View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3910_low_9 (Length: 286)

Name: NF3910_low_9
Description: NF3910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3910_low_9
NF3910_low_9
[»] chr4 (42 HSPs)
chr4 (120-276)||(6645269-6645425)
chr4 (3-51)||(36081904-36081952)
chr4 (1-84)||(3968976-3969057)
chr4 (4-51)||(3475962-3476009)
chr4 (1-51)||(8455994-8456044)
chr4 (1-51)||(9032871-9032921)
chr4 (1-51)||(29577366-29577416)
chr4 (1-39)||(38952780-38952818)
chr4 (1-39)||(46309065-46309103)
chr4 (1-51)||(53763741-53763791)
chr4 (1-51)||(53781767-53781817)
chr4 (3-36)||(11493126-11493159)
chr4 (5-70)||(28676067-28676130)
chr4 (1-38)||(38844433-38844470)
chr4 (1-41)||(46355231-46355271)
chr4 (3-38)||(25523139-25523174)
chr4 (1-80)||(48650157-48650236)
chr4 (1-39)||(1562478-1562516)
chr4 (1-39)||(1987655-1987693)
chr4 (1-39)||(4896442-4896480)
chr4 (1-39)||(9162157-9162195)
chr4 (1-39)||(12638915-12638953)
chr4 (1-39)||(16508919-16508957)
chr4 (5-39)||(29384139-29384173)
chr4 (1-39)||(33438136-33438174)
chr4 (1-83)||(33820237-33820316)
chr4 (1-39)||(38160715-38160753)
chr4 (1-31)||(41170863-41170893)
chr4 (1-51)||(45678354-45678404)
chr4 (1-39)||(46567020-46567058)
chr4 (3-44)||(4511907-4511948)
chr4 (1-38)||(22257139-22257176)
chr4 (2-39)||(36122996-36123033)
chr4 (1-34)||(46686324-46686357)
chr4 (1-33)||(6594686-6594718)
chr4 (1-37)||(17363321-17363357)
chr4 (1-45)||(31833158-31833202)
chr4 (1-45)||(32365603-32365647)
chr4 (7-39)||(36444337-36444369)
chr4 (1-37)||(41119470-41119506)
chr4 (3-39)||(41609614-41609650)
chr4 (1-45)||(46480442-46480486)
[»] chr3 (46 HSPs)
chr3 (1-51)||(1834597-1834647)
chr3 (1-51)||(49886754-49886804)
chr3 (1-51)||(7144-7194)
chr3 (1-51)||(1295423-1295473)
chr3 (1-39)||(28300588-28300626)
chr3 (1-51)||(49457656-49457706)
chr3 (1-46)||(8066446-8066491)
chr3 (3-39)||(25806466-25806502)
chr3 (1-39)||(1901868-1901906)
chr3 (1-39)||(1911314-1911352)
chr3 (1-39)||(16295555-16295593)
chr3 (1-51)||(21481855-21481905)
chr3 (1-39)||(25959484-25959522)
chr3 (1-39)||(26668931-26668969)
chr3 (1-51)||(27198084-27198134)
chr3 (1-39)||(31326799-31326837)
chr3 (1-39)||(33007451-33007489)
chr3 (1-39)||(36799489-36799527)
chr3 (1-51)||(36869767-36869817)
chr3 (1-39)||(37215173-37215211)
chr3 (1-39)||(37303474-37303512)
chr3 (1-39)||(39604188-39604226)
chr3 (1-39)||(40785641-40785679)
chr3 (1-51)||(41348923-41348973)
chr3 (1-39)||(41717354-41717392)
chr3 (1-39)||(41877779-41877817)
chr3 (1-51)||(42102328-42102378)
chr3 (1-51)||(43441761-43441811)
chr3 (1-39)||(44593057-44593095)
chr3 (1-39)||(44695102-44695140)
chr3 (1-39)||(46473219-46473257)
chr3 (1-51)||(48117427-48117477)
chr3 (4-38)||(48649675-48649709)
chr3 (1-51)||(50745640-50745690)
chr3 (1-39)||(51385382-51385420)
chr3 (1-39)||(55344238-55344276)
chr3 (1-38)||(41877554-41877591)
chr3 (1-34)||(51410897-51410930)
chr3 (3-39)||(7231948-7231984)
chr3 (3-39)||(18169250-18169286)
chr3 (1-45)||(25559795-25559839)
chr3 (1-37)||(26279975-26280011)
chr3 (1-37)||(35368702-35368738)
chr3 (1-37)||(43894929-43894965)
chr3 (1-37)||(47484370-47484406)
chr3 (3-39)||(50025627-50025663)
[»] chr7 (30 HSPs)
chr7 (1-78)||(39533289-39533365)
chr7 (3-59)||(7295560-7295616)
chr7 (1-52)||(46148257-46148308)
chr7 (1-39)||(11070319-11070357)
chr7 (1-51)||(44185267-44185317)
chr7 (1-51)||(44187782-44187832)
chr7 (1-45)||(2323384-2323428)
chr7 (4-39)||(41077446-41077481)
chr7 (1-39)||(4678154-4678192)
chr7 (1-39)||(5978670-5978708)
chr7 (1-39)||(18157127-18157165)
chr7 (1-39)||(21839075-21839113)
chr7 (1-51)||(22331141-22331191)
chr7 (1-51)||(23034243-23034293)
chr7 (1-39)||(25940609-25940647)
chr7 (1-39)||(27688728-27688766)
chr7 (1-51)||(30864347-30864397)
chr7 (1-51)||(37385163-37385213)
chr7 (1-51)||(37392134-37392184)
chr7 (1-39)||(37970024-37970062)
chr7 (1-39)||(40693470-40693508)
chr7 (1-39)||(42640934-42640972)
chr7 (1-39)||(46651763-46651801)
chr7 (1-38)||(5378718-5378755)
chr7 (1-38)||(28110046-28110083)
chr7 (1-38)||(31982148-31982185)
chr7 (2-39)||(37856123-37856160)
chr7 (7-80)||(42118598-42118671)
chr7 (1-57)||(29923762-29923818)
chr7 (3-39)||(30941270-30941306)
[»] chr1 (52 HSPs)
chr1 (1-84)||(39815437-39815529)
chr1 (1-84)||(35030659-35030742)
chr1 (1-58)||(36794706-36794763)
chr1 (1-51)||(4604620-4604670)
chr1 (1-51)||(25995551-25995601)
chr1 (1-51)||(43640917-43640967)
chr1 (1-51)||(44161716-44161766)
chr1 (1-51)||(47059820-47059870)
chr1 (1-51)||(50527987-50528037)
chr1 (7-51)||(3919395-3919439)
chr1 (4-51)||(26547328-26547375)
chr1 (1-60)||(44730735-44730793)
chr1 (1-59)||(578895-578953)
chr1 (2-36)||(5574220-5574254)
chr1 (1-51)||(7203774-7203824)
chr1 (1-51)||(8577432-8577482)
chr1 (1-39)||(10385505-10385543)
chr1 (1-39)||(16658530-16658568)
chr1 (1-39)||(16987538-16987576)
chr1 (1-39)||(17167940-17167978)
chr1 (1-39)||(18959094-18959132)
chr1 (1-51)||(25061824-25061874)
chr1 (1-39)||(25098730-25098768)
chr1 (1-39)||(25302587-25302625)
chr1 (1-39)||(27352721-27352759)
chr1 (1-51)||(28457277-28457327)
chr1 (1-39)||(30530516-30530554)
chr1 (1-39)||(31290150-31290188)
chr1 (1-51)||(32966358-32966408)
chr1 (1-51)||(37947150-37947200)
chr1 (1-39)||(39010905-39010943)
chr1 (1-39)||(40595996-40596034)
chr1 (1-39)||(43612024-43612062)
chr1 (1-39)||(46903561-46903599)
chr1 (1-39)||(47279749-47279787)
chr1 (1-39)||(48872470-48872508)
chr1 (1-39)||(50017365-50017403)
chr1 (1-51)||(50035468-50035518)
chr1 (1-39)||(51339642-51339680)
chr1 (1-34)||(19427601-19427634)
chr1 (1-38)||(28253106-28253143)
chr1 (1-38)||(36690515-36690552)
chr1 (1-38)||(36706616-36706653)
chr1 (5-70)||(36930669-36930732)
chr1 (1-38)||(40610320-40610357)
chr1 (6-51)||(49615205-49615250)
chr1 (1-38)||(50659135-50659172)
chr1 (1-37)||(366748-366784)
chr1 (3-51)||(644789-644837)
chr1 (5-49)||(4618739-4618783)
chr1 (3-39)||(44714334-44714370)
chr1 (5-80)||(48689649-48689725)
[»] chr5 (36 HSPs)
chr5 (1-88)||(20040877-20040963)
chr5 (5-81)||(3770925-3771000)
chr5 (3-81)||(5043018-5043096)
chr5 (1-37)||(35595930-35595966)
chr5 (5-39)||(125187-125221)
chr5 (1-39)||(4434562-4434600)
chr5 (1-39)||(5005204-5005242)
chr5 (1-51)||(5698258-5698308)
chr5 (1-39)||(6865729-6865767)
chr5 (1-51)||(8959251-8959301)
chr5 (1-39)||(9636100-9636138)
chr5 (1-51)||(11464053-11464103)
chr5 (1-39)||(11666270-11666308)
chr5 (1-39)||(13734302-13734340)
chr5 (1-39)||(19376074-19376112)
chr5 (1-39)||(19437348-19437386)
chr5 (5-75)||(22653734-22653804)
chr5 (1-51)||(26626749-26626799)
chr5 (1-39)||(28811519-28811557)
chr5 (1-39)||(28904083-28904121)
chr5 (1-39)||(28940478-28940516)
chr5 (1-39)||(29765922-29765960)
chr5 (1-51)||(31626006-31626056)
chr5 (1-39)||(34381103-34381141)
chr5 (1-51)||(35616731-35616781)
chr5 (1-39)||(39595365-39595403)
chr5 (1-39)||(40566159-40566197)
chr5 (1-51)||(41460207-41460257)
chr5 (3-52)||(1108091-1108140)
chr5 (2-39)||(2117582-2117619)
chr5 (2-39)||(33567181-33567218)
chr5 (1-38)||(42909810-42909847)
chr5 (3-39)||(8087892-8087928)
chr5 (1-33)||(9714084-9714116)
chr5 (1-37)||(12878826-12878862)
chr5 (1-49)||(23991322-23991370)
[»] chr8 (41 HSPs)
chr8 (1-51)||(1422632-1422682)
chr8 (1-60)||(44380536-44380594)
chr8 (1-39)||(295637-295675)
chr8 (1-51)||(23709067-23709117)
chr8 (1-39)||(32725724-32725762)
chr8 (1-51)||(34247865-34247915)
chr8 (1-51)||(34765780-34765830)
chr8 (1-51)||(35967336-35967386)
chr8 (2-39)||(895999-896036)
chr8 (1-37)||(35633913-35633949)
chr8 (1-52)||(36497752-36497803)
chr8 (1-39)||(426192-426230)
chr8 (1-39)||(1796574-1796612)
chr8 (1-59)||(8233418-8233476)
chr8 (1-51)||(9305927-9305977)
chr8 (1-39)||(9985620-9985658)
chr8 (1-39)||(21273652-21273690)
chr8 (1-39)||(22767221-22767259)
chr8 (5-39)||(24503012-24503046)
chr8 (1-51)||(32234382-32234432)
chr8 (1-35)||(33415657-33415691)
chr8 (1-39)||(37524370-37524408)
chr8 (1-51)||(41776266-41776316)
chr8 (2-39)||(154382-154419)
chr8 (1-58)||(1646347-1646404)
chr8 (1-50)||(9000945-9000994)
chr8 (47-84)||(20996184-20996221)
chr8 (6-39)||(27631043-27631076)
chr8 (1-38)||(28927772-28927809)
chr8 (1-38)||(34474040-34474077)
chr8 (1-38)||(41344612-41344649)
chr8 (2-51)||(45405765-45405814)
chr8 (1-37)||(6243125-6243161)
chr8 (1-37)||(22836083-22836119)
chr8 (3-31)||(24616438-24616466)
chr8 (2-82)||(30462637-30462717)
chr8 (1-45)||(36015648-36015692)
chr8 (1-33)||(37033049-37033081)
chr8 (1-37)||(37471734-37471770)
chr8 (3-51)||(42651013-42651061)
chr8 (1-37)||(43590785-43590821)
[»] chr2 (32 HSPs)
chr2 (1-51)||(4114362-4114412)
chr2 (3-39)||(1151622-1151658)
chr2 (1-51)||(694360-694410)
chr2 (1-39)||(4842461-4842499)
chr2 (1-39)||(42081128-42081166)
chr2 (1-38)||(7086067-7086104)
chr2 (1-38)||(23344932-23344969)
chr2 (1-39)||(4263806-4263844)
chr2 (1-39)||(4858204-4858242)
chr2 (1-39)||(5167684-5167722)
chr2 (1-51)||(11828750-11828800)
chr2 (1-39)||(13104570-13104608)
chr2 (1-51)||(14954529-14954579)
chr2 (1-39)||(16051330-16051368)
chr2 (1-39)||(18508169-18508207)
chr2 (1-51)||(21805716-21805766)
chr2 (1-51)||(22296059-22296109)
chr2 (1-39)||(25801753-25801791)
chr2 (1-51)||(30856898-30856948)
chr2 (1-39)||(32750089-32750127)
chr2 (1-51)||(36763450-36763500)
chr2 (1-39)||(43936402-43936440)
chr2 (1-38)||(2013228-2013265)
chr2 (1-42)||(12208533-12208574)
chr2 (1-38)||(22390243-22390280)
chr2 (1-45)||(19523337-19523381)
chr2 (3-51)||(27307175-27307223)
chr2 (7-47)||(32755775-32755815)
chr2 (1-37)||(35705861-35705897)
chr2 (3-39)||(36376793-36376829)
chr2 (1-37)||(42665756-42665792)
chr2 (3-39)||(43791733-43791769)
[»] chr6 (19 HSPs)
chr6 (1-39)||(32457194-32457232)
chr6 (3-51)||(7304035-7304083)
chr6 (1-51)||(608591-608641)
chr6 (1-39)||(3339441-3339479)
chr6 (1-59)||(10557500-10557558)
chr6 (1-39)||(11742926-11742964)
chr6 (1-39)||(12044421-12044459)
chr6 (1-51)||(16743196-16743246)
chr6 (5-39)||(23633267-23633301)
chr6 (1-39)||(32729980-32730018)
chr6 (1-39)||(32853086-32853124)
chr6 (1-38)||(16337013-16337050)
chr6 (1-38)||(34021115-34021152)
chr6 (1-37)||(2165244-2165280)
