)||(15372232-15372322)
chr2 (266-356)||(16243817-16243907)
chr2 (313-347)||(19274270-19274304)
chr2 (266-356)||(30099216-30099306)
chr2 (271-356)||(4683971-4684056)
chr2 (308-356)||(3055634-3055682)
chr2 (308-356)||(6648525-6648573)
chr2 (308-356)||(9047761-9047809)
chr2 (308-356)||(12337943-12337991)
chr2 (308-356)||(13197716-13197764)
chr2 (308-356)||(15372302-15372350)
chr2 (308-356)||(15896918-15896966)
chr2 (263-347)||(20900679-20900763)
chr2 (308-356)||(37990019-37990067)
chr2 (308-356)||(38917528-38917576)
chr2 (308-356)||(41478645-41478693)
chr2 (308-356)||(44398762-44398810)
chr2 (308-355)||(16243790-16243837)
chr2 (266-356)||(16044351-16044441)
chr2 (261-347)||(27279969-27280055)
chr2 (308-350)||(31951399-31951441)
chr2 (266-356)||(37666644-37666734)
chr2 (266-356)||(38917556-38917646)
chr2 (308-354)||(44397623-44397669)
chr2 (250-299)||(3243132-3243181)
chr2 (306-347)||(12170414-12170455)
chr2 (250-299)||(13952552-13952601)
chr2 (250-299)||(14093759-14093808)
chr2 (306-351)||(31680381-31680426)
chr2 (267-352)||(36688892-36688977)
chr2 (306-350)||(4553084-4553128)
chr2 (308-356)||(13344560-13344608)
chr2 (259-347)||(13724129-13724217)
chr2 (308-356)||(16044323-16044371)
chr2 (308-352)||(23227282-23227326)
chr2 (308-356)||(30099188-30099236)
chr2 (308-356)||(37666616-37666664)
[»] chr1 (42 HSPs)
chr1 (228-356)||(34042702-34042830)
chr1 (266-356)||(23278035-23278125)
chr1 (266-356)||(9981653-9981743)
chr1 (266-356)||(14984843-14984933)
chr1 (266-356)||(16448142-16448232)
chr1 (266-356)||(27159392-27159482)
chr1 (266-356)||(31842829-31842919)
chr1 (266-356)||(39402000-39402090)
chr1 (266-356)||(44668127-44668217)
chr1 (262-356)||(44955236-44955330)
chr1 (266-356)||(47216733-47216823)
chr1 (308-356)||(11897130-11897178)
chr1 (268-356)||(26471101-26471189)
chr1 (261-356)||(11897060-11897155)
chr1 (266-356)||(11795939-11796029)
chr1 (306-356)||(12483634-12483684)
chr1 (308-356)||(9981723-9981771)
chr1 (308-356)||(11796009-11796057)
chr1 (308-356)||(14984913-14984961)
chr1 (308-356)||(17556829-17556877)
chr1 (308-356)||(25694395-25694443)
chr1 (308-356)||(27159364-27159412)
chr1 (308-356)||(31842801-31842849)
chr1 (308-356)||(39401972-39402020)
chr1 (308-356)||(44668099-44668147)
chr1 (308-356)||(47777487-47777535)
chr1 (266-354)||(47777515-47777603)
chr1 (308-359)||(44955209-44955260)
chr1 (266-356)||(1050894-1050984)
chr1 (311-357)||(5392152-5392198)
chr1 (306-356)||(11989855-11989905)
chr1 (266-356)||(12213508-12213598)
chr1 (266-356)||(12483662-12483752)
chr1 (316-354)||(37552225-37552263)
chr1 (266-352)||(47588371-47588457)
chr1 (306-355)||(40676796-40676845)
chr1 (268-356)||(47969700-47969789)
chr1 (308-356)||(1050964-1051012)
chr1 (308-356)||(26471071-26471119)
chr1 (308-356)||(34042772-34042820)
chr1 (292-356)||(38791223-38791286)
chr1 (308-356)||(47216705-47216753)
[»] chr3 (56 HSPs)
chr3 (244-347)||(53275310-53275413)
chr3 (266-356)||(42170380-42170470)
chr3 (278-347)||(25394352-25394421)
chr3 (279-350)||(11508387-11508458)
chr3 (266-356)||(4238600-4238690)
chr3 (266-356)||(10297985-10298075)
chr3 (266-356)||(17653718-17653808)
chr3 (266-356)||(19557086-19557176)
chr3 (262-356)||(21295356-21295450)
chr3 (266-356)||(22721937-22722027)
chr3 (266-356)||(34080064-34080154)
chr3 (266-356)||(37508927-37509017)
chr3 (266-356)||(44785430-44785520)
chr3 (262-356)||(46208036-46208130)
chr3 (266-356)||(49823415-49823505)
chr3 (308-356)||(51406749-51406797)
chr3 (266-353)||(8817420-8817507)
chr3 (266-357)||(40691030-40691121)
chr3 (266-356)||(2787866-2787956)
chr3 (266-356)||(38964398-38964488)
chr3 (266-356)||(48340403-48340493)
chr3 (266-356)||(51406679-51406769)
chr3 (267-356)||(8437431-8437520)
chr3 (303-356)||(34080036-34080089)
chr3 (268-353)||(35513482-35513567)
chr3 (250-339)||(49687894-49687983)
chr3 (308-356)||(9111500-9111548)
chr3 (303-347)||(9582974-9583018)
chr3 (308-356)||(10298055-10298103)
chr3 (308-356)||(17653788-17653836)
chr3 (308-356)||(19557058-19557106)
chr3 (268-356)||(36095716-36095804)
chr3 (308-356)||(37508997-37509045)
chr3 (308-356)||(40691002-40691050)
chr3 (308-356)||(42507361-42507409)
chr3 (308-356)||(48340473-48340521)
chr3 (308-356)||(49823387-49823435)
chr3 (308-355)||(8817393-8817440)
chr3 (266-353)||(9111528-9111615)
chr3 (308-355)||(22722007-22722054)
chr3 (306-356)||(9213590-9213640)
chr3 (266-356)||(42507389-42507479)
chr3 (266-347)||(33942966-33943047)
chr3 (308-356)||(2131748-2131796)
chr3 (308-356)||(2787838-2787886)
chr3 (308-356)||(4238670-4238718)
chr3 (266-346)||(6013370-6013450)
chr3 (308-356)||(8437501-8437549)
chr3 (308-356)||(9027148-9027196)
chr3 (308-356)||(21295332-21295380)
chr3 (308-356)||(34988151-34988199)
chr3 (308-356)||(38964468-38964516)
chr3 (308-352)||(42170356-42170400)
chr3 (308-356)||(44785402-44785450)
chr3 (308-356)||(45652075-45652123)
chr3 (308-356)||(46208106-46208154)
[»] chr4 (52 HSPs)
chr4 (258-347)||(31013036-31013125)
chr4 (250-356)||(24393838-24393944)
chr4 (266-356)||(3372127-3372217)
chr4 (306-356)||(3904689-3904739)
chr4 (266-356)||(3992982-3993072)
chr4 (262-356)||(42797738-42797832)
chr4 (266-356)||(47833617-47833707)
chr4 (266-356)||(48336269-48336359)
chr4 (261-347)||(50430447-50430533)
chr4 (271-356)||(33551207-33551292)
chr4 (308-356)||(38160378-38160426)
chr4 (268-347)||(6422503-6422582)
chr4 (305-356)||(17236861-17236912)
chr4 (308-347)||(50430433-50430472)
chr4 (306-356)||(5986950-5987000)
chr4 (266-356)||(6121927-6122017)
chr4 (266-356)||(7579316-7579406)
chr4 (266-356)||(20538720-20538810)
chr4 (266-356)||(24704376-24704466)
chr4 (270-356)||(43900555-43900641)
chr4 (266-356)||(46797731-46797821)
chr4 (266-356)||(47838651-47838741)
chr4 (266-356)||(51894616-51894706)
chr4 (266-356)||(52756681-52756771)
chr4 (266-356)||(53337376-53337466)
chr4 (266-347)||(33621811-33621892)
chr4 (308-356)||(1716307-1716355)
chr4 (308-356)||(3422136-3422184)
chr4 (308-356)||(3993052-3993100)
chr4 (308-356)||(6121899-6121947)
chr4 (308-356)||(20538692-20538740)
chr4 (308-356)||(47833687-47833735)
chr4 (308-356)||(51894588-51894636)
chr4 (308-347)||(23226018-23226057)
chr4 (303-357)||(3079606-3079660)
chr4 (310-356)||(21892217-21892263)
chr4 (271-356)||(26231583-26231668)
chr4 (306-355)||(41615683-41615732)
chr4 (308-356)||(3372197-3372245)
chr4 (308-356)||(4780371-4780419)
chr4 (308-356)||(7579386-7579434)
chr4 (308-356)||(33621872-33621920)
chr4 (312-356)||(40913195-40913239)
chr4 (268-356)||(40913225-40913313)
chr4 (308-356)||(41469772-41469820)
chr4 (308-356)||(42797808-42797856)
chr4 (308-356)||(43900625-43900673)
chr4 (312-356)||(44900086-44900130)
chr4 (312-356)||(46797805-46797849)
chr4 (308-356)||(47838623-47838671)
chr4 (308-356)||(48336339-48336387)
chr4 (308-356)||(53337446-53337494)
[»] scaffold0204 (2 HSPs)
scaffold0204 (266-356)||(23791-23881)
scaffold0204 (308-356)||(23861-23909)
[»] chr8 (42 HSPs)
chr8 (266-356)||(54646-54736)
chr8 (266-356)||(2890196-2890286)
chr8 (266-356)||(3304312-3304402)
chr8 (266-356)||(6552661-6552751)
chr8 (266-356)||(7785812-7785902)
chr8 (266-356)||(12343174-12343264)
chr8 (266-356)||(12763688-12763778)
chr8 (266-356)||(15888386-15888476)
chr8 (274-356)||(28463617-28463699)
chr8 (266-356)||(31654619-31654709)
chr8 (266-356)||(32211397-32211487)
chr8 (266-356)||(43199388-43199478)
chr8 (267-356)||(8587176-8587265)
chr8 (308-356)||(32211369-32211417)
chr8 (229-356)||(32114472-32114599)
chr8 (266-356)||(7805733-7805823)
chr8 (266-356)||(39571237-39571327)
chr8 (266-356)||(44498221-44498311)
chr8 (308-356)||(54618-54666)
chr8 (308-356)||(2890168-2890216)
chr8 (308-356)||(6552731-6552779)
chr8 (308-356)||(7785784-7785832)
chr8 (308-356)||(32114481-32114529)
chr8 (308-356)||(33289267-33289315)
chr8 (308-356)||(39571209-39571257)
chr8 (308-359)||(12343143-12343194)
chr8 (308-351)||(13578933-13578976)
chr8 (308-355)||(33057670-33057717)
chr8 (266-356)||(25601034-25601124)
chr8 (266-356)||(33289295-33289385)
chr8 (267-356)||(17006917-17007006)
chr8 (267-356)||(17570241-17570330)
chr8 (316-353)||(27422274-27422311)
chr8 (308-356)||(3304284-3304332)
chr8 (268-356)||(7012177-7012265)
chr8 (308-356)||(7012247-7012295)
chr8 (308-356)||(7805705-7805753)
chr8 (308-356)||(12763660-12763708)
chr8 (308-356)||(25601006-25601054)
chr8 (308-356)||(31654689-31654737)
chr8 (308-356)||(43199360-43199408)
chr8 (308-356)||(44498193-44498241)
[»] chr7 (34 HSPs)
chr7 (266-356)||(1565763-1565853)
chr7 (266-356)||(1738481-1738571)
chr7 (266-356)||(7240755-7240845)
chr7 (266-356)||(23314173-23314263)
chr7 (266-356)||(31319433-31319523)
chr7 (266-356)||(38063947-38064037)
chr7 (266-356)||(46840866-46840956)
chr7 (268-356)||(28536787-28536875)
chr7 (266-356)||(94352-94442)
chr7 (270-356)||(7269443-7269529)
chr7 (266-356)||(7482231-7482321)
chr7 (266-352)||(9268766-9268852)
chr7 (266-356)||(22285705-22285795)
chr7 (266-356)||(36016230-36016320)
chr7 (266-356)||(36583401-36583491)
chr7 (306-347)||(958506-958547)
chr7 (308-356)||(1738453-1738501)
chr7 (308-356)||(7240825-7240873)
chr7 (308-356)||(7482301-7482349)
chr7 (308-356)||(9268832-9268880)
chr7 (308-356)||(22285775-22285823)
chr7 (308-356)||(33418452-33418500)
chr7 (308-356)||(38441536-38441584)
chr7 (308-356)||(46840936-46840984)
chr7 (266-356)||(4790254-4790344)
chr7 (266-356)||(38441466-38441556)
chr7 (308-356)||(94324-94372)
chr7 (308-356)||(4790324-4790372)
chr7 (308-352)||(7661152-7661196)
chr7 (312-356)||(23314145-23314189)
chr7 (308-356)||(31319405-31319453)
chr7 (308-352)||(36016206-36016250)
chr7 (308-356)||(36583471-36583519)
chr7 (308-352)||(38063923-38063967)
[»] chr5 (29 HSPs)
chr5 (266-356)||(9395356-9395446)
chr5 (266-356)||(37148989-37149079)
chr5 (266-356)||(582995-583085)
chr5 (266-356)||(11795174-11795264)
chr5 (266-356)||(13033057-13033147)
chr5 (266-356)||(13103030-13103120)
chr5 (266-352)||(23359952-23360038)
chr5 (266-356)||(36563572-36563662)
chr5 (266-356)||(41989441-41989531)
chr5 (308-356)||(6126900-6126948)
chr5 (308-356)||(9395426-9395474)
chr5 (308-356)||(13103100-13103148)
chr5 (308-356)||(17025700-17025748)
chr5 (308-356)||(23360018-23360066)
chr5 (308-356)||(36563544-36563592)
chr5 (308-356)||(41989413-41989461)
chr5 (262-353)||(4443969-4444060)
chr5 (313-356)||(11574161-11574204)
chr5 (266-356)||(17025630-17025720)
chr5 (308-354)||(36595782-36595828)
chr5 (270-347)||(3549585-3549662)
chr5 (308-356)||(11795244-11795292)
chr5 (308-356)||(13033127-13033175)
chr5 (308-356)||(20848150-20848197)
chr5 (308-356)||(21576022-21576070)
chr5 (268-356)||(26350386-26350474)
chr5 (306-346)||(35585322-35585362)
chr5 (308-356)||(37148961-37149009)
chr5 (308-356)||(37642030-37642078)
[»] scaffold1707 (1 HSPs)
scaffold1707 (266-355)||(1342-1431)
[»] scaffold0482 (2 HSPs)
scaffold0482 (266-356)||(12866-12956)
scaffold0482 (308-356)||(12936-12984)
[»] scaffold0464 (2 HSPs)
scaffold0464 (266-356)||(6165-6255)
scaffold0464 (308-356)||(6137-6185)
[»] scaffold0009 (2 HSPs)
scaffold0009 (266-356)||(49511-49601)
scaffold0009 (306-356)||(49579-49629)
[»] scaffold0017 (1 HSPs)
scaffold0017 (257-355)||(30032-30130)


Alignment Details
Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 27 - 193
Target Start/End: Complemental strand, 31849966 - 31849800
Alignment:
Q  27 tcgtatgtttccatttttggcaaatgacgtgaaatccattgaatcaattaacttctgatgacatgtgatatgatagtgtatgtgattgtaatctcatttg 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31849966 tcgtatgtttccatttttggcaaatgacgtgaaatccattgaatcaattaacttctgatgacatgtgatatgatagtgtatgtgattgtaatctcatttg 31849867  T
Q  127 gatgtcttgcaactagaatccataaatgcttctttccatgtcccttacatagaaagtctaagtataa 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31849866 gatgtcttgcaactagaatccataaatgcttctttccatgtcccttacatagaaagtctaagtataa 31849800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 200 - 357
Target Start/End: Complemental strand, 31849747 - 31849585
Alignment:
Q  200 agaacggaaatagaaacatcgatataatgaaatgctccctct------gcttctacttataataaacatttaggtcaacaaaaggtgatttatctggtta 293  Q
    ||||||||||||||||||||||||||||||||| ||||| ||      ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31849747 agaacggaaatagaaacatcgatataatgaaatactcccactccctccgcttctacttataataaacatttaggtcaacaaaaggtgatttatctggtta 31849648  T
Q  294 agaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggagt 357  Q
    || |||| ||||||||||||||| ||||||||||||| || |||||||||||||||||||||||    
T  31849647 ag-attcgtacaaaatacatcaacttttgttgacccatatgtctcttataaatatgaccggagt 31849585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 14936482 - 14936577
