View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3913_high_14 (Length: 411)

Name: NF3913_high_14
Description: NF3913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3913_high_14
NF3913_high_14
[»] chr8 (41 HSPs)
chr8 (1-403)||(10014568-10014970)
chr8 (14-193)||(4743563-4743743)
chr8 (14-150)||(42435579-42435715)
chr8 (24-139)||(1746598-1746714)
chr8 (15-149)||(15212448-15212583)
chr8 (14-151)||(30143003-30143140)
chr8 (14-154)||(4731317-4731456)
chr8 (24-139)||(34254708-34254824)
chr8 (24-139)||(34256884-34257000)
chr8 (14-150)||(43036085-43036221)
chr8 (15-149)||(11383451-11383585)
chr8 (20-145)||(22975983-22976108)
chr8 (24-139)||(42497887-42498003)
chr8 (24-99)||(3051534-3051609)
chr8 (171-232)||(10014242-10014303)
chr8 (15-139)||(19945710-19945835)
chr8 (15-140)||(27810970-27811095)
chr8 (234-326)||(34254900-34254993)
chr8 (15-328)||(4733309-4733622)
chr8 (24-139)||(31217929-31218045)
chr8 (23-105)||(4283035-4283117)
chr8 (14-139)||(12703009-12703134)
chr8 (210-295)||(40220186-40220271)
chr8 (50-125)||(10929492-10929567)
chr8 (15-128)||(40221230-40221343)
chr8 (24-105)||(17982359-17982441)
chr8 (20-147)||(1345745-1345873)
chr8 (15-77)||(4696259-4696321)
chr8 (28-105)||(44303560-44303638)
chr8 (14-126)||(19175314-19175427)
chr8 (213-318)||(19492236-19492340)
chr8 (213-275)||(26268766-26268827)
chr8 (14-67)||(5702121-5702174)
chr8 (234-324)||(41365408-41365500)
chr8 (208-278)||(17849500-17849569)
chr8 (24-105)||(19948701-19948783)
chr8 (95-141)||(33351842-33351888)
chr8 (21-67)||(33351895-33351941)
chr8 (14-63)||(23799221-23799270)
chr8 (89-125)||(2627428-2627464)
chr8 (211-275)||(15949132-15949195)
[»] chr4 (55 HSPs)
chr4 (15-194)||(3909715-3909893)
chr4 (24-139)||(52095740-52095856)
chr4 (14-150)||(6655400-6655536)
chr4 (14-139)||(26363720-26363845)
chr4 (239-330)||(54882320-54882411)
chr4 (15-149)||(54882485-54882619)
chr4 (24-121)||(24968801-24968898)
chr4 (14-126)||(36314812-36314924)
chr4 (14-126)||(36329021-36329133)
chr4 (14-149)||(9927831-9927966)
chr4 (15-135)||(12745787-12745908)
chr4 (211-328)||(29055866-29055983)
chr4 (14-126)||(27417539-27417651)
chr4 (14-139)||(25861601-25861727)
chr4 (14-124)||(34570784-34570894)
chr4 (14-128)||(40630450-40630564)
chr4 (20-193)||(5429299-5429472)
chr4 (15-188)||(46570115-46570287)
chr4 (48-143)||(5370479-5370575)
chr4 (14-126)||(41639033-41639145)
chr4 (234-328)||(34570996-34571091)
chr4 (14-128)||(50674434-50674548)
chr4 (14-141)||(5268766-5268894)
chr4 (14-142)||(6742981-6743109)
chr4 (14-125)||(8689079-8689191)
chr4 (70-146)||(18377798-18377874)
chr4 (37-127)||(37740311-37740401)
chr4 (48-193)||(2209122-2209266)
chr4 (14-74)||(5148080-5148140)
chr4 (14-154)||(36994219-36994358)
chr4 (14-105)||(52083027-52083119)
chr4 (14-105)||(52094034-52094126)
chr4 (14-126)||(54867582-54867694)
chr4 (48-139)||(56179028-56179120)
chr4 (14-67)||(16622935-16622988)
chr4 (48-193)||(26176028-26176172)
chr4 (48-128)||(35661905-35661985)
chr4 (37-105)||(54200299-54200367)
chr4 (234-328)||(12740129-12740222)
chr4 (234-328)||(12748335-12748428)
chr4 (14-64)||(16628517-16628567)
chr4 (15-65)||(39773981-39774031)
chr4 (24-147)||(3777961-3778085)
chr4 (48-142)||(12739942-12740037)
chr4 (48-142)||(12748148-12748243)
chr4 (15-72)||(5396327-5396384)
chr4 (210-275)||(36770966-36771031)
chr4 (228-287)||(5137819-5137879)
chr4 (14-74)||(5143663-5143723)
chr4 (25-65)||(38152081-38152121)
chr4 (228-286)||(7124434-7124493)
chr4 (228-286)||(8395136-8395195)
chr4 (88-154)||(13992732-13992797)
chr4 (44-105)||(30000873-30000935)
chr4 (48-125)||(55085955-55086032)
[»] chr7 (52 HSPs)
chr7 (1-195)||(6570210-6570404)
chr7 (15-149)||(47676507-47676642)
chr7 (15-149)||(47674314-47674449)
chr7 (24-139)||(4178447-4178563)
chr7 (14-149)||(14070203-14070339)
chr7 (14-149)||(14380231-14380367)
chr7 (24-139)||(23554712-23554828)
chr7 (1-188)||(6360487-6360673)
chr7 (20-142)||(27347594-27347715)
chr7 (234-328)||(48491083-48491177)
chr7 (24-139)||(19495642-19495759)
chr7 (21-149)||(32358431-32358559)
chr7 (14-154)||(48489089-48489228)
chr7 (14-125)||(2647280-2647391)
chr7 (14-149)||(4585824-4585959)
chr7 (15-149)||(2389737-2389871)
chr7 (15-128)||(43863945-43864058)
chr7 (1-126)||(33332032-33332157)
chr7 (13-141)||(18126316-18126443)
chr7 (14-125)||(4538921-4539032)
chr7 (1-128)||(26416997-26417124)
chr7 (209-295)||(4509388-4509474)
chr7 (209-295)||(4511230-4511316)
chr7 (209-295)||(6431362-6431448)
chr7 (228-328)||(47674529-47674628)
chr7 (14-105)||(2761672-2761763)
chr7 (14-105)||(46515911-46516002)
chr7 (24-105)||(24515140-24515222)
chr7 (20-105)||(1113363-1113448)
chr7 (37-126)||(30026393-30026481)
chr7 (14-74)||(21983645-21983705)
chr7 (24-98)||(35853626-35853701)
chr7 (14-105)||(48491285-48491376)
chr7 (14-72)||(44847762-44847820)
chr7 (13-149)||(49092092-49092230)
chr7 (15-96)||(496365-496446)
chr7 (27-72)||(2479751-2479796)
chr7 (210-275)||(44011265-44011330)
chr7 (24-104)||(3050523-3050603)
chr7 (15-126)||(4796251-4796362)
chr7 (21-74)||(21989317-21989370)
chr7 (228-286)||(6592917-6592976)
chr7 (228-286)||(18390558-18390617)
chr7 (208-286)||(4175357-4175435)
chr7 (14-72)||(47264045-47264103)
chr7 (14-67)||(79792-79845)
chr7 (88-125)||(25767399-25767436)
chr7 (234-275)||(26214631-26214672)
chr7 (109-154)||(48491258-48491302)
chr7 (88-193)||(48599940-48600044)
chr7 (109-193)||(2761746-2761829)
chr7 (228-288)||(9189443-9189503)
[»] chr2 (30 HSPs)
chr2 (12-193)||(36318377-36318559)
chr2 (14-141)||(20522625-20522752)
chr2 (14-139)||(34389253-34389379)
chr2 (19-125)||(40015314-40015420)
chr2 (21-141)||(2837221-2837341)
chr2 (28-139)||(36988459-36988571)
chr2 (24-139)||(45099427-45099543)
chr2 (14-126)||(21630348-21630460)
chr2 (14-105)||(2334787-2334879)
chr2 (24-105)||(5723634-5723716)
chr2 (14-149)||(33528182-33528318)
chr2 (14-141)||(39483279-39483407)
chr2 (28-105)||(4503516-4503594)
chr2 (14-72)||(28258814-28258872)
chr2 (48-139)||(6595398-6595490)
chr2 (23-74)||(17865589-17865640)
chr2 (14-141)||(33118538-33118665)
chr2 (48-135)||(39284574-39284661)
chr2 (88-149)||(45726469-45726530)
chr2 (37-117)||(14698600-14698680)
chr2 (50-149)||(17863855-17863955)
chr2 (14-74)||(23078106-23078166)
chr2 (48-139)||(29867552-29867644)
chr2 (20-149)||(35447477-35447606)
chr2 (28-104)||(36206049-36206126)
chr2 (215-291)||(31056675-31056751)
chr2 (360-403)||(34907585-34907627)
chr2 (21-67)||(8389790-8389836)
chr2 (24-66)||(10706895-10706937)
chr2 (14-67)||(13569733-13569785)
[»] chr6 (40 HSPs)
chr6 (15-139)||(9183381-9183505)
chr6 (1-134)||(21272563-21272696)
chr6 (38-149)||(21593111-21593222)
chr6 (15-96)||(26954674-26954755)
chr6 (24-139)||(5407288-5407404)
chr6 (24-139)||(5411613-5411729)
chr6 (14-142)||(22964101-22964229)
chr6 (14-142)||(23824164-23824292)
chr6 (234-326)||(5406750-5406843)
chr6 (234-326)||(5411075-5411168)
chr6 (1-125)||(24435555-24435679)
chr6 (24-105)||(5413828-5413910)
chr6 (234-326)||(5407518-5407611)
chr6 (234-326)||(5411843-5411936)
chr6 (14-142)||(10076757-10076885)
chr6 (14-149)||(31979920-31980056)
chr6 (20-126)||(603613-603719)
chr6 (24-105)||(5406578-5406660)
chr6 (24-105)||(5410903-5410985)
chr6 (24-105)||(16452820-16452902)
chr6 (24-105)||(30834917-30834999)
chr6 (24-105)||(33160734-33160816)
chr6 (37-127)||(3809320-3809407)
chr6 (228-326)||(16554358-16554458)
chr6 (228-326)||(16630914-16631014)
chr6 (228-326)||(16652620-16652720)
chr6 (14-74)||(18234486-18234546)
chr6 (15-126)||(5571846-5571957)
chr6 (13-67)||(5017137-5017191)
chr6 (14-67)||(31086114-31086167)
chr6 (14-72)||(5757115-5757173)
chr6 (37-122)||(26661421-26661506)
chr6 (37-122)||(26767392-26767477)
chr6 (363-403)||(3050865-3050905)
chr6 (27-67)||(16452712-16452752)
chr6 (24-67)||(31405054-31405097)
chr6 (55-193)||(17759357-17759494)
chr6 (15-72)||(23896736-23896793)
chr6 (228-317)||(34166584-34166670)
chr6 (213-253)||(24543165-24543205)
[»] chr3 (70 HSPs)
chr3 (14-149)||(29812725-29812861)
chr3 (37-328)||(44331052-44331344)
chr3 (15-150)||(49200040-49200175)
chr3 (20-145)||(4569400-4569525)
chr3 (20-149)||(46173179-46173307)
chr3 (24-139)||(7761937-7762052)
chr3 (15-149)||(31340631-31340766)
chr3 (24-139)||(7764124-7764240)
chr3 (24-139)||(9636508-9636624)
chr3 (14-193)||(54593106-54593284)
chr3 (14-149)||(55302553-55302687)
chr3 (15-193)||(34490634-34490811)
chr3 (14-126)||(43404321-43404433)
chr3 (24-139)||(45094836-45094952)
chr3 (14-128)||(5236827-5236941)
chr3 (31-128)||(5258531-5258629)
chr3 (1-126)||(43402365-43402490)
chr3 (37-150)||(44331840-44331953)
chr3 (228-328)||(29812547-29812645)
chr3 (14-148)||(6096188-6096322)
chr3 (24-128)||(3393290-3393394)
chr3 (228-326)||(7763935-7764034)
chr3 (14-126)||(40592353-40592465)
chr3 (14-141)||(29810539-29810666)
chr3 (234-326)||(9634892-9634985)
chr3 (14-149)||(8370037-8370173)
chr3 (14-149)||(21711604-21711740)
chr3 (228-324)||(37407941-37408040)
chr3 (234-328)||(2075572-2075667)
chr3 (234-328)||(40734911-40735005)
chr3 (14-96)||(24694767-24694849)
chr3 (48-126)||(36018330-36018408)
chr3 (20-74)||(36029502-36029556)
chr3 (234-326)||(5258717-5258810)
chr3 (14-67)||(40734243-40734296)
chr3 (14-67)||(47923534-47923587)
chr3 (228-326)||(6718192-6718292)
chr3 (14-126)||(8127033-8127145)
chr3 (14-149)||(16264751-16264887)
chr3 (213-288)||(4386445-4386520)
chr3 (18-72)||(27038448-27038502)
chr3 (14-72)||(37408199-37408257)
chr3 (13-126)||(39032126-39032240)
chr3 (14-139)||(1735863-1735987)
chr3 (41-154)||(23410727-23410840)
chr3 (14-125)||(33386247-33386359)
chr3 (23-67)||(40735174-40735218)
chr3 (14-66)||(40845056-40845108)
chr3 (14-126)||(40912805-40912917)
chr3 (14-74)||(48438618-48438678)
chr3 (15-104)||(53921855-53921946)
chr3 (24-67)||(27027118-27027161)
chr3 (28-105)||(5260707-5260785)
chr3 (14-72)||(37726077-37726135)
chr3 (228-317)||(10057945-10058031)
chr3 (228-317)||(10060167-10060253)
chr3 (228-317)||(10062389-10062475)
chr3 (228-317)||(10064611-10064697)
chr3 (228-317)||(10066833-10066919)
chr3 (15-72)||(27986102-27986159)
chr3 (14-67)||(30709427-30709480)
chr3 (228-326)||(23198526-23198626)
chr3 (228-286)||(4599103-4599162)
chr3 (228-286)||(10210923-10210982)
chr3 (37-126)||(16498752-16498838)
chr3 (14-72)||(27453359-27453417)
chr3 (221-295)||(43402588-43402661)
chr3 (48-149)||(51398488-51398590)
chr3 (109-154)||(24694730-24694775)
chr3 (24-64)||(27974586-27974626)
[»] chr1 (43 HSPs)
chr1 (14-154)||(37033657-37033797)
chr1 (14-193)||(49917969-49918147)
chr1 (1-126)||(16455332-16455457)
chr1 (213-328)||(776751-776866)
chr1 (15-193)||(11348121-11348298)
chr1 (24-139)||(20762344-20762460)
chr1 (14-142)||(31658908-31659036)
chr1 (8-99)||(46064631-46064722)
chr1 (14-128)||(44454843-44454957)
chr1 (213-328)||(50167718-50167839)
chr1 (14-139)||(3189023-3189150)
chr1 (14-139)||(3197840-3197967)
chr1 (14-139)||(3206658-3206785)
chr1 (14-193)||(4553018-4553197)
chr1 (43-125)||(3156554-3156636)
chr1 (14-74)||(13598803-13598863)
chr1 (24-104)||(13316698-13316779)
chr1 (211-295)||(13547837-13547922)
chr1 (15-99)||(29135763-29135847)
chr1 (22-149)||(193057-193184)
chr1 (14-142)||(28223791-28223920)
chr1 (14-126)||(37070170-37070283)
chr1 (14-142)||(10924893-10925021)
chr1 (14-128)||(1833205-1833320)
chr1 (14-72)||(13604259-13604317)
chr1 (1-99)||(22819820-22819918)
chr1 (270-328)||(28221484-28221542)
chr1 (14-142)||(28220596-28220725)
chr1 (14-67)||(29652216-29652269)
chr1 (213-318)||(41360441-41360545)
chr1 (237-328)||(31658721-31658812)
chr1 (228-295)||(19753902-19753969)
chr1 (13-126)||(3282108-3282222)
chr1 (14-104)||(13547677-13547766)
chr1 (14-104)||(13549588-13549677)
chr1 (24-74)||(21536205-21536255)
chr1 (29-66)||(15820053-15820090)
chr1 (37-126)||(13659696-13659782)
chr1 (215-286)||(47703333-47703404)
chr1 (14-104)||(30476818-30476908)
chr1 (229-295)||(31928443-31928509)
chr1 (41-74)||(16124294-16124327)
chr1 (89-125)||(9986895-9986931)
[»] scaffold0014 (1 HSPs)
scaffold0014 (14-149)||(80871-81006)
[»] scaffold0286 (1 HSPs)
scaffold0286 (14-150)||(11002-11138)
[»] scaffold0176 (1 HSPs)
scaffold0176 (15-161)||(17635-17781)
[»] scaffold0066 (1 HSPs)
scaffold0066 (14-188)||(20785-20959)
[»] chr5 (39 HSPs)
chr5 (24-149)||(37438808-37438934)
chr5 (14-149)||(42426605-42426741)
chr5 (14-148)||(13487869-13488001)
chr5 (14-148)||(5057495-5057629)
chr5 (24-139)||(13239425-13239540)
chr5 (234-328)||(13487702-13487796)
chr5 (48-149)||(42428822-42428924)
chr5 (14-149)||(32636486-32636622)
chr5 (69-232)||(3076045-3076210)
chr5 (1-143)||(16650979-16651121)
chr5 (20-105)||(19806113-19806198)
chr5 (15-99)||(535616-535700)
chr5 (14-74)||(12083812-12083872)
chr5 (21-105)||(39468909-39468993)
chr5 (24-105)||(25412468-25412550)
chr5 (228-326)||(29722055-29722156)
chr5 (14-74)||(14520632-14520692)
chr5 (37-149)||(40146712-40146824)
chr5 (232-328)||(42426825-42426921)
chr5 (14-105)||(27015021-27015112)
chr5 (48-139)||(30683312-30683403)
chr5 (13-72)||(36931986-36932045)
chr5 (24-105)||(13342767-13342849)
chr5 (24-97)||(30182302-30182376)
chr5 (14-64)||(38746535-38746585)
chr5 (1-105)||(11181433-11181537)
chr5 (228-326)||(16408981-16409081)
chr5 (13-72)||(11916608-11916667)
chr5 (221-275)||(535459-535513)
chr5 (14-72)||(9352971-9353029)
chr5 (88-149)||(213007-213068)
chr5 (1-65)||(16649980-16650044)
chr5 (14-66)||(31004796-31004848)
chr5 (27-67)||(36074427-36074467)
chr5 (228-286)||(16546161-16546220)
chr5 (228-286)||(40381834-40381893)
chr5 (109-147)||(11181412-11181450)
chr5 (48-126)||(38746456-38746534)
chr5 (48-105)||(533488-533545)
[»] scaffold0002 (1 HSPs)
scaffold0002 (24-126)||(434217-434321)
[»] scaffold0006 (4 HSPs)
scaffold0006 (14-74)||(6088-6148)
scaffold0006 (14-72)||(2896-2954)
scaffold0006 (14-72)||(132916-132974)
scaffold0006 (37-126)||(149457-149543)
[»] scaffold0087 (2 HSPs)
scaffold0087 (14-72)||(43598-43656)
scaffold0087 (14-154)||(36387-36527)
[»] scaffold0491 (1 HSPs)
scaffold0491 (228-326)||(9304-9404)
[»] scaffold0140 (1 HSPs)
scaffold0140 (13-72)||(8054-8113)
[»] scaffold0016 (1 HSPs)
scaffold0016 (24-128)||(114270-114374)
[»] scaffold0098 (1 HSPs)
scaffold0098 (14-169)||(45601-45756)
[»] scaffold0466 (2 HSPs)
scaffold0466 (14-105)||(6816-6907)
scaffold0466 (109-149)||(6793-6833)
[»] scaffold1908 (1 HSPs)
scaffold1908 (255-328)||(1041-1114)
[»] scaffold0510 (1 HSPs)
scaffold0510 (24-72)||(1247-1295)
[»] scaffold0084 (1 HSPs)
scaffold0084 (88-127)||(25531-25570)


Alignment Details
Target: chr8 (Bit Score: 399; Significance: 0; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 1 - 403
Target Start/End: Complemental strand, 10014970 - 10014568
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014970 tgtcacaattggtcaaatcgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 10014871  T
Q  101 gattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatttgtaaca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014870 gattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatttgtaaca 10014771  T
Q  201 tgctcaaatcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttctt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014770 tgctcaaatcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttctt 10014671  T
Q  301 ttcccttgcatctaactacaccaagtagttacaccgaacgggagatattacaaacttgatgttaaaaaatgttgggataatttattttgtcacttgatga 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014670 ttcccttgcatctaactacaccaagtagttacaccgaacgggagatattacaaacttgatgttaaaaaatgttgggataatttattttgtcacttgatga 10014571  T
Q  401 tgt 403  Q
    |||    
T  10014570 tgt 10014568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 4743563 - 4743743
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaa 112  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||| ||||||||||| | | |||||||||||| | || | |||||    
T  4743563 caaattgtgacacggttgatgcgtacgacccacggtacgaccaaccttatcctgaaaaacgtgccaagcaagtcgaaaatcgtgtcacgtttcctcaaaa 4743662  T
