View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3909_low_21 (Length: 238)

Name: NF3909_low_21
Description: NF3909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3909_low_21
NF3909_low_21
[»] chr4 (19 HSPs)
chr4 (10-222)||(3270543-3270755)
chr4 (17-222)||(3268331-3268536)
chr4 (18-222)||(12885277-12885481)
chr4 (19-222)||(10985713-10985915)
chr4 (17-219)||(12217561-12217757)
chr4 (18-222)||(21332543-21332746)
chr4 (20-214)||(49402697-49402893)
chr4 (18-219)||(25239695-25239895)
chr4 (15-219)||(45313147-45313349)
chr4 (57-219)||(9901739-9901901)
chr4 (18-187)||(17282489-17282658)
chr4 (19-142)||(16396266-16396389)
chr4 (25-192)||(13861340-13861507)
chr4 (28-198)||(26780824-26780994)
chr4 (56-214)||(8082050-8082207)
chr4 (113-209)||(28891919-28892014)
chr4 (76-197)||(34845514-34845635)
chr4 (101-193)||(15455466-15455558)
chr4 (154-219)||(18284661-18284724)
[»] chr7 (16 HSPs)
chr7 (21-214)||(30770189-30770381)
chr7 (17-210)||(20093545-20093738)
chr7 (19-222)||(21802447-21802650)
chr7 (19-222)||(9548968-9549171)
chr7 (19-219)||(29164849-29165049)
chr7 (19-209)||(7595360-7595549)
chr7 (20-207)||(2249992-2250179)
chr7 (19-192)||(47295681-47295854)
chr7 (106-221)||(22703894-22704009)
chr7 (18-222)||(22705602-22705800)
chr7 (18-187)||(21592876-21593045)
chr7 (18-192)||(18153155-18153329)
chr7 (25-169)||(38612607-38612751)
chr7 (18-181)||(18185662-18185825)
chr7 (70-213)||(28794078-28794220)
chr7 (21-153)||(30764982-30765114)
[»] scaffold0034 (1 HSPs)
scaffold0034 (18-222)||(47414-47618)
[»] chr5 (17 HSPs)
chr5 (18-222)||(5931187-5931391)
chr5 (19-219)||(28068023-28068223)
chr5 (26-219)||(22922645-22922838)
chr5 (19-213)||(42792487-42792681)
chr5 (19-207)||(15620191-15620379)
chr5 (19-219)||(41037645-41037854)
chr5 (56-219)||(38608267-38608430)
chr5 (64-219)||(22922086-22922241)
chr5 (18-222)||(8244508-8244717)
chr5 (18-192)||(23495375-23495549)
chr5 (18-192)||(36712648-36712822)
chr5 (18-185)||(20899595-20899762)
chr5 (18-192)||(5590696-5590870)
chr5 (20-147)||(19329925-19330052)
chr5 (18-179)||(33622489-33622653)
chr5 (18-98)||(22510102-22510182)
chr5 (178-219)||(19330051-19330092)
[»] chr2 (12 HSPs)
chr2 (18-222)||(3770257-3770461)
chr2 (21-222)||(41266197-41266399)
chr2 (21-222)||(23755820-23756021)
chr2 (19-222)||(25133933-25134136)
chr2 (26-219)||(42534129-42534322)
chr2 (19-219)||(23929797-23929997)
chr2 (20-212)||(19092728-19092920)
chr2 (26-219)||(29568315-29568507)
chr2 (19-219)||(3105204-3105404)
chr2 (56-168)||(26155019-26155131)
chr2 (18-192)||(27347196-27347370)
chr2 (140-222)||(26159154-26159236)
[»] scaffold0002 (2 HSPs)
scaffold0002 (19-219)||(391459-391659)
scaffold0002 (19-214)||(380767-380961)
[»] chr8 (18 HSPs)
chr8 (18-222)||(2085741-2085945)
chr8 (18-222)||(18040480-18040683)
chr8 (17-219)||(7999650-7999850)
chr8 (9-219)||(18574007-18574220)
chr8 (19-219)||(24033762-24033965)
chr8 (18-219)||(32009012-32009213)
chr8 (19-219)||(7454666-7454866)
chr8 (31-213)||(10532801-10532983)
chr8 (25-214)||(11709373-11709562)
chr8 (56-193)||(41280846-41280983)
chr8 (20-214)||(24060563-24060757)
chr8 (27-192)||(25820743-25820908)
chr8 (117-214)||(33273604-33273701)
chr8 (19-156)||(22609492-22609631)
chr8 (172-222)||(17775705-17775755)
chr8 (137-192)||(1788677-1788732)
chr8 (20-95)||(33273523-33273598)
chr8 (76-140)||(22282161-22282225)
[»] chr6 (27 HSPs)
chr6 (19-219)||(23574394-23574594)
chr6 (20-219)||(19860052-19860251)
chr6 (19-212)||(18736007-18736200)
chr6 (18-222)||(4409193-4409397)
chr6 (18-220)||(7968493-7968695)
chr6 (20-219)||(14910605-14910805)
chr6 (18-222)||(8306061-8306261)
chr6 (20-219)||(12738495-12738694)
chr6 (18-222)||(15119719-15119921)
chr6 (26-214)||(18014464-18014652)
chr6 (19-219)||(29482591-29482791)
chr6 (19-214)||(18728926-18729121)
chr6 (18-192)||(29095016-29095190)
chr6 (18-219)||(24438560-24438760)
chr6 (19-219)||(18258594-18258794)
chr6 (56-155)||(23524128-23524227)
chr6 (56-187)||(15349665-15349796)
chr6 (104-222)||(18043337-18043455)
chr6 (56-214)||(15319015-15319172)
chr6 (56-187)||(15369661-15369792)
chr6 (25-161)||(3876376-3876512)
chr6 (24-142)||(17757022-17757140)
chr6 (78-213)||(14480001-14480135)
chr6 (18-97)||(21508637-21508716)
chr6 (78-161)||(7099285-7099368)
chr6 (78-161)||(8795262-8795345)
chr6 (80-187)||(6109473-6109583)
[»] scaffold0989 (1 HSPs)
scaffold0989 (18-222)||(1520-1724)
[»] chr1 (10 HSPs)
chr1 (18-222)||(19442109-19442313)
chr1 (18-222)||(19967417-19967621)
chr1 (19-213)||(9858973-9859171)
chr1 (25-210)||(38621812-38621997)
chr1 (63-219)||(8990805-8990961)
chr1 (56-212)||(8995475-8995630)
chr1 (56-192)||(21817775-21817911)
chr1 (57-219)||(24973924-24974085)
chr1 (78-192)||(22186045-22186159)
chr1 (115-192)||(21815619-21815696)
[»] scaffold0058 (2 HSPs)
scaffold0058 (18-214)||(1613-1810)
scaffold0058 (67-219)||(15365-15517)
[»] scaffold0280 (1 HSPs)
scaffold0280 (19-214)||(1040-1235)
[»] scaffold0042 (2 HSPs)
scaffold0042 (10-219)||(74845-75054)
scaffold0042 (10-203)||(68689-68882)
[»] scaffold0150 (1 HSPs)
scaffold0150 (18-214)||(30056-30252)
[»] scaffold0170 (1 HSPs)
scaffold0170 (19-219)||(16315-16516)
[»] chr3 (11 HSPs)
chr3 (19-219)||(22915052-22915252)
chr3 (25-212)||(16853014-16853201)
chr3 (18-148)||(19790346-19790476)
chr3 (79-219)||(16914706-16914846)
chr3 (138-222)||(1998003-1998087)
chr3 (144-219)||(19773386-19773462)
chr3 (19-213)||(3559119-3559311)
chr3 (121-214)||(22006498-22006590)
chr3 (121-214)||(22014015-22014107)
chr3 (19-143)||(44635823-44635947)
chr3 (117-161)||(36639652-36639696)
[»] scaffold0008 (2 HSPs)
scaffold0008 (20-219)||(242673-242872)
scaffold0008 (20-219)||(253313-253512)
[»] scaffold0083 (1 HSPs)
scaffold0083 (25-219)||(4202-4396)
[»] scaffold0026 (1 HSPs)
scaffold0026 (27-219)||(151299-151490)
[»] scaffold0013 (1 HSPs)
scaffold0013 (27-219)||(37234-37425)
[»] scaffold0299 (1 HSPs)
scaffold0299 (101-222)||(19147-19268)
[»] scaffold0192 (1 HSPs)
scaffold0192 (56-219)||(12323-12486)
[»] scaffold0111 (1 HSPs)
scaffold0111 (20-219)||(2831-3029)
[»] scaffold0084 (1 HSPs)
scaffold0084 (19-186)||(54603-54770)
[»] scaffold0362 (1 HSPs)
scaffold0362 (18-192)||(7349-7522)
[»] scaffold0265 (2 HSPs)
scaffold0265 (56-192)||(14898-15034)
scaffold0265 (115-192)||(17113-17190)
[»] scaffold0096 (1 HSPs)
scaffold0096 (53-184)||(10906-11037)
[»] scaffold0025 (1 HSPs)
scaffold0025 (81-219)||(86424-86562)
[»] scaffold0011 (1 HSPs)
scaffold0011 (77-187)||(20342-20452)
[»] scaffold0063 (2 HSPs)
scaffold0063 (70-213)||(36830-36972)
scaffold0063 (118-213)||(49325-49419)
[»] scaffold0483 (1 HSPs)
scaffold0483 (19-110)||(9243-9335)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 3270755 - 3270543
Alignment:
Q  10 ggagcagcagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgcca 109  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| | |||||||||||| |||||||||  ||||| |||    
T  3270755 ggagcaacagagactggttcaaacgaaccacaacgtctcactacacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccacca 3270656  T
Q  110 gagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaacc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3270655 gagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggtaggatctatctctccctctaaacc 3270556  T
Q  210 ctcacgctctctg 222  Q
    ||||| |||||||    
T  3270555 ctcactctctctg 3270543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 3268536 - 3268331
Alignment:
Q  17 cagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccag 116  Q
    ||||||||||||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| ||||||||   ||||||||||||||||    
T  3268536 cagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgattacgtaaccgccagagccag 3268437  T
Q  117 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgc 216  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| |||||||||||||||||||||||||| |    
T  3268436 gtgtgtcattacaatggctctgcagccctccacctctataaataggggactcacggaagtctccaaggtagaatctatctctccctctaaaccctcactc 3268337  T
Q  217 tctctg 222  Q
    ||||||    
T  3268336 tctctg 3268331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 12885481 - 12885277
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| |||||  | || |||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||    
T  12885481 agagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccagg 12885382  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||  ||||||||||||||| |||||||||| ||||||||||||||| ||    
T  12885381 tgtgccattacaatggctctgcagccctccacctttataaataggggactcacaacagtccccaaggtagaatctatctcttcctctaaaccctcaccct 12885282  T
Q  218 ctctg 222  Q
    |||||    
T  12885281 ctctg 12885277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 10985713 - 10985915
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  ||||||| ||||||||||    
T  10985713 gagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgcgagagccaggt 10985812  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||| |||| |||| |||||||||| |||    
T  10985813 gtgccattacaacggctctgcagccatccacctctataaataggggactcacggcagt-cccaaggtagaatctacctcttcctccaaaccctcactctc 10985911  T
Q  219 tctg 222  Q
    ||||    
T  10985912 tctg 10985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 12217757 - 12217561
Alignment:
Q  17 cagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccag 116  Q
    ||||||||||||||||||||| |||| ||||| || || ||||| |||||||||||| |||||||||||||| | |||||||  ||||||||||||||||    
T  12217757 cagagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctggcggttacacttcctacgatttcgtaaccgccagagccag 12217658  T
Q  117 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgc 216  Q
    ||      ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| ||| |    
T  12217657 gt------ttacaacggctctgcagccctccacctctataaataggggactcacgacagtccccaaggtagaatctatctctccctctaaacccgcactc 12217564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 21332543 - 21332746
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| ||||| ||||| |||||| ||||||||| | ||||||||| |||| ||| |||||  ||| |||||||||||||    
T  21332543 agagactggttcaaacgaaccacaacgtctctctacacgttcccacaataaactttctggcggttatacttcccatgatttcgtaagcgccagagccagg 21332642  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    ||||||| |||||||||||||||||||||||||||| ||||||| |||||||  |||||  ||||||||| |||||||||| |||| |||||||||| ||    
T  21332643 tgtgccactacaacggctctgcagccctccacctctgtaaataggggactcaaagcagtttccaaggtagaatctatctcttcctc-aaaccctcactct 21332741  T
Q  218 ctctg 222  Q
    |||||    
T  21332742 ctctg 21332746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 49402893 - 49402697
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcacta--catgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||| |||||||||| ||||||| ||||| ||   || ||| ||||||||| |||| |||||||||||||||||||||| |  |||||||||||||| ||    
T  49402893 agaccggttcaaacggactacaacgtctctctctgcacgtttccgcaataatctctatggcggttacactttccacgatctcgtaaccgccagagcctgg 49402794  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||  ||||||||||| |||| || ||| ||||||||| | |||||||    
T  49402793 tgtgccattacaacggctctgcagccctccacctctatatataggggactcatagcagtccccaaagtagaatatatatctccctcttatccctcac 49402697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 25239895 - 25239695
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||||||||||||||||  ||| |||||  | || |||||||||||||||||   ||||||||||||| |||| ||||  |||||| |||||  |||    
T  25239895 agagactggttcaaacgaaccccaaagtctctttccacgttcccgcaataaactcacaggcggttacacttcccacaatttcgtaaccgtcagagtaagg 25239796  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| |||| ||| || ||| |||||||||| ||    
T  25239795 tgtgccattacaacggctctgcagccctccacctctataaataggggactaaatgcagtccccaaggtagaatctttctttctctc-aaaccctcactct 25239697  T
Q  218 ct 219  Q
    ||    
T  25239696 ct 25239695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 219
Target Start/End: Complemental strand, 45313349 - 45313147
Alignment:
Q  15 agcagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagcc 114  Q
    |||| ||||||||||||||||||||||| ||||| || || |||||| |||||| |||| |||||||||||||| |||||||||  ||||||||||||||    
T  45313349 agcaaagactggttcaaacgaactacaacgtctctctgcacgttccc-caataatctctctggcggttacacttcccacgatttcgtaaccgccagagcc 45313251  T
Q  115 aggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
     |||||||||||||||||| | |||| ||||| ||||||||| | || | |||||   ||||||||||||||| ||||| ||||  | ||||||||||||    
T  45313250 tggtgtgccattacaacggatttgcaaccctctacctctatata-agggaactcataacagtccccaaggtagaatctaactctttcactaaaccctcac 45313152  T
Q  215 gctct 219  Q
     ||||    
T  45313151 tctct 45313147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 9901739 - 9901901
Alignment:
Q  57 ttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctata 156  Q
    |||||||||||| |||| | |||||||||| | |||||||||  |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9901739 ttcccgcaataatctctctagcggttacacgtcccacgatttcgtaaccgtcagagccaggtgtgccattacaacggctctgcaaccctccacctctata 9901838  T
Q  157 aatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
     |||| ||||||   ||||||| |||||||| | | || ||||||||| ||||||||| ||||    
T  9901839 tataggggactcttagcagtcctcaaggtagaaccgatatctccctcttaaccctcactctct 9901901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 17282489 - 17282658
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||| |||||||  ||| |||||  | || ||||||||||||||| |    |||||||||||| |||||| ||  |||||| |||||  |||    
T  17282489 agagactggttctaacgaaccccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcgtaaccgtcagagtaagg 17282588  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtag 187  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  17282589 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtag 17282658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 16396266 - 16396389
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||| ||||| |||| ||||| ||||| ||||||||||||||| || |||||||||||||| ||| ||||| |||| |||||||| |||||    
T  16396266 gagactggttcaagcgaaccacaacgtctctctacacgttcccgcaataaacactctggcggttacacttcccatgatttcctaatcgccagagtcaggt 16396365  T
Q  119 gtgccattacaacggctctgcagc 142  Q
    |||||| |||||||||||||||||    
T  16396366 gtgccactacaacggctctgcagc 16396389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 192
Target Start/End: Complemental strand, 13861507 - 13861340
Alignment:
Q  25 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 124  Q
    |||||||||||||  ||| |||||  | || |||||||||||||||||   ||| ||||||||| |||||||||  |||| |  ||||  ||||||||||    
T  13861507 ggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacacttcccacgatttcgtaactgttagagtaaggtgtgcca 13861408  T
Q  125 ttacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    ||||||||||| ||||||||||||||||||||||||| | |||||  |||||||||||||||| ||||    
T  13861407 ttacaacggctttgcagccctccacctctataaatagggaactcaatgcagtccccaaggtagaatct 13861340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 26780824 - 26780994
Alignment:
Q  28 tcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccatta 127  Q
    |||||||||| |||| || || || || ||||||||||||| |||| |||||||||||||| ||||| |||  ||||| |||||| | |||||| |||||    
T  26780824 tcaaacgaaccacaacgtttctctgcacgttcccgcaataatctctctggcggttacacttcccacgttttcgtaaccaccagagtctggtgtgtcatta 26780923  T
Q  128 caacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctct 198  Q
    |||||||||||||||||||||||||| |  |||| ||| |||   ||||||||||||||| ||||| ||||    
T  26780924 caacggctctgcagccctccacctctctgtataggggagtcataacagtccccaaggtagaatctaactct 26780994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 214
Target Start/End: Complemental strand, 8082207 - 8082050
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    ||||||||||| |  ||| ||||||||||||||||||||||||  |||| |   || |||||||||||||||||| |||||||||| |||||||||||||    
T  8082207 gttcccgcaattatttctctggcggttacactttccacgatttcgtaactgttggacccaggtgtgccattacaatggctctgcagtcctccacctctat 8082108  T
Q  156 aaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    | |||| ||||||   ||||||||||| |||| ||||| ||||  ||||||||||||||    
T  8082107 atataggggactcttagcagtccccaatgtagaatcta-ctctttctctaaaccctcac 8082050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 28892014 - 28891919
Alignment:
Q  113 ccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaacc 209  Q
    |||| |||||||||||||||||| |||||| ||||||||||||| |||| ||||||     |||||||||||||| |||||| ||| ||||||||||    
T  28892014 ccagatgtgccattacaacggctatgcagctctccacctctatatataggggactcttaagagtccccaaggtagaatctat-tcttcctctaaacc 28891919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 34845514 - 34845635
Alignment:
Q  76 ggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcag 175  Q