Alignment:
Q  257 aaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    |||||||||||||||||||||||||| ||||| ||||||||||  | | ||||||||||| | |||||||||||||||||||||||||||| ||||    
T  14936482 aaacatttaggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggacc 14936577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 6068959 - 6069062
Alignment:
Q  251 tataataaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatga 350  Q
    ||||| ||| ||||||||||||||||| |||  ||||  ||||| |||| | || |||||||| || ||||||||||| |||||||| ||||||||| ||    
T  6068959 tataagaaatatttaggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaatagga 6069058  T
Q  351 ccgg 354  Q
    ||||    
T  6069059 ccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 2830431 - 2830341
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  2830431 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 2830341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 6330211 - 6330121
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  6330211 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 6330121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 8099626 - 8099536
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  8099626 ggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 8099536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 8383003 - 8383093
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  8383003 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 8383093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 9644792 - 9644702
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  |||| |||||||| |||| ||||||||||||| ||||||||    
T  9644792 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggag 9644702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 9650809 - 9650719
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  |||| |||||||| |||| ||||||||||||| ||||||||    
T  9650809 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggag 9650719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 11572179 - 11572269
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  11572179 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 11572269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 26602419 - 26602329
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  26602419 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 26602329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 35031055 - 35031007
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  35031055 atacatcaatttttgttgacccaaaattctcttataaataggaccggag 35031007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 13853627 - 13853714
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccg 353  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| |||||    
T  13853627 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 13853714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 352
Target Start/End: Original strand, 8417827 - 8417913
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||    
T  8417827 ggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagacc 8417913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 33052828 - 33052918
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||| ||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  33052828 ggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 33052918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 2830411 - 2830459
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  2830411 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 2830459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 6330191 - 6330239
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  6330191 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 6330239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 8099606 - 8099654
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  8099606 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 8099654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 8383023 - 8382975
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  8383023 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 8382975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 9644772 - 9644820
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  9644772 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 9644820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 9650789 - 9650837
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  9650789 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 9650837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 11572199 - 11572151
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  11572199 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 11572151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 13853647 - 13853599
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  13853647 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 13853599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 26602399 - 26602447
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  26602399 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 26602447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 356
Target Start/End: Complemental strand, 6143647 - 6143560
Alignment:
Q  269 caacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| || |||||    
T  6143647 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggag 6143560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 3788111 - 3788161
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||||| ||||||||||| |||| | ||||||||||| ||||||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggag 3788161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 356
Target Start/End: Complemental strand, 13043850 - 13043764
Alignment:
Q  270 aacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||| |||| ||||| ||||| ||||||    ||||||||  ||||||||||||| |||| |||||||||||||  |||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggag 13043764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 35031035 - 35031125
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||  |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| | ||||||||||| ||||||||    
T  35031035 ggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggag 35031125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 4251421 - 4251372
Alignment:
Q  250 ttataataaacatttaggtcaacaaaaggtgatttatctggttaagaatt 299  Q
    |||||| ||||||||||||||| |||| ||||| ||||| ||||||||||    
T  4251421 ttataagaaacatttaggtcaataaaatgtgatgtatctagttaagaatt 4251372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 6068661 - 6068572
Alignment:
Q  267 gtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | |||| |||||| |||| | ||||||||||| ||||||||    
T  6068661 gtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggag 6068572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 8417847 - 8417802
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccg 353  Q
    ||||||||| |||||||||||||||  ||||||||||||| |||||    
T  8417847 atacatcaacttttgttgacccaaaattctcttataaataggaccg 8417802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 17992064 - 17992109
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccg 353  Q
    ||||||| |||||||||||||||||  ||||||||||||| |||||    
T  17992064 atacatcgatttttgttgacccaaaattctcttataaataggaccg 17992109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 6068642 - 6068690
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||| ||||  ||||||||||||| ||||||||    
T  6068642 atacatcaacttttgttgactcaaaattctcttataaataggaccggag 6068690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 6549958 - 6549998
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatat 348  Q
    ||||||||| ||||||| ||| |||||||||||||||||||    
T  6549958 atacatcaacttttgttaaccaaaatatctcttataaatat 6549998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 356
Target Start/End: Original strand, 12371 - 12477
Alignment:
Q  250 ttataataaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatg 349  Q
    |||||| ||||||| |||||||||||| ||||| |||||||||||||||| | || ||| ||| ||| |||| |||||| |||||||||||||||||| |    
T  12371 ttataagaaacattcaggtcaacaaaatgtgatgtatctggttaagaatttagaccaaacacaccaactttttttgaccaaaatatctcttataaatagg 12470  T
Q  350 accggag 356  Q
    |||||||    
T  12471 accggag 12477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 23227290 - 23227387
Alignment:
Q  250 ttataataaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    |||||| ||| |||||||||||||||| ||||| ||||||  ||||||||   || ||||||||||| ||||||||||| |||| |||||||||||||    
T  23227290 ttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggaccaaatacatcaacttttgttgaccaaaatgtctcttataaata 23227387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 3055654 - 3055564
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  3055654 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 3055564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 6648553 - 6648643
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  |||| |||||||| |||| ||||||||||||| ||||||||    
T  6648553 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggag 6648643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 9047789 - 9047879
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | |||| |||||| |||| ||||||||||||||||||||||    
T  9047789 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggag 9047879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 13197744 - 13197834
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  13197744 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 13197834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 15896938 - 15896848
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  15896938 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 15896848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 37990047 - 37990137
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  37990047 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 37990137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 41478673 - 41478763
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  41478673 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 41478763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 44397643 - 44397553
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  44397643 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 44397553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 44398782 - 44398692
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  44398782 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 44398692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 14740579 - 14740486
Alignment:
Q  250 ttataataaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttata 343  Q
    |||||| ||||||||| |||||| ||| ||||| ||||||||||| ||||   || |||||||| |  |||||||||| |||||||||||||||    
T  14740579 ttataagaaacatttaagtcaactaaatgtgatgtatctggttaaaaatttggacgaaatacattaccttttgttgacacaaatatctcttata 14740486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 13344578 - 13344490
Alignment:
Q  268 tcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||| |||| ||||| ||||| ||||||  | ||||||||  ||||||||||||| |||| |||||||||||||  |||||||    
T  13344578 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggag 13344490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 41492950 - 41492902
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  41492950 atacatcaacttttgttgacccaaatttctcttataaataggaccggag 41492902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 12337971 - 12338061
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  ||||||||||||| |||| | |||||||||||  |||||||    
T  12337971 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggag 12338061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 15372322 - 15372232
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||| ||||    
T  15372322 ggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggag 15372232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 16243817 - 16243907
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| | ||||||||||| ||||||||    
T  16243817 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggag 16243907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 347
Target Start/End: Complemental strand, 19274304 - 19274270