Q  113 tcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
    |||||||||||||||| |||||  |||||||||||||| ||| |  |||||||| |||| | ||| |||||||||| ||||    
T  4743663 tcgtgtcacgattggacacccttcaaaacatgctcacggcattgcgaaattgtgacatgcttcactaatcgtgtcacgatt 4743743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 42435579 - 42435715
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| ||||||||| | | |||||||||||| | || ||||||||    
T  42435579 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgccaagcaagacgaaaatcgtgtcacgtttccccaaaat 42435678  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacg 150  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  42435679 cgtgtcacgattggacaccctgcaaaacatgctcacg 42435715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 1746598 - 1746714
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||| |||||||||||||||||    
T  1746598 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 1746697  T
Q  123 attggaaaccctgaaaa 139  Q
    ||||||  |||||||||    
T  1746698 attggacgccctgaaaa 1746714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 15212583 - 15212448
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||  |||| ||| |||||||||||| | || |||||||||    
T  15212583 aaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgttttcccaaaatc 15212484  T
Q  115 gtgtcacgattggaaaccctg-aaaaacatgctcac 149  Q
    |||||||||||||| |||||| |||| |||||||||    
T  15212483 gtgtcacgattggacaccctgcaaaaccatgctcac 15212448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 30143140 - 30143003
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| |||||||||| |||||||||||||||||||  |||| || | |||| ||| ||||||||||||   || ||||||||    
T  30143140 caaatcgtgacacggttggtgcgtacgacccaaagtacgaccaaccttatccttaaaacttgtccagcaagccgaaaatcgtgtcacattttcccaaaat 30143041  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacga 151  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  30143040 cgtgtcacgattggacaccctgcaaaacatgctcacga 30143003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 4731456 - 4731317
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||  ||| ||| |||| |||||||||||||||| ||||| ||| ||||||| | |||| ||| |||||| ||||||| || ||||||||    
T  4731456 caaatcgtgacacagttggtgcctacggcccaaggtacgaccaatcttattctgaaaacgtgtccagcaagccgaaaatcatgtcatgttttcccaaaat 4731357  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacgacat 154  Q
    ||||||||||||||| |||||| |||||| |||||||||||    
T  4731356 cgtgtcacgattggacaccctgtaaaaca-gctcacgacat 4731317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 34254708 - 34254824
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||| ||||  ||||||||||||||| |||| ||||||||||||||| |    
T  34254708 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaatccaaaaatcgtgtcacgatttcccaaaatcgtgtcatg 34254807  T
Q  123 attggaaaccctgaaaa 139  Q
    ||| ||  |||||||||    
T  34254808 attagacgccctgaaaa 34254824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 34256884 - 34257000
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| ||||||||||||||| ||||| ||||||||| ||| | |||  |||| |||||||||||||||| |||| |||||||||||||||||    
T  34256884 cacgattgatgcgtacgacccaaggtacaaccaatcttatcctgaaaatcttgctcagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 34256983  T
Q  123 attggaaaccctgaaaa 139  Q
    ||||||  |||||||||    
T  34256984 attggacgccctgaaaa 34257000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 43036221 - 43036085
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||| ||||||||||| ||||||||||||| |||| |||| | || | | |||||||||||| | ||  |||||||    
T  43036221 caaatcgtgacacgtttggtgcgtacgatccaaggtacgatcaaccttatcctgaaaacttgcccaacaagtcgaaaatcgtgtcacgtttttccaaaat 43036122  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacg 150  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  43036121 cgtgtcacgattggacaccctgcaaaacatgctcacg 43036085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 11383585 - 11383451
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||||||| |||||||||| ||||||||||||||||| || |||  |||| |||| ||  |||||||||||| | || |||||||||    
T  11383585 aaatcgtgacacggttgatgcgtacgacccaaagtacgaccaaccttatcttgaaaatttgcccagcaagctgaaaatcgtgtcacgttttcccaaaatc 11383486  T
Q  115 gtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    ||||||| |||||| ||||| |||| |||||||||    
T  11383485 gtgtcacaattggacaccctaaaaaccatgctcac 11383451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 22976108 - 22975983
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 119  Q
    |||||||| ||| ||| | |||||||| ||||||| |||||||||||| |||| || |||||| ||  |||||||||||| | || ||||||||||||||    
T  22976108 gtgacacgtttggtgcgtgcgacccaatgtacgacaaaccttatcctgaaaacttgtcaagcaagctgaaaatcgtgtcacgttttcccaaaatcgtgtc 22976009  T
Q  120 acgattggaaaccctgaaaaacatgc 145  Q
    ||||||||| |||||||||| |||||    
T  22976008 acgattggacaccctgaaaaccatgc 22975983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 42498003 - 42497887
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| || ||||||||||||||| |||||||||||| ||| | |||| |||| ||||| ||||||||||  ||| |||||||||||||||||    
T  42498003 cacgattgatgcgtaggacccaaggtacgactaaccttatcctgaaaatcttgcccagcaagccaataatcgtgtcacaatttcccaaaatcgtgtcacg 42497904  T
Q  123 attggaaaccctgaaaa 139  Q
    ||||||  |||||||||    
T  42497903 attggacgccctgaaaa 42497887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 3051534 - 3051609
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 99  Q
    ||||||||||||||||||||||| ||||||||||||||||| || ||||||| ||| |||||||||||||||||||    
T  3051534 cacgattgatgcatacgacccaatgtacgaccaaccttatcttgaaaacgtgtcaaacatgccaaaaatcgtgtca 3051609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 10014303 - 10014242
Alignment:
Q  171 ggtccacaaatcgtgtcatgatttgtaacatgctcaaatcatttttgagtcactttgcaaca 232  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  10014303 ggtccacaaatcgtgtcacgatttgcaacatgctcaaatcatttttgagtcactttgcaaca 10014242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 19945710 - 19945835
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    |||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||| ||| | | || | || |||||||||||||||| |||| || |||||    
T  19945710 aaatcgtgccacgattgatgcgtacgatccaaggtacgatcaaccttatcctgaaaatcttccccaacaagccaaaaatcgtgtcacgatttcctaaaat 19945809  T
Q  114 cgtgtcacgattggaaaccctgaaaa 139  Q
    |||||||||||||||  |||||||||    
T  19945810 cgtgtcacgattggacgccctgaaaa 19945835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 27811095 - 27810970
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||| ||| ||| ||||||| ||||||||||||||||||| |||| |||| |||| ||| ||||||||||||   || | |||||||    
T  27811095 aaatcgtgacacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacattttctcaaaatc 27810996  T
Q  115 gtgtcacgattggaaaccctgaaaaa 140  Q
    |||||||||||||| |||||| ||||    
T  27810995 gtgtcacgattggacaccctgcaaaa 27810970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 34254900 - 34254993
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaagt 326  Q
    |||||||||||||||  ||| ||||||||||| ||||||||| || |||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  34254900 ttctccaccttgacttcaaattgatgatgatgtcactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactacaccaagt 34254993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 328
Target Start/End: Complemental strand, 4733622 - 4733309
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||| ||| |||||||||||||||||| |||  ||||||| |||||||   || | ||| |||||||||||| | || |||||||||    
T  4733622 aaatcgtgacacggttggtgcgtacgacccaaggtacgacaaactgtatcctgaaaacgtgtttagaaagccgaaaatcgtgtcacgttttcccaaaatc 4733523  T
Q  115 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatttgtaacatgc-tcaaa-tcat 212  Q
    |||||||||||| | |||||| |||||| ||||||||||| |  |||| ||| ||  ||   |||||||||||||||||  | || | | ||||| |||     
T  4733522 gtgtcacgattgaacaccctggaaaaca-gctcacgacattgcgaaatcgtgacacagttgccaaatcgtgtcatgattcttcactttcttcaaactcaa 4733424  T
Q  213 ttttg-agtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcat 311  Q
    ||||| || || |   ||||| |||||||||||| ||  ||| ||||||||||||||| |||||  | |||||||| |  |||||||||||||||  |||    
T  4733423 ttttgaaggca-tacacaaca-ttctccaccttggcttcaaattgatgatgatgccacattaaccttcaaccaccaattcccttttcttttccctgacat 4733326  T
Q  312 ctaactacaccaagtag 328  Q
    | |||||||||||||||    
T  4733325 ccaactacaccaagtag 4733309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 31218045 - 31217929
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| || || ||||||||||||||||||||||||  ||| | |||| | || |||||||||||||||| |||| ||||||||||||||||     
T  31218045 cacgattgatgcgtatgatccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcaca 31217946  T
Q  123 attggaaaccctgaaaa 139  Q
    ||||||  |||||||||    
T  31217945 attggacgccctgaaaa 31217929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 4283117 - 4283035
Alignment:
Q  23 acacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||||||| |||||    
T  4283117 acacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgattg 4283035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 12703009 - 12703134
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| ||||||||  || ||| |||||||||| |||||||||||||||||||| || | |||  |||| ||  |||||||||||| | || ||||||||    
T  12703009 caaatcgtgacacgtatggtgcgtacgacccaatgtacgaccaaccttatcctgaaagcttgcttagcaagctgaaaatcgtgtcacgttttcccaaaat 12703108  T
Q  114 cgtgtcacgattggaaaccctgaaaa 139  Q
    ||||||||||||||| || |||||||    
T  12703109 cgtgtcacgattggacactctgaaaa 12703134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 40220186 - 40220271
Alignment:
Q  210 catttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 295  Q
    |||||||||||||  |  ||||| ||||||||||||||||||||||||||||||||| | |||||| || ||||||||||||||||    
T  40220186 catttttgagtcatatctcaacaattctccaccttgactctaaaatgatgatgatgctaatttaaccatcaaccaccattctcctt 40220271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 10929567 - 10929492
Alignment:
Q  50 acgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 125  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||| ||| |||||  ||||||||||||||||||    
T  10929567 acgaccaaccttatcctcaaaacgtgtcaagcatgccaaaaatcgtatcacgattgatcaaaatcgtgtcacgatt 10929492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 40221343 - 40221230
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||| ||| |||||||||||| ||||| |||||||||||| ||||||| | | || ||  |||||||||||| | || |||||||||    
T  40221343 aaatcgtgacacgtttggtgcgtacgacccaaggcacgacaaaccttatcctgaaaacgtgtccaacaagctgaaaatcgtgtcacgttttcccaaaatc 40221244  T
Q  115 gtgtcacgattgga 128  Q
    ||| ||||||||||    
T  40221243 gtgacacgattgga 40221230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 17982441 - 17982359
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||| ||||||||||||||||||||||||  ||| | |||| |||| |||||||||||||||| |||||    
T  17982441 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 17982359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 1345745 - 1345873
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggt--acgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtg 117  Q
    |||||| | ||||||| |||||||||||||  |||||||||||||||||| ||||||| |||||| ||  ||||| ||||||  |||  |  ||||||||    
T  1345745 gtgacatggttgatgcgtacgacccaaggtgtacgaccaaccttatcctgaaaacgtgtcaagcaagctgaaaattgtgtca-cattttctcaaatcgtg 1345843  T
Q  118 tcacgattggaaaccctgaaaaacatgctc 147  Q
    ||||||||| | |||||| | |||||||||    
T  1345844 tcacgattgaacaccctgcagaacatgctc 1345873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 4696321 - 4696259
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 77  Q
    |||| ||| |||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||    
T  4696321 aaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcc 4696259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 44303638 - 44303560
Alignment:
Q  28 attgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||| || || ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  44303638 attgatgcgtatgatccaaggtacgaccaaccttatcctggaaatcttgcccagcaagccaaaaatcgtgtcacgattg 44303560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 19175427 - 19175314
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| ||| |||||||| ||||||||||||||||||  ||||||||||||||| |||||| || |||| |    |||||| ||||| | || |||||||    
T  19175427 caaatcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcatgtcacgttttcccaaaa 19175328  T
Q  113 tcgtgtcacgattg 126  Q
    ||||| ||||||||    
T  19175327 tcgtgacacgattg 19175314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 318
Target Start/End: Original strand, 19492236 - 19492340
Alignment:
Q  213 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatc 312  Q
    |||||||||| ||| |||||||||||||||||||||||||  ||||| ||||| ||  ||||| || |||||||||||| || ||| | | |||||||||    
T  19492236 ttttgagtcaattttcaacatttctccaccttgactctaatttgatggtgatgtca-attaaccatcaaccaccattcttctcttcatattccttgcatc 19492334  T
Q  313 taacta 318  Q
     |||||    
T  19492335 caacta 19492340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 26268766 - 26268827
Alignment:
Q  213 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaac 275  Q
    |||||||| ||||| |||||||||||||||||||||||||| |  ||||||||||| ||||||    
T  26268766 ttttgagtaacttt-caacatttctccaccttgactctaaattagtgatgatgccaatttaac 26268827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 5702174 - 5702121
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||| |||||||||||| ||| ||| | |||||||||||||||||||||||||    
T  5702174 caaatcgtgacacgattggtgcgtacaatccaaggtacgaccaaccttatcctg 5702121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 324
Target Start/End: Original strand, 41365408 - 41365500
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttc--ccttgcatctaactacaccaa 324  Q
    |||||||||||| ||  ||| ||||||||||||||||||||| || || ||||| || ||||||  ||||  ||||||||| |||||||||||    
T  41365408 ttctccaccttgccttcaaattgatgatgatgccactttaaccatcaatcaccaatcccctttttctttcttccttgcatccaactacaccaa 41365500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 17849569 - 17849500
Alignment:
Q  208 atcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaat 278  Q
    |||| |||||||||||||| ||||  |||||||||||||||||||| |  |||||||| || |||||||||    
T  17849569 atcaattttgagtcacttt-caactattctccaccttgactctaaattagtgatgatgtcaatttaacaat 17849500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 19948701 - 19948783
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||| ||||||||||||||| |||||| |  ||| | || | |||| |||||||||||||||| |||||    
T  19948701 cacgattgatgcgtacgatccaaggtacgaccaaacttatcataaaaatcttgtccagcaagccaaaaatcgtgtcacgattg 19948783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 33351888 - 33351842
Alignment:
Q  95 tgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaac 141  Q
    ||||||| || ||||||||||||||||||||||| |||||| |||||    
T  33351888 tgtcatgttttcccaaaatcgtgtcacgattggacaccctgcaaaac 33351842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 33351941 - 33351895
Alignment:
Q  21 tgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||||| ||| ||| || ||||||||||||||||||||||||||||    
T  33351941 tgacacgtttggtgcgtatgacccaaggtacgaccaaccttatcctg 33351895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 23799270 - 23799221
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttat 63  Q
    ||||| ||||||| |||| ||| |||||||||| ||||||||||||||||    
T  23799270 caaatcgtgacacaattggtgcgtacgacccaacgtacgaccaaccttat 23799221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 2627464 - 2627428
Alignment:
Q  89 aaatcgtgtcatgattgcccaaaatcgtgtcacgatt 125  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  2627464 aaatcgtgtcacgatttcccaaaatcgtgtcacgatt 2627428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 15949195 - 15949132
Alignment:
Q  211 atttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaac 275  Q
    |||||| |||| |||| |||||||||||||||||||||||||| ||  |||||| ||| ||||||    
T  15949195 attttttagtcgcttt-caacatttctccaccttgactctaaattggcgatgataccaatttaac 15949132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 3909893 - 3909715
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||||||| |||||| ||||||||||||||||||||| |  ||||||||||| |||||||||||| |||||||| || || ||||||    
T  3909893 aaatcgtgacacggttgatgcgtacgactcaaggtacgaccaaccttatctta-aaacgtgccaaacatgccaaaaatagtgtcatgttttccaaaaatc 3909795  T
Q  115 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgattt 194  Q
    ||||||||||| || ||| || |||||||||||||||||| | ||||| ||| |||| | || ||||||||||| |||||    
T  3909794 gtgtcacgatttgacaccgtgcaaaacatgctcacgacattgcaaaatcgtgacatgcttcaaaaatcgtgtcacgattt 3909715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 52095740 - 52095856
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| | || |||||||||||||||||    
T  52095740 cacgattgatgcttacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 52095839  T
Q  123 attggaaaccctgaaaa 139  Q
    |||||| ||||||||||    
T  52095840 attggacaccctgaaaa 52095856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 6655536 - 6655400
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| |||||||||| |||||||||||||||||||| |||| |||| ||||  || ||||||||||||   || ||||||||    
T  6655536 caaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacatttccccaaaat 6655437  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacg 150  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  6655436 cgtgtcacgattggacaccctgcaaaacatgctcacg 6655400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 26363845 - 26363720
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    |||||||||||||| ||| ||| |||||||||||||| |||||||||||||||| |||| |||  |||| ||| |||||||||||| | || ||||||||    
T  26363845 caaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgttttcccaaaat 26363746  T
Q  114 cgtgtcacgattggaaaccctgaaaa 139  Q
    ||||||||||||||| ||||| ||||    
T  26363745 cgtgtcacgattggacaccctaaaaa 26363720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 239 - 330
Target Start/End: Complemental strand, 54882411 - 54882320
Alignment:
Q  239 caccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtagtt 330  Q
    |||||||||||||||||||||||||||| | |||||| || ||||||||||||||||| | ||||||||||||| |||||||||||||||||    
T  54882411 caccttgactctaaaatgatgatgatgctaatttaaccatcaaccaccattctcctttacctttcccttgcatccaactacaccaagtagtt 54882320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 54882619 - 54882485
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||||||| |||  ||| ||| ||||||||||||||||| ||||||||||||| ||||||| | | || ||| |||||||||||| | || |||||||||    
T  54882619 aaattgtgtcacagttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaacgtgtccaacaagccgaaaatcgtgtcacgttttcccaaaatc 54882520  T
Q  115 gtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    |||||||||||||| |||||| ||| |||||||||    
T  54882519 gtgtcacgattggacaccctgcaaaccatgctcac 54882485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 24968898 - 24968801
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcac 121  Q
    ||||||||| || |||||||||| |||||||||||||||||||| ||||||| ||||||||| ||| ||||||||| |||||| ||||||||||||||    
T  24968898 cacgattgaagcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgtcaagcatgctaaatatcgtgtcacgattgcacaaaatcgtgtcac 24968801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 36314924 - 36314812
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| |||| |   |||||||||||| | || ||||||||    
T  36314924 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaat 36314825  T
Q  114 cgtgtcacgattg 126  Q
    |||| ||||||||    
T  36314824 cgtgacacgattg 36314812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 36329133 - 36329021
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| |||| |   |||||||||||| | || ||||||||    
T  36329133 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaat 36329034  T
Q  114 cgtgtcacgattg 126  Q
    |||| ||||||||    
T  36329033 cgtgacacgattg 36329021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 9927831 - 9927966
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| |||||||||||| |||||||||||||||||| |||| || | |||| ||| ||||||||||||   || ||||||||    
T  9927831 caaatcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacattttcccaaaat 9927930  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    ||||||||||||| | |||||| |||||||| ||||    
T  9927931 cgtgtcacgattgaacaccctgcaaaacatgttcac 9927966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 12745787 - 12745908
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct-gtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    |||| ||||||||||||  || |||||||||||||||||||||||||||||| | |||| |||| |||| ||| |||||||||||| | || ||||||||    
T  12745787 aaatcgtgacacgattggcgcgtacgacccaaggtacgaccaaccttatcctggaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaat 12745886  T
Q  114 cgtgtcacgattggaaaccctg 135  Q
    | ||||||||||||| ||||||    
T  12745887 catgtcacgattggacaccctg 12745908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 211 - 328
Target Start/End: Complemental strand, 29055983 - 29055866
Alignment:
Q  211 atttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgca 310  Q
    ||||||||||||  || |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| | | | ||||| ||| |||| ||    
T  29055983 atttttgagtcaaattacaacatttctccaccttgactctaaaatgatggtgatgccaatttaacaattaaccaccttaccctttttcattttccttcca 29055884  T
Q  311 tctaactacaccaagtag 328  Q
    || |||||||||| ||||    
T  29055883 tccaactacaccatgtag 29055866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 27417539 - 27417651
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| || |||||| | || |   |||||||||||| | || ||||||||    
T  27417539 caaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaccgtgccgaacaagttgaaaatcgtgtcacgttttcccaaaat 27417638  T
Q  114 cgtgtcacgattg 126  Q
    |||||||||||||    
T  27417639 cgtgtcacgattg 27417651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 25861727 - 25861601
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatg-attgcccaaaa 112  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||| |||| |   |||||||||||| |  || |||||||    
T  25861727 caaatcgtgacacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagcaagttgaaaatcgtgtcacgtttttcccaaaa 25861628  T
Q  113 tcgtgtcacgattggaaaccctgaaaa 139  Q
    ||||| ||||||||   ||||||||||    
T  25861627 tcgtgacacgattgagcaccctgaaaa 25861601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 34570784 - 34570894
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| |||| || | |||| ||| |||||||||||| | || ||||||||    
T  34570784 caaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgttttcccaaaat 34570883  T
Q  114 cgtgtcacgat 124  Q
    |||||||||||    
T  34570884 cgtgtcacgat 34570894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 40630564 - 40630450
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| |||||| |||||||||||||||||||||||| ||| ||| ||||| |||| ||  |||||||||||| | || ||||||||    
T  40630564 caaatcgtgacacgtttggtgcatatgacccaaggtacgaccaaccttattctgaaaatgtgcctagcaagctgaaaatcgtgtcacgttttcccaaaat 40630465  T
Q  114 cgtgtcacgattgga 128  Q
    |||| ||||||||||    
T  40630464 cgtgacacgattgga 40630450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 5429472 - 5429299
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 119  Q
    |||||||||||| ||| ||||||||||||||||||||| |||| |||| |||| || | | || ||  |||||||| ||| | || ||||||||||||||    
T  5429472 gtgacacgattggtgcgtacgacccaaggtacgaccaatcttaacctgaaaacttgtccaacaagctgaaaatcgtatcacgttttcccaaaatcgtgtc 5429373  T
Q  120 acgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
    |||||| || |||||| ||||||||||| | |||| | ||||| ||| || | |   |||||||||||||||||    
T  5429372 acgattagacaccctgcaaaacatgctctcaacattgcaaaatcgtgacacgcttaccaaatcgtgtcatgatt 5429299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 46570115 - 46570287
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||||||| |||||||||| |||||||||||||||||||| |||  |||| |||| ||| ||||| |||||| | || |||||||||    
T  46570115 aaatcgtgacacgtttgatgcgtacgacccaaagtacgaccaaccttatcctgaaaatttgcccagcaagccgaaaattgtgtcacgttttcccaaaatc 46570214  T
Q  115 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtca 188  Q
     ||||||||||||  |||||| | |||| |||| ||||||   ||||| ||| || | | ||||||||||||||    
T  46570215 ttgtcacgattgggcaccctgcagaaca-gctctcgacatttcaaaatcgtgacacgcttcacaaatcgtgtca 46570287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 143
Target Start/End: Original strand, 5370479 - 5370575
Alignment:
Q  48 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacat 143  Q
    |||||||||||||||||||| ||  | |||| |||| |||||||||||||||| |||| |||||||||||||||||||||||  |||||||||||||    
T  5370479 gtacgaccaaccttatcctgaaagtcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattggacgccctgaaaaacat 5370575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 41639145 - 41639033
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||  ||||||| ||||||||||||||||||||||||||||||| ||||||||| | || |   |||||||||||| | ||  |||||||    
T  41639145 caaatcgtgacacagttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagttgaaaatcgtgtcacgtttttccaaaat 41639046  T
Q  114 cgtgtcacgattg 126  Q
    |||||||||||||    
T  41639045 cgtgtcacgattg 41639033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 328
Target Start/End: Original strand, 34570996 - 34571091
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaagtag 328  Q
    ||||||||||| |||  ||| ||||||||||||||||||||| || |||||||| | ||| ||||||||||||||||||| |||||||||||||||    
T  34570996 ttctccaccttaacttcaaattgatgatgatgccactttaaccatcaaccaccaatttcctttttcttttcccttgcatccaactacaccaagtag 34571091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 50674434 - 50674548
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| ||||||||| |||| ||  |||||| ||||| | || ||||||||    
T  50674434 caaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtcacgttttcccaaaat 50674533  T
Q  114 cgtgtcacgattgga 128  Q
    |||  ||||||||||    
T  50674534 cgtaacacgattgga 50674548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 5268894 - 5268766
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||| || | || |    |||||||||||| | || |||||||    
T  5268894 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaa 5268795  T
Q  113 tcgtgtcacgattggaaaccctgaaaaac 141  Q
    ||||| ||||||||   ||||||||||||    
T  5268794 tcgtgacacgattgagcaccctgaaaaac 5268766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 6743109 - 6742981
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||  ||| |||| |||||||||||||||||||||||||| ||||||||| | || |   |||||||||||| | || |||||||     
T  6743109 caaatcgtgacacgattagtgcgtacgtcccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagtttaaaatcgtgtcacgttttcccaaaaa 6743010  T
Q  114 cgtgtcacgattggaaaccctgaaaaaca 142  Q
    |||| ||||||| |  |||||||||||||    
T  6743009 cgtgccacgattaggcaccctgaaaaaca 6742981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 8689191 - 8689079
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||| |||||| || |||| |    |||||||||||| | || |||||||    
T  8689191 caaatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaa 8689092  T
Q  113 tcgtgtcacgatt 125  Q
    |||||||||||||    
T  8689091 tcgtgtcacgatt 8689079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 18377798 - 18377874
Alignment:
Q  70 aacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgct 146  Q
    |||||| |||||||||||||||||||||||||||||| | |||||||||||| |||| | |||| ||||||||||||    
T  18377798 aacgtgtcaagcatgccaaaaatcgtgtcatgattgctcgaaatcgtgtcacaattgaacacccagaaaaacatgct 18377874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 37740401 - 37740311
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgg 127  Q
    ||||||||||||||||||||||||||||||| |||| ||||  ||| ||| |||||| ||||| | || ||||||||||||| ||||||||    
T  37740401 tacgacccaaggtacgaccaaccttatcctgaaaacttgccctgcaagccgaaaatcatgtcacgttttcccaaaatcgtgttacgattgg 37740311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 2209266 - 2209122
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 147  Q
    |||||||||||||||||||| |||| |||| ||||  || |||||||||||| | || ||||||||||||||||||||||  || ||| |||||| ||||    
T  2209266 gtacgaccaaccttatcctgaaaacttgcctagcaaaccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattgggcactctgcaaaaca-gctc 2209168  T
Q  148 acgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
     |||||| | ||||| ||| || | | || ||||||||||| ||||    
T  2209167 tcgacattgcaaaatcgtgacacgcttcaaaaatcgtgtcacgatt 2209122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 5148080 - 5148140
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  5148080 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 5148140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 36994358 - 36994219
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||| ||||||||| ||||||||||  | ||||||||| |||| ||| ||||| ||| || | || || |||||    
T  36994358 caaatcgtgacacggttggtgcgtacgacctaaggtacgatcaaccttatctagaaaacgtgcctagcaagccgaaaattgtgacacgttttccaaaaat 36994259  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacgacat 154  Q
     |||||||||||||| || | | ||||||||||||||||||    
T  36994258 tgtgtcacgattggacactcag-aaaacatgctcacgacat 36994219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 52083027 - 52083119
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    ||||| ||| |||||||||||| |||||||||||||| |||||||||||||||| ||| | |||| | || |||||||||||||||| |||||    
T  52083027 caaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 52083119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 52094034 - 52094126
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    ||||| ||| |||||||||||| |||||||||||||| |||||||||||||||| ||| | |||| | || |||||||||||||||| |||||    
T  52094034 caaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 52094126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 54867582 - 54867694
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||| ||||| |||||||||||||||||||||||   ||||||||| |||| |   |||||||||||| | || ||||||||    
T  54867582 caaatcgtgacacgattggtgcgtacgatccaaggtacgaccaaccttatccgaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaat 54867681  T
Q  114 cgtgtcacgattg 126  Q
     ||| ||||||||    
T  54867682 tgtgacacgattg 54867694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 56179028 - 56179120
Alignment:
Q  48 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 139  Q
    |||||||||||||||||||| ||| | |||| |||| |||||||||| ||||| | || |||||||||||||||||||||||  |||||||||    
T  56179028 gtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcatgtcacgttttcccaaaatcgtgtcacgattggacgccctgaaaa 56179120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 16622988 - 16622935
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  16622988 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctg 16622935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 193
Target Start/End: Original strand, 26176028 - 26176172
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctc 147  Q
    |||||||||||||||||||| |||| |||| | || ||| |||||||||||| | || |||||||| |||||||| ||||  |||||| |||||| ||||    
T  26176028 gtacgaccaaccttatcctgaaaacttgcccatcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacggttgggcaccctgcaaaaca-gctc 26176126  T
Q  148 acgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
     |||||| | ||||| ||| || | | ||||||| |||||| ||||    
T  26176127 tcgacattgcaaaatcgtgacacgcttcacaaattgtgtcacgatt 26176172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 35661985 - 35661905
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgga 128  Q
