View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3909_low_11 (Length: 355)
Name: NF3909_low_11
Description: NF3909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3909_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 217 - 341
Target Start/End: Original strand, 22215120 - 22215244
Alignment:
| Q |
217 |
taccatatggtaatccattagaagatgtaatggtcgatgttatcaaagggtgtcgtacagtttttaaagaaaaacctccacaaaagaaggaagatccagg |
316 |
Q |
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| T |
22215120 |
taccatatggtaatccattagaagatgtaatggtcgatgttatcaaagggtgtcgtacagtttttaaagaaaaacctccacaaaagaaggaagatccagg |
22215219 |
T |
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| Q |
317 |
atggtttaacatacctgttacgatc |
341 |
Q |
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||||||||||||||||||||||||| |
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| T |
22215220 |
atggtttaacatacctgttacgatc |
22215244 |
T |
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