    ||||||||||||| |||||||||  |||||| ||||  || |||||||||||||||| |||||||  |  ||||||||||| | || || |||   ||||    
T  34845514 ggcggttacacttcccacgatttcgtaaccgtcagacacatgtgtgccattacaacgactctgcattcacccacctctatataaagggggctcctcgcag 34845613  T
Q  176 tccccaaggtaggatctatctc 197  Q
    |||||||||||| |||| ||||    
T  34845614 tccccaaggtagaatctctctc 34845635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 15455558 - 15455466
Alignment:
Q  101 taaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatcta 193  Q
    ||||||||| |  |||||||||| | |||||| || |||| ||||||||||||||| ||| | |||||   |||||||||||||||| |||||    
T  15455558 taaccgccaaacacaggtgtgccttcacaacgactttgcatccctccacctctatatatataagactcttagcagtccccaaggtagaatcta 15455466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 18284661 - 18284724
Alignment:
Q  154 ataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    |||||||| |||||||  |||||||||||||||| |||  ||||| ||||||||||||||| ||||    
T  18284661 ataaataggggactcaatgcagtccccaaggtagaatc--tctcttcctctaaaccctcactctct 18284724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 21 - 214
Target Start/End: Original strand, 30770189 - 30770381
Alignment:
Q  21 gactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgt 120  Q
    ||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  30770189 gactggttcaaacgaac-acaacgtctctctacacgttcccgcaataaactctttggcagttacactttccacgatttcgtaaccgccagagccaggtgt 30770287  T
Q  121 gccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  30770288 gccattacaacggctctgcagcactccacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaccctcac 30770381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 20093738 - 20093545
Alignment:
Q  17 cagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccag 116  Q
    ||||||||||||||||||||| |||| ||||| || ||  |||||||||||| |||||||| |||||||||| |||||||||  ||||||| || |||||    
T  20093738 cagagactggttcaaacgaaccacaacgtctctctgcacattcccgcaataagctctttggtggttacacttcccacgatttcgtaaccgctagggccag 20093639  T
Q  117 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccc 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  20093638 gtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggtagaaactatctctccctccaaaccc 20093545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 21802650 - 21802447
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    |||||||||||| |||||| |||| ||||| || || |||| ||||||||||||| | || ||||||||| | |||||||  ||||| ||||||||||||    
T  21802650 gagactggttcagacgaaccacaacgtctctctgcaggttctcgcaataaactctctcgctgttacacttcctacgatttcgtaaccaccagagccaggt 21802551  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||||||||| |||    
T  21802550 gtgccattacaacggctctgtagccctcaacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaccctcactctc 21802451  T
Q  219 tctg 222  Q
    ||||    
T  21802450 tctg 21802447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 9548968 - 9549171
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||||  |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  ||||||| ||||||||||    
T  9548968 gagactggttcaaacgaaacacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggt 9549067  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    |||||  |||||||||||||||||||||||||| |||||| || |||||||  | |||||||||||||  |||||||||| ||||||||||||||| |||    
T  9549068 gtgcctctacaacggctctgcagccctccacctttataaaaaggggactcaaagtagtccccaaggtaaaatctatctcttcctctaaaccctcactctc 9549167  T
Q  219 tctg 222  Q
    ||||    
T  9549168 tctg 9549171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 29165049 - 29164849
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||||| |||| ||||| || || |||||||||||||||||| | || ||||||||| |||||||||  ||||  | |||| |||||    
T  29165049 gagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcagttacacttcccacgatttcgtaacttctagagtcaggt 29164950  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    ||| ||||||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| |||    
T  29164949 gtgtcattacaacggctctgcagccgtccacctctataaataggggactcatagcagtccccaaggtagaatctatctcttcctctaaaccctcactctc 29164850  T
Q  219 t 219  Q
    |    
T  29164849 t 29164849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 7595549 - 7595360
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||| ||||||||||||| |||||||||| || || |||||||||||||||||| |||||||||||||| |||||||||  ||||  |||| |||||||    
T  7595549 gagaccggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaacatccagcgccaggt 7595450  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaacc 209  Q
    |||| |||||||||||| ||||||||||||||||||||||||| ||| ||| | |||  |||||||||| |||||||||| ||| ||||||    
T  7595449 gtgctattacaacggctttgcagccctccacctctataaataggggaatcatgacag-acccaaggtagaatctatctcttcctttaaacc 7595360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 2249992 - 2250179
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 119  Q
    |||||||||||||||||| |||| ||||| || || |||||||||||||  ||| | ||||||||| || |||||||||  ||||||||| |||| ||||    
T  2249992 agactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataatatctctagcggttacaattcccacgattttgtaaccgccaaagcctggtg 2250091  T
Q  120 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaa 207  Q
    ||||||||||||||||||||| ||||||||||||||| |||| |||||||  |||  |||||| |||| |||||||||| ||||||||    
T  2250092 tgccattacaacggctctgcaaccctccacctctatatataggggactcatagcaaaccccaatgtagaatctatctcttcctctaaa 2250179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 47295681 - 47295854
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    |||||||||||||||||||  ||| ||||| || ||  ||||||||||||||||    ||| |||||||| |||||||||  |||||| |||||  ||||    
T  47295681 gagactggttcaaacgaaccccaacgtctctctccaccttcccgcaataaactcacaagcgtttacacttcccacgatttcgtaaccgtcagagtaaggt 47295780  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  47295781 gtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 47295854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 22704009 - 22703894
Alignment:
Q  106 gccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctcta 205  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||  ||||||    
T  22704009 gccagaaccaggtgtgccattacaacggctctgcagccctccacctctataaatatgggactcacagcagtccccaaggtagaatctatctcgtcctcta 22703910  T
Q  206 aaccctcacgctctct 221  Q
    ||||||||| ||||||    
T  22703909 aaccctcactctctct 22703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 22705800 - 22705602
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||| |||||||||||| |||| || || || || ||||| |||||||| ||| |  ||||||||||| ||| |||||  |||||||||||||||||    
T  22705800 agagactagttcaaacgaaccacaacgtttctctgcacgttcctgcaataaattctctaccggttacacttcccatgatttcgtaaccgccagagccagg 22705701  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    ||||||||||||| |||||||||| ||||||||||||||||||  ||||||||        ||||||||| |||||||||| ||||||||||||||| ||    
T  22705700 tgtgccattacaatggctctgcagtcctccacctctataaatacgggactcac------aaccaaggtagaatctatctcttcctctaaaccctcactct 22705607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 21592876 - 21593045
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||||||||||||||||  ||| |||||  | || ||||||| ||||| ||    | ||||||||||| |||||||||  |||||| |||||  |||    
T  21592876 agagactggttcaaacgaaccccaacgtctctttccacgttcccgtaataagctaacagacggttacacttcccacgattttgtaaccgtcagagtaagg 21592975  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtag 187  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  21592976 tgtgccattacaacggctcagcagccctccacctctataaataggggactcaatgcagtccccaaggtag 21593045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 18153329 - 18153155
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||||||||||||||||  ||| |||||  | || |||||| ||||||||||   ||||||||||||| |||| ||||  |||||| |||||  ||     
T  18153329 agagactggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcgcaggcggttacacttcccaccatttcgtaaccgtcagagtaagc 18153230  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||||||  ||| |||||||||||| ||||    
T  18153229 tgtgccattacaacgactcggcagccctccacctctataaataggggactcaatgcattccccaaggtagaatct 18153155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 38612751 - 38612607
Alignment:
Q  25 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 124  Q
    ||||||||||||| |||| ||| | || || |||||| |||||| |||| |||| ||||||||| |||||||||  |||||||||||||| ||||| |||    
T  38612751 ggttcaaacgaaccacaacgtccctctgcacgttcccacaataatctctctggcagttacacttcccacgattttgtaaccgccagagcctggtgtacca 38612652  T
Q  125 ttacaacggctctgcagccctccacctctataaatagaggactca 169  Q
    |||||||||||||||||  ||||||||||||| ||| | ||||||    
T  38612651 ttacaacggctctgcagatctccacctctatatatatatgactca 38612607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 18185825 - 18185662
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||||||||||||||||  ||| |||||  | ||||||||||||||||||||    |||||||||||| || ||||||  |||||| |||||  |||    
T  18185825 agagactggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcgcaagcggttacacttcccgcgatttcgtaaccgtcagagtaagg 18185726  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtcccca 181  Q
    |||||| ||| ||||||||||||||||||||| | ||| ||||| |||||||  ||||||||||    
T  18185725 tgtgccgttaaaacggctctgcagccctccacatttattaataggggactcaatgcagtcccca 18185662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 70 - 213
Target Start/End: Original strand, 28794078 - 28794220
Alignment:
Q  70 ctctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactca 169  Q
    |||| |||||||||||||| |||||||||  |||||| ||||  || ||||||||||||||||||| |||||||   ||||| |||| |||| ||||||     
T  28794078 ctctctggcggttacacttcccacgatttcgtaaccgtcagacacacgtgtgccattacaacggctatgcagccactcacctttatatataggggactct 28794177  T
Q  170 cggcagtccccaaggtaggatctatctctccctctaaaccctca 213  Q
       ||||||||||||||| |||||| ||||||||||||||||||    
T  28794178 taacagtccccaaggtagaatctat-tctccctctaaaccctca 28794220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 30764982 - 30765114
Alignment:
Q  21 gactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgt 120  Q
    ||||||||||| ||||| ||||||||||  | ||  |||||||||| |  ||| |||||||||||||| |||||||||  || ||| | || | ||||||    
T  30764982 gactggttcaagcgaaccacaatgtctctttgcacattcccgcaattatttctctggcggttacacttcccacgatttcgtacccgtcggacctaggtgt 30765081  T
Q  121 gccattacaacggctctgcagccctccacctct 153  Q
    |||| |||||| |||||||||||||||||||||    
T  30765082 gccactacaacagctctgcagccctccacctct 30765114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 47414 - 47618
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||| ||||  ||||||||||||||| |    
T  47414 agagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacaattttgtaaccgccagagccaag 47513  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| ||    
T  47514 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcagtccccaaggtagaatctatctcttcctctaaaccctcactct 47613  T
Q  218 ctctg 222  Q
    |||||    
T  47614 ctctg 47618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 5931391 - 5931187
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| ||||| |||||  ||||||||||||||||| |||||||| ||||| |||||||||  ||||||||||| |||||    
T  5931391 agagactggttcaaacgaaccacaacgtctctctacacattcccgcaataaactctctggcggttgcacttcccacgatttcataaccgccagaaccagg 5931292  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||| ||    
T  5931291 tgtgtcattacaacggctctgcagccctccacctctataaataggggactcacgacagtccccaagatagaatctatctctccctctaaaccctcactct 5931192  T
Q  218 ctctg 222  Q
    |||||    
T  5931191 ctctg 5931187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 28068023 - 28068223
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||| |  ||| ||||| || || ||||| ||||||||||||  ||||||||||||| |||||||||  ||||||||||||||||||    
T  28068023 gagactggttcaaacgagcctcaacgtctctctgcacgttcctgcaataaactctccggcggttacacttcccacgatttcgtaaccgccagagccaggt 28068122  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| ||||||| |||| ||||| ||||||||||||||| |||    
T  28068123 gtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccctaaggtagaatctctctcttcctctaaaccctcactctc 28068222  T
Q  219 t 219  Q
    |    
T  28068223 t 28068223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 22922645 - 22922838
Alignment:
Q  26 gttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccat 125  Q
    |||||||||||| ||||  |||| ||  ||||| | |||||||||||| |||||||||||||| |||||||||  ||||||| ||||||||||||| ||     
T  22922645 gttcaaacgaaccacaacctctctctgtatgtttcagcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggtgtgtcac 22922744  T
Q  126 tacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    ||||||||||||| |||||||||||||||||||||| |||||||   || |||||||||||| |||||||||| ||||||||||||||| ||||    
T  22922745 tacaacggctctgtagccctccacctctataaataggggactcataacaatccccaaggtagaatctatctcttcctctaaaccctcactctct 22922838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 42792681 - 42792487
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||| |||||||||||   |||| || || || || |||||||||||||||||| | |||||||||||| |||||||||  ||||||||||||||||||    
T  42792681 gagaccggttcaaacgagtcacaacgtatctctgcacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggt 42792582  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctca 213  Q
    |||||| |||||| ||||||||||||||||||||||||| ||| |||||||   || |||||||||||| ||||||||| | |||||||||||||    
T  42792581 gtgccactacaactgctctgcagccctccacctctataactaggggactcataacaatccccaaggtagaatctatctccctctctaaaccctca 42792487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 15620191 - 15620379
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||| ||||||||||| | |||| ||||| || || |||||| ||||||||||| |||||||||||||| |||| ||||  |||||| |||||||| ||    
T  15620191 gagacgggttcaaacgagccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcccacaatttcgtaaccgtcagagccaagt 15620290  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaa 207  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||| ||||    
T  15620291 gtgccattacaacagctctacagcccttcacctctataaataggggactcatagcagtccccaaggtagaatctatctcttcctataaa 15620379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 41037645 - 41037854
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    |||||||||||||| |||| | ||  |||  || || |||| ||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||    
T  41037645 gagactggttcaaatgaacgataacatctgtctgcacgttcacgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggt 41037744  T
Q  119 gtgccattacaacggctctgcagccctccacc---------tctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaacc 209  Q
    |||||||||||||||||| |||||||||||||         ||||||||||| |||||||  |||||||||||||||| || ||||||| ||||||||||    
T  41037745 gtgccattacaacggctccgcagccctccacctctataaattctataaataggggactcatagcagtccccaaggtagaatatatctcttcctctaaacc 41037844  T
Q  210 ctcacgctct 219  Q
    ||||| ||||    
T  41037845 ctcactctct 41037854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 38608430 - 38608267
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||   |||||||||||| || |||||||||||||    
T  38608430 gttcccgcaataaactctttggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcctccacaacggctctgtagacctccacctctat 38608331  T
Q  156 aaatagaggactcacggcagtccccaaggtaggatctatctctccctct-aaaccctcacgctct 219  Q
    |||||| |||||||  |||||||| ||||||| |||| | ||||||||| |||||||||| ||||    
T  38608330 aaataggggactcaatgcagtccctaaggtagaatct-tttctccctctaaaaccctcactctct 38608267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 22922086 - 22922241
Alignment:
Q  64 aataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagag 163  Q
    |||||||| | |||||||||||||| |||||||||  ||||| ||||||||||||||| || ||||||||||||| |||||||||||||||||||||| |    
T  22922086 aataaactttctggcggttacacttcccacgattttgtaaccaccagagccaggtgtgtcactacaacggctctgtagccctccacctctataaataggg 22922185  T
Q  164 gactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    ||||||   |||| |||||||||| |||||||||| ||||||||||||||| ||||    
T  22922186 gactcataacagttcccaaggtagaatctatctcttcctctaaaccctcactctct 22922241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 8244717 - 8244508
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| |||||  | || |||||| ||||||||||| | ||| ||||||||||||||||||  ||||||||||||||| |    
T  8244717 agagactggttcaaacgaaccacaacgtctctttgcacgttcccccaataaactctctagcgattacactttccacgatttcgtaaccgccagagccatg 8244618  T
Q  118 t------gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccct 211  Q
    |      ||||||| ||| || |||||||||||||||||||||||||||  ||||||||  |||||| |||||||| |||||||||| |||| |||||||    