    |||||||||||||||||||| ||||||||| | || ||| ||||||||| ||   || |||||||||||||||||||||||    
T  35661985 gtacgaccaaccttatcctgaaaacgtgcccaacaagccgaaaatcgtgacacattttcccaaaatcgtgtcacgattgga 35661905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 54200299 - 54200367
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||||||||||||||||||| || |||| |||| |||| ||| |||||||||||| |||||    
T  54200299 tacgacccaaggtacgaccaaccttatcttgaaaacttgcccagcaagccgaaaatcgtgtcacgattg 54200367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 328
Target Start/End: Original strand, 12740129 - 12740222
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 328  Q
    |||||||||||||||  ||| |||| |||||||||||||| | || |||||  | || ||||||||||| ||||||||| |||||||||||||||    
T  12740129 ttctccaccttgacttcaaattgataatgatgccactttagccatcaaccagtaatccccttttctttt-ccttgcatccaactacaccaagtag 12740222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 328
Target Start/End: Original strand, 12748335 - 12748428
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 328  Q
    |||||||||||||||  ||| |||| |||||||||||||| | || |||||  | || ||||||||||| ||||||||| |||||||||||||||    
T  12748335 ttctccaccttgacttcaaattgataatgatgccactttagccatcaaccagtaatccccttttctttt-ccttgcatccaactacaccaagtag 12748428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 16628567 - 16628517
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatc 64  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  16628567 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatc 16628517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 39774031 - 39773981
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcc 65  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  39774031 aaattgtgtcacgattgatgcgtatgacccaaggtacgaccaaccttatcc 39773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 3777961 - 3778085
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagc-atgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||| ||| |||||||||||||||||||||||||||| || |||||| || ||| |     |||||||||||| | || |||||||||||| ||||    
T  3777961 cacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacgtaccgagcaaatttgaaaatcgtgtcacgttttcccaaaatcgtgacacg 3778060  T
Q  123 attggaaaccctgaaaaacatgctc 147  Q
    ||||   |||||| ||| |||||||    
T  3778061 attgagcaccctgcaaaccatgctc 3778085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 12739942 - 12740037
Alignment:
Q  48 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 142  Q
    |||||||||||||||||||| ||| | |||| |||| ||||||||| |||| | | || |||||||||||||| || ||||| |||||| ||||||    
T  12739942 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtcgcggttggacaccctgcaaaaca 12740037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 12748148 - 12748243
Alignment:
Q  48 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaaca 142  Q
    |||||||||||||||||||| ||| | |||| |||| ||||||||| |||| | | || |||||||||||||| || ||||| |||||| ||||||    
T  12748148 gtacgaccaaccttatcctgaaaaacttgcccagcaagccaaaaattgtgttacgttttcccaaaatcgtgtcgcggttggacaccctgcaaaaca 12748243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 5396384 - 5396327
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    |||| ||| |||||||| ||| ||||||||||||||||| ||||||||||||| ||||    
T  5396384 aaatcgtggcacgattggtgcgtacgacccaaggtacgatcaaccttatcctgaaaac 5396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 36771031 - 36770966
Alignment:
Q  210 catttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaac 275  Q
    |||||||||||||||||  |||| |||| |||||||||||||||||  ||||||||| | ||||||    
T  36771031 catttttgagtcactttttaacaattcttcaccttgactctaaaatagtgatgatgcaaatttaac 36770966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 5137879 - 5137819
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacca 287  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || ||||||||    
T  5137879 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacca 5137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 5143663 - 5143723
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||| |||||||||||| |||  || ||||||||| ||||||||||||||||| ||||||    
T  5143663 caaatcgtgacacgattggtgcgcacaacccaaggtgcgaccaaccttatcctgaaaacgt 5143723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 38152121 - 38152081
Alignment:
Q  25 acgattgatgcatacgacccaaggtacgaccaaccttatcc 65  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  38152121 acgattgatgcgtacgatccaaggtacgaccaaccttatcc 38152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 7124493 - 7124434
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacc 286  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  7124493 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 7124434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 8395195 - 8395136
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacc 286  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  8395195 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 8395136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 13992732 - 13992797
Alignment:
Q  88 aaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 154  Q
    |||||||||||| |||| |||||||||||||||||||| |  |||||| ||| || |||||||||||    
T  13992732 aaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaacca-gctcacgacat 13992797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 30000873 - 30000935
Alignment:
Q  44 caaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||||||||||||||  ||| | |||| |||| |||||||||||||||| |||||    
T  30000873 caaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 30000935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 55085955 - 55086032
Alignment:
Q  48 gtacgaccaacctt-atcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 125  Q
    |||||||||||||| |||||| || ||||||||||||||| ||||||||| || | || ||| ||||||||||| ||||    
T  55085955 gtacgaccaacctttatcctgaaagcgtgccaagcatgcccaaaatcgtgccacgttttccc-aaatcgtgtcatgatt 55086032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 8e-37; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 6570404 - 6570210
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    |||||| ||||| ||||| |||||||| ||||||| || |||||||||||||| ||||||||||||  ||||||| |||||||||||||||||||||||     
T  6570404 tgtcacgattggccaaatcgtgacacggttgatgcgtatgacccaaggtacgatcaaccttatcctaaaaacgtgtcaagcatgccaaaaatcgtgtcac 6570305  T
Q  101 gattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatttg 195  Q
    ||||||| ||||| ||||||| ||||||  | |  |||| |||||||||| |   | ||||| ||| || |||||||||||||||||| ||||||    
T  6570304 gattgcctaaaattgtgtcacaattggaccctcaaaaaaccatgctcacggccctgcaaaatcgtgacacggtccacaaatcgtgtcacgatttg 6570210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 47676507 - 47676642
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||||||| | || |||||||||    
T  47676507 aaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatc 47676606  T
Q  115 gtgtcacgattggaaaccctg-aaaaacatgctcac 149  Q
    |||||||||||||| |||||| |||| |||||||||    
T  47676607 gtgtcacgattggacaccctgcaaaaccatgctcac 47676642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 47674314 - 47674449
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||| ||| ||| ||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||||||| | || |||||||||    
T  47674314 aaatcgtgacacgtttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatc 47674413  T
Q  115 gtgtcacgattggaaaccctg-aaaaacatgctcac 149  Q
    |||||||||||||| |||||| |||| |||||||||    
T  47674414 gtgtcacgattggacaccctgcaaaaccatgctcac 47674449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 4178563 - 4178447
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| | || |||||||||||||||| |||| |||||||||||||||||    
T  4178563 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcctaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 4178464  T
Q  123 attggaaaccctgaaaa 139  Q
    ||||||  |||||||||    
T  4178463 attggacgccctgaaaa 4178447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 14070203 - 14070339
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||||||| ||  |||| |||| |||| | | |||||||||||| | || |||||||    
T  14070203 caaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaa 14070302  T
Q  113 tcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    |||||||||||||| | |||||||||| |||||||||    
T  14070303 tcgtgtcacgattgaacaccctgaaaaccatgctcac 14070339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 14380231 - 14380367
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||||||| ||  |||| |||| |||| | | |||||||||||| | || |||||||    
T  14380231 caaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcttgaaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaa 14380330  T
Q  113 tcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    |||||||||||||| | |||||||||| |||||||||    
T  14380331 tcgtgtcacgattgaacaccctgaaaaccatgctcac 14380367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 23554828 - 23554712
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||| | |||| |||| | | |||||||||||| | || |||||||||||||||||    
T  23554828 cacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacg 23554729  T
Q  123 attggaaaccctgaaaa 139  Q
    |||||| ||||||||||    
T  23554728 attggacaccctgaaaa 23554712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 6360487 - 6360673
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    ||||||||||   ||||| |||||||| ||| ||| ||||||||||| |||||||||| |||||||| |||| |||| | || ||| ||||||||||||     
T  6360487 tgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacgaccaacattatcctgaaaacttgcccaacaagccgaaaatcgtgtcac 6360586  T
Q  101 gattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtca 188  Q
    | || |||||||||||||||| |||||  |||||| |||||| |||| |||||| | ||||||| | || | | ||||||||||||||    
T  6360587 gtttccccaaaatcgtgtcacaattgggcaccctgcaaaaca-gctctcgacattgcaaaattgcgacacgcttcacaaatcgtgtca 6360673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 27347715 - 27347594
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 119  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||| ||||| | || ||||||||||||||    
T  27347715 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtca-gttttcccaaaatcgtgtc 27347617  T
Q  120 acgattggaaaccctgaaaaaca 142  Q
    ||||||||  |||||| ||||||    
T  27347616 acgattgggcaccctgcaaaaca 27347594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 234 - 328
Target Start/End: Complemental strand, 48491177 - 48491083
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 328  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || |||||||| |  ||||||||||||||||||||| |||||||||||||||    
T  48491177 ttctccaccttgacttcaaattgatgatgatgccactttaaccatcaaccaccaattcccttttcttttcccttgcatccaactacaccaagtag 48491083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 19495759 - 19495642
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgcc-aaaaatcgtgtcatgattgcccaaaatcgtgtcac 121  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||| |||| ||| |||||||||| || | || |||||||| |||||||    
T  19495759 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaatcgtggcacgttttcccaaaattgtgtcac 19495660  T
Q  122 gattggaaaccctgaaaa 139  Q
    ||||||| ||||||||||    
T  19495659 gattggacaccctgaaaa 19495642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 32358431 - 32358559
Alignment:
Q  21 tgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtca 120  Q
    ||||||| ||| ||| ||||| ||||||||||| |||| |||||||| ||||||||| |||| ||  ||||| |||||| | || ||||||||||| |||    
T  32358431 tgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaacgtgcccagcaagctgaaaattgtgtcacgttttcccaaaatcgtatca 32358530  T
Q  121 cgattggaaaccctgaaaaacatgctcac 149  Q
    |||||||| |||||||||| |||||||||    
T  32358531 cgattggataccctgaaaaccatgctcac 32358559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 48489228 - 48489089
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||| ||| |||||||||| |||||||||||||||| || | |||| |||| |||||||| ||||||| | || ||| ||||    
T  48489228 caaatcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcctggaagcatgcccagcaagccaaaaaccgtgtcacgttttccctaaat 48489129  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacgacat 154  Q
    ||||||||| ||| | |||||| |||||| |||||||||||    
T  48489128 cgtgtcacggttgaacaccctgcaaaaca-gctcacgacat 48489089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 2647391 - 2647280
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| |||| |   |||||| ||||| | || ||||||||    
T  2647391 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcatgtcacgttttcccaaaat 2647292  T
Q  114 cgtgtcacgatt 125  Q
    |||| |||||||    
T  2647291 cgtgacacgatt 2647280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 4585959 - 4585824
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||| | ||| ||| |||||||||||||||||||||||||||  || |||| | || | || |||||||||| ||||| | || ||||||||    
T  4585959 caaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatattgaaaacttacccaacaagccaaaaatcttgtcacgttttcccaaaat 4585860  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
     |||||||||||||| |||||| |||||||||||||    
T  4585859 agtgtcacgattggacaccctgcaaaacatgctcac 4585824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 2389871 - 2389737
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||| ||  ||||| ||||||||||||||||||||||||| |||||| || |||| ||  ||||||||||||   || | |||||||    
T  2389871 aaatcgtgacacgtttggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgttcccagcaagctgaaaatcgtgtcacattttctcaaaatc 2389772  T
Q  115 gtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    |||||||||||||| ||||| |||| |||||||||    
T  2389771 gtgtcacgattggacaccctaaaaaccatgctcac 2389737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 43864058 - 43863945
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||||||| |||| ||| ||| ||||||||||||||||||||||||||||||| |||| | || | ||  || |||||||||||| | || |||||||||    
T  43864058 aaattgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaactttcctaacaaaccgaaaatcgtgtcacgttttcccaaaatc 43863959  T
Q  115 gtgtcacgattgga 128  Q
    ||||||||||||||    
T  43863958 gtgtcacgattgga 43863945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 33332157 - 33332032
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    |||||||||||  ||||| |||||||||||| ||| |||||||||||||||||||||||||||| || ||| ||||| |||| |   ||||||||||||     
T  33332157 tgtcacaattgtccaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaatgtgcccagcaagttgaaaatcgtgtcac 33332058  T
Q  101 gattgcccaaaatcgtgtcacgattg 126  Q
    | ||  ||||||||||| ||| ||||    
T  33332057 gtttttccaaaatcgtgacacaattg 33332032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 18126443 - 18126316
Alignment:
Q  13 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaa 112  Q
    |||||| |||||||| ||| ||| |||||||||||||||||||||| |||||||| |||| |||| | || ||| |||||||| ||| | ||  ||||||    
T  18126443 tcaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaacattatcctgaaaacttgcccaacaagccgaaaatcgtatcacgtttttccaaaa 18126344  T
Q  113 tcgtgtcacgattggaaaccctgaaaaac 141  Q
    ||||| |||||||||| |||||| |||||    
T  18126343 tcgtg-cacgattggacaccctgcaaaac 18126316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 4538921 - 4539032
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||| ||||||||||||||||||| ||||| |||| |||  ||||  || |||||||||||| | || ||||||||    
T  4538921 caaatcgtgacacgtttggtgcgtacgatccaaggtacgaccaaccttgtcctgaaaacttgcttagcaaaccgaaaatcgtgtcacgttttcccaaaat 4539020  T
Q  114 cgtgtcacgatt 125  Q
    ||||||||||||    
T  4539021 cgtgtcacgatt 4539032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 26417124 - 26416997
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    |||||| ||||| ||||| |||||||| ||| ||| |||||||||||||||||||||||||| |||| |||| || | | ||  | |||||||||||||     