Alignment:
Q  313 tcaatttttgttgacccaaatatctcttataaata 347  Q
    |||||||||||||||||||||||||||||||||||    
T  19274304 tcaatttttgttgacccaaatatctcttataaata 19274270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 30099216 - 30099306
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| |||||  |||| ||||||  | ||||||||  ||||||||||||| |||| ||||||||||||| || |||||    
T  30099216 ggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggag 30099306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 356
Target Start/End: Original strand, 4683971 - 4684056
Alignment:
Q  271 acaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  4683971 acaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 4684056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 3055634 - 3055682
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  3055634 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 3055682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 6648573 - 6648525
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  6648573 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 6648525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 9047809 - 9047761
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  9047809 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 9047761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 12337991 - 12337943
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  12337991 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 12337943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 13197764 - 13197716
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  13197764 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 13197716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 15372302 - 15372350
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  15372302 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 15372350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 15896918 - 15896966
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  15896918 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 15896966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 347
Target Start/End: Complemental strand, 20900763 - 20900679
Alignment:
Q  263 ttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    ||||||||||||||  |||  ||||||||| | ||||   |||| ||||||||| ||||| |||||||||| |||||||||||||    
T  20900763 ttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatacatcaacttttgctgacccaaatgtctcttataaata 20900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 37990067 - 37990019
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  37990067 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 37990019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 38917576 - 38917528
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  38917576 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 38917528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 41478693 - 41478645
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  41478693 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 41478645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 44398762 - 44398810
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  44398762 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 44398810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 16243837 - 16243790
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccgga 355  Q
    ||||||||| |||||||||||||||  ||||||||||||| |||||||    
T  16243837 atacatcaacttttgttgacccaaaattctcttataaataggaccgga 16243790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 16044351 - 16044441
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||| |||| |||| ||||| ||||| ||||||    ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  16044351 ggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 16044441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 347
Target Start/End: Complemental strand, 27280055 - 27279969
Alignment:
Q  261 atttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    ||||||||||||||||| | || ||||||||||| |  | | || | ||||||||| |||| ||||||||||| |||| ||||||||    
T  27280055 atttaggtcaacaaaagttaatgtatctggttaaaacattagaccagatacatcaacttttcttgacccaaatgtctcctataaata 27279969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 31951441 - 31951399
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatga 350  Q
    ||||||||| |||| |||||| |||||||||||||||||||||    
T  31951441 atacatcaaattttattgaccaaaatatctcttataaatatga 31951399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 37666644 - 37666734
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||| |||| |||| ||||| ||||| ||||||    ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  37666644 ggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 37666734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 38917556 - 38917646
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | |||| |||||| |||| | ||||||||||| ||||||||    
T  38917556 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggag 38917646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 44397623 - 44397669
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccgg 354  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||    
T  44397623 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 44397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 3243132 - 3243181
Alignment:
Q  250 ttataataaacatttaggtcaacaaaaggtgatttatctggttaagaatt 299  Q
    |||||| |||||||||||||||| ||| ||||| ||||| ||||||||||    
T  3243132 ttataagaaacatttaggtcaactaaatgtgatgtatctcgttaagaatt 3243181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 347
Target Start/End: Complemental strand, 12170455 - 12170414
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    ||||||||||| |||||||||||||| | |||||||||||||    
T  12170455 aaatacatcaacttttgttgacccaagtttctcttataaata 12170414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 13952552 - 13952601
Alignment:
Q  250 ttataataaacatttaggtcaacaaaaggtgatttatctggttaagaatt 299  Q
    |||||| |||||||||||| |||||||  |||||||||| ||||||||||    
T  13952552 ttataagaaacatttaggttaacaaaatatgatttatcttgttaagaatt 13952601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 14093759 - 14093808
Alignment:
Q  250 ttataataaacatttaggtcaacaaaaggtgatttatctggttaagaatt 299  Q
    |||||| |||||||||||| |||||||  |||||||||| ||||||||||    
T  14093759 ttataagaaacatttaggttaacaaaatatgatttatcttgttaagaatt 14093808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 351
Target Start/End: Original strand, 31680381 - 31680426
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatgac 351  Q
    ||||||||||| ||||||| ||| |||||||||||||||| |||||    
T  31680381 aaatacatcaaattttgtttacctaaatatctcttataaaaatgac 31680426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 352
Target Start/End: Complemental strand, 36688977 - 36688892
Alignment:
Q  267 gtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    ||||||||||  |||| ||||| ||| | |||||| |||| |||||||||  |||||||||| || | ||||||||||||| ||||    
T  36688977 gtcaacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 4553084 - 4553128
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatga 350  Q
    ||||||||| ||||||||||||| || | ||||||||||||||||    
T  4553084 aaatacatctatttttgttgaccaaactttctcttataaatatga 4553128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 13344560 - 13344608
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||| |||||  ||||||||||||| ||||||||    
T  13344560 atacatcaacttttgttgatccaaaattctcttataaataggaccggag 13344608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 347
Target Start/End: Original strand, 13724129 - 13724217
Alignment:
Q  259 acatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    |||| |||||||||||||| |||| ||| ||||||| || |   || | ||||||||| |||||||||||  |||||| ||||||||||    
T  13724129 acatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccagaatatcgcttataaata 13724217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 16044371 - 16044323
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||| |||||||||||  ||||||||||||| ||||||||    
T  16044371 atacatcaactttagttgacccaaaattctcttataaataggaccggag 16044323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 23227326 - 23227282
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    ||||||||  ||||||||||| |||||| ||||||||||||||||    
T  23227326 atacatcacattttgttgacctaaatatttcttataaatatgacc 23227282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 30099236 - 30099188
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||| ||||||| ||||||||    
T  30099236 atacatcaacttttgttgacccaaaattctctaataaataggaccggag 30099188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 37666664 - 37666616
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||| |||||||||||  ||||||||||||| ||||||||    
T  37666664 atacatcaactttagttgacccaaaattctcttataaataggaccggag 37666616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 356
Target Start/End: Complemental strand, 34042830 - 34042702
Alignment:
Q  228 gaaatgctccctctgcttctacttataataaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgac 327  Q
    ||||| ||||||| | ||||| |||||| | |  ||| |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  ||||||||||||    
T  34042830 gaaatactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgac 34042731  T
Q  328 ccaaatatctcttataaatatgaccggag 356  Q
    | |||| ||||||||||||| ||||||||    
T  34042730 ctaaatttctcttataaataggaccggag 34042702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 23278035 - 23278125
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  ||||||||||||| |||| ||||||||||||| ||||||||    
T  23278035 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggag 23278125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 9981743 - 9981653
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  9981743 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 9981653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 14984933 - 14984843
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  14984933 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 14984843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 16448142 - 16448232
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| | || ||||||||| | ||||||  | | ||||||||| |||||||||||||| | ||||||||||||| ||||||||    
T  16448142 ggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggag 16448232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 27159392 - 27159482
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  27159392 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 27159482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 31842829 - 31842919
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  31842829 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 31842919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 39402000 - 39402090
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  39402000 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 39402090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 44668127 - 44668217
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  44668127 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 44668217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 356
Target Start/End: Original strand, 44955236 - 44955330
Alignment:
Q  262 tttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| | ||||||||||| ||||||||    
T  44955236 tttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggag 44955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 47216733 - 47216823
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  47216733 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 47216823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 11897130 - 11897178
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  11897130 atacatcaacttttgttgacccaaatttctcttataaataggaccggag 11897178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 26471101 - 26471189
Alignment:
Q  268 tcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  26471101 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 26471189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 356
Target Start/End: Complemental strand, 11897155 - 11897060
Alignment:
Q  261 atttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||| |||||||||||| |||| |||| |||||| ||||||    | ||||||||| ||||||||||| || | ||||||||||||| ||||||||    