chr6 (1-37)||(2176877-2176913)
chr6 (1-89)||(25554336-25554423)
chr6 (3-51)||(27334957-27335005)
chr6 (3-51)||(27395697-27395745)
chr6 (1-37)||(32135381-32135417)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-32)||(9797-9828)
[»] scaffold0592 (1 HSPs)
scaffold0592 (1-39)||(1001-1039)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-39)||(15130-15168)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-51)||(3034-3084)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-39)||(124248-124286)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-51)||(88899-88949)
scaffold0003 (1-39)||(337209-337247)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-35)||(395952-395986)
[»] scaffold0501 (1 HSPs)
scaffold0501 (1-38)||(10459-10496)
[»] scaffold0076 (1 HSPs)
scaffold0076 (2-39)||(11284-11321)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-37)||(17129-17165)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-49)||(17262-17310)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-84)||(31499-31580)


Alignment Details
Target: chr4 (Bit Score: 153; Significance: 4e-81; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 120 - 276
Target Start/End: Complemental strand, 6645425 - 6645269
Alignment:
Q  120 gaggataaataaattaataaattatgggtcataatatcataaattgatttacctattgccagtggcggcttaatttgcttgttcgtgttaactgttaagt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6645425 gaggataaataaattaataaattatgggtcataatatcataaattgatttacctattgccagtggcggcttaatttgcttgttcgtgttaactgttaagt 6645326  T
Q  220 ctttgaagatagctttacaagccaccaaaaaacctttggttcatgctgatacctatg 276  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6645325 cattgaagatagctttacaagccaccaaaaaacctttggttcatgctgatacctatg 6645269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 36081904 - 36081952
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  36081904 tctctctctattgtttttgaccaatgagagaagagaataataaggttgt 36081952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3968976 - 3969057
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattactcttt 84  Q
    |||||||||||||| |||||||||||| ||| ||||||| | ||| ||||| ||||||  ||||| ||||||||| ||||||||    
T  3968976 tttctctctctattatttttgaccaatcaaagaagagaaaattaaagttgtccaaaaa--attgttcaaatatcaatactcttt 3969057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 3475962 - 3476009
Alignment:
Q  4 ctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||    
T  3475962 ctctctctattgtttttgaccaatgaaaagaaagaaaaataaggttgt 3476009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8455994 - 8456044
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||||||||| |||| |||||| || ||||||||    
T  8455994 tttctctctctattgtttttgaccaataaaaagagagaaaaagaaggttgt 8456044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9032871 - 9032921
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| ||||||||||| || ||||||||    
T  9032871 tttctctctccattgtttttgaccaataaaaaaagagaaaaacaaggttgt 9032921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29577416 - 29577366
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||||| || ||||||||    
T  29577416 tttctctctccattgtttttgaccaatgaaaagagagaacaacaaggttgt 29577366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38952780 - 38952818
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  38952780 tttctctctccattgtttttgaccaatgaaaaaagagaa 38952818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 46309103 - 46309065
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  46309103 tttctctctctattgtttttgaccaatgaaaagagagaa 46309065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 53763791 - 53763741
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||  ||||||||||||| |||| ||||||||||||||||    
T  53763791 tttctctctctatttattttgaccaatgagaaaaaagaataataaggttgt 53763741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 53781817 - 53781767
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||| |||| ||||||||    
T  53781817 tttctctctccattgtttttgaccaatgaaaagagagcataacaaggttgt 53781767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 11493159 - 11493126
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaaga 36  Q
    ||||||||||||||||||||||||||||||||||    
T  11493159 tctctctctattgtttttgaccaatgaaaaaaga 11493126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 28676130 - 28676067
Alignment:
Q  5 tctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaa 70  Q
    |||||| ||||||||||||||||||||| |||||| || ||||||| ||||||||| |||||||||    
T  28676130 tctctccattgtttttgaccaatgaaaagagagaaaaagaaggttg-tcaaaaagg-ttgtacaaa 28676067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38844470 - 38844433
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  38844470 tttctctctctattgtttttgaccaatgaaaagagaga 38844433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46355271 - 46355231
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaata 41  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  46355271 tttctctctctattgttattgaccaatgagaaaagagaata 46355231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 25523174 - 25523139
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||||||||||||||||||||||| |||||    
T  25523174 tctctctctattgtttttgaccaatgaaaagagaga 25523139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 48650236 - 48650157
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattact 80  Q
    |||||||||| |||||||||||||||| | || |||||| || |||||||| | ||||   |||| ||||||||||||||    
T  48650236 tttctctctccattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaatagttgttcaaatatcattact 48650157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1562516 - 1562478
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  1562516 tttctctctctattatttttgaccaatcaaaaaagagaa 1562478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1987693 - 1987655
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  1987693 tttctctctccattgtttttgaccaatgaaaagagagaa 1987655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4896480 - 4896442
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  4896480 tttctctctccattgtttttgaccaatgaaaagagagaa 4896442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9162157 - 9162195
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  9162157 tttctctctccattgtttttgaccaatgaaaagagagaa 9162195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12638915 - 12638953
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  12638915 tttctctctccattgtttttgaccaatgaaaagagagaa 12638953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16508957 - 16508919
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  16508957 tttctctctctattatttttgaccaatgaaaagagagaa 16508919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 29384173 - 29384139
Alignment:
Q  5 tctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||| ||||||||||||||||||||||||||||    
T  29384173 tctctccattgtttttgaccaatgaaaaaagagaa 29384139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33438136 - 33438174
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  33438136 tttctctctctattgtttttgaccaataaaaagagagaa 33438174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 33820316 - 33820237
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattactctt 83  Q
    |||||||||||||| ||||| |||||| |||| |||||| ||||| ||||| || ||||| |||||||||||||| |||||||    
T  33820316 tttctctctctattattttt-accaatcaaaagagagaaaaataaagttgt-cataaagg-ttgtacaaatatcactactctt 33820237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38160753 - 38160715
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  38160753 tttctctctccattgtttttgactaatgaaaaaagagaa 38160715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 41170863 - 41170893
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  41170863 tttctctctctattgtttttgaccaatgaaa 41170893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45678354 - 45678404
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| |||| |||||| || ||||||||    
T  45678354 tttctctctccattgtttttgaccaataaaaagagagaacaacaaggttgt 45678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46567020 - 46567058
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  46567020 tttctctctccattgtttttgaccaatgaaaagagagaa 46567058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 4511907 - 4511948
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataata 44  Q
    ||||| |||||||||||||| ||||||||||||| |||||||    
T  4511907 tctctttctattgtttttgatcaatgaaaaaagaaaataata 4511948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22257176 - 22257139
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  22257176 tttctctctctattgtttttaaccaatgaaaagagaga 22257139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 36123033 - 36122996
Alignment:
Q  2 ttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  36123033 ttctctctctattgtttttgaccaatcaaaatagagaa 36122996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 46686324 - 46686357
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaa 34  Q
    |||||||||| |||||||||||||||||||||||    
T  46686324 tttctctctccattgtttttgaccaatgaaaaaa 46686357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6594718 - 6594686
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaa 33  Q
    |||||||||| ||||||||||||||||||||||    
T  6594718 tttctctctccattgtttttgaccaatgaaaaa 6594686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17363321 - 17363357
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  17363321 tttctctctctattgttttggaccaatgaaaagagag 17363357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31833202 - 31833158
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataa 45  Q
    ||||| ||||||||||||||||||||| |||||||| || |||||    
T  31833202 tttctttctctattgtttttgaccaataaaaaaagaaaaaaataa 31833158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32365647 - 32365603
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataa 45  Q
    |||||||||| |||||||||||||||| |||| |||||| |||||    