T  26417124 tgtcacgattggccaaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttaccctgaaaacttgtccaacaaactaaaaatcgtgtcac 26417025  T
Q  101 gattgcccaaaatcgtgtcacgattgga 128  Q
      || |||||||||||||||| ||||||    
T  26417024 atttccccaaaatcgtgtcacaattgga 26416997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 4509388 - 4509474
Alignment:
Q  209 tcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 295  Q
    ||||||||||| ||| |  ||||| ||||||||||||||||||||||||||||||||  | |||||| || ||||||||||||||||    
T  4509388 tcatttttgagccacatctcaacaattctccaccttgactctaaaatgatgatgatgttaatttaaccatcaaccaccattctcctt 4509474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 4511230 - 4511316
Alignment:
Q  209 tcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 295  Q
    ||||||||||| ||| |  ||||| ||||||||||||||||||||||||||||||||  | |||||| || ||||||||||||||||    
T  4511230 tcatttttgagccacatctcaacaattctccaccttgactctaaaatgatgatgatgttaatttaaccatcaaccaccattctcctt 4511316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 6431448 - 6431362
Alignment:
Q  209 tcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 295  Q
    ||||||||||| ||| |  ||||| ||||||||||||||||||||||||||||||| | | |||||| || ||||||||||||||||    
T  6431448 tcatttttgagccacatctcaacaattctccaccttgactctaaaatgatgatgatactaatttaaccatcaaccaccattctcctt 6431362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 328
Target Start/End: Original strand, 47674529 - 47674628
Alignment:
Q  228 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagta 327  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||| |  |||||| | |   |||||||||| ||||||||| ||||||||||||||    
T  47674529 caacatttctccaccttgacttcaaattgatgatgatgccactttaaccaccaaccactaattatcttttctttt-ccttgcatccaactacaccaagta 47674627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 2761672 - 2761763
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||| ||||||||| |||| |||| |||| ||  |||||||||||| |||||    
T  2761672 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctgaaaacttgcccagcaagctgaaaatcgtgtcacgattg 2761763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 46516002 - 46515911
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    ||||| |||||| | ||| |||||||||||||||||  |||||||||||||||| ||||||||| | || ||||||||||||| || |||||    
T  46516002 caaatcgtgacatgcttggtgcatacgacccaaggtgtgaccaaccttatcctgaaaacgtgcccaacaagccaaaaatcgtgacacgattg 46515911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 24515140 - 24515222
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| ||||||||| |||||| |||||    
T  24515140 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaattgtgtcacgattg 24515222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 1113448 - 1113363
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||  |||| | || ||| |||||||||||| |||||    
T  1113448 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgcccatcaggccgaaaatcgtgtcacgattg 1113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 30026393 - 30026481
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 126  Q
    |||||| |||||||||||||||||||||||| |||||||||  ||| ||  |||||||||||| | || ||||||||| |||||||||||    
T  30026393 tacgactcaaggtacgaccaaccttatcctg-aaacgtgcccggcaagctgaaaatcgtgtcacgtttccccaaaatcatgtcacgattg 30026481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 21983645 - 21983705
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||| ||||||| |||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  21983645 caaatcgtgacacaattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 21983705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 35853701 - 35853626
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtc 98  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||  |||| |||| |||| |||||||||||||||    
T  35853701 cacgattgatgcgtacgatccaaggtacgaccgaccttatcctgaaaaacttgcccagcaagccaaaaatcgtgtc 35853626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 48491376 - 48491285
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    ||||| |||||||| ||| ||| |||||||||||||||||||||||| ||| || || |||||| | || ||| |||||||||||| |||||    
T  48491376 caaatcgtgacacggttggtgcgtacgacccaaggtacgaccaacctaatcttgaaagcgtgcccaacaagccgaaaatcgtgtcacgattg 48491285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 44847820 - 44847762
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  44847820 caaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 44847762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 49092092 - 49092230
Alignment:
Q  13 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg-taaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaa 110  Q
    |||||| ||| ||| |||| ||||||||| |||||||||||||||||||||||||  |||||| || |||| |  | ||||||||||||   || |||||    
T  49092092 tcaaatcgtgtcactattggtgcatacgatccaaggtacgaccaaccttatcctgaaaaacgtacccagcaagttcgaaaatcgtgtcacattttcccaa 49092191  T
Q  111 aatcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    ||||||| ||||||||   |||||| ||| |||||||||    
T  49092192 aatcgtgacacgattgagcaccctgcaaaccatgctcac 49092230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 496365 - 496446
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtg 96  Q
    |||| |||||||| ||||||| |||||| |||||||   |||||||||||||| ||| ||| ||||||||||||||| ||||    
T  496365 aaatcgtgacacggttgatgcgtacgactcaaggtaaatccaaccttatcctgaaaatgtgtcaagcatgccaaaaaccgtg 496446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 2479751 - 2479796
Alignment:
Q  27 gattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  2479751 gattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 2479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 275
Target Start/End: Original strand, 44011265 - 44011330
Alignment:
Q  210 catttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaac 275  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||  |||||||| || ||||||    
T  44011265 catttttgagtcacttttcaataattctccaccttgactctaaaatagtgatgatgtcaatttaac 44011330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 3050523 - 3050603
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 104  Q
    |||||||||||| |||||||||||||||||||||  |||||| | ||  ||| || || ||||| ||||||||||||||||    
T  3050523 cacgattgatgcgtacgacccaaggtacgaccaatattatccagaaatagtgtcatgcctgccacaaatcgtgtcatgatt 3050603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 4796362 - 4796251
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    ||||||||| ||  ||| ||| ||||| ||||||||||||||||  ||||||| ||||||||| | || |   |||||||||||| | ||  ||||||||    
T  4796362 aaattgtgatacatttggtgcgtacgatccaaggtacgaccaactctatcctgaaaacgtgcccatcaagttgaaaatcgtgtcacgtttttccaaaatc 4796263  T
Q  115 gtgtcacgattg 126  Q
    ||||||||||||    
T  4796262 gtgtcacgattg 4796251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 21989317 - 21989370
Alignment:
Q  21 tgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||||||||| ||| || |||||||||||||| ||||||||||||| ||||||    
T  21989317 tgacacgattgctgcgtatgacccaaggtacgatcaaccttatcctgaaaacgt 21989370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 6592917 - 6592976
Alignment:
Q  228 caacatttctccaccttgac-tctaaaatgatgatgatgccactttaacaatgaaccacc 286  Q
    |||||||||||||||||||| |||||  || |||||||||||||||||| || |||||||    
T  6592917 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 6592976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 18390558 - 18390617
Alignment:
Q  228 caacatttctccaccttgac-tctaaaatgatgatgatgccactttaacaatgaaccacc 286  Q
    |||||||||||||||||||| |||||  || |||||||||||||||||| || |||||||    
T  18390558 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 18390617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 286
Target Start/End: Original strand, 4175357 - 4175435
Alignment:
Q  208 atcatttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccacc 286  Q
    |||| |||||||||| ||  ||||||||||||||  ||||| |||||| ||||||||| || |||||| || |||||||    
T  4175357 atcaattttgagtcaattatcaacatttctccacaatgactttaaaataatgatgatgtcaatttaaccattaaccacc 4175435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 47264045 - 47264103
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| || ||||||| | ||||||||||| ||||||||||||||||||| ||||    
T  47264045 caaatcgtgtcaagattgatacgtacgacccaagatacgaccaaccttatcctgaaaac 47264103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 79792 - 79845
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||| |||||  ||||| |||||| ||||||| ||||||||||||||||||||    
T  79792 caaatcgtgacgtgattggtgcatatgacccaatgtacgaccaaccttatcctg 79845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 25767399 - 25767436
Alignment:
Q  88 aaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 125  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  25767399 aaaatcgtgtcacgatttcccaaaatcgtgtcacgatt 25767436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 26214672 - 26214631
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaac 275  Q
    |||||||||||||||||||| |||| ||||||||| ||||||    
T  26214672 ttctccaccttgactctaaattgataatgatgccaatttaac 26214631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 48491302 - 48491258
Alignment:
Q  109 aaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 154  Q
    |||||||||||||||||||| |||||| |||||| |||||||||||    
T  48491302 aaaatcgtgtcacgattggacaccctgcaaaaca-gctcacgacat 48491258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 48599940 - 48600044
Alignment:
Q  88 aaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtc 187  Q
    |||||||||||| | || |||| ||||||||||||||||   |||||| |||||| |||| |||||| | ||||| ||| || | | |||||||||||||    
T  48599940 aaaatcgtgtcacgtttccccataatcgtgtcacgattgtgcaccctgcaaaaca-gctctcgacattgcaaaatcgtgacacgcttcacaaatcgtgtc 48600038  T
Q  188 atgatt 193  Q
    | ||||    
T  48600039 acgatt 48600044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 2761746 - 2761829
Alignment:
Q  109 aaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
    |||||||||||||||||||  |||||| |||||| |||| |||||| | ||||| ||| |||| | ||||||||| |||| ||||    
T  2761746 aaaatcgtgtcacgattgggcaccctgcaaaaca-gctctcgacattgcaaaatcgtgacatgcttcacaaatcgggtcacgatt 2761829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 9189503 - 9189443
Alignment:
Q  228 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccat 288  Q
    |||||||||||||||||||||   || ||||||||||| || |||||| || |||||||||    
T  9189503 caacatttctccaccttgacttctaattgatgatgatgtcagtttaaccatcaaccaccat 9189443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 36318377 - 36318559
Alignment:
Q  12 gtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgccc-aa 110  Q
    |||||||||||||||| ||| ||| |||||  |||||||||||||||||||||||| ||||||| | |||| ||| |||||||||||| | || ||| ||    
T  36318377 gtcaaattgtgacacggttggtgcgtacgattcaaggtacgaccaaccttatcctgaaaacgtggccagcaagccgaaaatcgtgtcacgtttccccaaa 36318476  T
Q  111 aatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
    |||||||||||||||||| |||||| ||||||||||| |||||| |  |||| ||| || | | |||||||||||||| ||||    
T  36318477 aatcgtgtcacgattggacaccctgcaaaacatgctctcgacattgcgaaatcgtgacacgtttcacaaatcgtgtcacgatt 36318559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 20522625 - 20522752
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| |||| |   |||||||||||| | || | ||||||    
T  20522625 caaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaat 20522724  T
Q  114 cgtgtcacgattggaaaccctgaaaaac 141  Q
    |||| ||||||||   ||||||||||||    
T  20522725 cgtgacacgattgagcaccctgaaaaac 20522752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 34389253 - 34389379
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||| || |||| |    |||||||||||| | || |||||||    
T  34389253 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaa 34389352  T
Q  113 tcgtgtcacgattggaaaccctgaaaa 139  Q
    |||||||||||||||| ||||||||||    
T  34389353 tcgtgtcacgattggacaccctgaaaa 34389379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 40015314 - 40015420
Alignment:
Q  19 tgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgt 118  Q
    |||| |||||||||||| ||||| |||||||||||||||| ||||| || ||||||| ||| ||||||||||||||||||| |||||| ||||||  |||    
T  40015314 tgtgtcacgattgatgcttacgatccaaggtacgaccaacattatcatgaaaacgtgtcaatcatgccaaaaatcgtgtcacgattgctcaaaattatgt 40015413  T
Q  119 cacgatt 125  Q
    |||||||    
T  40015414 cacgatt 40015420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 2837221 - 2837341
Alignment:
Q  21 tgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtca 120  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| | || |||| |   |||||||||||| | || |||||||||||||||    
T  2837221 tgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttacccagcaaggtgaaaatcgtgtcacgttttcccaaaatcgtgtca 2837320  T
Q  121 cgattggaaaccctgaaaaac 141  Q
    |||||||| |||||| |||||    
T  2837321 cgattggacaccctgcaaaac 2837341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 36988459 - 36988571
Alignment:
Q  28 attgatgcatacgacccaaggtacgaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 126  Q
    |||||||| |||||||||||||||||||||||||||||||  |||| |||| |||| | | |||||||||||| | || ||||||||| |||||||||||    
T  36988459 attgatgcgtacgacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcatgtcacgattg 36988558  T
Q  127 gaaaccctgaaaa 139  Q
    || ||||||||||    
T  36988559 gacaccctgaaaa 36988571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 45099543 - 45099427
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| |||||  |||||||||||||||||||||||| ||| | |||| |||| ||||||||||||||||  ||| |||||||| ||||||||    
T  45099543 cacgattgatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacaatttcccaaaattgtgtcacg 45099444  T
Q  123 attggaaaccctgaaaa 139  Q
    |||||| ||||| ||||    
T  45099443 attggacaccctaaaaa 45099427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 21630348 - 21630460
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||  |||||||||| |||||||||||||||||||| ||||||||| |||| |   |||||||||||||| || ||||||||    
T  21630348 caaatcgtgacacgattggtgtgtacgacccaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcatgttttcccaaaat 21630447  T
Q  114 cgtgtcacgattg 126  Q
     ||| ||||||||    
T  21630448 tgtgacacgattg 21630460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 2334787 - 2334879
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    ||||| ||| |||||||||||  ||||||||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  2334787 caaatcgtgtcacgattgatgtgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 2334879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 5723634 - 5723716
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | || | |||| |||||||||||||||| |||||    
T  5723634 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgtccagcaagccaaaaatcgtgtcacgattg 5723716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 33528318 - 33528182
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||||||| ||| ||||||||||||||||| ||||||||| ||| |||||| || |||| |    |||||||||||| | || |||||||    
T  33528318 caaatcgtgacacgattggtgcgtacgacccaaggtacgatcaaccttattctgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttcccaaaa 33528219  T
Q  113 tcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    ||||| ||||||||   |||||| ||| |||||||||    
T  33528218 tcgtgacacgattgagcaccctgcaaaccatgctcac 33528182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 39483279 - 39483407
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||||||| ||| || |||||||||||||||||||||||||||| |||||| || | || |    |||||||||||| | || |||||||    
T  39483279 caaatcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaa 39483378  T
Q  113 tcgtgtcacgattggaaaccctgaaaaac 141  Q
    ||||| ||||||||   ||||||||||||    
T  39483379 tcgtgacacgattgagcaccctgaaaaac 39483407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 4503516 - 4503594
Alignment:
Q  28 attgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  4503516 attgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 4503594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 28258872 - 28258814
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  28258872 caaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 28258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 6595398 - 6595490
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgt-gccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 139  Q
    ||||||| |||||||||||| |||  | ||| |||| |||||||||||||||| | || |||||||| |||||||||||||| ||||||||||    
T  6595398 gtacgactaaccttatcctgaaaatctagcccagcaagccaaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacaccctgaaaa 6595490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 17865589 - 17865640
Alignment:
Q  23 acacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  17865589 acacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 17865640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 33118538 - 33118665
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||| |||||||||||||||| ||||||||||| || ||| ||||| |||| |   ||||| |||||| | || || ||||     
T  33118538 caaatcgtgacacgattggtgcgtacgacccaaggtacggccaaccttatcttgaaaatgtgcccagcaagttgaaaattgtgtcacgttttcctaaaaa 33118637  T
Q  114 cgtgtcacgattggaaaccctgaaaaac 141  Q
    |||| ||||||||   ||||||||||||    
T  33118638 cgtgacacgattgagcaccctgaaaaac 33118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 39284661 - 39284574
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg 135  Q
    |||||||||||||||||||| |||| | || |||| ||| ||||| |||||| | || ||||||||||||||||||| ||| ||||||    
T  39284661 gtacgaccaaccttatcctgaaaactttcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgataggacaccctg 39284574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 45726530 - 45726469
Alignment:
Q  88 aaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    ||||||||||||   ||||||||||||||||||| |||||| |||||||||| |||||||||    
T  45726530 aaaatcgtgtcacatttgcccaaaatcgtgtcacaattggacaccctgaaaatcatgctcac 45726469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 14698680 - 14698600
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtg 117  Q
    ||||||||||||||||||||||||||||||| ||| ||||| | || |   |||||||||||| | || ||||||||||||    
T  14698680 tacgacccaaggtacgaccaaccttatcctgaaaatgtgcccaacaagttgaaaatcgtgtcacgttttcccaaaatcgtg 14698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 149
Target Start/End: Complemental strand, 17863955 - 17863855
Alignment:
Q  50 acgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctca 148  Q
    |||||||||||||||||  ||| | |||| |||| |  ||||||||||||| | || ||||||||  ||||||||||||| |||||||||| ||||||||    
T  17863955 acgaccaaccttatcctcaaaaacttgcccagcaagtaaaaaatcgtgtcacgttttcccaaaattatgtcacgattggacaccctgaaaaccatgctca 17863856  T
Q  149 c 149  Q
    |    
T  17863855 c 17863855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 23078166 - 23078106
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||| ||| |||||||| ||| ||||||||||| ||||||||||||||||||| ||||||    
T  23078166 caaatcgtggcacgattggtgcgtacgacccaagatacgaccaaccttatcctgaaaacgt 23078106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 29867644 - 29867552
Alignment:
Q  48 gtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 139  Q
    |||| |||||||||||| || ||| | |||| |||| | | |||||||||||| | || ||||||||||||||||||||||| ||||||||||    
T  29867644 gtacaaccaaccttatcttgaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgaaaa 29867552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 35447477 - 35447606
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 119  Q
    |||||||| ||| ||| ||||||||||||||||| |||||||||| || |||| ||||   ||  || | ||||||||||   || |||||||||||||     
T  35447477 gtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatcttgaaaacttgcccgacaaaccgataatcgtgtcacattttcccaaaatcgtgtt 35447576  T
Q  120 acgattggaaaccctgaaaaacatgctcac 149  Q
    || |||| | ||||||||||  ||||||||    
T  35447577 acaattgaacaccctgaaaacaatgctcac 35447606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 36206049 - 36206126
Alignment:
Q  28 attgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgatt 104  Q
    |||||||| ||| | ||||||||||||||||||||||||| ||| | | || |||| |||||||||||||||| ||||    
T  36206049 attgatgcgtacaatccaaggtacgaccaaccttatcctgaaaatctttcccagcaagccaaaaatcgtgtcacgatt 36206126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 31056675 - 31056751
Alignment:
Q  215 ttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct 291  Q
    |||||||| ||| |||||||||||||||||||||||||| || || ||||| || |||||  || ||||||| ||||    
T  31056675 ttgagtcaattttcaacatttctccaccttgactctaaattggtggtgatgtcaatttaatcatcaaccacctttct 31056751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 403
Target Start/End: Original strand, 34907585 - 34907627
Alignment:
Q  360 tgttaaaaaatgttgggataatttattttgtcacttgatgatgt 403  Q
    ||||||||||||||||||||||||| || |||||||||||||||    
T  34907585 tgttaaaaaatgttgggataattta-ttagtcacttgatgatgt 34907627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 8389836 - 8389790
Alignment:
Q  21 tgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||| ||||| ||| |||||||||||||||| ||||||||||||||    
T  8389836 tgacatgattggtgcgtacgacccaaggtacgtccaaccttatcctg 8389790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 10706937 - 10706895
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcct 66  Q
    |||||||| ||  ||||||||||||||||||||||||||||||    
T  10706937 cacgattggtgtgtacgacccaaggtacgaccaaccttatcct 10706895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 13569733 - 13569785
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||| |||||||||||| ||| ||||| ||||||||||| |||||||||||||    
T  13569733 caaatcgtgacacgattggtgcttacgatccaaggtacga-caaccttatcctg 13569785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 9183381 - 9183505
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||| |||| |||| | |||||||||||||| | || |||||||||    
T  9183381 aaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagtcaaaaatcgtgtcacgttttcccaaaatc 9183480  T
Q  115 gtgtcacgattggaaaccctgaaaa 139  Q
    |||||||||||||| ||||| ||||    
T  9183481 gtgtcacgattggacaccctaaaaa 9183505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 21272696 - 21272563
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    |||||| ||||| |||||  ||||||| ||| ||| ||||| |||||||| |||||||||||||||| ||||||||||| |||| ||||||||||| ||     
T  21272696 tgtcacgattggccaaatcttgacacggttggtgcgtacgatccaaggtatgaccaaccttatcctgaaaacgtgccaaacatgtcaaaaatcgtgacac 21272597  T
Q  101 gattgcccaaaatcgtgtcacgattggaaaccct 134  Q
    |||| ||||||||||||||||||||||| |||||    
T  21272596 gattacccaaaatcgtgtcacgattggacaccct 21272563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 21593222 - 21593111
Alignment:
Q  38 acgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaa 137  Q
    |||||||||||||||||||||||||||||  |||| |||| |||| ||| |||||||||||| | || |||||||| |||||||||||||| ||||||||    
T  21593222 acgacccaaggtacgaccaaccttatcctaaaaacatgcccagcaagccgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacaccctgaa 21593123  T
Q  138 aaacatgctcac 149  Q
    || |||||||||    
T  21593122 aaccatgctcac 21593111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 26954674 - 26954755
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtg 96  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  26954674 aaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgtcaagcatgccaaaaatcgtg 26954755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 5407288 - 5407404
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||| | |||| |||| ||||||||  |||||| ||||  ||||||||||||||||    
T  5407288 cacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacg 5407387  T
Q  123 attggaaaccctgaaaa 139  Q
    |||||| || |||||||    
T  5407388 attggacactctgaaaa 5407404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 5411613 - 5411729
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||| | |||| |||| ||||||||  |||||| ||||  ||||||||||||||||    
T  5411613 cacgattgatgcgtacgacccaaggtacgaccaaccttatcttgaaaatcttgcccagcaagccaaaaaatgtgtcacgattttccaaaatcgtgtcacg 5411712  T
Q  123 attggaaaccctgaaaa 139  Q
    |||||| || |||||||    
T  5411713 attggacactctgaaaa 5411729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 22964101 - 22964229
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    |||||||||||||| |||  || |||||  |||||||||||||||||||||||| |||| || | |||| |||||||||||||||| | || ||||||||    
T  22964101 caaattgtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaatcgtgtcacgttttcccaaaat 22964200  T
Q  114 cgtgtcacgattggaaaccctgaaaaaca 142  Q
    ||| ||||||||| | |||||| ||||||    
T  22964201 cgtatcacgattgaacaccctgcaaaaca 22964229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 23824292 - 23824164
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    |||||||||||||| |||  || |||||  |||||||||||||||||||||||| |||| || | |||| |||||||||||||||| | || ||||||||    
T  23824292 caaattgtgacacgtttggcgcgtacgatacaaggtacgaccaaccttatcctgaaaacttgtccagcaagccaaaaatcgtgtcacgttttcccaaaat 23824193  T
Q  114 cgtgtcacgattggaaaccctgaaaaaca 142  Q
    ||| ||||||||| | |||||| ||||||    
T  23824192 cgtatcacgattgaacaccctgcaaaaca 23824164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 5406750 - 5406843
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaagt 326  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || |||||||| ||| |||||||||||| |||||||| |||||||||||||    
T  5406750 ttctccaccttgacttgaaattgatgatgatgccactttaaccatcaaccaccaatctcccttttcttttcgcttgcatccaactacaccaagt 5406843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 5411075 - 5411168
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaagt 326  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || |||||||| ||| |||||||||||| |||||||| |||||||||||||    
T  5411075 ttctccaccttgacttgaaattgatgatgatgccactttaaccatcaaccaccaatctcccttttcttttcgcttgcatccaactacaccaagt 5411168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 24435679 - 24435555
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    |||||| ||||| ||||| |||||||| ||| ||| ||| ||||||||||||||||||||||||||| ||||||||||| || |   ||||||||||||     
T  24435679 tgtcacgattggccaaatcgtgacacggttggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgccaaacaagttgaaaatcgtgtcac 24435580  T
Q  101 gattgcccaaaatcgtgtcacgatt 125  Q
    | || ||||||||| || |||||||    
T  24435579 gttttcccaaaatcatgacacgatt 24435555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 5413828 - 5413910
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  5413828 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 5413910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 5407518 - 5407611
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaagt 326  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || | |||||| | ||| ||||||||||||||||||| |||||||||||||    
T  5407518 ttctccaccttgacttcaaattgatgatgatgccactttaaccatcatccaccaatatcccttttcttttcccttgcatccaactacaccaagt 5407611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 5411843 - 5411936
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaagt 326  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || | |||||| | ||| ||||||||||||||||||| |||||||||||||    
T  5411843 ttctccaccttgacttcaaattgatgatgatgccactttaaccatcatccaccaatatcccttttcttttcccttgcatccaactacaccaagt 5411936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 10076885 - 10076757
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    |||| |  ||||||||| ||| | || ||||||||    
T  10076885 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtaatcagcaagttaaaaatcgtatcacgttttcccaaaat 10076786  T
Q  114 cgtgtcacgattggaaaccctgaaaaaca 142  Q
    ||| ||| ||||||  |||||| ||||||    
T  10076785 cgtatcatgattgggcaccctgcaaaaca 10076757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 31979920 - 31980056
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||| |||||| ||| |||||||||||||||||||| ||||||||| |||| |   ||||| |||||| | ||  |||||||    
T  31979920 caaatcgtgacacgattggtgcgtacgactcaaagtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaattgtgtcacgtttttccaaaat 31980019  T
Q  114 cgtgtcacgattggaaaccctgaaaaa-catgctcac 149  Q
    |||| ||||||||   ||||||||||| |||||||||    
T  31980020 cgtgacacgattgatcaccctgaaaaaccatgctcac 31980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 603613 - 603719
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 119  Q
    |||||||| ||| ||| ||||| ||||| ||||| ||||||||||||| |||| |||| |||| ||| |||||| ||||| | || ||||||||||||||    
T  603613 gtgacacgtttggtgcgtacgatccaagatacgatcaaccttatcctgaaaacttgcccagcaagccgaaaatcatgtcacgttttcccaaaatcgtgtc 603712  T
Q  120 acgattg 126  Q
    |||||||    
T  603713 acgattg 603719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 5406578 - 5406660
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||| | |||| |||| |||||||||||||||| |||||    
T  5406578 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 5406660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 5410903 - 5410985
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||| | |||| |||| |||||||||||||||| |||||    
T  5410903 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 5410985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 16452820 - 16452902
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | | || |||| |||||||||||||||| |||||    
T  16452820 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatctttcccagcaagccaaaaatcgtgtcacgattg 16452902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 30834917 - 30834999
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  30834917 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 30834999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 33160734 - 33160816
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  33160734 cacgattgatgcgtacgacccaatgtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 33160816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 3809320 - 3809407
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgg 127  Q
    ||||||||||||||||||||||||||||||| |||| | ||   || ||| |||||||||||| | || ||||||||||||||||||||||    
T  3809320 tacgacccaaggtacgaccaaccttatcctgaaaactttcc---caagccgaaaatcgtgtcacgtttccccaaaatcgtgtcacgattgg 3809407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 16554458 - 16554358
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaag 325  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||| ||||  ||||||    
T  16554458 caacatttctccaccttgacttctaatttggcgatgatgccactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactctaccaag 16554359  T
Q  326 t 326  Q
    |    
T  16554358 t 16554358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 16631014 - 16630914
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaag 325  Q
    ||||||||||||||||||||| ||||  ||  ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||| ||||  ||||||    
T  16631014 caacatttctccaccttgacttctaatttggcgatgatgccactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactctaccaag 16630915  T
Q  326 t 326  Q
    |    
T  16630914 t 16630914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 16652720 - 16652620
Alignment:
Q  228 caacatttctccaccttgactctaaaat-gatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaag 325  Q
    |||||||||||||||||||||  ||| | | |||||||||||||||||| || |||||||| ||| ||||||||||||||||||||| ||||  ||||||    
T  16652720 caacatttctccaccttgacttcaaatttggtgatgatgccactttaaccatcaaccaccaatctcccttttcttttcccttgcatccaactctaccaag 16652621  T
Q  326 t 326  Q
    |    
T  16652620 t 16652620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 18234486 - 18234546
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  18234486 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 18234546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 5571957 - 5571846