T  8244617 taatgatgtgccatcaca-cgactctgcagccctccacctctataaataagggactcacatcagtcctcaaggtagaatctatctcttcctcaaaaccct 8244519  T
Q  212 cacgctctctg 222  Q
    ||| |||||||    
T  8244518 cactctctctg 8244508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 23495549 - 23495375
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||| |||||||||||||  ||| |||||  | || |||||||||||||||||   | ||||||||||| |||||||||  |||||| |||||  |||    
T  23495549 agagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacagacggttacacttcccacgatttcgtaaccgtcagagttagg 23495450  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||| |||| ||||    
T  23495449 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaatgtagaatct 23495375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 36712648 - 36712822
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||| ||||||||||||  ||| |||||  | || |||| ||||||||| ||   || ||||||||||||||||||||  |||||| |||||  |||    
T  36712648 agagactagttcaaacgaaccccaacgtctctttccacgttctcgcaataaaatcgcaggtggttacactttccacgatttcgtaaccgtcagagttagg 36712747  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  36712748 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 36712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 20899595 - 20899762
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||||||||||||||||  ||| |||||  | || |||||||||||||||||   ||||||||||||| |||||||||  |||||| |||||  |||    
T  20899595 agagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagttagg 20899694  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggt 185  Q
    |||||||||||||||  ||||||||||||||||| ||||||||| |||||||  ||||||||||||||    
T  20899695 tgtgccattacaacgaatctgcagccctccacctttataaataggggactcaatgcagtccccaaggt 20899762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 5590696 - 5590870
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||||||||||||||||  ||| |||||  | ||  ||||||||||||||||   ||||||||||||| |||| ||||  |||||| |||||  |||    
T  5590696 agagactggttcaaacgaaccccaacgtctctttccacattcccgcaataaactcgcaggcggttacacttcccacaatttcgtaaccgtcagagtaagg 5590795  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| |||  |||||||||||||||| ||||    
T  5590796 tgtgccattacaacggctctgctgccctccacctctataaataggggattcaatgcagtccccaaggtagaatct 5590870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 19329925 - 19330052
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 119  Q
    |||| ||||||||||| | |||| ||  | || |||||||||||||||| |||| |||||||||||||| |||||||||  |||||||||||||  ||||    
T  19329925 agaccggttcaaacgagccacaacgttactctgcatgttcccgcaataatctctctggcggttacacttcccacgatttcgtaaccgccagagcttggtg 19330024  T
Q  120 tgccattacaacggctctgcagccctcc 147  Q
    ||||||||||| ||||||| ||||||||    
T  19330025 tgccattacaatggctctgtagccctcc 19330052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 33622489 - 33622653
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgcc---agagcc 114  Q
    ||||||||||| ||||||||  ||| |||||  |  | ||||| |||||||||||   ||||||||||||| ||| |||||  ||||| ||   ||||      
T  33622489 agagactggtttaaacgaaccccaacgtctctttctacgttccagcaataaactcacaggcggttacacttcccaggatttcgtaaccaccgtcagagta 33622588  T
Q  115 aggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccc 179  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  33622589 aggtgtgtaattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccc 33622653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 22510182 - 22510102
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgattt 98  Q
    ||||||||||| ||||||||| ||| |||||  | ||||||||||||||||||||   ||||||||||||| |||||||||    
T  22510182 agagactggttaaaacgaactccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacgattt 22510102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 19330051 - 19330092
Alignment:
Q  178 cccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    |||||||||| |||||||||| ||||||||||||||| ||||    
T  19330051 cccaaggtagaatctatctcttcctctaaaccctcactctct 19330092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 3770461 - 3770257
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||||||||||||||||  ||| ||||| || || ||| |||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||    
T  3770461 agagactggttcaaacgaacctcaacgtctctctgcacgtttccgcaataaactctctagcggttacactttccacgattttgtaaccgccagagccagg 3770362  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||||| |||||||||| ||| ||||||||||| ||    
T  3770361 tgtgccattacaacggctctgcagccctccacctctataaataggggattcacaacagtccccaaggtagaatctatctcttcctttaaaccctcactct 3770262  T
Q  218 ctctg 222  Q
    |||||    
T  3770261 ctctg 3770257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 41266197 - 41266399
Alignment:
Q  21 gactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgt 120  Q
    ||||||||||||||||| |||| ||||| || || ||||||||||||||||||  |||||||||||||  |||||| |  ||||||||||||||||||||    
T  41266197 gactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctcgggcggttacacttctcacgatatcgtaaccgccagagccaggtgt 41266296  T
Q  121 gccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctct-aaaccctcacgctct 219  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||| |||||||||| ||||    
T  41266297 gccattacaacggctctgcagccctccacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaaccctcactctct 41266396  T
Q  220 ctg 222  Q
    |||    
T  41266397 ctg 41266399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 23755820 - 23756021
Alignment:
Q  21 gactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgt 120  Q
    |||||||||||| |||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  ||||||| ||||||||||||    
T  23755820 gactggttcaaaagaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgatttcgtaaccgctagagccaggtgt 23755919  T
Q  121 gccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctctc 220  Q
    ||||||||||||||||| ||||| ||||||||||||||||| ||||||||  ||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  23755920 gccattacaacggctctacagccttccacctctataaataggggactcacaacagtccccaaggtagaatctatctcttcctctaaaccctcactctctc 23756019  T
Q  221 tg 222  Q
    ||    
T  23756020 tg 23756021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 25133933 - 25134136
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||||| |||| |||||  | || |||||||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||    
T  25133933 gagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacacttaccacgatttcgtaaccgccagagccaggt 25134032  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||||| |||||||||| |||  |||    
T  25134033 gtgccactacaacggctctgcagccctccacctctataaataggggactcatagcagtccctaaggtagaatctatctcttcctctaaaccatcattctc 25134132  T
Q  219 tctg 222  Q
    ||||    
T  25134133 tctg 25134136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 42534129 - 42534322
Alignment:
Q  26 gttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccat 125  Q
    |||||||||| | |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||| ||||||||    
T  42534129 gttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccagatgtgccat 42534228  T
Q  126 tacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||| |||  || |||||||||||| ||||    
T  42534229 tacaacggctctgcagccctccacctctataaataggggactcatagcagtccccaaggtagaatctaactcctccgctaaaccctcactctct 42534322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 23929997 - 23929797
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||| |||||||| |||| |||||||||| || || |||||| |||||||||||  ||||||||||||| ||||||||   ||||||||||||||||||    
T  23929997 gagaccggttcaaatgaaccacaatgtctctctgcacgttcccacaataaactctccggcggttacacttcccacgattccgtaaccgccagagccaggt 23929898  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    ||||||||||||||||||||||||||||||||||| || |||| |||||||| |||||||||||||||  ||||| |||| ||||||||||||||| |||    
T  23929897 gtgccattacaacggctctgcagccctccacctctttatataggggactcactgcagtccccaaggtaaaatctaactcttcctctaaaccctcactctc 23929798  T
Q  219 t 219  Q
    |    
T  23929797 t 23929797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 212
Target Start/End: Complemental strand, 19092920 - 19092728
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 119  Q
    ||||| |||||||||||| |||| ||||| || || ||||||||||||| |||| |||||||||||||| |||| | ||   |||||| |||| | ||||    
T  19092920 agactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataatctctctggcggttacacttcccacaagttcgaaaccgcgagagtctggtg 19092821  T
Q  120 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctc 212  Q
    || |||||||||||||||||||||| ||||||||||| |||| |||||||  ||||||||||||||||||| ||||||| |||||||||||||    
T  19092820 tgtcattacaacggctctgcagccccccacctctatatataggggactcatagcagtccccaaggtaggatttatctcttcctctaaaccctc 19092728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 219
Target Start/End: Complemental strand, 29568507 - 29568315
Alignment:
Q  26 gttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccat 125  Q
    |||||||||| | |||| ||||| ||||| ||||| |||||||||||| | |||||||||||| |||||||||  |||||||||||||||||||| ||||    
T  29568507 gttcaaacgagccacaacgtctctctacacgttcc-gcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggtgtaccat 29568409  T
Q  126 tacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    ||||||||||||| |||||||||||||||||||| | |||||||  |||  | ||||| ||| |||||| ||| ||||||||||||||| ||||    
T  29568408 tacaacggctctgtagccctccacctctataaattggggactcatagcaaccgccaagttagaatctatgtcttcctctaaaccctcactctct 29568315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 3105404 - 3105204
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||| ||||||||||| | |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  |||||   ||||  ||||    
T  3105404 gagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcataaccatgagagttaggt 3105305  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    ||| ||||||||||||||| ||  ||||||||||||||||||  |||||||  |||||||||||||||| ||||| |||| |||||||| |||||| |||    
T  3105304 gtgtcattacaacggctctacaatcctccacctctataaatatgggactcatagcagtccccaaggtagaatctaactcttcctctaaaacctcactctc 3105205  T
Q  219 t 219  Q
    |    
T  3105204 t 3105204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 56 - 168
Target Start/End: Original strand, 26155019 - 26155131
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    ||||||||||||||| || |||||||||||||| |||||||||  ||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  26155019 gttcccgcaataaacgctctggcggttacacttcccacgatttcgtaaccaccatagccaggtgtgccattataacggctatgcagccctccacctctat 26155118  T
Q  156 aaatagaggactc 168  Q
    |||||| ||||||    
T  26155119 aaataggggactc 26155131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 27347370 - 27347196
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||||||||||||||||  ||| |||||  | || ||||||||||||||||| | ||| ||||||||| ||| |||||  |||||| ||| |  |||    
T  27347370 agagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcataggcagttacacttcccatgatttcgtaaccgtcagtgttagg 27347271  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    |||||||||||||||||| || |||||||||| |||||| |||| ||| |||  |||||||||||||||| ||||    
T  27347270 tgtgccattacaacggctttgtagccctccacgtctatacataggggattcaatgcagtccccaaggtagaatct 27347196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 26159154 - 26159236
Alignment:
Q  140 agccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctctctg 222  Q
    |||||||||||||||||||||| |||||||  ||||| |||||||||| |||||||||| ||||||||||||||| |||||||    
T  26159154 agccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctctaaaccctcactctctctg 26159236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 391659 - 391459
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    |||||| |||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||  ||||  ||||||||||||||||||    
T  391659 gagactagttcaaacgaaccacaacgtctctctgcaggttcccgcaataaactctctggcggttacacttcccataatttcgtaaccgccagagccaggt 391560  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| |||    
T  391559 gtgccattacaacggctctgcaaccctccacctctataaataggggactcatagcagtccccaaggtagaatctatctcttcctctaaaccctcactctc 391460  T
Q  219 t 219  Q
    |    
T  391459 t 391459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 380961 - 380767
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||||| |||| ||||| ||||| |||||||||||||| ||| ||||||||||||||  ||| ||||  ||||| ||||||||||||    
T  380961 gagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaagtctctggcggttacacttctcacaatttcgtaacctccagagccaggt 380862  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||  |||||||||| |||||||||||||||    
T  380861 gtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccccatggta-aatctatctcttcctctaaaccctcac 380767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 2085741 - 2085945
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||| |||||||||||| |||||||||| || ||||||||||||||||||    ||||  |||||||| |||||||||  |||||||||||||||||    
T  2085741 agagactagttcaaacgaaccacaatgtctctctgcatgttcccgcaataaacgacctggcaattacacttcccacgatttcgtaaccgccagagccagg 2085840  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| ||    
T  2085841 tgtgccattacaacggttctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatctatctcttcctctaaaccctcactct 2085940  T
Q  218 ctctg 222  Q
    |||||    
T  2085941 ctctg 2085945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 18040480 - 18040683
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||||||||  |||||| ||||||||||    
T  18040480 agagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgatttcgtaaccgtcagagccagg 18040579  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||  |||||||||||||||| ||| |||||| |||||||||| |||| ||    
T  18040580 tgtgccattacaacggctctgcagctctccacctctataaataggggactca-agcagtccccaaggtagaatcaatctcttcctctaaaccttcactct 18040678  T
Q  218 ctctg 222  Q
    |||||    
T  18040679 ctctg 18040683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 7999850 - 7999650
Alignment:
Q  17 cagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccag 116  Q
    ||||||||||||| ||||||| |||| ||||| || ||||||||||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||    
T  7999850 cagagactggttccaacgaaccacaacgtctctctgcatgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccag 7999751  T
Q  117 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgc 216  Q
    ||||| |||||||||||  |||||| |||||||||||||||| ||  |||||||||||||||||||||||| |||||||||| ||||||||||||||| |    
T  7999750 gtgtgtcattacaacgg--ctgcagtcctccacctctataaacaggagactcacggcagtccccaaggtagaatctatctcttcctctaaaccctcactc 7999653  T
Q  217 tct 219  Q
    |||    
T  7999652 tct 7999650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 18574007 - 18574220
Alignment:
Q  9 tggagcagcagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgcc 108  Q
    |||||||  ||||| |||||||||||||| |||| ||||| || || |||||| ||||||||||| |||||||||||||| |||||||||  ||||||||    
T  18574007 tggagcaaaagagagtggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcccacgatttcgtaaccgcc 18574106  T
Q  109 agagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtcccc---aaggtaggatctatctctccctcta 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| |||||   ||||||| |||||||||| ||||||    
T  18574107 agagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcattccccaagaaggtagaatctatctcttcctcta 18574206  T
Q  206 aaccctcacgctct 219  Q
    ||| ||||| ||||    
T  18574207 aactctcactctct 18574220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 24033965 - 24033762
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||||| |||||||||| || || |||||||||||||||||| ||||||||||||||||||||||||  ||||||||| || || ||    
T  24033965 gagactggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacactttccacgatttcgtaaccgccaaagtcaagt 24033866  T
Q  119 gtgccattacaacggctctgcagccctccacct---ctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacg 215  Q
    |||||||||||||||||||||| ||||||||||    ||||| ||| |||||||  ||||||||||| |||| |||||||||| |||||||||| ||||     
T  24033865 gtgccattacaacggctctgcaaccctccacctatattataactaggggactcatagcagtccccaatgtagaatctatctcttcctctaaaccttcact 24033766  T
Q  216 ctct 219  Q
    ||||    
T  24033765 ctct 24033762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 32009012 - 32009213
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||  ||||| || || ||||||||||||| |||| | ||| |||||||| |||||||||  |||||||||||| ||||    
T  32009012 agagactggttcaaacgaaccacagcgtctctctgcacgttcccgcaataatctctctagcgattacacttcccacgatttcgtaaccgccagagtcagg 32009111  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||  | | |||||||||||  |||||||||| ||||||||||||||| ||    
T  32009112 tgtgccattacaacggctctacagccctccacctctataaataggggactcaaagtactccccaaggtaaaatctatctcttcctctaaaccctcactct 32009211  T