T  32365647 tttctctctccattgtttttgaccaataaaaagagagaaaaataa 32365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 36444369 - 36444337
Alignment:
Q  7 tctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||| ||||||||||||||||||||||||||||    
T  36444369 tctccattgtttttgaccaatgaaaaaagagaa 36444337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 41119506 - 41119470
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  41119506 tttctctctccattgtttttgaccaatgaaaagagag 41119470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 41609650 - 41609614
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  41609650 tctctctctattgtttttgaccaattaaaagagagaa 41609614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46480486 - 46480442
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataa 45  Q
    |||| ||||| |||||||||||||||| ||||||||||| |||||    
T  46480486 tttccctctccattgtttttgaccaataaaaaaagagaaaaataa 46480442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1834597 - 1834647
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  1834597 tttctctctctattgtttttgaccaatgaaagaagagaataataagattgt 1834647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49886754 - 49886804
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  49886754 tttctctctctattgtttttaaccaataaaaaaagagaataataaggttgt 49886804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7194 - 7144
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| ||||||||||| || ||||||||    
T  7194 tttctctctccattgtttttgaccaataaaaaaagagaaaaagaaggttgt 7144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1295423 - 1295473
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||||||||||||||||||||||||| | |||| || ||||||||    
T  1295423 tttctctctctattgtttttgaccaatgaaaagatagaaaaagaaggttgt 1295473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28300626 - 28300588
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  28300626 tttctctctctattgtttttgaccaatgaaaagagagaa 28300588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49457656 - 49457706
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||||| ||| |||||||    
T  49457656 tttctctctccattgtttttgaccaatgaaaagagagaaaaatgaggttgt 49457706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8066446 - 8066491
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataag 46  Q
    |||||||||| ||||||||||||||||||||| |||||| ||||||    
T  8066446 tttctctctccattgtttttgaccaatgaaaagagagaaaaataag 8066491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 25806502 - 25806466
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||| |||||||||||    
T  25806502 tctctctctattgtttttgaccaataaaaaaagagaa 25806466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1901906 - 1901868
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  1901906 tttctctctccattgtttttgaccaatgaaaagagagaa 1901868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1911352 - 1911314
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  1911352 tttctctctccattgtttttgaccaatgaaaagagagaa 1911314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16295555 - 16295593
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  16295555 tttctctctctattgtttttgaccaataaaaagagagaa 16295593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21481855 - 21481905
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||| ||||||||||||||||||||||| || |||||| ||| |||||||    
T  21481855 tttctgtctctattgtttttgaccaatgagaagagagaacaatgaggttgt 21481905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25959522 - 25959484
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  25959522 tttctctctccattgtttttgaccaatgaaaagagagaa 25959484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26668931 - 26668969
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  26668931 tttctctctctattgttttggaccaatgaaaaatgagaa 26668969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27198134 - 27198084
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||| ||||||||||| |||||| ||| |||||||    
T  27198134 tttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgt 27198084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31326799 - 31326837
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  31326799 tttctctctccattgtttttgaccaatgaaaagagagaa 31326837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33007451 - 33007489
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  33007451 tttctctctccattgtttttgaccaatgaaaagagagaa 33007489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36799489 - 36799527
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  36799489 tttctctctccattgtttttgaccaatgaaaagagagaa 36799527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36869817 - 36869767
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||||  ||| |||||||    
T  36869817 tttctctctccattgtttttgaccaatgaaaagagagagaaatgaggttgt 36869767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37215211 - 37215173
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  37215211 tttctctctccattgtttttgaccaatgaaaagagagaa 37215173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37303474 - 37303512
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  37303474 tttctctctctattgtttttgatcaatgaaaagagagaa 37303512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39604226 - 39604188
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  39604226 tttctctctccattgtttttgaccaatgaaaagagagaa 39604188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40785679 - 40785641
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  40785679 tttctctctccattgtttttgaccaatgaaaatagagaa 40785641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41348973 - 41348923
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||  ||||||||||| |||| ||||||||||| |||||||||||    
T  41348973 tttctctctgcattgtttttgatcaataaaaaaagagaaaaataaggttgt 41348923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41717354 - 41717392
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  41717354 tttctctctccattgtttttgaccaatgaaaagagagaa 41717392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41877779 - 41877817
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  41877779 tttctctctccattgtttttgaccaatcaaaaaagagaa 41877817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42102328 - 42102378
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| |||||| |||| ||| |||||||    
T  42102328 tttctctctccattgtttttgaccaataaaaaaaaagaaaaatgaggttgt 42102378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43441761 - 43441811
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||| |||||||||||| ||||||||||| | |||||||||    
T  43441761 tttctctctccattatttttgaccaataaaaaaagagaaaagtaaggttgt 43441811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44593057 - 44593095
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  44593057 tttctctctccattgtttttgaccaatgaaaatagagaa 44593095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44695102 - 44695140
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  44695102 tttctctctccattgtttttaaccaatgaaaaaagagaa 44695140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46473219 - 46473257
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  46473219 tttctctctccattgtttttgaccaatgaaaagagagaa 46473257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48117427 - 48117477
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||| | || ||||||||    
T  48117427 tttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgt 48117477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 48649675 - 48649709
Alignment:
Q  4 ctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    ||||||| |||||||||||||||||||||||||||    
T  48649675 ctctctccattgtttttgaccaatgaaaaaagaga 48649709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50745640 - 50745690
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||| | || ||||||||    
T  50745640 tttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgt 50745690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51385420 - 51385382
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  51385420 tttctctctccattgtttttgaccaatgaaaagagagaa 51385382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 55344276 - 55344238
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  55344276 tttctctctctattgtttttaaccaatgaaaagagagaa 55344238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41877591 - 41877554
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  41877591 tttctctctccattgtttttgaccaatgaaaagagaga 41877554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 51410897 - 51410930
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaa 34  Q
    |||||||||| |||||||||||||||||||||||    
T  51410897 tttctctctccattgtttttgaccaatgaaaaaa 51410930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 7231984 - 7231948
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  7231984 tctctctccattgtttttgaccaatgaaaagagagaa 7231948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 18169250 - 18169286
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||| |||||||||||||||| |||||||||||    
T  18169250 tctctctccattgtttttgaccaataaaaaaagagaa 18169286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25559795 - 25559839
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataa 45  Q
    |||||||||||||||||||||| |||||| || |||||| |||||    
T  25559795 tttctctctctattgtttttgatcaatgagaagagagaacaataa 25559839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26279975 - 26280011
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  26279975 tttctctctccattgtttttgaccaatgaaaagagag 26280011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35368702 - 35368738
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  35368702 tttctctctctattgttttttaccaatgaaaagagag 35368738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43894965 - 43894929