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| ||| |||||||| ||| |||||||||||||||||||||||||| |||  ||||||||| |||| |   |||||||||||| | || | |||||||    
T  5571957 aaatcgtgtcacgattggtgcgtacgacccaaggtacgaccaaccttaacctaaaaacgtgcccagcaagttgaaaatcgtgtcacgttttctcaaaatc 5571858  T
Q  115 gtgtcacgattg 126  Q
    ||| ||||||||    
T  5571857 gtgacacgattg 5571846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 5017191 - 5017137
Alignment:
Q  13 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    |||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5017191 tcaaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctg 5017137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 31086167 - 31086114
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  31086167 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctg 31086114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 5757173 - 5757115
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  5757173 caaatcgtgccacgattgatacatacgaccaaaggtacgaccaaccttatcctgaaaac 5757115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 26661506 - 26661421
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    ||||||||||||||||||||||||||||||| ||||| | | |||| | | |||||| |||||   || |||||||||||||||||    
T  26661506 tacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcacg 26661421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Complemental strand, 26767477 - 26767392
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    ||||||||||||||||||||||||||||||| ||||| | | |||| | | |||||| |||||   || |||||||||||||||||    
T  26767477 tacgacccaaggtacgaccaaccttatcctgaaaacgagtccagcaagtcgaaaatcttgtcacattttcccaaaatcgtgtcacg 26767392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 403
Target Start/End: Original strand, 3050865 - 3050905
Alignment:
Q  363 taaaaaatgttgggataatttattttgtcacttgatgatgt 403  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  3050865 taaaaaatgttgggataatttatttagtcacttgatgatgt 3050905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 16452712 - 16452752
Alignment:
Q  27 gattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  16452712 gattgatgcgtacgacccaaggtacgaccaaccttatcctg 16452752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 31405054 - 31405097
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    |||||||||||| ||||||| |||||||||||||||||||||||    
T  31405054 cacgattgatgcgtacgacctaaggtacgaccaaccttatcctg 31405097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 193
Target Start/End: Complemental strand, 17759494 - 17759357
Alignment:
Q  55 caaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 154  Q
    ||||||||||||| |||| || | |||| ||| ||||| |||||| | || ||||||||||||||||| ||||  ||||| ||| |||  ||| ||||||    
T  17759494 caaccttatcctgaaaacttgtccagcaagccgaaaattgtgtcacgtttccccaaaatcgtgtcacggttgggcaccctaaaataca-actctcgacat 17759396  T
Q  155 aggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
     | ||||||||| || | | |||||||||||||| ||||    
T  17759395 tgcaaaattgtgacacgcttcacaaatcgtgtcacgatt 17759357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 23896736 - 23896793
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    |||| ||| |||||||||| | ||||||| ||||||||||||||||||||||| ||||    
T  23896736 aaatcgtgccacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaac 23896793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 34166670 - 34166584
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 317  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  34166670 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 34166584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 24543165 - 24543205
Alignment:
Q  213 ttttgagtcactttgcaacatttctccaccttgactctaaa 253  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  24543165 ttttgagtcactttctaacatttctccaccttgactctaaa 24543205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 29812861 - 29812725
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| | |||||||||||||| | || ||||||||    
T  29812861 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagacaaaaatcgtgtcacgttttcccaaaat 29812762  T
Q  114 cgtgtcacgattggaaaccctg-aaaaacatgctcac 149  Q
    ||||||||||||||| |||||| |||| |||||||||    
T  29812761 cgtgtcacgattggacaccctgcaaaaccatgctcac 29812725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 37 - 328
Target Start/End: Complemental strand, 44331344 - 44331052
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctga 136  Q
    ||||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||||||   || ||||||||||||||||||||| | |||| |     
T  44331344 tacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagccaaaaatcgtgtcactttttcccaaaatcgtgtcacgattgaacacccagc 44331245  T
Q  137 aaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatttgtaacatgctc--aaatcatttttg-agtcactttgcaacat 233  Q
    ||||||| ||||| |||| |  |||| ||| || |||   |||| ||||||| ||||  | || | |||  || ||| ||| | || || |   || ||     
T  44331244 aaaacatactcacaacattgcgaaatcgtgacacggttgccaaagcgtgtcacgattcttcactttctccaaactcaatttagaaggca-taaacagca- 44331147  T
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 328  Q
    |||||||||||||||  ||| ||||||||||| ||||||||| || |||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  44331146 ttctccaccttgacttcaaattgatgatgatgtcactttaaccatcaaccaccaatctccttttcttttcccttgtatccaactacaccaagtag 44331052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 49200040 - 49200175
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||  ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||||||| | || ||||| |||    
T  49200040 aaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagcaagccgaaaatcgtgtcacgtttccccaacatc 49200139  T
Q  115 gtgtcacgattggaaaccctgaaaaacatgctcacg 150  Q
    |||||||||||||| |||||| ||||||||||||||    
T  49200140 gtgtcacgattggacaccctgcaaaacatgctcacg 49200175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 4569525 - 4569400
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 119  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||||||| | || ||||||||| ||||    
T  4569525 gtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcacgttttcccaaaatcatgtc 4569426  T
Q  120 acgattggaaaccctgaaaaacatgc 145  Q
    ||||||||| ||||| |||| |||||    
T  4569425 acgattggacaccctaaaaaccatgc 4569400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 46173307 - 46173179
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtc 119  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||| | || |||   |||||||||||| || ||||||||||||||    
T  46173307 gtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccaacaagcc-ggaatcgtgtcatgttttcccaaaatcgtgtc 46173209  T
Q  120 acgattggaaaccctgaaaaacatgctcac 149  Q
    ||||||||| |||||| ||| |||||||||    
T  46173208 acgattggacaccctgcaaaccatgctcac 46173179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 7762052 - 7761937
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| | || |||||||||||||||||    
T  7762052 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacg-tttcccaaaatcgtgtcacg 7761954  T
Q  123 attggaaaccctgaaaa 139  Q
    ||||||  |||||||||    
T  7761953 attggacgccctgaaaa 7761937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 31340631 - 31340766
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatg-attgcccaaaat 113  Q
    |||| ||| |||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| | || ||| ||||||||||||||  || ||||||||    
T  31340631 aaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcatgtttttcccaaaat 31340730  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    | ||||||||||||| |||||||||| |||||||||    
T  31340731 catgtcacgattggacaccctgaaaaccatgctcac 31340766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 7764240 - 7764124
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||| | |||| | || |||||||||||||||| | || |||||||||||||||||    
T  7764240 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctaaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacg 7764141  T
Q  123 attggaaaccctgaaaa 139  Q
    ||||||  |||||||||    
T  7764140 attggacgccctgaaaa 7764124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 9636508 - 9636624
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | || | | || ||||||||||||||||||||| ||||||||| |||||||    
T  9636508 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgtccatcaagccaaaaatcgtgtcatgatttcccaaaatcatgtcacg 9636607  T
Q  123 attggaaaccctgaaaa 139  Q
    ||||||  |||||||||    
T  9636608 attggacgccctgaaaa 9636624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 54593284 - 54593106
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| |||||||||| |||||||||||||||||||| ||||||||| |||| |   |||||||||||| | || ||||||||    
T  54593284 caaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgcccagcaagttgaaaatcgtgtcacgttttcccaaaat 54593185  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
     | |||||||||| | ||| |||||| |||||||||  | || |||||| ||| |||||| || ||||||| ||||||||    
T  54593184 tgagtcacgattgaataccatgaaaaccatgctcactgccta-gaaaatcgtgccatggttcataaatcgtatcatgatt 54593106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 55302553 - 55302687
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||| ||| | || ||| ||||    
T  55302553 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtatcacgttttccc-aaat 55302651  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    ||||||||||||| | ||||||||||  ||||||||    
T  55302652 cgtgtcacgattgaacaccctgaaaacaatgctcac 55302687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 34490811 - 34490634
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| |||| |||| |  | ||| |||||||||||| | ||  ||||||||    
T  34490811 aaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgcccaataagccgaaaatcgtgtcacgtttttccaaaatc 34490712  T
Q  115 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
    |||||||||||||| |||||| ||||||| ||| |||||| |  |||| ||| || |||   |||||||||||||||||    
T  34490711 gtgtcacgattggataccctgcaaaacat-ctctcgacattgcgaaatcgtgacacggttgccaaatcgtgtcatgatt 34490634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 43404321 - 43404433
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||| ||||||||||| |||| |||  |||| ||| |||||||||||| | || ||||||||    
T  43404321 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcctgaaaacttgctcagcaagccgaaaatcgtgtcacgtttccccaaaat 43404420  T
Q  114 cgtgtcacgattg 126  Q
    |||||||||||||    
T  43404421 cgtgtcacgattg 43404433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 45094952 - 45094836
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| ||||  ||||||||||||||||||||||||| ||| | |||| | || |||||||||||||||| |||| |||||||| ||||||||    
T  45094952 cacgattgatgcgtacgttccaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaattgtgtcacg 45094853  T
Q  123 attggaaaccctgaaaa 139  Q
    ||||||  |||||||||    
T  45094852 attggacgccctgaaaa 45094836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 5236827 - 5236941
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||| ||||||||| |||| | || |||| ||| |||||||||||| | || ||||||||    
T  5236827 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcctgaaaactttcccagcaagccgaaaatcgtgtcacgttttcccaaaat 5236926  T
Q  114 cgtgtcacgattgga 128  Q
     ||||||||||||||    
T  5236927 tgtgtcacgattgga 5236941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 5258531 - 5258629
Alignment:
Q  31 gatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattgga 128  Q
    ||||| |||||  |||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||| |||||||||||||||||||||||    
T  5258531 gatgcgtacgattcaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacgattgga 5258629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 43402365 - 43402490
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    ||||||||||   ||||| |||||||| ||| ||| ||||||||||| ||| ||||||||||||||| |||| |||| |||| ||| ||||||||||||     
T  43402365 tgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgtcac 43402464  T
Q  101 gattgcccaaaatcgtgtcacgattg 126  Q
    | ||  ||||||||||||||||||||    
T  43402465 gtttctccaaaatcgtgtcacgattg 43402490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 37 - 150
Target Start/End: Original strand, 44331840 - 44331953
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctga 136  Q
    |||||||||||||||||| ||| ||||| || |||||| || || | |||||||||||||||| | ||  |||||||||||||||||||||| ||||||     
T  44331840 tacgacccaaggtacgactaactttatcttgaaaacgtacccaggaagccaaaaatcgtgtcacgtttttccaaaatcgtgtcacgattggacaccctgc 44331939  T
Q  137 aaaacatgctcacg 150  Q
    ||||||| ||||||    
T  44331940 aaaacatactcacg 44331953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 29812645 - 29812547
Alignment:
Q  228 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagta 327  Q
    |||||||||||||||||||||  ||| ||||||||||| ||||||||| || |||||||| || ||||||||||| ||||||||| ||||||||||||||    
T  29812645 caacatttctccaccttgacttcaaattgatgatgatgtcactttaaccatcaaccaccaatc-ccttttctttt-ccttgcatccaactacaccaagta 29812548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 6096188 - 6096322
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||  ||| ||| ||||||||||||||||||||||||||||||| |||  || | |  | ||| |||||||||||| | || ||||||||    
T  6096188 caaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccaataagccgaaaatcgtgtcacgttttcccaaaat 6096287  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctca 148  Q
    |||||||| |||||| |||||| ||| ||||||||    
T  6096288 cgtgtcacaattggacaccctgcaaaccatgctca 6096322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 3393394 - 3393290
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||  ||||| || ||||||||||||| |||||||| ||| | |||| |||| |||||||||||||||| |||| |||||||||||||||||    
T  3393394 cacgattgatgtgtacgatcctaggtacgaccaac-ttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 3393296  T
Q  123 attgga 128  Q
    ||||||    
T  3393295 attgga 3393290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 7764034 - 7763935
Alignment:
Q  228 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttc-ttttcccttgcatctaactacaccaag 325  Q
    |||||||| ||||||||||||  ||| ||||||||||||||||||||| || |||||||| ||| ||||||| |||||||||||||| ||||||||||||    
T  7764034 caacattt-tccaccttgacttcaaattgatgatgatgccactttaaccatcaaccaccaatctcccttttctttttcccttgcatccaactacaccaag 7763936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 40592465 - 40592353
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||  ||||| ||||||||||||||||||||||||| ||||||| | |||| |   |||||||||||| | || ||||||||    
T  40592465 caaatcgtgacacgattggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgtgtccagcaagttgaaaatcgtgtcacgttttcccaaaat 40592366  T
Q  114 cgtgtcacgattg 126  Q
    |||| ||||||||    
T  40592365 cgtgacacgattg 40592353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 29810666 - 29810539
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||  || | |||| ||||||||| |||  | | ||  | |||||    
T  29810666 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaatttgtccagcaagccaaaaattgtgctacgtttttctaaaat 29810567  T
Q  114 cgtgtcacgattggaaaccctgaaaaac 141  Q
    ||||||||||||||| |||||| |||||    
T  29810566 cgtgtcacgattggacaccctgcaaaac 29810539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 9634892 - 9634985
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaagt 326  Q
    |||||||||||||||  ||| ||||||||||| ||||||||| || |||||||| ||| |||||||||||| |||||| | |||||||||||||    
T  9634892 ttctccaccttgacttcaaactgatgatgatgtcactttaaccatcaaccaccaatctcccttttcttttcacttgcacccaactacaccaagt 9634985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 8370173 - 8370037
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagc-atgccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||||||| ||| ||| ||||||||||||||||||||||||||  |||||| || ||| ||    |||||||||||| | || |||||||    