T  11897155 atttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggag 11897060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 11796029 - 11795939
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | |||| |||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  11796029 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggag 11795939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 356
Target Start/End: Complemental strand, 12483684 - 12483634
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 12483634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 9981723 - 9981771
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  9981723 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 9981771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 11796009 - 11796057
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  11796009 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 11796057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 14984913 - 14984961
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  14984913 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 14984961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 17556829 - 17556877
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||| | ||||||||||||| ||||||||    
T  17556829 atacatcaacttttgttgacccaagtttctcttataaataggaccggag 17556877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 25694395 - 25694443
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  25694395 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 25694443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 27159412 - 27159364
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  27159412 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 27159364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 31842849 - 31842801
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  31842849 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 31842801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 39402020 - 39401972
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  39402020 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 39401972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 44668147 - 44668099
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  44668147 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 44668099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 47777535 - 47777487
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  47777535 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 47777487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 354
Target Start/End: Original strand, 47777515 - 47777603
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccgg 354  Q
    |||||||||||| |||| ||||| ||| | ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||    
T  47777515 ggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 47777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 44955260 - 44955209
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggagtat 359  Q
    ||||||||| ||||||||||| |||  ||||||||||||| |||||||||||    
T  44955260 atacatcaacttttgttgacctaaaattctcttataaataggaccggagtat 44955209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 1050984 - 1050894
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||| |||| |||| ||||| ||||| ||||||  | |||| |||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  1050984 ggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggag 1050894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 5392198 - 5392152
Alignment:
Q  311 catcaatttttgttgacccaaatatctcttataaatatgaccggagt 357  Q
    ||||||||||||||||| ||||| ||||||||||||| || ||||||    
T  5392198 catcaatttttgttgacacaaatgtctcttataaataggatcggagt 5392152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 11989855 - 11989905
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||| ||||||||    
T  11989855 aaatacatcaatttttattgactcaaatttcttttataaataggaccggag 11989905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 12213508 - 12213598
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||  |||||||| | ||||| ||||||  | |||||||| |||||||||||||| ||   ||||||||||||| ||| ||||    
T  12213508 ggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggag 12213598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 12483662 - 12483752
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||| | ||| | ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  12483662 ggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 12483752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 354
Target Start/End: Original strand, 37552225 - 37552263
Alignment:
Q  316 atttttgttgacccaaatatctcttataaatatgaccgg 354  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  37552225 atttttgttgacccaaatttctcttataaataggaccgg 37552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 352
Target Start/End: Original strand, 47588371 - 47588457
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    |||||||||||| |||| |||||  |||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||    
T  47588371 ggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagacc 47588457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 40676845 - 40676796
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatgaccgga 355  Q
    ||||||||| ||||||||||||| |||| | ||||||||||| |||||||    
T  40676845 aaatacatccatttttgttgaccaaaatgtttcttataaataagaccgga 40676796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 47969789 - 47969700
Alignment:
Q  268 tcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctc-ttataaatatgaccggag 356  Q
    |||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| |||| ||||||||| ||||||||    
T  47969789 tcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 1050964 - 1051012
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||| |||||||||||  ||||||||||||| ||||||||    
T  1050964 atacatcaactttagttgacccaaaattctcttataaataggaccggag 1051012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 26471119 - 26471071
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||| |||||  ||||||||||||| ||||||||    
T  26471119 atacatcaacttttgttgatccaaaattctcttataaataggaccggag 26471071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 34042772 - 34042820
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  |||||||||||||  |||||||    
T  34042772 atacatcaacttttgttgacccaaaattctcttataaatagaaccggag 34042820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 38791223 - 38791286
Alignment:
Q  292 taagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||| | ||||||||||| |||||||||||| | ||| |||||||||||||| || |||||    
T  38791223 taagaatttagacaaaatacattaatttttgttga-ctaaaaatctcttataaataggatcggag 38791286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 47216753 - 47216705
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  |||||||||||||  |||||||    
T  47216753 atacatcaacttttgttgacccaaaattctcttataaatagtaccggag 47216705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 347
Target Start/End: Complemental strand, 53275413 - 53275310
Alignment:
Q  244 ttctacttataataaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttata 343  Q
    ||||| |||||| ||| ||| ||||||||||||  |||| |||||  |||||||||   |  |||||||||||||||||||||||||||||||| |||||    
T  53275413 ttctatttataagaaatattaaggtcaacaaaatatgatgtatctaattaagaatttggattaaatacatcaatttttgttgacccaaatatcttttata 53275314  T
Q  344 aata 347  Q
    ||||    
T  53275313 aata 53275310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 42170380 - 42170470
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||||||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  42170380 ggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggag 42170470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 278 - 347
Target Start/End: Complemental strand, 25394421 - 25394352
Alignment:
Q  278 gtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    ||||||||||||||||||||||   || |||||||| |||||||||||| |||||||||||||| |||||    
T  25394421 gtgatttatctggttaagaatttgaaccaaatacattaatttttgttgatccaaatatctcttaaaaata 25394352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 11508387 - 11508458
Alignment:
Q  279 tgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatga 350  Q
    |||| |||||||||||||||| | |  |||||||| ||||||||||||| ||||||||| ||||||||||||    
T  11508387 tgatgtatctggttaagaatttagagtaaatacattaatttttgttgactcaaatatcttttataaatatga 11508458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 4238690 - 4238600
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  4238690 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 4238600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 10298075 - 10297985
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  10298075 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 10297985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 17653808 - 17653718
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  17653808 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 17653718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 19557086 - 19557176
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  19557086 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 19557176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 356
Target Start/End: Original strand, 21295356 - 21295450
Alignment:
Q  262 tttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||| |||| |||||  |||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  21295356 tttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 21295450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 22722027 - 22721937
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  22722027 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 22721937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 34080064 - 34080154
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  34080064 ggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 34080154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 37509017 - 37508927
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  37509017 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 37508927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 44785430 - 44785520
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  44785430 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 44785520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 356
Target Start/End: Complemental strand, 46208130 - 46208036
Alignment:
Q  262 tttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||| |||| |||||  |||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  46208130 tttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 46208036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 49823415 - 49823505
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  49823415 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 49823505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 51406749 - 51406797
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  51406749 atacatcaatttttgttgacccaaaattctcttataaataggaccggag 51406797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 8817420 - 8817507
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccg 353  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| |||||    
T  8817420 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 8817507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 357
Target Start/End: Original strand, 40691030 - 40691121
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggagt 357  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||| ||| |||| ||||||||||||| |||||||||    
T  40691030 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagt 40691121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 2787866 - 2787956
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||| |||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  2787866 ggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 2787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 38964488 - 38964398
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||| | |||| ||||||||||||| ||||||||    
T  38964488 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggag 38964398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 48340493 - 48340403