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  43894965 tttctctatctattgtttttgaccaatgaaaagagag 43894929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 47484370 - 47484406
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  47484370 tttctctctccattgtttttgaccaatgaaaagagag 47484406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 50025663 - 50025627
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||| || ||||||    
T  50025663 tctctctctattgtttttgaccaatgagaagagagaa 50025627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39533365 - 39533289
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcatta 78  Q
    ||||| ||||||||||||||||||||||| |||||||||||| || |||||   |||||| |||||||||||||||||    
T  39533365 tttctatctctattgtttttgaccaatga-aaaagagaataacaatgttgtctcaaaagggttgtacaaatatcatta 39533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 7295560 - 7295616
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaag 59  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||||| |||||    
T  7295560 tctctctctattgtttttgaccaatgagaagagagaataacaaggttgttccaaaag 7295616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 46148257 - 46148308
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgtt 52  Q
    |||||||||| ||||||||||||||||||||| |||||  ||||||||||||    
T  46148257 tttctctctccattgtttttgaccaatgaaaagagagagaaataaggttgtt 46148308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11070319 - 11070357
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  11070319 tttctctctctattgtttttgaccaatgaaaagagagaa 11070357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44185267 - 44185317
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||||||||||| || |||||| ||| |||||||    
T  44185267 tttctctctctattgtttttgaccaatgagaagagagaacaatgaggttgt 44185317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44187782 - 44187832
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||| |||||    
T  44187782 tttctctctccattgtttttgaccaatgaaaaaaaagaacaataaagttgt 44187832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2323384 - 2323428
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataa 45  Q
    |||||||||||||||||||||||||||||||| | |||| |||||    
T  2323384 tttctctctctattgtttttgaccaatgaaaagaaagaaaaataa 2323428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 41077481 - 41077446
Alignment:
Q  4 ctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||||| ||||||    
T  41077481 ctctctctattgtttttgaccaatgaaaagagagaa 41077446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4678154 - 4678192
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  4678154 tttctctctccattgtttttgaccaatgaaaatagagaa 4678192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5978670 - 5978708
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  5978670 tttctctctccattgtttttgaccaatgaaaagagagaa 5978708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18157165 - 18157127
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  18157165 tttctctctccattgtttttgaccaatgaaaagagagaa 18157127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21839113 - 21839075
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  21839113 tttctctctccattgtttttaaccaatgaaaaaagagaa 21839075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22331191 - 22331141
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||| ||||||||||| |||| |||| ||||||||    
T  22331191 tttctctctccattgttttttaccaatgaaaagagagcataacaaggttgt 22331141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23034293 - 23034243
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||||||||| | ||||||| | || ||||||||    
T  23034293 tttctctctctattgtttttgaccaataagaaaagagcacaacaaggttgt 23034243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25940647 - 25940609
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  25940647 tttctctctcaattgtttttgaccaatgaaaagagagaa 25940609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27688728 - 27688766
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  27688728 tttctctctccattgtttttgaccaatgaaaagagagaa 27688766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30864397 - 30864347
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| | ||||||||| || ||||||||    
T  30864397 tttctctctccattgtttttgaccaataagaaaagagaaaaacaaggttgt 30864347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37385213 - 37385163
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| | ||||||||| || ||||||||    
T  37385213 tttctctctcaattgtttttgaccaataagaaaagagaagaacaaggttgt 37385163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37392134 - 37392184
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||| ||||||||||| |||||| ||| |||||||    
T  37392134 tttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgt 37392184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37970024 - 37970062
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  37970024 tttctctctctattgtttttgaccaatgagaagagagaa 37970062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40693508 - 40693470
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  40693508 tttctctctctattgtttttgaccaatgagaagagagaa 40693470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42640934 - 42640972
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  42640934 tttctctctctattatttttgaccaatcaaaaaagagaa 42640972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46651763 - 46651801
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  46651763 tttctctctccattgtttttgaccaatgaaaagagagaa 46651801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5378718 - 5378755
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  5378718 tttctctctccattgtttttgaccaatgaaaagagaga 5378755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28110046 - 28110083
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  28110046 tttctctctccattgtttttgaccaatgaaaagagaga 28110083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31982148 - 31982185
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  31982148 tttctctctccattgtttttgaccaatgaaaagagaga 31982185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 37856160 - 37856123
Alignment:
Q  2 ttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  37856160 ttctctctccattgtttttgaccaatgaaaagagagaa 37856123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 42118671 - 42118598
Alignment:
Q  7 tctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattact 80  Q
    ||||||||||||||||||||| | || |||||| || ||||||||   |||| | |||||||| ||||||||||    
T  42118671 tctctattgtttttgaccaataagaagagagaagaagaaggttgtcacaaaatggttgtacaattatcattact 42118598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29923762 - 29923818
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaa 57  Q
    ||||||||||||||||||||||||||| | ||||||  | || |||||||| |||||    
T  29923762 tttctctctctattgtttttgaccaataagaaaagaacacaacaaggttgtccaaaa 29923818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 30941270 - 30941306
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  30941270 tctctctccattgtttttaaccaatgaaaaaagagaa 30941306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 39815437 - 39815529
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataag---------gttgttcaaaaaggattgtacaaatatcattactcttt 84  Q
    |||||||||||||| |||||||||||||| | ||||||||||||||         |||||| ||||||| |||||||||||||||||||||||    
T  39815437 tttctctctctattttttttgaccaatgagagaagagaataataagatcccaaaagttgtttaaaaagggttgtacaaatatcattactcttt 39815529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 35030742 - 35030659
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattactcttt 84  Q
    |||| ||||| |||||||||||||||| ||||||||||| || |||||||| | ||||   |||| ||||||||||||||||||    
T  35030742 tttcactctccattgtttttgaccaataaaaaaagagaacaacaaggttgtaccaaaatagttgttcaaatatcattactcttt 35030659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36794706 - 36794763
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaa 58  Q
    |||||||||||||||||||||||||| ||||| ||||||||| || ||||||| ||||    
T  36794706 tttctctctctattgtttttgaccaacgaaaagagagaataacaaagttgttccaaaa 36794763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4604620 - 4604670
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||||| || ||||||||    
T  4604620 tttctctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgt 4604670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25995551 - 25995601
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| |||| |||||| |||||||||||    
T  25995551 tttctctctccattgtttttgaccaataaaaagagagaaaaataaggttgt 25995601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43640967 - 43640917
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||||| ||| |||||||    
T  43640967 tttctctctccattgtttttgaccaatgaaaagagagaaaaatgaggttgt 43640917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44161766 - 44161716
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||||||||| |||| ||||||||| ||| ||||    
T  44161766 tttctctctctattgtttttgaccaattaaaatagagaataacaagattgt 44161716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47059870 - 47059820
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||||| |||||| ||||    
T  47059870 tttctctctccattgtttttgaccaatgaaaagagagaaaaataagattgt 47059820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50528037 - 50527987
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||||| || ||||||||    
T  50528037 tttctctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgt 50527987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 3919395 - 3919439
Alignment:
Q  7 tctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||    
T  3919395 tctctattgtttttgaccaatgagagaagagaataataaagttgt 3919439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 26547328 - 26547375
Alignment:
Q  4 ctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||| |||||||||||||||| ||||||||||  |||||||||||    
T  26547328 ctctctccattgtttttgaccaattaaaaaagagagaaataaggttgt 26547375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 44730735 - 44730793