Q  218 ct 219  Q
    ||    
T  32009212 ct 32009213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 7454666 - 7454866
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||| |||||| |||| | |||| |||||  | || |||||| ||||||||||| || ||||||||||| |||||||||  ||||||||||||||||||    
T  7454666 gagaccggttcatacgagccacaacgtctctatgcacgttcccacaataaactctatgacggttacacttcccacgatttcgtaaccgccagagccaggt 7454765  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||  |||||||||||| ||| |||||||||| ||| ||||||||||| |||    
T  7454766 gtgccattacaacggctctgcagccttccacctctataaataggggactcatagcagtccccaagttagaatctatctcttcctgtaaaccctcactctc 7454865  T
Q  219 t 219  Q
    |    
T  7454866 t 7454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 213
Target Start/End: Original strand, 10532801 - 10532983
Alignment:
Q  31 aacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaa 130  Q
    ||||||| |||| ||||| || || ||||| ||||||||| |  ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  10532801 aacgaaccacaacgtctctctccacgttcctgcaataaacaccctggcggttacactttccacgatttcgtaaccgccagagtcaggtgtgccattacaa 10532900  T
Q  131 cggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctca 213  Q
    ||||||||||||||||||||||||||||||| ||||| |  | |||||||||||||| || ||||||| | ||||||||||||    
T  10532901 cggctctgcagccctccacctctataaataggggacttaatggagtccccaaggtagaatttatctcttcatctaaaccctca 10532983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 11709562 - 11709373
Alignment:
Q  25 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 124  Q
    ||||||||||||| |||| ||||| || || |||||| |||||| |||| |||||||||||||| |||||||||  |||  ||||||||| |||||||||    
T  11709562 ggttcaaacgaaccacaacgtctctctgcacgttcccacaataatctctctggcggttacacttcccacgatttcgtaaatgccagagcctggtgtgcca 11709463  T
Q  125 ttacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    |||||||||||||||| ||||||||||||||| |||| |||||| | |||||||  ||||||| ||| |||||||||||| |||||||||    
T  11709462 ttacaacggctctgcaaccctccacctctatatataggggactctcagcagtccgaaaggtagaatcgatctctccctcttaaccctcac 11709373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 41280846 - 41280983
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    |||||||||||||||||| |||||||||||||| |||||||||  ||||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  41280846 gttcccgcaataaactctctggcggttacacttcccacgattttgtaacccccagagtcaggtgtgccattacaacggctctgcagtcctccacctctat 41280945  T
Q  156 aaatagaggactcacggcagtccccaaggtaggatcta 193  Q
    |||||| |||||||   ||||||||||||||| |||||    
T  41280946 aaataggggactcataacagtccccaaggtagaatcta 41280983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 24060757 - 24060563
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 119  Q
    |||| ||||| ||||||| ||||  |||| || |||||||| ||||||| |||| |||| ||||||||| | |||||||  |||||||||||||| ||||    
T  24060757 agaccggttctaacgaaccacaacatctctctgcatgttcctgcaataatctctctggcagttacacttcctacgattttgtaaccgccagagcctggtg 24060658  T
Q  120 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    |||||| |||||||||||||||||||||||||||||| |||  ||||||   |||||| ||||||||| ||||||| || |||||||||||||||    
T  24060657 tgccatcacaacggctctgcagccctccacctctatatataagggactcttagcagtctccaaggtagaatctatcgcttcctctaaaccctcac 24060563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 25820908 - 25820743
Alignment:
Q  27 ttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccatt 126  Q
    |||||||||||  ||| |||||  | || ||||| |||||||||||   ||||||||||||| |||||||||  |||||| |||||  ||||||||||||    
T  25820908 ttcaaacgaaccccaacgtctctttccacgttccagcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagtaaggtgtgccatt 25820809  T
Q  127 acaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    ||||||||| |||||||||||||||||| |||||| |||||||  |||||||||| ||||| ||||    
T  25820808 acaacggctttgcagccctccacctctaaaaataggggactcaatgcagtccccatggtagaatct 25820743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 33273604 - 33273701
Alignment:
Q  117 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||  | |||||||||||||| ||||||||||  ||||||||||||||    
T  33273604 gtgtgccattacaacggctctgcaaccctccacctctataaataggggactcataggagtccccaaggtagaatctatctctttctctaaaccctcac 33273701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 22609492 - 22609631
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    |||| |||||||||||||| || || |||| || ||||||| ||||||||||||| || ||||||||| |  ||||||||  ||||||||||||||||||    
T  22609492 gagattggttcaaacgaaccacgatatctctctgcatgttcacgcaataaactctctgtcggttacacatctcacgatttcgtaaccgccagagccaggt 22609591  T
Q  119 gtg--ccattacaacggctctgcagccctccacctctata 156  Q
    |||  |||| |||||| ||||||| |||||||||||||||    
T  22609592 gtgtaccatcacaacgactctgcaaccctccacctctata 22609631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 17775755 - 17775705
Alignment:
Q  172 gcagtccccaaggtaggatctatctctccctctaaaccctcacgctctctg 222  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  17775755 gcagtccccaaggtagaatctatctcttcctctaaaccctcactctctctg 17775705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 1788732 - 1788677
Alignment:
Q  137 tgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    |||||||||||||||||||||||||  ||||||  |||||| ||||||||| ||||    
T  1788732 tgcagccctccacctctataaataggagactcaatgcagtcaccaaggtagaatct 1788677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 33273523 - 33273598
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacga 95  Q
    |||| ||||||||||| | |||| ||||| || || |||||||||||||  ||| |||||||||||||| ||||||    
T  33273523 agaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataagttctatggcggttacacttcccacga 33273598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 22282161 - 22282225
Alignment:
Q  76 ggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgca 140  Q
    |||| ||||||||  || |||||  |||||||||||  || ||||||||||||||||||||||||    
T  22282161 ggcgattacacttctcaagatttcgtaaccgccagacacacgtgtgccattacaacggctctgca 22282225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 23574594 - 23574394
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||| ||| ||||||||||||||||| ||  |||| |||||||||| ||    
T  23574594 gagactggttcaaacgaaccacaacgtctctctacatgttctcgcaataaactctctggtggttacactttccacgacttcgtaacagccagagccaagt 23574495  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||  ||||||| |||||||| |||||||||| ||||||||||||||| |||    
T  23574494 gtgccattacaacggctctgcagccctctacctctataaataggggactcaaagcagtccacaaggtagaatctatctcttcctctaaaccctcactctc 23574395  T
Q  219 t 219  Q
    |    
T  23574394 t 23574394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 19860052 - 19860251
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 119  Q
    ||||||||||||||||||  ||| ||||| | |||||||||| |||||| |||| ||| |||||||||| |||||||||  |||||||||||||||||||    
T  19860052 agactggttcaaacgaaccgcaacgtctctcaacatgttcccacaataatctctctggtggttacacttcccacgatttcgtaaccgccagagccaggtg 19860151  T
Q  120 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    | ||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||| || ||||| | |||||||||| |||| ||||    
T  19860152 tcccattacaacggctccgcagccctccacctctataaataggggactcacagcagtccccaaggtagaatttatctattcctctaaaccgtcactctct 19860251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 18736200 - 18736007
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    |||| |||||||||||| | |||| ||||| ||||| |||||||||||||||||| ||||| ||| |||| |||| ||||  ||||||||||||||||||    
T  18736200 gagattggttcaaacgagccacaacgtctctctacacgttcccgcaataaactctctggcgattagacttcccacaatttcgtaaccgccagagccaggt 18736101  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctc 212  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||||| ||| || ||||||| |||||||||||||    
T  18736100 gtgccattacaacggctcagcagccctccacctctataaataggggactcatagcagtccccaagctagaatttatctcttcctctaaaccctc 18736007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 4409397 - 4409193
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| |||||  | || ||||||||||||||| |  | ||||||||||||  ||||||||  ||||||||||||| |||    
T  4409397 agagactggttcaaacgaaccacaacgtctctatgcacgttcccgcaataaacgccctagcggttacacttctcacgattttgtaaccgccagagcaagg 4409298  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||||| |||||||||| ||||||||||||||| ||    
T  4409297 tgtgccattgtaacggctttgcagccctccacctctataaatagaggattcaatgcagtccccaaggtagaatctatctcttcctctaaaccctcactct 4409198  T
Q  218 ctctg 222  Q
    |||||    
T  4409197 ctctg 4409193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 7968493 - 7968695
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| ||||| || || |||||| |||||||| |  ||||||||||||||||||| ||||  |||||||||||| ||||    
T  7968493 agagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaaccccctggcggttacactttccacaatttcgtaaccgccagagtcagg 7968592  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||||||||||||| |||||||||||||||||||||||| |||| |||||||  ||||||||||||| || |||||||| | ||||| ||||||||| ||    
T  7968593 tgtgccattacaacagctctgcagccctccacctctatatataggggactcaatgcagtccccaaggcagaatctatcttttcctcttaaccctcactct 7968692  T
Q  218 ctc 220  Q
    |||    
T  7968693 ctc 7968695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 14910805 - 14910605
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 119  Q
    |||| ||||||||||||| |||| ||||| || || |||||||||||||||||| |||||||||||||| |||| ||||  |||| |||||||| | |||    
T  14910805 agaccggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacaatttcgtaactgccagagcgatgtg 14910706  T
Q  120 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtag-gatctatctctccctctaaaccctcacgctc 218  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||  ||||| |||| ||||||||||||||| |||    
T  14910705 tgccattacaacggctttgcagccctccacctctatatataggggactcactgcagtccccaaggtagaaatctagctcttcctctaaaccctcactctc 14910606  T
Q  219 t 219  Q
    |    
T  14910605 t 14910605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 8306261 - 8306061
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||||||||||||||   |||| ||||| ||  | |||||||||||||||||| |||||||||||||||||| |||||  |||| || |||| ||||    
T  8306261 agagactggttcaaacgagtcacaacgtctctctgtaggttcccgcaataaactctctggcggttacactttccatgatttcataactgctagagtcagg 8306162  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||     |||||| ||||||||||||||| ||    
T  8306161 tgtgccattacaacggctctgcaaccctccacctctataaataggggactcacagcagtccccaaggtag----aatctcttcctctaaaccctcactct 8306066  T
Q  218 ctctg 222  Q
    |||||    
T  8306065 ctctg 8306061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 12738694 - 12738495
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 119  Q
    ||||| |||||||||||| |||| ||||| || || |||||||||||||||||| | | |||||||||| |||||||||  ||| || || |||||| ||    
T  12738694 agactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagaggttacacttcccacgatttcgtaatcgtcatagccagatg 12738595  T
Q  120 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||  ||||||||| |||||| |||||||||| ||||||||||| ||| ||||    
T  12738594 tgccattacaacggctctgcaaccctccacctctataaataggggactcatagcagtcccctaggtagaatctatctcttcctctaaacccccactctct 12738495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 15119719 - 15119921
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||| ||||||||||||| |||| ||||| || || |||||||||||||||||| | ||||||| |||| |||||||||  |||||||||||||||||    
T  15119719 agagacaggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcggttatacttcccacgattttgtaaccgccagagccagg 15119818  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    ||||||||||||  ||||||||| | |||||||||||||||||| |||||||   || |||||||||||| |||||||||| | ||||||||| ||| ||    
T  15119819 tgtgccattacactggctctgcaactctccacctctataaataggggactca--acaatccccaaggtagaatctatctcttcatctaaacccccactct 15119916  T
Q  218 ctctg 222  Q
    |||||    
T  15119917 ctctg 15119921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 18014464 - 18014652
Alignment:
Q  26 gttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccat 125  Q
    |||||||||||| ||||||| | |||  | ||||||||||||| |||| ||| ||||| |||| |||||||||  ||||||||||||| |||||||||||    
T  18014464 gttcaaacgaaccacaatgtttgactgtacgttcccgcaataatctctctggtggttagacttcccacgatttcgtaaccgccagagctaggtgtgccat 18014563  T
Q  126 tacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    |||||||||||||||||||||||||||||||  ||| |||||||  |||||||||||||||| ||| |||||| ||||| |||||||||    
T  18014564 tacaacggctctgcagccctccacctctatatgtaggggactcatagcagtccccaaggtagaatcaatctcttcctcttaaccctcac 18014652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 29482791 - 29482591
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||| ||||||||||| | |||| ||||| || ||||||||||||||||||||| |  | |||| |||| |||||||||  ||||||| ||| ||||||    
T  29482791 gagaccggttcaaacgagccacaacgtctctctgcatgttcccgcaataaactctctcacagttatacttcccacgatttcgtaaccgctagaaccaggt 29482692  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    |||||||||||||| |||| ||||||||||||||||||||||| |||||||  | |||||||||||||| |||||||||| ||||||||||| ||| |||    
T  29482691 gtgccattacaacgactctacagccctccacctctataaataggggactcatagtagtccccaaggtagaatctatctcttcctctaaacccccactctc 29482592  T
Q  219 t 219  Q
    |    
T  29482591 t 29482591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 18729121 - 18728926
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||| |||||||| || | |||| ||||| || || ||| |||||||||||||| |||||||||||||| |||||||||  || |||||||||||||||    
T  18729121 gagaccggttcaaaggagccacaacgtctctctgcacgtttccgcaataaactctatggcggttacacttcccacgattttgtacccgccagagccaggt 18729022  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    || ||||||||| | |||||||||||||||||||||||||||| |||||||   |||||| |||||||| |||||||||| ||||||| |||||||    
T  18729021 gttccattacaatgtctctgcagccctccacctctataaataggggactcataacagtcctcaaggtagaatctatctcttcctctaatccctcac 18728926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 29095016 - 29095190
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||| |||||||||||||  ||| |||||  | || |||||||||||||||||   ||||||||||||| |||||||||  |||||| |||||  |||    
T  29095016 agagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagttagg 29095115  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| ||||    
T  29095116 tgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatct 29095190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 24438560 - 24438760
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||| |||||||||||||| |||  |||||  | || ||||| ||||| |||||| |||||||||||||| |||||||||  ||||||| |||||||||    
T  24438560 agagattggttcaaacgaaccacatcgtctctttgcacgttcctgcaatcaactctatggcggttacacttcccacgatttcgtaaccgcaagagccagg 24438659  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||| |||||||||| |||||||  |||| |||||||||||||| |||||||| ||||| |||||||||  |||||||||| ||||||||||||||| ||    
T  24438660 tgtgtcattacaacgactctgcaatcctctacctctataaataggggactcacagcagt-cccaaggtataatctatctcttcctctaaaccctcactct 24438758  T
Q  218 ct 219  Q
    ||    
T  24438759 ct 24438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 18258594 - 18258794
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||| |||||||| |||| |||| ||||| |  ||  ||||||||||||||||||| || ||||||||| |||| ||||  |||||  |||||||||||    
T  18258594 gagaccggttcaaaggaaccacaacgtctctccgcacattcccgcaataaactctttagcagttacacttcccacaatttcgtaaccatcagagccaggt 18258693  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    |||||| |||||||||||| |||||||| |||||||||||||| ||||||||  ||||| ||||||||| |||||| | |  |||||||||||||| |||    
T  18258694 gtgccactacaacggctctacagccctctacctctataaataggggactcacaacagtctccaaggtagaatctatatttttctctaaaccctcactctc 18258793  T
Q  219 t 219  Q
    |    
T  18258794 t 18258794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 23524227 - 23524128
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    |||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  23524227 gttcccgcaataaactctttgatggttacactttccacgatttcttaaccgccagagccaggtgtgccattacaatggctctgcagccctccacgtctat 23524128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 15349665 - 15349796
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    |||||| |||||| |||| | |||||||||||| |||||||||  ||||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  15349665 gttcccacaataatctctctcgcggttacacttcccacgatttcgtaaccgccagacccaggtgtgctatcacaacggctctgcagccctccacctctat 15349764  T
Q  156 aaatagaggactcacggcagtccccaaggtag 187  Q
    | |||| ||||||   ||||||||||| ||||    
T  15349765 atataggggactcttagcagtccccaacgtag 15349796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 104 - 222
Target Start/End: Complemental strand, 18043455 - 18043337
Alignment:
Q  104 ccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctc 203  Q
    ||||||||| || | ||| ||||||||||||| ||||||||||||||||||||||||| ||||| |  |||||||||||||||| || ||||||| ||||    
T  18043455 ccgccagagtcatgcgtgtcattacaacggctttgcagccctccacctctataaataggggactaaatgcagtccccaaggtagaatttatctcttcctc 18043356  T
Q  204 taaaccctcacgctctctg 222  Q
    ||||||||||| |||||||    
T  18043355 taaaccctcactctctctg 18043337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 214
Target Start/End: Original strand, 15319015 - 15319172
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    ||||| ||||||| |||| | |||||||||||| |||||||||  ||||||||||| | |||||| |||| |||||| ||||||||||||||||||||||    
T  15319015 gttcctgcaataatctctctagcggttacacttcccacgatttcgtaaccgccagacctaggtgtaccatcacaacgactctgcagccctccacctctat 15319114  T
Q  156 aaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    | |||| | ||||   |||||||||||||||| ||| | ||||  ||||||||||||||    
T  15319115 atatagggaactcttagcagtccccaaggtagaatcga-ctctttctctaaaccctcac 15319172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 15369661 - 15369792
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    ||||||||||||| || | |||||||||||||| | || ||||  ||||||||||| | |||||| |||| | |||| |||| |||||||||||||||||    
T  15369661 gttcccgcaataatctgtctggcggttacacttcctacaatttcgtaaccgccagacctaggtgtaccatcataacgactctacagccctccacctctat 15369760  T
Q  156 aaatagaggactcacggcagtccccaaggtag 187  Q
    | |||||||||||   ||||||||||||||||    
T  15369761 atatagaggactcttagcagtccccaaggtag 15369792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 3876512 - 3876376
Alignment:
Q  25 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 124  Q
    |||||||| || |||||| |||||  | ||| |||||||||||| |||| || || |||||||| | |||||||  |||||||||||   ||||||| |     
T  3876512 ggttcaaatgagctacaacgtctctttgcatattcccgcaataatctctctgacgattacacttcctacgatttcgtaaccgccagacttaggtgtgtct 3876413  T
Q  125 ttacaacggctctgcagccctccacctctataaatag 161  Q
    | |||||||||||||||||||||||||||||| ||||    
T  3876412 tcacaacggctctgcagccctccacctctatatatag 3876376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 17757022 - 17757140
Alignment:
Q  24 tggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcc 123  Q
    ||||||||||||||  ||| |||||  | || |||||| ||||||||||   ||||||||||||| |||||||||  |||||| |||||  |||||||||    
T  17757022 tggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcacaggcggttacacttcccacgattttgtaaccgtcagagtaaggtgtgcc 17757121  T
Q  124 attacaacggctctgcagc 142  Q
    ||||||||||||| |||||    
T  17757122 attacaacggctcggcagc 17757140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 14480135 - 14480001
Alignment:
Q  78 cggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtc 177  Q
    |||||||| ||||||||||||  |||| ||| ||  || |||||||||||||| ||||||||||||  |||||  |||| |||| ||||||    |||||    
T  14480135 cggttacattttccacgatttcgtaactgccggacacacgtgtgccattacaatggctctgcagccacccaccggtatatataggggactcttaacagtc 14480036  T
Q  178 cccaaggtaggatctatctctccctctaaaccctca 213  Q
    ||| |||||| |||||||| ||||||||||||||||    
T  14480035 ccctaggtagaatctatct-tccctctaaaccctca 14480001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 21508637 - 21508716
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatt 97  Q
    |||||||||||||| ||||| |||  ||||| || || ||||| |||||||||||| |||||||||||||| ||||||||    
T  21508637 agagactggttcaatcgaaccacagcgtctctctgcacgttcctgcaataaactctatggcggttacacttcccacgatt 21508716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Original strand, 7099285 - 7099368
Alignment:
Q  78 cggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatag 161  Q
    |||||||||||| | ||||||  |||||||  || |||  |||||||||||||||||||||||  |  ||||||||||||||||    
T  7099285 cggttacacttttcccgatttcgtaaccgcgggacccacatgtgccattacaacggctctgcattcacccacctctataaatag 7099368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 8795345 - 8795262
Alignment:
Q  78 cggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatag 161  Q
    |||||||||||| | ||||||  |||||||  || |||  |||||||||||||||||||||||  |  ||||||||||||||||    
T  8795345 cggttacacttttcccgatttcgtaaccgcgggacccacatgtgccattacaacggctctgcattcacccacctctataaatag 8795262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 6109473 - 6109583
Alignment:
Q  80 gttacactttccacgatttgctaaccgccagagccaggtgtgccatta---caacggctctgcagccctccacctctataaatagaggactcacggcagt 176  Q
    |||||||||||||||||||  |||||||||||  || |||||| ||||   |||||| ||||||  |  ||||||||||| | || ||||||   |||||    
T  6109473 gttacactttccacgatttcgtaaccgccagacacatgtgtgctattactgcaacggttctgcattcacccacctctatataaaggggactcctcgcagt 6109572  T
Q  177 ccccaaggtag 187  Q
    |||||||||||    
T  6109573 ccccaaggtag 6109583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 1520 - 1724
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| ||||  |||| ||||| |||||||||||||||||| ||||||||||||||  ||||||||  |||| || |||||||||    
T  1520 agagactggttcaaacgaaccacaacatctctctacacgttcccgcaataaactctctggcggttacacttctcacgattttataactgctagagccagg 1619  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||| | |||||  |||||||||||||||| |||||||||| ||||||||||||||| ||    
T  1620 tgtgccattacaacagctctacagccgtccacctctataaatagggcactcaaagcagtccccaaggtagaatctatctcttcctctaaaccctcactct 1719  T
Q  218 ctctg 222  Q
    |||||    
T  1720 ctctg 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 19442109 - 19442313
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||| ||||| |||| ||||| ||||| |||||| ||||||||||| ||||||||| |||| || ||||||  |||||||||||| |||     
T  19442109 agagactggttcaatcgaaccacaacgtctctctacacgttcccacaataaactctctggcggttatacttcccccgatttcgtaaccgccagagtcaga 19442208  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||||||||| ||    
T  19442209 tgtgtcattacaacggctttgcagcactccacctctataaataggggactcacagcagtccccaaggtagaatctatctcttcctctaaaccctcactct 19442308  T
Q  218 ctctg 222  Q
    |||||    
T  19442309 ctctg 19442313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 19967417 - 19967621
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| ||||| || || |||||||||||||||||| ||||||||||||   |||||||||  |||||||||||||||||    
T  19967417 agagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacaccacccacgatttcgtaaccgccagagccagg 19967516  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    |||| ||||||||||| | |||| |||||||||||||||||||| |||||||  |||||||| ||||||| ||| |||||| ||||||||||||||| ||    
T  19967517 tgtgtcattacaacggttatgcaaccctccacctctataaataggggactcaaagcagtccctaaggtagaatccatctcttcctctaaaccctcactct 19967616  T
Q  218 ctctg 222  Q
    |||||    
T  19967617 ctctg 19967621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 9859171 - 9858973
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    |||||| |||||||||||| |||| ||||| || || ||||||||||||||||||||||||||||||||| |||||||||  |||||| |||||||| ||    
T  9859171 gagactcgttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctttggcggttacacttcccacgatttcgtaaccgtcagagccaagt 9859072  T
Q  119 gtg----ccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctca 213  Q
    |||    | |  ||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||| || ||||||| | ||||||||||||    
T  9859071 gtgtgtgcaaccacaacggctctgcagccctccacctctataaataggggactcatagcagtccccaaggtagaatatatctcttcatctaaaccctca 9858973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 38621997 - 38621812
Alignment:
Q  25 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 124  Q
    |||| |||||||| |||| ||||| || || |||||||||||||| | |||||| |||||||||||||||||||  ||||| |||||||||  |||||||    
T  38621997 ggttaaaacgaaccacaacgtctctctgcacgttcccgcaataaattgtttggcagttacactttccacgatttcgtaaccaccagagccaaatgtgcca 38621898  T
Q  125 ttacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccc 210  Q
    |||||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||| ||||  |||| |||||||||||    
T  38621897 ttacaacggctctgcagccctccacctctatatataagggactcactgcagtccccaaggtagaatctcactcttcctctaaaccc 38621812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 8990805 - 8990961
Alignment:
Q  63 caataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataga 162  Q
    ||||||||||| || | ||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||     
T  8990805 caataaactctctgacagttacacttcccacgatttcgtaaccgctagagccaggtgtgccattacaacggctctacagccctccacctctgtaaatagg 8990904  T
Q  163 ggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    |||||||| |||||||||| ||||| ||||| |||| ||||||||||||||| ||||    
T  8990905 ggactcactgcagtccccacggtagaatctaactcttcctctaaaccctcactctct 8990961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 212
Target Start/End: Original strand, 8995475 - 8995630
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    |||||||||||||||||| |||||||||||||| |||||||||  ||||||| ||||| ||||||| || | ||||||||||||||||||||||||||||    
T  8995475 gttcccgcaataaactctatggcggttacacttcccacgatttcgtaaccgctagagctaggtgtgtcaat-caacggctctgcagccctccacctctat 8995573  T
Q  156 aaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctc 212  Q
    |||||| |||||||| ||| |||||||||||| ||||| |||| |||||||||||||    
T  8995574 aaataggggactcactgcattccccaaggtagaatctaactcttcctctaaaccctc 8995630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 56 - 192
Target Start/End: Original strand, 21817775 - 21817911
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    |||||||||||||||||   ||| ||||||||| |||||||||  |||||| |||||  ||||||||||||||||||||||||| ||| ||||||| |||    
T  21817775 gttcccgcaataaactcacaggctgttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcggccatccacctttat 21817874  T
Q  156 aaatagaggactcacggcagtccccaaggtaggatct 192  Q
    |||||| |||||||  |||||||||||||||| ||||    
T  21817875 aaataggggactcaatgcagtccccaaggtagaatct 21817911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 24973924 - 24974085
Alignment:
Q  57 ttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctata 156  Q
    ||||| ||||||||||   ||||||||||||| |||||||||  |||||| |||||  |||||||||||||||||||||||||||||||| | |||||||    
T  24973924 ttcccacaataaactcacaggcggttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctctaactctata 24974023  T
Q  157 aatagaggactcacggcagtccccaaggtaggatctatctctccctct-aaaccctcacgctct 219  Q
    ||||| |||||||  |||||| ||||||||| |||  ||||| ||||| |||||||||| ||||    
T  24974024 aataggggactcaatgcagtcaccaaggtagaatc--tctcttcctctaaaaccctcactctct 24974085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 22186045 - 22186159
Alignment:
Q  78 cggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtc 177  Q
    ||||||||||| |||||||||  |||||| | |||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |  ||||||    
T  22186045 cggttacacttcccacgattttgtaaccgtccgagtaaggtgtgccattacaacggctctgcagccatccacctctataaataggggacttaaagcagtc 22186144  T
Q  178 cccaaggtaggatct 192  Q
    |||||||||| ||||    
T  22186145 cccaaggtagaatct 22186159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 115 - 192
Target Start/End: Original strand, 21815619 - 21815696
Alignment:
Q  115 aggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||  |||||| ||||||||| ||||    
T  21815619 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatct 21815696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 1810 - 1613
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaa-ctctttggcggttacactttccacgatttgctaaccgccagagccag 116  Q
    ||||| |||||||||||||| |||| ||||| || || |||||||||||||| |||| |||||||||||||| |||||||||  |||||||||||||||     
T  1810 agagattggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaaactctctggcggttacacttcccacgatttcgtaaccgccagagccaa 1711  T
Q  117 gtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    || |||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||||||||| |||| |||||||||| |||||||||||||||    
T  1710 gtatgccattacaacggctctgcagccatccacctctataaataggggactcacaacagtccccaatgtagaatctatctcttcctctaaaccctcac 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 67 - 219
Target Start/End: Complemental strand, 15517 - 15365
Alignment:
Q  67 aaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggac 166  Q
    ||||||| |||||||||||||| |||||||||  |||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  15517 aaactctctggcggttacacttcccacgatttagtaaccgccagagtcaggcatgccattgcaacggctctgcagccctccacctctataaataggggac 15418  T
Q  167 tcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    |||   ||||||||  ||||| |||||||||| ||||||||||||||| ||||    
T  15417 tcataacagtccccgcggtagaatctatctcttcctctaaaccctcactctct 15365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 1040 - 1235
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||||| |||| || || || |||||||| |||||||||||| |||||||||||||| |||||||||  ||| ||| ||||||||||    
T  1040 gagactggttcaaacgaaccacaacgtttctctgcatgttcctgcaataaactctatggcggttacacttcccacgatttcgtaatcgctagagccaggt 1139  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    || |||||||||||||| || |||||||||||||||||||||| |||||||| |||||| |||| |||| |||||||||| |||||||||||||||    
T  1140 gttccattacaacggctatgtagccctccacctctataaataggggactcacagcagtctccaacgtagaatctatctcttcctctaaaccctcac 1235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 10 - 219
Target Start/End: Complemental strand, 75054 - 74845
Alignment:
Q  10 ggagcagcagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgcca 109  Q
    |||||| | ||||||||||||||||| | |||| || || |  || |||||||||||||||||| |||||||||||||| | |||||||  |||| ||||    
T  75054 ggagcaaccgagactggttcaaacgagccacaacgtgtctccgcacgttcccgcaataaactctctggcggttacacttccgacgatttcataactgcca 74955  T
Q  110 gagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaacc 209  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||| |||||||||| |||||| |||    
T  74954 gagccaggtgtgccattacaacggctctacagccctccacctctataaataggggactcaccgcattccccaaggtagaatctatctcttcctctatacc 74855  T
Q  210 ctcacgctct 219  Q
     |||| ||||    
T  74854 atcactctct 74845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 68882 - 68689
Alignment:
Q  10 ggagcagcagagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgcca 109  Q
    |||||| | |||||| |||||||||| | |||| |||||    || |||||||||||||||||| | |||||||||||| |||||||||  |||||||||    
T  68882 ggagcaaccgagactagttcaaacgagccacaacgtctcttcccacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccgcca 68783  T
Q  110 gagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctc 203  Q
     ||| ||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||||| |||||| ||| ||||    
T  68782 aagcaaggtgtgtcattacaacggctttgcagccctccacctctataaataggggactcaccgcagtgcccaaggtagaatctatatcttcctc 68689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 30056 - 30252
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| ||||| ||||| |||||||||||||| ||| ||| |||||||||| |||| ||||  ||||| |||||||||||    
T  30056 agagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaaatctctggaggttacacttcccacaatttcgtaaccaccagagccagg 30155  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    ||| || |||||| |||||||||||||||||||||||||||||  |||||||| |||||||| ||||||| |||||||||| |||||||| ||||||    
T  30156 tgttccgttacaatggctctgcagccctccacctctataaatacgggactcacagcagtccctaaggtagaatctatctcttcctctaaatcctcac 30252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 16315 - 16516
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||||| ||||  |||| || || |||||||||||||||||| ||| |||||||||| |||||||||  ||||||||||||||||||    
T  16315 gagactggttcaaacgaaccacaacatctctctgcacgttcccgcaataaactctctggtggttacacttcccacgattttgtaaccgccagagccaggt 16414  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagt-ccccaaggtaggatctatctctccctctaaaccctcacgct 217  Q
    || ||||||||| |||||||||||||||||||||||||||||| |||||||  ||||| ||||||||||| || ||||||| ||| ||||| ||||| ||    
T  16415 gtaccattacaatggctctgcagccctccacctctataaataggggactcaaagcagtcccccaaggtagaatttatctcttcctttaaactctcactct 16514  T
Q  218 ct 219  Q
    ||    
T  16515 ct 16516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 1e-52; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 22915252 - 22915052
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    |||||| |||||||||||  |||| ||||| || || |||||||||||||||||| | || ||||||||| |||||||||  |||||||| |||||| ||    
T  22915252 gagactagttcaaacgaatcacaacgtctctcttcacgttcccgcaataaactctctagctgttacacttcccacgatttcataaccgccggagccaagt 22915153  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctc 218  Q
    || ||||||||||||||||||||| |||||||| ||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||||||| |||    
T  22915152 gtaccattacaacggctctgcagctctccacctttataaataggggactcatagcagtccccaaggtagaatctatctcttcctctaaaccctcactctc 22915053  T
Q  219 t 219  Q
    |    
T  22915052 t 22915052  T