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| |||||| |||||| ||||||||    
T  48340493 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggag 48340403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 51406769 - 51406679
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||  |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  51406769 ggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggag 51406679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 8437520 - 8437431
Alignment:
Q  267 gtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | |||| |||||| |||| ||||||||||||| ||||||||    
T  8437520 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggag 8437431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 34080089 - 34080036
Alignment:
Q  303 acaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||| ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  34080089 acaagatacatcaacttttgttgacccaaaattctcttataaataggaccggag 34080036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 353
Target Start/End: Complemental strand, 35513567 - 35513482
Alignment:
Q  268 tcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccg 353  Q
    |||| |||||||||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| |||||    
T  35513567 tcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 35513482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 49687983 - 49687894
Alignment:
Q  250 ttataataaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctct 339  Q
    |||||| | ||||||| ||||||||||| |||||||||| ||| | |||| | | |||||||||||| ||||||| ||| || |||||||    
T  49687983 ttataaaagacatttatgtcaacaaaagttgatttatctagtttaaaatttagataaaatacatcaacttttgtttacctaagtatctct 49687894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 9111548 - 9111500
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  9111548 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 9111500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 9583018 - 9582974
Alignment:
Q  303 acaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||    
T  9583018 acaacatacatcaatttttgtcgactcaaatatctcttataaata 9582974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 10298055 - 10298103
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  10298055 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 10298103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 17653788 - 17653836
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  17653788 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 17653836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 19557106 - 19557058
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  19557106 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 19557058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 36095716 - 36095804
Alignment:
Q  268 tcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| | ||||||||||| ||||||||    
T  36095716 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggag 36095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 37508997 - 37509045
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  37508997 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 37509045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 40691050 - 40691002
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  40691050 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 40691002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 42507409 - 42507361
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  42507409 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 42507361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 48340473 - 48340521
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  48340473 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 48340521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 49823435 - 49823387
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  49823435 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 49823387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 8817440 - 8817393
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccgga 355  Q
    ||||||||| |||||||||||||||  ||||||||||||| |||||||    
T  8817440 atacatcaacttttgttgacccaaaattctcttataaataggaccgga 8817393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 9111528 - 9111615
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccg 353  Q
    |||||||||||| |||| ||||| ||||| ||||||    ||||||||  | ||||||||||| |||| ||||||||||||| |||||    
T  9111528 ggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccg 9111615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 22722007 - 22722054
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccgga 355  Q
    ||||||||| |||||||||||||||  ||||||||||||| |||||||    
T  22722007 atacatcaacttttgttgacccaaaattctcttataaataggaccgga 22722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 9213590 - 9213640
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||||||||||||||||| |||| ||||| ||||||| ||| ||||    
T  9213590 aaatacatcaatttttgttgacctaaatttctctaataaataggacgggag 9213640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 42507389 - 42507479
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||| | ||||||  | ||||||||  | ||||||||||| |||| ||| ||||||||| ||||||||    
T  42507389 ggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggag 42507479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 33942966 - 33943047
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    |||||||||||| |||| ||||| ||||| ||||||  | |||||||| || ||||||||||| || | ||| |||||||||    
T  33942966 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaata 33943047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 2131748 - 2131796
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||| ||||| |||| || ||||||||    
T  2131748 atacatcaacttttgttgacccaaatgtctctcataagtaggaccggag 2131796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 2787886 - 2787838
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||| |||||||||  ||||||||||||| ||||||||    
T  2787886 atacatcaacttttgctgacccaaaattctcttataaataggaccggag 2787838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 4238670 - 4238718
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  4238670 atacatcaacttttgttgaccaaaaattctcttataaataggaccggag 4238718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 6013370 - 6013450
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaat 346  Q
    ||||||||||||   |||||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||    
T  6013370 ggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 6013450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 8437501 - 8437549
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||| ||||  ||||||||||||| ||||||||    
T  8437501 atacatcaacttttgttgactcaaaattctcttataaataggaccggag 8437549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 9027196 - 9027148
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||| | | ||||||||||| ||||||||    
T  9027196 atacatcaacttttgttgacccaactttatcttataaataggaccggag 9027148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 21295380 - 21295332
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  21295380 atacatcaacttttgttgacctaaaattctcttataaataggaccggag 21295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 34988151 - 34988199
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| | |||||||| ||||||| ||||||||||| ||||||||    
T  34988151 atacatcaactattgttgactcaaatatttcttataaataggaccggag 34988199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 38964468 - 38964516
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  38964468 atacatcaacttttgttgaccaaaaattctcttataaataggaccggag 38964516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 42170400 - 42170356
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||    
T  42170400 atacatcaacttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 44785450 - 44785402
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  |||||||||||||  |||||||    
T  44785450 atacatcaacttttgttgacccaaaattctcttataaatagaaccggag 44785402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 45652123 - 45652075
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||| |||||||||||| ||||| ||||||||||||| ||| ||||    
T  45652123 atacatccatttttgttgactcaaatgtctcttataaataggactggag 45652075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 46208106 - 46208154
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  46208106 atacatcaacttttgttgacctaaaattctcttataaataggaccggag 46208154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 347
Target Start/End: Complemental strand, 31013125 - 31013036
Alignment:
Q  258 aacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    |||||||||||||||||||| |||| ||||| |||||||||| | || ||||||||| | ||||||||| | |||| ||| |||||||||    
T  31013125 aacatttaggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 356
Target Start/End: Original strand, 24393838 - 24393944
Alignment:
Q  250 ttataataaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttt-tgttgacccaaatatctcttataaatat 348  Q
    |||||| ||| |||||||| ||||||| ||||  ||||| ||||||| || | || ||||||||||||||| ||||||||||||| | |||||| |||||    
T  24393838 ttataagaaatatttaggtaaacaaaaagtgacgtatctcgttaagatttga-accaaatacatcaattttttgttgacccaaatgtttcttatgaatat 24393936  T
Q  349 gaccggag 356  Q
    ||||||||    
T  24393937 gaccggag 24393944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 3372217 - 3372127
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  3372217 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 3372127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 306 - 356
Target Start/End: Complemental strand, 3904739 - 3904689
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  3904739 aaatacatcaatttttgttgacccaaaattctcttataaataggaccggag 3904689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 3993072 - 3992982
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  3993072 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggag 3992982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 356
Target Start/End: Complemental strand, 42797832 - 42797738
Alignment:
Q  262 tttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||| ||| ||||||||    
T  42797832 tttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggag 42797738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 47833707 - 47833617
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  47833707 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 47833617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 48336359 - 48336269
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  48336359 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 48336269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 347
Target Start/End: Original strand, 50430447 - 50430533
Alignment:
Q  261 atttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    |||| |||||||||||  |||| ||||||||||| ||||||  | ||||||||||| |||||||||||||| |  ||||||||||||    
T  50430447 atttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 356
Target Start/End: Complemental strand, 33551292 - 33551207
Alignment:
Q  271 acaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||| |||| ||||| ||||| ||||||  ||||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  33551292 acaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 33551207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 38160426 - 38160378
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  38160426 atacatcaatttttgttgacctaaatctctcttataaatatgactggag 38160378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 347
Target Start/End: Original strand, 6422503 - 6422582
Alignment:
Q  268 tcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    |||| ||||| ||||||||||| || | | || | || ||||| ||||||||||||||||| ||||||||||||||||||    
T  6422503 tcaataaaagttgatttatctgattcaaattttaaactaaatatatcaatttttgttgacctaaatatctcttataaata 6422582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 305 - 356
Target Start/End: Original strand, 17236861 - 17236912
Alignment:
Q  305 aaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||||||||||||||| | ||||||||||| ||||||||    
T  17236861 aaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 50430472 - 50430433
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaata 347  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  50430472 atacatcaatttttgttgacccaaatatatcttataaata 50430433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 5986950 - 5987000