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaagg 60  Q
    ||||||||||  |||||||| |||||||||||||||||| || ||||||| |||||||||    
T  44730735 tttctctctcctttgtttttaaccaatgaaaaaagagaaaaagaaggttg-tcaaaaagg 44730793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 578895 - 578953
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaag 59  Q
    ||||||||||||||||||||||||||| |||| ||| ||||| || ||| ||| |||||    
T  578895 tttctctctctattgtttttgaccaataaaaagagataataaaaaagttattccaaaag 578953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 5574254 - 5574220
Alignment:
Q  2 ttctctctctattgtttttgaccaatgaaaaaaga 36  Q
    |||||||||||||||||||||||||| ||||||||    
T  5574254 ttctctctctattgtttttgaccaataaaaaaaga 5574220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7203824 - 7203774
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||||||||||||||||||||  ||| |||||| || ||||||||    
T  7203824 tttctctctctattgtttttgaccaatagaaagagagaaaaacaaggttgt 7203774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8577482 - 8577432
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||||| || |||||| || ||||||||    
T  8577482 tttctctctccattgtttttgaccaatgagaatagagaacaacaaggttgt 8577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10385505 - 10385543
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  10385505 tttctctctccattgtttttgaccaatcaaaaaagagaa 10385543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16658530 - 16658568
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  16658530 tttctctctccattgtttttgaccaataaaaaaagagaa 16658568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16987538 - 16987576
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  16987538 tttctctctccattgtttttgaccaatgaaaagagagaa 16987576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17167940 - 17167978
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  17167940 tttctctctctattgttttttaccaatgaaaagagagaa 17167978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18959094 - 18959132
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  18959094 tttctctctccattgtttttgaccaatgaaaagagagaa 18959132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25061824 - 25061874
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||| ||||||||||| |||||| || ||||||||    
T  25061824 tttctctctccattgtttttaaccaatgaaaagagagaaaaagaaggttgt 25061874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25098768 - 25098730
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  25098768 tttctctctccattgtttttgaccaatgaaaagagagaa 25098730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25302625 - 25302587
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  25302625 tttctctctctattgtttttaaccaatgaaaagagagaa 25302587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27352721 - 27352759
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  27352721 tttctctctccattgtttttgaccaatgaaaagagagaa 27352759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28457327 - 28457277
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||  ||||||||||||||||||||| |||||| ||||| |||||    
T  28457327 tttctctcttcattgtttttgaccaatgaaaatagagaacaataaagttgt 28457277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30530554 - 30530516
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  30530554 tttctctctccattgtttttgaccaatgaaaagagagaa 30530516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31290188 - 31290150
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  31290188 tttctctctccattgtttttaaccaatgaaaaaagagaa 31290150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32966358 - 32966408
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| |||| |||||| ||| |||||||    
T  32966358 tttctctctccattgtttttgaccaataaaaagagagaaaaatgaggttgt 32966408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37947200 - 37947150
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||||| || |||||| || ||||||||    
T  37947200 tttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgt 37947150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39010905 - 39010943
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  39010905 tttctctctccattgtttttgaccaatgaaaagagagaa 39010943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40596034 - 40595996
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  40596034 tttctctctccattgtttttgaccaatgaaaagagagaa 40595996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43612062 - 43612024
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  43612062 tttctctctccattgtttttgaccaatgaaaagagagaa 43612024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46903561 - 46903599
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  46903561 tttctctctctattgtttttgaccaatgagaagagagaa 46903599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47279749 - 47279787
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  47279749 tttctctctctattgttatagaccaatgaaaaaagagaa 47279787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 48872470 - 48872508
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  48872470 tttctctctccattgtttttgaccaatgaaaagagagaa 48872508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 50017403 - 50017365
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  50017403 tttctctctctattgttttggaccaatgaaaagagagaa 50017365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50035518 - 50035468
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||||||| |||||||||||| | ||||||||| ||||| |||||    
T  50035518 tttctctctctattctttttgaccaataacaaaagagaaaaataaagttgt 50035468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51339680 - 51339642
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  51339680 tttctctctccattgtttttgaccaatgaaaagagagaa 51339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 19427601 - 19427634
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaa 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  19427601 tttctctctcttttgtttttgaccaatgaaaaaa 19427634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28253106 - 28253143
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  28253106 tttctctctccattgtttttgaccaatgaaaagagaga 28253143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36690552 - 36690515
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  36690552 tttctctctccattgtttttgaccaatgaaaatagaga 36690515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36706653 - 36706616
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  36706653 tttctctctccattgtttttgaccaatgaaaatagaga 36706616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 36930732 - 36930669
Alignment:
Q  5 tctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaa 70  Q
    |||||| |||||||||||||||| |||| |||||| || ||||||| ||||||||| |||||||||    
T  36930732 tctctccattgtttttgaccaataaaaagagagaaaaagaaggttg-tcaaaaagg-ttgtacaaa 36930669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40610320 - 40610357
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  40610320 tttctctctccattgtttttgaccaatgaaaagagaga 40610357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 49615250 - 49615205
Alignment:
Q  6 ctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||| |||||||||||||| ||||||||| ||||| |||||    
T  49615250 ctctctattatttttgaccaatgagaaaagagaacaataaagttgt 49615205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 50659172 - 50659135
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  50659172 tttctctctccattgtttttgaccaatgaaaagagaga 50659135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 366748 - 366784
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  366748 tttctctctccattgtttttgaccaatgaaaagagag 366784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 644789 - 644837
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||| ||||| || |||||| ||||| |||||    
T  644789 tctctctctattgtttttgactaatgagaagagagaacaataaagttgt 644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 4618739 - 4618783
Alignment:
Q  5 tctctctattgtttttgaccaatgaaaaaagagaataataaggtt 49  Q
    |||||| ||| |||||||||||||||||||||||| || ||||||    
T  4618739 tctctccattatttttgaccaatgaaaaaagagaacaacaaggtt 4618783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 44714334 - 44714370
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  44714334 tctctctctattgtttttgaccaataaaaagagagaa 44714370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 48689649 - 48689725
Alignment:
Q  5 tctctctattg-tttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattact 80  Q
    ||||||||||| ||||||| ||||||||| |||||| || |||||||| | |||||  |||| ||||||||| ||||    
T  48689649 tctctctattgttttttgatcaatgaaaagagagaacaacaaggttgtcccaaaagagttgttcaaatatcactact 48689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20040877 - 20040963
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattactctttattt 88  Q
    |||||||||| |||||||||||||||||| || |||||| || |||||||| | ||| || |||| ||||||||||| ||||||||||    
T  20040877 tttctctctccattgtttttgaccaatgagaagagagaagaagaaggttgtaccaaatgg-ttgttcaaatatcattgctctttattt 20040963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 3771000 - 3770925
Alignment:
Q  5 tctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattactc 81  Q
    ||||||||||||||||||||||| |||| |||||| || |||| ||| ||||| || |||||||||||||| |||||    
T  3771000 tctctctattgtttttgaccaataaaaagagagaaaaagaaggctgtccaaaatgg-ttgtacaaatatcactactc 3770925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 5043018 - 5043096
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattactc 81  Q
    ||||||||| ||||||||||||||||| || |||||| || |||||||| | ||||| || || ||||||||| |||||    
T  5043018 tctctctctgttgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagtatagttcaaatatcactactc 5043096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35595966 - 35595930
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  35595966 tttctctctccattgtttttgaccaatgaaaaaagag 35595930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 125187 - 125221
