View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3907_high_3 (Length: 345)
Name: NF3907_high_3
Description: NF3907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3907_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 18 - 333
Target Start/End: Original strand, 38699430 - 38699745
Alignment:
| Q |
18 |
gcttgttggtgtgtttcattttaaaattgtggccggagaagccacttttgcttctgcggcttaaaatggtaattaatcatcataatgaactcaattatat |
117 |
Q |
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| T |
38699430 |
gcttgttggtgtgtttcattttaaaattgtgaccggagaagccacttttgcttctgcggcttaaaatggtaattaatcatcataatgaactcaattatat |
38699529 |
T |
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| Q |
118 |
gttattttcattctattgattattttgttttcatccactgtttcagtgtttgttgaatcacatgaagctaattattcttgatctgaactcaactttcaag |
217 |
Q |
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| T |
38699530 |
gctattttcattctattgattattttgttttcatccactgtttcaatgtttgttgaatcacatgaagctaattattcttgatctgaactcaactttcaag |
38699629 |
T |
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| Q |
218 |
gtattttcatcgtcctgctgaattannnnnnnccgattggtttcggcgtttgttacatcacaaatattgctctacagataatcttagtttgccagtttga |
317 |
Q |
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| T |
38699630 |
gtattttcatcgtcctgctgaattatttttttccgattggtttcggcttttgttgcatcacaaatattgctctacagataatcttagtttgccagtttga |
38699729 |
T |
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| Q |
318 |
ctatatatgatccctt |
333 |
Q |
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| T |
38699730 |
ctatatatgatccctt |
38699745 |
T |
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