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 5987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 6121927 - 6122017
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||| | |||| ||||||||||||| ||||||||    
T  6121927 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggag 6122017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 7579406 - 7579316
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||| ||| |||| ||||||||||||| ||||||||    
T  7579406 ggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggag 7579316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 20538720 - 20538810
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||  |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  20538720 ggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 20538810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 24704466 - 24704376
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| | || ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  24704466 ggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 24704376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 356
Target Start/End: Complemental strand, 43900641 - 43900555
Alignment:
Q  270 aacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  43900641 aacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggag 43900555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 46797821 - 46797731
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| |||||||||||||  |||||||    
T  46797821 ggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggag 46797731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 47838651 - 47838741
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| || |||||    
T  47838651 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggag 47838741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 51894616 - 51894706
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||||||||| ||||||  | ||| ||||  | ||||||||||| |||| | ||||||||||| ||||||||    
T  51894616 ggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggag 51894706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 52756771 - 52756681
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | || |||||||| |||| ||||||||||||| ||||||||    
T  52756771 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggag 52756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 53337466 - 53337376
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||| ||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  53337466 ggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 53337376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 33621892 - 33621811
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| |||||||||||||    
T  33621892 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 33621811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 1716355 - 1716307
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||||| || ||||||||||||||| ||||||||    
T  1716355 atacatcaacttttgttgaccaaattatctcttataaataagaccggag 1716307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 3422136 - 3422184
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  3422136 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 3422184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 3993052 - 3993100
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  3993052 atacatcaacttttgttgacccaaaattctcttataaataagaccggag 3993100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 6121947 - 6121899
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  6121947 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 6121899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 20538740 - 20538692
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  20538740 atacatcaaattttgttgacccaaaattctcttataaataggaccggag 20538692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 47833687 - 47833735
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  47833687 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 47833735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 51894636 - 51894588
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  51894636 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 51894588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 23226057 - 23226018
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaata 347  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  23226057 atacatcaatttttgttgatctaaatatctcttataaata 23226018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 3079660 - 3079606
Alignment:
Q  303 acaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggagt 357  Q
    ||||||||||||||||||| ||||   |||||||| ||||||||| |||||||||    
T  3079660 acaaaatacatcaatttttattgataaaaatatcttttataaataagaccggagt 3079606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 21892217 - 21892263
Alignment:
Q  310 acatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||||||    
T  21892217 acatcaatttttgttgacaaaaatatctctcataaataagaccggag 21892263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 356
Target Start/End: Complemental strand, 26231668 - 26231583
Alignment:
Q  271 acaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||| |||| ||||| ||||| ||||||  | ||||||||    ||||||||||| |||| ||||||||||||| ||||||||    
T  26231668 acaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggag 26231583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 41615732 - 41615683
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatgaccgga 355  Q
    ||||||||||| ||||||||| |||| | ||||||||||||| |||||||    
T  41615732 aaatacatcaacttttgttgatccaattttctcttataaataggaccgga 41615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 3372197 - 3372245
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  | ||||||||||| ||||||||    
T  3372197 atacatcaacttttgttgacccaaaattatcttataaataggaccggag 3372245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 4780371 - 4780419
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||| || ||||||||||| |||| ||||||||||||| ||||||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggag 4780419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 7579386 - 7579434
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  |||||||||||||  |||||||    
T  7579386 atacatcaacttttgttgacccaaaattctcttataaatagaaccggag 7579434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 33621872 - 33621920
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  | ||||||||||| ||||||||    
T  33621872 atacatcaacttttgttgacccaaaattatcttataaataggaccggag 33621920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 40913239 - 40913195
Alignment:
Q  312 atcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||||||    
T  40913239 atcaacttttgttgatccaaatttctcttataaataggaccggag 40913195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 40913225 - 40913313
Alignment:
Q  268 tcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||| |||| ||||  ||||| ||||||  | ||||||||  | ||||||||| | |||| ||||||||||||| ||||||||    
T  40913225 tcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggag 40913313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 41469820 - 41469772
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  41469820 atacatcaacttttgttgaccaaaaattctcttataaataggaccggag 41469772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 42797808 - 42797856
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  42797808 atacatcaacttttgttgacctaaaattctcttataaataggaccggag 42797856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 43900625 - 43900673
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||| |||||||  ||||||||||||| ||||||||    
T  43900625 atacatcaacttttgttaacccaaaattctcttataaataggaccggag 43900673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 44900130 - 44900086
Alignment:
Q  312 atcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||| |||||||||||  ||||||||||||||||| ||||||||    
T  44900130 atcaacttttgttgaccagaatatctcttataaataggaccggag 44900086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 46797805 - 46797849
Alignment:
Q  312 atcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||| |||||||||||||||  ||||||||||||| ||||||||    
T  46797805 atcaacttttgttgacccaaaattctcttataaataggaccggag 46797849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 47838671 - 47838623
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  47838671 atacatcaacttttgttgaccaaaaattctcttataaataggaccggag 47838623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 48336339 - 48336387
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  | ||||||||||| ||||||||    
T  48336339 atacatcaacttttgttgacccaaaattttcttataaataggaccggag 48336387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 53337446 - 53337494
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||| ||||||||||  ||||||||||||| ||||||||    
T  53337446 atacatcaacttttattgacccaaaattctcttataaataggaccggag 53337494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 23881 - 23791
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  23881 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 23791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 23861 - 23909
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  | ||||||||||| ||||||||    
T  23861 atacatcaacttttgttgacccaaaattttcttataaataggaccggag 23909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 54646 - 54736
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  54646 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 54736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 2890196 - 2890286
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  2890196 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 2890286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 3304312 - 3304402
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  3304312 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 3304402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 6552751 - 6552661
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  6552751 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 6552661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 7785812 - 7785902
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  7785812 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 7785902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 12343174 - 12343264
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  12343174 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 12343264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 12763688 - 12763778
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  12763688 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggag 12763778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 15888386 - 15888476
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  15888386 ggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 15888476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 356
Target Start/End: Complemental strand, 28463699 - 28463617
Alignment:
Q  274 aaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||| |||| ||||||||| | ||||||  | ||||||||||| |||||||||||||| | ||||||||||||| ||||||||    
T  28463699 aaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggag 28463617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 31654709 - 31654619
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  31654709 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 31654619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 32211397 - 32211487
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||  |||| ||||| ||||| ||||||  | ||||||||  ||||||||||||| |||| ||||||||||||| ||||||||    
T  32211397 ggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggag 32211487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 43199388 - 43199478
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  43199388 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 43199478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 8587265 - 8587176
Alignment:
Q  267 gtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||| ||||| |||| ||||| ||||| |||| |  ||||||||||||| ||||||||||| || | ||||||||||||| ||||||||    
T  8587265 gtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggag 8587176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 32211417 - 32211369