Alignment:
Q  5 tctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||||| ||||||    
T  125187 tctctctattgtttttgaccaatgaaaagagagaa 125221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4434562 - 4434600
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  4434562 tttctctctccattgtttttaaccaatgaaaaaagagaa 4434600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5005204 - 5005242
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  5005204 tttctctctctattgtttttgaccaatgataagagagaa 5005242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5698308 - 5698258
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| | ||||||||| || ||||||||    
T  5698308 tttctctctccattgtttttgaccaataacaaaagagaaaaagaaggttgt 5698258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6865767 - 6865729
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  6865767 tttctctctccattgtttttgaccaatgaaaagagagaa 6865729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8959251 - 8959301
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| |||| |||||| || ||||||||    
T  8959251 tttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgt 8959301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9636138 - 9636100
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  9636138 tttctctctccattgtttttgaccaatgaaaagagagaa 9636100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11464103 - 11464053
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| |||| |||||| || ||||||||    
T  11464103 tttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgt 11464053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11666270 - 11666308
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  11666270 tttctctctccattgtttttgaccaatgaaaagagagaa 11666308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13734340 - 13734302
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  13734340 tttctctctccattgtttttgaccaatgaaaagagagaa 13734302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19376112 - 19376074
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  19376112 tttctctctccattgtttttgaccaatgaaaagagagaa 19376074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19437348 - 19437386
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  19437348 tttctctctctattgtttttgaccaatcaaaagagagaa 19437386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 22653734 - 22653804
Alignment:
Q  5 tctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatca 75  Q
    |||||||||| |||||||||||||| || |||||| |||||| |||| | |||||  |||| |||||||||    
T  22653734 tctctctattatttttgaccaatgagaagagagaacaataagattgtcccaaaagagttgttcaaatatca 22653804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26626799 - 26626749
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| | ||||||||| || ||||||||    
T  26626799 tttctctctccattgtttttgaccaataacaaaagagaaaaaaaaggttgt 26626749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28811519 - 28811557
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  28811519 tttctctctccattgtttttgaccaatgaaaagagagaa 28811557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28904083 - 28904121
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  28904083 tttctctctccattgtttttgaccaataaaaaaagagaa 28904121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28940478 - 28940516
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  28940478 tttctctctccattgtttttgaccaataaaaaaagagaa 28940516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29765922 - 29765960
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  29765922 tttctctctccattgtttttgaccaatgaataaagagaa 29765960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31626056 - 31626006
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||||||| |||||||||||||| || |||||| ||||| |||||    
T  31626056 tttctctctctattttttttgaccaatgagaagagagaacaataaagttgt 31626006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34381103 - 34381141
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  34381103 tttctctctccattgtttttgaccaatgaaaagagagaa 34381141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35616781 - 35616731
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||||||||| | || |||||| || ||||||||    
T  35616781 tttctctctctattgtttttgaccaataagaagagagaacaacaaggttgt 35616731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39595365 - 39595403
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  39595365 tttctctctccattgtttttgaccaatgaaaagagagaa 39595403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40566197 - 40566159
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  40566197 tttctctctccattgtttttgaccaatgaaaagagagaa 40566159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41460207 - 41460257
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||| ||||||||||| |||||| ||| |||||||    
T  41460207 tttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgt 41460257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 1108091 - 1108140
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataataaggttgtt 52  Q
    ||||||||||||||||||||||||||| || |||||| || || ||||||    
T  1108091 tctctctctattgtttttgaccaatgagaagagagaacaacaaagttgtt 1108140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 2117619 - 2117582
Alignment:
Q  2 ttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  2117619 ttctctctccattgtttttaaccaatgaaaaaagagaa 2117582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 33567218 - 33567181
Alignment:
Q  2 ttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  33567218 ttctctctccattgtttttgaccaatgaaaagagagaa 33567181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42909810 - 42909847
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  42909810 tttctctctccattgtttttgaccaatgaaaagagaga 42909847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 8087892 - 8087928
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  8087892 tctctctccattgtttttgaccaatgaaaagagagaa 8087928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 9714116 - 9714084
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaa 33  Q
    |||||||||| ||||||||||||||||||||||    
T  9714116 tttctctctccattgtttttgaccaatgaaaaa 9714084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12878826 - 12878862
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||||||| |||| |||||||||||||||||    
T  12878826 tttctctctctattattttggaccaatgaaaaaagag 12878862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23991322 - 23991370
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggtt 49  Q
    ||||| |||| ||||||||||||||||||||| |||||| ||| |||||    
T  23991322 tttctttctcaattgtttttgaccaatgaaaagagagaaaaatgaggtt 23991370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1422682 - 1422632
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  1422682 tttctctctccattgtttttgaccaatgaaaaaatagaataacaaggttgt 1422632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 44380594 - 44380536
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaagg 60  Q
    ||||||||||||||||||||||||||| ||||||||||| |  ||||||| |||||||||    
T  44380594 tttctctctctattgtttttgaccaatcaaaaaagagaaaagaaaggttg-tcaaaaagg 44380536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 295637 - 295675
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  295637 tttctctctctattgtttttgaccaatgaaaatagagaa 295675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23709067 - 23709117
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||    
T  23709067 tttctctctctattgttcttgaccaatgaaaagagagcataacaaggttgt 23709117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32725762 - 32725724
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  32725762 tttctctctctattgtttttgaccaatgaaaagagagaa 32725724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34247865 - 34247915
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||| |||||||||||||||||||||||| |||||| || ||||||||    
T  34247865 tttctctttctattgtttttgaccaatgaaaagagagaacaacaaggttgt 34247915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34765830 - 34765780
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| ||||||||||| | |||||||||    
T  34765830 tttctctctccattgtttttgaccaataaaaaaagagaaaagtaaggttgt 34765780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35967386 - 35967336
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| ||||| ||||| |||||||||||    
T  35967386 tttctctctccattgtttttgaccaataaaaaatgagaaaaataaggttgt 35967336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 895999 - 896036
Alignment:
Q  2 ttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  895999 ttctctctctattgtttttgaccaatgaaaagagagaa 896036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35633949 - 35633913
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  35633949 tttctctctccattgtttttgaccaatgaaaaaagag 35633913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 36497752 - 36497803
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgtt 52  Q
    |||||||||||||||||||| |||||| |||| |||||| || |||||||||    
T  36497752 tttctctctctattgtttttaaccaataaaaagagagaaaaacaaggttgtt 36497803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 426192 - 426230
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  426192 tttctctctccattgtttttgaccaatgaaaagagagaa 426230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1796574 - 1796612
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  1796574 tttctctctccattgtttttgaccaatgaaaagagagaa 1796612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8233476 - 8233418
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaag 59  Q
    |||||||||| |||||||||||||||||| || |||||| || |||||| | |||||||    
T  8233476 tttctctctccattgtttttgaccaatgagaagagagaacaacaaggttatccaaaaag 8233418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9305977 - 9305927