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Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 212
Target Start/End: Original strand, 16853014 - 16853201
Alignment:
Q  25 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 124  Q
    ||||||||| | | |||| ||||| || || ||| |||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  16853014 ggttcaaacaagccacaacgtctctctgcacgttaccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcca 16853113  T
Q  125 ttacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctc 212  Q
    |||||||   | ||||||||||||||||||||||||| |||||||  ||||||||||||| || |||| |   |||||||||||||||    
T  16853114 ttacaacatatttgcagccctccacctctataaataggggactcaatgcagtccccaagggagaatcttttcttccctctaaaccctc 16853201  T

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Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 19790476 - 19790346
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    |||||||||||||||||||| |||| ||||| || || |||||| ||||||||||| || ||||||||||| |||||||||  |||||| ||||| ||||    
T  19790476 agagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctgacggttacacttcccacgatttcgtaaccgtcagagtcagg 19790377  T
Q  118 tgtgccattacaacggctctgcagccctcca 148  Q
    |||||||||||||||||||||||||||||||    
T  19790376 tgtgccattacaacggctctgcagccctcca 19790346  T

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Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 16914846 - 16914706
Alignment:
Q  79 ggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtcc 178  Q
    |||||||| | |||||||||  ||||||||||| | |  ||||||||||||| ||||||||||||||||||||||||| ||||||| |||    ||||||    
T  16914846 ggttacacctcccacgatttcgtaaccgccagaccgatctgtgccattacaatggctctgcagccctccacctctatatatagagggctcttaacagtcc 16914747  T
Q  179 ccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    |||| | || |||||||||| |||| |||||||||| ||||    
T  16914746 ccaaagcagaatctatctcttcctcaaaaccctcactctct 16914706  T