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  32211417 atacatcaatttttgttgacccaaaattctcttataaataggaccggag 32211369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 356
Target Start/End: Original strand, 32114472 - 32114599
Alignment:
Q  229 aaatgctccctctgcttctacttataataaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacc 328  Q
    |||| ||||||| | | ||| |||||| |||  ||| |||||||||||  |||| ||||| ||||| ||||||  | ||||||||  | |||||||||||    
T  32114472 aaatactccctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 32114571  T
Q  329 caaatatctcttataaatatgaccggag 356  Q
     |||| ||||||||||||| ||||||||    
T  32114572 taaatttctcttataaataggaccggag 32114599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 7805733 - 7805823
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||| |||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  7805733 ggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 7805823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 39571237 - 39571327
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||| | |||| ||||||||||||| ||||||||    
T  39571237 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggag 39571327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 44498221 - 44498311
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||| ||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  44498221 ggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 44498311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 54666 - 54618
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  54666 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 54618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 2890216 - 2890168
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  2890216 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 2890168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 6552731 - 6552779
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  6552731 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 6552779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 7785832 - 7785784
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  7785832 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 7785784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 32114529 - 32114481
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||||||||||||  | ||||||||||| ||||||||    
T  32114529 atacatcaatttttgttgacccaaaattttcttataaataggaccggag 32114481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 33289315 - 33289267
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  33289315 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 33289267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 39571257 - 39571209
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  39571257 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 39571209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 12343194 - 12343143
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggagtat 359  Q
    ||||||||| ||||||||||| |||  ||||||||||||| |||||||||||    
T  12343194 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagtat 12343143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 351
Target Start/End: Original strand, 13578933 - 13578976
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgac 351  Q
    ||||||||| |||||||||||||||  |||||||||||||||||    
T  13578933 atacatcaacttttgttgacccaaaattctcttataaatatgac 13578976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 33057670 - 33057717
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccgga 355  Q
    ||||||||||||||||||||| || | ||||||||||||| |||||||    
T  33057670 atacatcaatttttgttgaccaaactttctcttataaataagaccgga 33057717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 25601034 - 25601124
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| | || ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| || |||||    
T  25601034 ggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggag 25601124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 33289295 - 33289385
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | || |||||| | |||| ||||||||||||| ||||||||    
T  33289295 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggag 33289385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 17007006 - 17006917
Alignment:
Q  267 gtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||| ||||| |||| |||||| |||| ||||||  | | || |||||| |||||||||||||| | ||||||||||||| || |||||    
T  17007006 gtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggag 17006917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 356
Target Start/End: Original strand, 17570241 - 17570330
Alignment:
Q  267 gtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||| ||||| |||| |||||| |||| ||||||  | | || |||||| |||||||||||||| | ||||||||||||| || |||||    
T  17570241 gtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggag 17570330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 27422274 - 27422311
Alignment:
Q  316 atttttgttgacccaaatatctcttataaatatgaccg 353  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  27422274 atttttgttgacccaaatttctcttataaataggaccg 27422311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 3304332 - 3304284
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  | ||||||||||| ||||||||    
T  3304332 atacatcaacttttgttgacccaaaattttcttataaataggaccggag 3304284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 7012265 - 7012177
Alignment:
Q  268 tcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||| |||| ||||| ||||| ||||||  | ||||| ||  | ||||||||| | |||| ||||||||||||| ||||||||    
T  7012265 tcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggag 7012177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 7012247 - 7012295
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||| |||||  ||||||||||||| ||||||||    
T  7012247 atacatcaacttttgttgatccaaaattctcttataaataggaccggag 7012295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 7805753 - 7805705
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||| |||||||||  ||||||||||||| ||||||||    
T  7805753 atacatcaacttttgctgacccaaaattctcttataaataggaccggag 7805705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 12763708 - 12763660
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  | ||||||||||| ||||||||    
T  12763708 atacatcaacttttgttgacccaaaattatcttataaataggaccggag 12763660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 25601054 - 25601006
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||| || |||||||||||||||  ||||||||||||| ||||||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggag 25601006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 31654689 - 31654737
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||| ||||||||| ||||||||    
T  31654689 atacatcaacttttgttgacccaaaattcttttataaataggaccggag 31654737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 43199408 - 43199360
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||||| |||  ||||||||||||| ||||||||    
T  43199408 atacatcaacttttgttgaccaaaaattctcttataaataggaccggag 43199360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 44498241 - 44498193
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||| ||||||||||  ||||||||||||| ||||||||    
T  44498241 atacatcaacttttattgacccaaaattctcttataaataggaccggag 44498193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 1565763 - 1565853
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  1565763 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 1565853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 1738481 - 1738571
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  1738481 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 1738571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 7240845 - 7240755
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  7240845 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 7240755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 23314173 - 23314263
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  23314173 ggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 23314263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 31319433 - 31319523
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  31319433 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 31319523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 38063947 - 38064037
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  38063947 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 38064037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 46840956 - 46840866
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  46840956 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 46840866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 28536787 - 28536875
Alignment:
Q  268 tcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||| ||||| |||| ||||| ||||| ||||||| | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  28536787 tcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 28536875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 94352 - 94442
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| |||||   | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  94352 ggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 94442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 356
Target Start/End: Original strand, 7269443 - 7269529
Alignment:
Q  270 aacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||| ||||  |||||||||| ||||||    | |||||||||||||||||||||||| | | ||||||||||| ||||||||    
T  7269443 aacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggag 7269529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 7482321 - 7482231
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||    ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  7482321 ggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 7482231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 352
Target Start/End: Complemental strand, 9268852 - 9268766
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||    
T  9268852 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 9268766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 22285795 - 22285705
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| |||||  |||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  22285795 ggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 22285705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 36016230 - 36016320
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| |||||  |||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  36016230 ggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 36016320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 36583491 - 36583401
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| |||| |  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  36583491 ggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 36583401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 958506 - 958547
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  958506 aaatatatcaatttttgttgacctaaatatctcttataaata 958547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 1738501 - 1738453
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  1738501 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 1738453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 7240825 - 7240873
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  7240825 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 7240873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 7482301 - 7482349
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  7482301 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 7482349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 9268832 - 9268880
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  9268832 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 9268880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 22285775 - 22285823
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  22285775 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 22285823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 33418452 - 33418500
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  33418452 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 38441536 - 38441584