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||| |||||||||||| ||||||||| ||||||||  ||||||||    
T  9305977 tttctctctatattgtttttgatcaatgaaaagagagaatatcaaggttgt 9305927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9985658 - 9985620
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  9985658 tttctctctctattgtttttgaccaataagaaaagagaa 9985620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21273690 - 21273652
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  21273690 tttctctctctattgtttttaaccaatgaaaagagagaa 21273652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22767221 - 22767259
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  22767221 tttctctctccattgtttttgaccaatgaaaagagagaa 22767259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 24503012 - 24503046
Alignment:
Q  5 tctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||||| ||||||    
T  24503012 tctctctattgtttttgaccaatgaaaagagagaa 24503046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32234432 - 32234382
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||| ||||||| ||||||||||| || ||||||||| ||||||||    
T  32234432 tttctctctatattgttattgaccaatgagaagagagaataaaaaggttgt 32234382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 33415691 - 33415657
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaag 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  33415691 tttctctctctattgtttttgaccaataaaaaaag 33415657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37524408 - 37524370
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  37524408 tttctctctccattgtttttgaccaatgaaaagagagaa 37524370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41776266 - 41776316
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||| | || ||||||||    
T  41776266 tttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgt 41776316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 154382 - 154419
Alignment:
Q  2 ttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  154382 ttctctctctattgtttttgaccaataaaaagagagaa 154419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1646347 - 1646404
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaa 58  Q
    |||||||||| |||||||| |||||||||||| |||| | |||||| |||||| ||||    
T  1646347 tttctctctccattgttttagaccaatgaaaagagagcacaataagattgttccaaaa 1646404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9000994 - 9000945
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttg 50  Q
    |||||||||| ||||||||||||||||||||| |||| | ||| ||||||    
T  9000994 tttctctctccattgtttttgaccaatgaaaagagagtaaaatgaggttg 9000945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 20996184 - 20996221
Alignment:
Q  47 gttgttcaaaaaggattgtacaaatatcattactcttt 84  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  20996184 gttgttcaaaaatgattgtacaaatatcatttctcttt 20996221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 27631043 - 27631076
Alignment:
Q  6 ctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||| ||||||    
T  27631043 ctctctattgtttttgaccaatgaaaagagagaa 27631076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28927772 - 28927809
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  28927772 tttctctctccattgtttttgaccaatgaaaagagaga 28927809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34474040 - 34474077
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  34474040 tttctctctccattgtttttaaccaatgaaaaaagaga 34474077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41344649 - 41344612
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  41344649 tttctctctccattgtttttgaccaatgaaaagagaga 41344612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 45405814 - 45405765
Alignment:
Q  2 ttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||| ||||||||||||||||||| || |||||| ||||| |||||    
T  45405814 ttctctctttattgtttttgaccaatgagaagagagaacaataaagttgt 45405765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6243125 - 6243161
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  6243125 tttctctctccattgtttttgaccaatgaaaagagag 6243161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 22836119 - 22836083
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  22836119 tttctctctccattgtttttgaccaatgaaaagagag 22836083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 24616438 - 24616466
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaa 31  Q
    |||||||||||||||||||||||||||||    
T  24616438 tctctctctattgtttttgaccaatgaaa 24616466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 30462717 - 30462637
Alignment:
Q  2 ttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattactct 82  Q
    |||| |||| |||||||| ||||||| |||| ||| || ||||||||||| | ||||   |||| ||||||||||||||||    
T  30462717 ttctttctccattgttttcgaccaataaaaagagataacaataaggttgtaccaaaatagttgttcaaatatcattactct 30462637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36015648 - 36015692
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataa 45  Q
    ||||||||| ||||||||||||||||| |||| |||||| |||||    
T  36015648 tttctctctttattgtttttgaccaataaaaagagagaaaaataa 36015692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 37033081 - 37033049
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaa 33  Q
    |||||||||| ||||||||||||||||||||||    
T  37033081 tttctctctccattgtttttgaccaatgaaaaa 37033049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 37471734 - 37471770
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  37471734 tttctctctccattgtttttgaccaatgaaaagagag 37471770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 42651013 - 42651061
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||||||||||| |||||||| || |||||| || ||||||||    
T  42651013 tctctctctattgtttttaaccaatgagaagagagaacaacaaggttgt 42651061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43590785 - 43590821
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  43590785 tttctctctccattgtttttgaccaatgaaaagagag 43590821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4114412 - 4114362
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||| |||| || |||||||||||||||||||||||||||||||||    
T  4114412 tttctctctttattattattgaccaatgaaaaaagagaataataaggttgt 4114362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 1151622 - 1151658
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  1151622 tctctctctattgtttttgaccaatgaaaaaagagaa 1151658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 694360 - 694410
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||||||    
T  694360 tttctctctccattgtttttgaccaatgaaaaaagagataaatgaggttgt 694410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4842499 - 4842461
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  4842499 tttctctctccattgtttttgaccaatgaaaaaagagaa 4842461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42081128 - 42081166
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  42081128 tttctctctctattgtttttgaccaatgaaaatagagaa 42081166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7086104 - 7086067
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  7086104 tttctctctctattgtttttgaccaatgaaaagagaga 7086067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23344969 - 23344932
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  23344969 tttctctctctattgtttttgaccaatgaaaagagaga 23344932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4263844 - 4263806
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  4263844 tttctctctccattgtttttgaccaatgagaaaagagaa 4263806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4858204 - 4858242
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||| ||||||||||||||||||||||||| ||||||    
T  4858204 tttctccctctattgtttttgaccaatgaaaagagagaa 4858242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5167722 - 5167684
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  5167722 tttctctctccattgtttttgaccaatgaaaagagagaa 5167684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11828800 - 11828750
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||| | || ||||||||    
T  11828800 tttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttgt 11828750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13104570 - 13104608
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  13104570 tttctctctccattgtttttgaccaatgaaaagagagaa 13104608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14954579 - 14954529
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||| |||||| ||||||||||| || ||||||||    
T  14954579 tttctctctccattgttttttaccaattaaaaaagagaaaaacaaggttgt 14954529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16051368 - 16051330
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  16051368 tttctctctctattatttttgaccaatcaaaaaagagaa 16051330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18508169 - 18508207
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  18508169 tttctctctctattgtttttgaccaataaaaaaggagaa 18508207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21805766 - 21805716
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||| ||||||||||||  || ||||||||| ||||||||    
T  21805766 tttctctctctattgcttttgaccaatgggaagagagaataagaaggttgt 21805716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22296109 - 22296059
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||| ||||| ||||||||||||||||||||| | || ||||||||    
T  22296109 tttctctctatattgattttgaccaatgaaaaaagagcacaacaaggttgt 22296059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25801791 - 25801753
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  25801791 tttctctctccattgtttttgaccaatgaaaagagagaa 25801753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30856898 - 30856948
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||| || ||||||||||||||||||||| |||||| || ||||||||    
T  30856898 tttctctatccattgtttttgaccaatgaaaagagagaaaaagaaggttgt 30856948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32750089 - 32750127