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Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 1998087 - 1998003
Alignment:
Q  138 gcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctctctg 222  Q
    ||||| |||||||||||||||||| | |||||  |||||||||||||||| |||| |||||  |||||||||||||| |||||||    
T  1998087 gcagctctccacctctataaatagggtactcaaagcagtccccaaggtagaatctgtctctgtctctaaaccctcactctctctg 1998003  T

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Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 19773462 - 19773386
Alignment:
Q  144 ctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctc-tccctctaaaccctcacgctct 219  Q
    ||||||||||||||||||  ||||||| |||||||||||||||| ||||||||| ||| ||||||||||||| ||||    
T  19773462 ctccacctctataaataggagactcacagcagtccccaaggtagaatctatctcttccttctaaaccctcactctct 19773386  T

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Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 213
Target Start/End: Original strand, 3559119 - 3559311
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||| |||||||||||||| |||  ||||    |||||||||||||    |||||||| ||||||||||||||||||||  |||| ||  || | |  |    
T  3559119 gagaccggttcaaacgaactgcaacatctcttcgcatgttcccgcaaatctctctttggaggttacactttccacgatttcgtaactgcaggaac-acat 3559217  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctca 213  Q
    |  ||||||||||||||||||||||  ||| ||||||| |||| ||||||    |||| |||||||||| ||||| |||||||||||||||||||    
T  3559218 gaaccattacaacggctctgcagccacccatctctatatataggggactcttaacagttcccaaggtagaatcta-ctctccctctaaaccctca 3559311  T

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Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 22006590 - 22006498
Alignment:
Q  121 gccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    |||||||||||| ||||||||||||||||||||||| |||  ||||||   |||||||||||||||| |||| |||  |||||| |||||||||    
T  22006590 gccattacaacgactctgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatct-tcttcccctcttaaccctcac 22006498  T