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  38441536 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 38441584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 46840936 - 46840984
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  46840936 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 46840984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 4790344 - 4790254
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||| ||||| |||| ||||| ||||| |||| |  | ||||||||  ||||||||||||| |||| | ||||||||||| ||||||||    
T  4790344 ggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggag 4790254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 38441556 - 38441466
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||    ||||||||  | ||||||||||  |||| ||||||||||||| ||||||||    
T  38441556 ggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggag 38441466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 94372 - 94324
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| || |||||    
T  94372 atacatcaacttttgttgacccaaaattctcttataaataggatcggag 94324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 4790324 - 4790372
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||| ||||||||||  ||||||||||||| ||||||||    
T  4790324 atacatcaacttttattgacccaaaattctcttataaataggaccggag 4790372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 7661152 - 7661196
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    ||||||||| |||||||||||||||| |||| |||||||| ||||    
T  7661152 atacatcaacttttgttgacccaaatgtctcatataaataggacc 7661196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 23314189 - 23314145
Alignment:
Q  312 atcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||| |||||||||||||||  ||||||||||||| ||||||||    
T  23314189 atcaacttttgttgacccaaaattctcttataaataggaccggag 23314145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 31319453 - 31319405
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  |||||||||||||  |||||||    
T  31319453 atacatcaacttttgttgacccaaaattctcttataaatagaaccggag 31319405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 36016250 - 36016206
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||    
T  36016250 atacatcaacttttgttgacccaaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 36583471 - 36583519
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| || |||||    
T  36583471 atacatcaacttttgttgacccaaaattctcttataaataggatcggag 36583519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 38063967 - 38063923
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||    
T  38063967 atacatcaacttttgttgacccaaaattctcttataaataggacc 38063923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 9395446 - 9395356
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  9395446 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 9395356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 37148989 - 37149079
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  37148989 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 37149079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 583085 - 582995
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | || |||||||| |||| ||||||||||||| ||||||||    
T  583085 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggag 582995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 11795264 - 11795174
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| || |||||    
T  11795264 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggag 11795174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 13033147 - 13033057
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| |||||  |||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  13033147 ggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 13033057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 13103120 - 13103030
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| |||||  |||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  13103120 ggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 13103030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 352
Target Start/End: Complemental strand, 23360038 - 23359952
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgacc 352  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||    
T  23360038 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 23359952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 36563572 - 36563662
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| || |||||    
T  36563572 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggag 36563662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 41989441 - 41989531
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||| ||||| ||||||||    
T  41989441 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggag 41989531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 6126900 - 6126948
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  6126900 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 6126948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 9395426 - 9395474
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  9395426 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 9395474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 13103100 - 13103148
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  13103100 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 13103148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 17025700 - 17025748
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  17025700 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 17025748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 23360018 - 23360066
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  23360018 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 23360066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 36563592 - 36563544
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  36563592 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 36563544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 41989461 - 41989413
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  41989461 atacatcaacttttgttgacccaaaattctcttataaataggaccggag 41989413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 353
Target Start/End: Complemental strand, 4444060 - 4443969
Alignment:
Q  262 tttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccg 353  Q
    ||||| |||||||||| |||| |||||  |||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| |||||    
T  4444060 tttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccg 4443969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 356
Target Start/End: Original strand, 11574161 - 11574204
Alignment:
Q  313 tcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||    
T  11574161 tcaatttttgttgacctaaatgtctcttataaataggaccggag 11574204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 17025720 - 17025630
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||    ||||||||  | |||||| |||| |||| ||||||||||||| ||||||||    
T  17025720 ggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggag 17025630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 36595828 - 36595782
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccgg 354  Q
    ||||||||||||||||||||| || | ||||||||||||| ||||||    
T  36595828 atacatcaatttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 3549585 - 3549662
Alignment:
Q  270 aacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaata 347  Q
    |||||||| |||| |||  |||||| |||| | || | |||||| |||||||||||||  ||||||||||||||||||    
T  3549585 aacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatctcttataaata 3549662  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 11795244 - 11795292
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||| ||||    
T  11795244 atacatcaacttttgttgacccaaaattctcttataaataggactggag 11795292  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 13033127 - 13033175
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||||||||||||| || |||||    
T  13033127 atacatcaacttttgttgacccaaaattctcttataaataggatcggag 13033175  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 20848150 - 20848197
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  20848150 atacatcaatttttgttg-cccaaaattctcttataaataggaccggag 20848197  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 21576022 - 21576070
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||||||| |||||  ||||||||||||| ||||||||    
T  21576022 atacatcaacttttgttgatccaaaattctcttataaataggaccggag 21576070  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 26350386 - 26350474
Alignment:
Q  268 tcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||| ||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| || |||||    
T  26350386 tcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggag 26350474  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 35585362 - 35585322
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaat 346  Q
    |||||||||||||||||||||  ||||||||| ||||||||    
T  35585362 aaatacatcaatttttgttgattcaaatatcttttataaat 35585322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 37149009 - 37148961
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  ||| ||||||||| ||||||||    
T  37149009 atacatcaacttttgttgacccaaaattctattataaataggaccggag 37148961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 37642030 - 37642078
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||| ||||||||||  ||||||||||||| ||||||||    
T  37642030 atacatcaacttttattgacccaaaattctcttataaataggaccggag 37642078  T

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Target: scaffold1707 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 355
Target Start/End: Complemental strand, 1431 - 1342
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccgga 355  Q
    |||||||||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| |||||||    
T  1431 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 1342  T

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Target: scaffold0482 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 12956 - 12866
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||| |||||| |||| ||||| ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  12956 ggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 12866  T

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Target: scaffold0482; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 12936 - 12984
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| ||||| |||||||||  ||||||||||||| ||||||||    
T  12936 atacatcaacttttgctgacccaaaattctcttataaataggaccggag 12984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Original strand, 6165 - 6255
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||||| ||||| ||||||  | | ||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  6165 ggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggag 6255  T

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Target: scaffold0464; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 6185 - 6137
Alignment:
Q  308 atacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||| |||||||||||||||  | ||||||||||| ||||||||    
T  6185 atacatcaacttttgttgacccaaaattttcttataaataggaccggag 6137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 356
Target Start/End: Complemental strand, 49601 - 49511
Alignment:
Q  266 ggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    |||||||||||| |||| ||| | ||||| ||||||  | ||||||||  | ||||||||||| |||| ||||||||||||| ||||||||    
T  49601 ggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 49511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 49579 - 49629
Alignment:
Q  306 aaatacatcaatttttgttgacccaaatatctcttataaatatgaccggag 356  Q
    ||||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 49629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 30032 - 30130
Alignment:
Q  257 aaacatttaggtcaacaaaaggtgatttatctggttaagaattcatacaaaatacatcaatttttgttgacccaaatatctcttataaatatgaccgga 355  Q
    ||||||||| ||||| ||||| |||| ||||| |||||||||| | || ||||||||| | ||||||| |   |||| ||| |||||||||||| ||||    
T  30032 aaacatttatgtcaataaaagatgatgtatctagttaagaatttagaccaaatacatctacttttgtttatttaaatgtctattataaatatgatcgga 30130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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