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  32750089 tttctctctccattgtttttgaccaatgaaaagagagaa 32750127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36763500 - 36763450
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||  |||||||||||||||||||| |||||| || ||||||||    
T  36763500 tttctctctccgttgtttttgaccaatgaaaagagagaaaaagaaggttgt 36763450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43936440 - 43936402
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  43936440 tttctctctccattgtttttgaccaataaaaaaagagaa 43936402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2013265 - 2013228
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  2013265 tttctctccctattgtttttgaccaatgaaaagagaga 2013228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12208533 - 12208574
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataa 42  Q
    |||||||||| |||||| |||||||||||||||| |||||||    
T  12208533 tttctctctccattgttattgaccaatgaaaaaaaagaataa 12208574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22390243 - 22390280
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  22390243 tttctctctccattgtttttgaccaatgaaaagagaga 22390280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19523381 - 19523337
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataa 45  Q
    |||||||||| |||||||||||||||| |||| |||||| |||||    
T  19523381 tttctctctccattgtttttgaccaataaaaagagagaacaataa 19523337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 27307223 - 27307175
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||| |||||||||||||||| | || |||||| |||||||||||    
T  27307223 tctctctccattgtttttgaccaataagaagagagaaaaataaggttgt 27307175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 32755775 - 32755815
Alignment:
Q  7 tctctattgtttttgaccaatgaaaaaagagaataataagg 47  Q
    ||||||||||||||||||||| |||| |||||| |||||||    
T  32755775 tctctattgtttttgaccaatcaaaagagagaaaaataagg 32755815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35705897 - 35705861
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  35705897 tttctctctccattgtttttgaccaatgaaaagagag 35705861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 36376829 - 36376793
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  36376829 tctctctccattgtttttgaccaatgaaaagagagaa 36376793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 42665792 - 42665756
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  42665792 tttctttctctattgttttggaccaatgaaaaaagag 42665756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 43791769 - 43791733
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  43791769 tctctctctattgtttttgaccaataaaaagagagaa 43791733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32457232 - 32457194
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  32457232 tttctctctccattgtttttgaccaatgaaaaaagagaa 32457194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 7304083 - 7304035
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    ||||||||||||||||||||||||||| || |||||| ||| |||||||    
T  7304083 tctctctctattgtttttgaccaatgagaagagagaacaatgaggttgt 7304035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 608641 - 608591
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||||| || |||||| || ||||||||    
T  608641 tttctctctccattgtttttgaccaatgagaagagagaacaacaaggttgt 608591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3339479 - 3339441
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  3339479 tttctctctctattgtttttgaccaataaaaagagagaa 3339441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10557500 - 10557558
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaag 59  Q
    |||||||||| ||||||||||||||||||||| |||| | || ||| |||||| |||||    
T  10557500 tttctctctccattgtttttgaccaatgaaaagagagtacaacaagattgttccaaaag 10557558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11742964 - 11742926
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  11742964 tttctctctctattgtttttgaccaatgagaagagagaa 11742926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12044421 - 12044459
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  12044421 tttctctctccattgtttttgaccaatgagaaaagagaa 12044459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16743246 - 16743196
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||||| || |||||| ||| |||||||    
T  16743246 tttctctctcaattgtttttgaccaatgagaagagagaaaaatgaggttgt 16743196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 23633301 - 23633267
Alignment:
Q  5 tctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||||||| |||||||||||||||||||    
T  23633301 tctctctattgttttggaccaatgaaaaaagagaa 23633267  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32729980 - 32730018
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  32729980 tttctctctctattgtttttgatcaatgaaaagagagaa 32730018  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32853124 - 32853086
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  32853124 tttctctctcaattgtttttaaccaatgaaaaaagagaa 32853086  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16337050 - 16337013
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  16337050 tttctctctccattgtttttgaccaatgaaaagagaga 16337013  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34021152 - 34021115
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  34021152 tttccctctctattgtttttgaccaatgaaaagagaga 34021115  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2165280 - 2165244
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  2165280 tttctctctccattgtttttgaccaatgaaaagagag 2165244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2176913 - 2176877
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  2176913 tttctctctccattgtttttgaccaatgaaaagagag 2176877  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25554336 - 25554423
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattactctttatttt 89  Q
    ||||||||||| || ||||||||||||  ||| |||||| ||| | |||| ||||||| | |||| ||||||||| |||||||| ||||    
T  25554336 tttctctctcttttatttttgaccaatagaaagagagaaaaatgaagttg-tcaaaaatggttgttcaaatatcactactctttttttt 25554423  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 27334957 - 27335005
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||||| |||||||||||| |||| |||||| || ||||||||    
T  27334957 tctctctctattatttttgaccaataaaaagagagaaaaacaaggttgt 27335005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 27395697 - 27395745
Alignment:
Q  3 tctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||||| |||||||||||| |||| |||||| || ||||||||    
T  27395697 tctctctctattatttttgaccaataaaaagagagaaaaacaaggttgt 27395745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32135417 - 32135381
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  32135417 tttctctctcaattgtttttgaccaatgaaaagagag 32135381  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 9828 - 9797
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  9828 tttctctctctattgtttttgaccaatgaaaa 9797  T

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Target: scaffold0592 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1001 - 1039
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  1001 tttctctctctgttgtttttgaccaatgaaaagagagaa 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15168 - 15130
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  15168 tttctctctccattgtttttaaccaatgaaaaaagagaa 15130  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3034 - 3084
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| ||||||||||||||||||||| |||| | ||||| |||||    
T  3034 tttctctctccattgtttttgaccaatgaaaagagagcacaataaagttgt 3084  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 124248 - 124286
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  124248 tttctctctccattgtttttgaccaataaaaaaagagaa 124286  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 88899 - 88949
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgt 51  Q
    |||||||||| |||||||||||||||| | |||||| || |||||||||||    
T  88899 tttctctctccattgtttttgaccaataagaaaagaaaaaaataaggttgt 88949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 337209 - 337247
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  337209 tttctctctccattgtttttgaccaataaaaaaagagaa 337247  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 395952 - 395986
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaag 35  Q
    |||||||||||||||||||| ||||||||||||||    
T  395952 tttctctctctattgtttttaaccaatgaaaaaag 395986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 10496 - 10459
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagaga 38  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  10496 tttctctctccattgtttttgaccaatgaaaagagaga 10459  T

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Target: scaffold0076 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 11284 - 11321
Alignment:
Q  2 ttctctctctattgtttttgaccaatgaaaaaagagaa 39  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  11284 ttctctctccattgtttttgaccaatgaaaagagagaa 11321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17129 - 17165
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagag 37  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  17129 tttctctctccattgtttttgaccaatgaaaagagag 17165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17310 - 17262
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggtt 49  Q
    ||||| |||| |||||||||||||||| ||||||||||| || ||||||    
T  17310 tttctatctccattgtttttgaccaataaaaaaagagaaaaagaaggtt 17262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 31580 - 31499
Alignment:
Q  1 tttctctctctattgtttttgaccaatgaaaaaagagaataataaggttgttcaaaaaggattgtacaaatatcattactcttt 84  Q
    |||||||||| ||||||||| ||||||||||| |||||| || || |||||   ||||  ||||| ||||||||| ||||||||    
T  31580 tttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacaaaa--attgttcaaatatcactactcttt 31499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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