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Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 22014107 - 22014015
Alignment:
Q  121 gccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcac 214  Q
    |||||||||||| ||||||||||||||||||||||| |||  ||||||   |||||||||||||||| |||| |||  |||||| |||||||||    
T  22014107 gccattacaacgactctgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatct-tcttcccctcttaaccctcac 22014015  T

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Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 44635947 - 44635823
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    |||||| ||||||||||||||||| |||||    || |||||||| |    |||| |||||||||||||| |||||||||  |||||| | ||  || ||    
T  44635947 gagactagttcaaacgaactacaacgtctcttcgcacgttcccgcgaatctctctctggcggttacacttcccacgatttcgtaaccgacggactcacgt 44635848  T
Q  119 gtgccattacaacggctctgcagcc 143  Q
    |||||||||||||||||||||||||    
T  44635847 gtgccattacaacggctctgcagcc 44635823  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 36639696 - 36639652
Alignment:
Q  117 gtgtgccattacaacggctctgcagccctccacctctataaatag 161  Q
    ||||||||||||||||||||||||  |  ||||||||||||||||    
T  36639696 gtgtgccattacaacggctctgcattcacccacctctataaatag 36639652  T

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Target: scaffold0008 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 242872 - 242673
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 119  Q
    |||| ||||||||||||| |||| |||||  | || ||||||||||||||||||||||| ||||||||| ||||||||   ||||||| |||||||||||    
T  242872 agaccggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctttggcagttacacttcccacgattacgtaaccgcaagagccaggtg 242773  T
Q  120 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    |||||||||||||||||||| |||||||||||||||| |||||| ||||||  ||||||||| | ||| ||||| |||| |||||||| |||||| ||||    
T  242772 tgccattacaacggctctgccgccctccacctctatatatagagtactcacttcagtccccaggatagaatctaactcttcctctaaatcctcactctct 242673  T

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Target: scaffold0008; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 253512 - 253313
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 119  Q
    |||| |||||||| |||| ||||  |||| || || |||||||||||||||||| |||| ||||||||| |||||||||  |||||||||||||||||||    
T  253512 agaccggttcaaatgaaccacaacatctctctgcacgttcccgcaataaactctctggcagttacacttcccacgatttcgtaaccgccagagccaggtg 253413  T
Q  120 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    ||||||||||||| || ||||||| ||||||| |||| |||| ||||||||  ||||||||||||||| ||||| |||| |||||||||| |||| ||||    
T  253412 tgccattacaacgactttgcagccgtccacctttatatataggggactcactacagtccccaaggtagaatctaactcttcctctaaaccgtcactctct 253313  T

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Target: scaffold0083 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 25 - 219
Target Start/End: Original strand, 4202 - 4396
Alignment:
Q  25 ggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgcca 124  Q
    ||||||||||||| |||| ||||  || || |||| ||||||||||||| | || ||||||| | |||||||||  ||||| ||||||||||||||||||    
T  4202 ggttcaaacgaaccacaacgtctatctgcacgttctcgcaataaactctctcgcagttacacatcccacgatttcgtaaccaccagagccaggtgtgcca 4301  T
Q  125 ttacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
     |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||  || |||||||||| ||||||||||||||| ||||    
T  4302 ctacaacggctctgcagccctccacctctataaataggggactcacatcagtccccaagagagaatctatctcttcctctaaaccctcactctct 4396  T

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Target: scaffold0026 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 27 - 219
Target Start/End: Original strand, 151299 - 151490
Alignment:
Q  27 ttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccatt 126  Q
    ||||||||||| |||| ||||| ||  | ||||| |||||||||||| ||||| || ||||| |||||||||  ||||||| |||||||||| | ||| |    
T  151299 ttcaaacgaaccacaacgtctctctgtacgttcctgcaataaactctctggcgttt-cacttcccacgatttcgtaaccgctagagccaggtcttccact 151397  T
Q  127 acaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||| |||||||||| ||| ||||||||||| ||||    
T  151398 acaacggctctgcagccctccacctctataaataggggactcacagcattccctaaggtagaatctatctcttcctttaaaccctcactctct 151490  T

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Target: scaffold0013 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 219
Target Start/End: Original strand, 37234 - 37425
Alignment:
Q  27 ttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccatt 126  Q
    ||||||| |||  ||| ||||| || |||||||| ||||||| |||| || ||||||||||| |||||||||  |||||||||||||| || |||||||     
T  37234 ttcaaacaaaccgcaacgtctctctgcatgttcctgcaataatctctctg-cggttacacttcccacgatttcataaccgccagagcctggcgtgccatc 37332  T
Q  127 acaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    |||||||||||||||||||||||||||||| |||| ||||||  |||||||| |||| ||| ||| |||||||||||| ||||||||| ||||    
T  37333 acaacggctctgcagccctccacctctatatataggggactcgtggcagtccgcaagatagaatcaatctctccctcttaaccctcactctct 37425  T

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Target: scaffold0299 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 101 - 222
Target Start/End: Complemental strand, 19268 - 19147
Alignment:
Q  101 taaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctcc 200  Q
    ||||| ||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| |    
T  19268 taaccaccagagctaggtgtgccgttacaatggctctgcagccctccacctctataaataggggactcactgcagtccccaaggtagaatctatctcttc 19169  T
Q  201 ctctaaaccctcacgctctctg 222  Q
    ||||||| |||||| |||||||    
T  19168 ctctaaatcctcactctctctg 19147  T

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Target: scaffold0192 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 12486 - 12323
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    ||||||||||||| |||| | |||||||||||| ||| |||||  |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  12486 gttcccgcaataatctctctagcggttacacttcccatgattttgtaaccgccagagcctggtgtgccattacaacggctctgcagcccttcacctctat 12387  T
Q  156 aaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    | |||| |||||||   ||  ||||||||||  ||||| || | ||||||||||||||| ||||    
T  12386 atataggggactcataacaaaccccaaggtataatctaactattcctctaaaccctcactctct 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 2831 - 3029
Alignment:
Q  20 agactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtg 119  Q
    |||| ||||||||||||  |||||||||| || || ||||| | ||||| |||| | |||||||||||| |||||||||  |||||||||||||| ||||    
T  2831 agaccggttcaaacgaaacacaatgtctctctgcacgttccagtaataatctctctagcggttacacttcccacgatttcgtaaccgccagagcctggtg 2930  T
Q  120 tgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    |||||||||||| |||||||||| ||||||||||||| |||| |||||||   ||||||| ||||||| ||||| ||||  ||| || ||||||| ||||    
T  2931 tgccattacaacagctctgcagctctccacctctatatatag-ggactcataacagtcccgaaggtagaatctaactctttctcgaagccctcactctct 3029  T

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Target: scaffold0084 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 54603 - 54770
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggt 118  Q
    ||||||||||||||||||   ||| ||||| || || |||||||||||||||||   || |||||||||| ||| |||||  |||||| |||||  ||||    
T  54603 gagactggttcaaacgaaacccaacgtctctctccacgttcccgcaataaactcacaggtggttacacttcccatgatttcgtaaccgtcagagtaaggt 54702  T
Q  119 gtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggta 186  Q
    || |||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||| ||||||    
T  54703 gtaccattacaacggctatgcagccctccacctctataaataggggactcaatgcagtcccaaaggta 54770  T

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Target: scaffold0362 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 7349 - 7522
Alignment:
Q  18 agagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccagg 117  Q
    ||||||||||||||||||||  ||| |||||  | || |||||||||||||||||   ||| ||||||||| | |||||||  |||| | |||||  |||    
T  7349 agagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacacttccaacgatttcgtaac-gtcagagtaagg 7447  T
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||| |||||||||||| ||||    
T  7448 tgtgccattacaacggctttgcagccctccacctctataaataggggactcaatgcaatccccaaggtagaatct 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 56 - 192
Target Start/End: Complemental strand, 15034 - 14898
Alignment:
Q  56 gttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctat 155  Q
    |||||||||||||||||   ||| ||||||||| |||||||||  |||||| |||||  ||||||||||||||||||||||||| ||| ||||||| |||    
T  15034 gttcccgcaataaactcacaggctgttacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcggccatccacctttat 14935  T
Q  156 aaatagaggactcacggcagtccccaaggtaggatct 192  Q
    |||||| |||||||  |||||||||||||||| ||||    
T  14934 aaataggggactcaatgcagtccccaaggtagaatct 14898  T

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Target: scaffold0265; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 17190 - 17113
Alignment:
Q  115 aggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatct 192  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||  |||||| ||||||||| ||||    
T  17190 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatct 17113  T

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Target: scaffold0096 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 10906 - 11037
Alignment:
Q  53 catgttcccgcaataaactctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctc 152  Q
    ||||||||||||||||||||   ||||||||||||| ||| |||||  |||||| |||||  ||||||||||||||||||||||| |||||||||||||     
T  10906 catgttcccgcaataaactcacaggcggttacacttcccatgatttcgtaaccgtcagagttaggtgtgccattacaacggctctacagccctccacctt 11005  T
Q  153 tataaatagaggactcacggcagtccccaagg 184  Q
    ||||||||| |||||||  | |||||||||||    
T  11006 tataaatagtggactcaatggagtccccaagg 11037  T

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Target: scaffold0025 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 86424 - 86562
Alignment:
Q  81 ttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtcccc 180  Q
    ||||||||||||||||||  ||| ||||||||||  |||||||||||||||| || |||| ||||||||||||||| |||| |||||||  ||||||||     
T  86424 ttacactttccacgatttcgtaatcgccagagcctagtgtgccattacaacgactttgcaaccctccacctctatatataggggactcatagcagtcccg 86523  T
Q  181 aaggtaggatctatctctccctctaaaccctcacgctct 219  Q
    ||| ||| |||||| ||| ||||||||| ||||| ||||    
T  86524 aagatagaatctatttcttcctctaaactctcactctct 86562  T

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Target: scaffold0011 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 20342 - 20452
Alignment:
Q  77 gcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagt 176  Q
    |||||||||||| |||| ||||  |||||||  || ||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||||    ||||    
T  20342 gcggttacacttcccacaattttgtaaccgcttgacccaagtgtaccattacaacggctctgcagccctccacctctaaaaataggggactcttaacagt 20441  T
Q  177 ccccaaggtag 187  Q
    |||||||||||    
T  20442 ccccaaggtag 20452  T

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Target: scaffold0063 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 213
Target Start/End: Original strand, 36830 - 36972
Alignment:
Q  70 ctctttggcggttacactttccacgatttgctaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagaggactca 169  Q
    |||||||| |||||||||| |||| ||||  |||||| | ||  || ||||||||||||||||||||| |||||  ||||||||||| |||| ||||||     
T  36830 ctctttggaggttacacttcccacaatttcgtaaccgtcggacacacgtgtgccattacaacggctctacagccacccacctctatatataggggactct 36929  T
Q  170 cggcagtccccaaggtaggatctatctctccctctaaaccctca 213  Q
       ||||| | ||||||| ||||| |||||||||||||||||||    
T  36930 taacagtctctaaggtagaatcta-ctctccctctaaaccctca 36972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 49325 - 49419
Alignment:
Q  118 tgtgccattacaacggctctgcagccctccacctctataaatagaggactcacggcagtccccaaggtaggatctatctctccctctaaaccctca 213  Q
    ||||||||||||||||||||||| ||  ||||||||||| |||| ||||||    | ||||| ||||||| ||||| |||||||||||||||||||    
T  49325 tgtgccattacaacggctctgcatccacccacctctatatataggggactcttaactgtccctaaggtagaatcta-ctctccctctaaaccctca 49419  T

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Target: scaffold0483 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 9335 - 9243
Alignment:
Q  19 gagactggttcaaacgaactacaatgtctcactacatgttcccgcaataaactctttggcgg-ttacactttccacgatttgctaaccgccag 110  Q
    ||||||||||||||||||| |||| ||||| || || ||||| |||||||||||| | |||| |||||||| |||| ||||  ||||||||||    
T  9335 gagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctagcggtttacacttcccacaatttcgtaaccgccag 9243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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