T  8370173 caaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaacgttcccagcaattttgaaaatcgtgtcacgttttcccaaaa 8370074  T
Q  113 tcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    ||||| ||||||||   |||||| ||| |||||||||    
T  8370073 tcgtgacacgattgagcaccctgcaaaccatgctcac 8370037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 21711604 - 21711740
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||| | |||||| |  |||| |    ||||| |||||| | || |||||||    
T  21711604 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatccggaaaacgtactcagcaagtttgaaaattgtgtcacgttttcccaaaa 21711703  T
Q  113 tcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    ||||| ||||||||   |||||||||| |||||||||    
T  21711704 tcgtgacacgattgagcaccctgaaaaccatgctcac 21711740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 324
Target Start/End: Complemental strand, 37408040 - 37407941
Alignment:
Q  228 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctc--cttttc-ttttcccttgcatctaactacaccaa 324  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||| || | ||| || ||||  |||||| |||||||||||||| |||||||||||    
T  37408040 caacatttctccaccttgacttcaaattgatgatgatgccactttaaccatcagccatcaatctcctcttttctttttcccttgcatccaactacaccaa 37407941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 328
Target Start/End: Original strand, 2075572 - 2075667
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttc-ttttcccttgcatctaactacaccaagtag 328  Q
    ||||||| |||||||||||| ||||| |||||| ||||||   || || |||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  2075572 ttctccatcttgactctaaattgatggtgatgctactttaggcatcaatcaccattccccttttcattttcccttgcttctaactacaccaagtag 2075667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 328
Target Start/End: Complemental strand, 40735005 - 40734911
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattc-tccttttcttttcccttgcatctaactacaccaagtag 328  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || || ||||| || || ||||||||||| ||||||| |||||||||||||||    
T  40735005 ttctccaccttgacttcaaattgatgatgatgccactttaaccatcaatcaccaatcctctttttcttttcc-ttgcatccaactacaccaagtag 40734911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 24694849 - 24694767
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtg 96  Q
    ||||| |||||||||||| ||| ||| ||||||||||||||||||||||||||| ||||||| | |||| |  ||||||||||    
T  24694849 caaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctgaaaacgtgtccagcaagttaaaaatcgtg 24694767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 36018408 - 36018330
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 126  Q
    |||||||||||||||||||  ||||||||| |||| ||| ||||| |||||| | || |||||||||||||||||||||    
T  36018408 gtacgaccaaccttatcctaaaaacgtgcccagcaagccgaaaattgtgtcacgttttcccaaaatcgtgtcacgattg 36018330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 36029502 - 36029556
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  36029502 gtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 36029556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 5258717 - 5258810
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaagt 326  Q
    |||||||||||||||  ||| ||||||||||| ||||||||| || |||||||| ||| ||||||||||||||||| ||  ||||| |||||||    
T  5258717 ttctccaccttgacttcaaattgatgatgatgtcactttaaccatcaaccaccaatctcccttttcttttcccttgaattcaactataccaagt 5258810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 40734296 - 40734243
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  40734296 caaatcgtgacacgattgatgcgtacgatccaaggtacgaccaaccttatcctg 40734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 47923587 - 47923534
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  47923587 caaatcgtgacacgattgatgcgtacaacccaaggtacgaccaaccttatcctg 47923534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 6718292 - 6718192
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctc-cttttcttttcccttgcatctaactacaccaag 325  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| |||| |  ||||||||||||||||| ||||  ||||||    
T  6718292 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatctcaccattcttttcccttgcatccaactctaccaag 6718193  T
Q  326 t 326  Q
    |    
T  6718192 t 6718192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 8127033 - 8127145
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||  ||||||||||| ||||||||||||||||||| |||||| || |||| |   ||||||||||||   || ||||||||    
T  8127033 caaatcgtgacacggttggtgtgtacgacccaagatacgaccaaccttatcctgaaaacgtacctagcaagttgaaaatcgtgtcacactttcccaaaat 8127132  T
Q  114 cgtgtcacgattg 126  Q
    |||| ||||||||    
T  8127133 cgtgacacgattg 8127145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 16264751 - 16264887
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagc-atgccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| ||| |||||||| ||| ||| ||||||||||||||||||||||||||| |||||| || ||| |     |||||||||||| | || |||||||    
T  16264751 caaatcgtggcacgattggtgcgtaccacccaaggtacgaccaaccttatcctgaaaacgtacccagctagtttgaaaatcgtgtcacgttttcccaaaa 16264850  T
Q  113 tcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    ||||| ||||||||   |||||| ||| |||||||||    
T  16264851 tcgtgacacgattgagcaccctgcaaaccatgctcac 16264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 288
Target Start/End: Complemental strand, 4386520 - 4386445
Alignment:
Q  213 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccat 288  Q
    |||||||||| | | |||||||||||||||||||||||||| || |||||||| || |||||| || |||||||||    
T  4386520 ttttgagtcagtatacaacatttctccaccttgactctaaattggtgatgatgtcaatttaaccatcaaccaccat 4386445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 27038448 - 27038502
Alignment:
Q  18 ttgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  27038448 ttgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaac 27038502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 37408257 - 37408199
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  37408257 caaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 37408199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 39032240 - 39032126
Alignment:
Q  13 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaa 111  Q
    |||||| ||| |||||||| ||| |||||||||||||||||||||| |||||||| |||||| || |||| |    ||||||||||||   || ||||||    
T  39032240 tcaaatcgtggcacgattggtgcgtacgacccaaggtacgaccaactttatcctgaaaacgtacccagcaagtttgaaaatcgtgtcacattttcccaaa 39032141  T
Q  112 atcgtgtcacgattg 126  Q
    |||||| ||||||||    
T  39032140 atcgtgacacgattg 39032126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 1735987 - 1735863
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||| ||| ||||||||||||||||||||||||||  ||| ||| ||  || |   |||||||||||| | || ||||||||    
T  1735987 caaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcctaaaaatgtgtcattcaagttgaaaatcgtgtcacgttttcccaaaat 1735888  T
Q  114 cgtgtcacgattggaaaccctgaaaa 139  Q
    |||| ||||||||   ||||||||||    
T  1735887 cgtg-cacgattgagcaccctgaaaa 1735863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 23410727 - 23410840
Alignment:
Q  41 acccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaa 140  Q
    ||||||||||||||||| |||||| || ||||||  ||||||    |||||| ||| || | ||  ||||||| |||||||||||||| |||||| ||||    
T  23410727 acccaaggtacgaccaaacttatcttgaaaacgtatcaagcaacataaaaattgtgacacgtttttccaaaattgtgtcacgattggacaccctgcaaaa 23410826  T
Q  141 catgctcacgacat 154  Q
    ||||||| ||||||    
T  23410827 catgctctcgacat 23410840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 33386359 - 33386247
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| ||| |||||||||| | ||||||||||| ||||||||||||||||||| |||| |  | |||| |    |||||||||||| |||| | |||||    
T  33386359 caaatcgtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattccacaaaa 33386260  T
Q  113 tcgtgtcacgatt 125  Q
    |||||||||||||    
T  33386259 tcgtgtcacgatt 33386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 40735218 - 40735174
Alignment:
Q  23 acacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||    
T  40735218 acacgattggtgcgtacgacccaaggtacgaccaaccttatcctg 40735174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 40845056 - 40845108
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 66  Q
    ||||| |||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  40845056 caaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcct 40845108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 40912917 - 40912805
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||| ||||| |||||||| |||||||| | |||| |||| | || ||| |||||||||||| | || ||||||||    
T  40912917 caaatcgtgacacgtttggtgcgtacgatccaagatacgaccagccttatccagaaaacttgcccaacaagccgaaaatcgtgtcacgttttcccaaaat 40912818  T
Q  114 cgtgtcacgattg 126  Q
     || |||||||||    
T  40912817 tgtatcacgattg 40912805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 48438618 - 48438678
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||| |||||||||||| ||| ||||| ||||||||| ||||||||||||||| ||||||    
T  48438618 caaatcgtgacacgattggtgcgtacgatccaaggtacaaccaaccttatcctgaaaacgt 48438678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 53921855 - 53921946
Alignment:
Q  15 aaattgtgacacgattgatgc--atacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 104  Q
    |||| ||| ||||||||||||  ||||||| |||||||||||||||||||||||| |||| || ||| |||   ||||||||||||| ||||    
T  53921855 aaatcgtgtcacgattgatgcgcatacgactcaaggtacgaccaaccttatcctgaaaacttgtcaaacatattaaaaatcgtgtcacgatt 53921946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 27027118 - 27027161
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    |||||||| ||| |||||||||||||||||||||||||||||||    
T  27027118 cacgattggtgcgtacgacccaaggtacgaccaaccttatcctg 27027161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 5260707 - 5260785
Alignment:
Q  28 attgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||| ||||| |||| |||||||||||||||||||| ||| | |||| | || |||||||||||||||| |||||    
T  5260707 attgatgcgtacgatccaaagtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgattg 5260785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 37726077 - 37726135
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| |||||||||| | |||||||||| |||||||||||||||||||| ||||    
T  37726077 caaatcgtgtcacgattgatacgtacgacccaatgtacgaccaaccttatcctgaaaac 37726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 10058031 - 10057945
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 317  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  10058031 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 10057945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 10060253 - 10060167
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 317  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  10060253 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 10060167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 10062475 - 10062389
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 317  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  10062475 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 10062389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 10064697 - 10064611
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 317  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  10064697 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 10064611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 10066919 - 10066833
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaact 317  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| ||    || ||||||||||||||| ||||    
T  10066919 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatc----ttccttttcccttgcatccaact 10066833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 27986159 - 27986102
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    |||| ||| |||||||||| | ||||||||||| ||||||||||||||||||| ||||    
T  27986159 aaatcgtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaac 27986102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 30709480 - 30709427
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||| |||||||||||| ||| |||||||||||||| |||||| |||||||||    
T  30709480 caaatcgtgacacgattggtgcgtacgacccaaggtaagaccaatcttatcctg 30709427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 23198526 - 23198626
Alignment:
Q  228 caacatttctccaccttgac-tctaaaatgatgatgatgccactttaacaatgaaccaccattct-ccttttcttttcccttgcatctaactacaccaag 325  Q
    |||||||||||||||||||| |||||  || || ||||| || |||||| || |||||||| ||| ||||| ||||||||||||||  ||||| ||||||    
T  23198526 caacatttctccaccttgacttctaatttgttggtgatgtcaatttaaccatcaaccaccaatctccctttgcttttcccttgcattcaactataccaag 23198625  T
Q  326 t 326  Q
    |    
T  23198626 t 23198626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 4599103 - 4599162
Alignment:
Q  228 caacatttctccaccttgac-tctaaaatgatgatgatgccactttaacaatgaaccacc 286  Q
    |||||||||||||||||||| |||||  || |||||||||||||||||| || |||||||    
T  4599103 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 4599162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 10210982 - 10210923
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacc 286  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  10210982 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 10210923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 16498838 - 16498752
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 126  Q
    ||||||||| ||||||||||||||||   ||| |||||| |||||| ||| ||||||||| ||   || ||||||||||| |||||||||    
T  16498838 tacgacccacggtacgaccaacctta---tgtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacgattg 16498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 27453359 - 27453417
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| |||||||||| | |||| | |||||||||||||||||||||||| ||||    
T  27453359 caaatcgtgtcacgattgatacgtacgtcacaaggtacgaccaaccttatcctgaaaac 27453417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 43402588 - 43402661
Alignment:
Q  221 cactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 295  Q
    |||||| ||||||| |||||||||| ||  ||| ||| ||||||||||||||||| || |||||||| |||||||    
T  43402588 cactttacaacatt-ctccaccttgccttcaaattgaagatgatgccactttaaccatcaaccaccaatctcctt 43402661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 51398590 - 51398488
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg-aaaaacatgct 146  Q
    |||||||||||| ||||||  |||| |||| | ||  || ||||| |||||| | || |||||||||||||||| |||||| |||||| |||| ||||||    
T  51398590 gtacgaccaaccatatcctaaaaacttgcccaacaaaccgaaaattgtgtcacgttttcccaaaatcgtgtcacaattggacaccctgcaaaaccatgct 51398491  T
Q  147 cac 149  Q
    |||    
T  51398490 cac 51398488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 24694775 - 24694730
Alignment:
Q  109 aaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 154  Q
    |||||||||  ||||||||| |||||| ||||||||||||||||||    
T  24694775 aaaatcgtgatacgattggacaccctgcaaaacatgctcacgacat 24694730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 27974626 - 27974586
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatc 64  Q
    |||||||||| | ||||||||||||||| ||||||||||||    
T  27974626 cacgattgatacgtacgacccaaggtacaaccaaccttatc 27974586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 37033657 - 37033797
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| |||| ||||  ||| | | |||||||||||||| || || |||||    
T  37033657 caaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgccctgcaaggcgaaaatcgtgtcatgtttcccgaaaat 37033756  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacgacat 154  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  37033757 cgtgtcacgattggacaccctgcaaaacatgctcacgacat 37033797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 49918147 - 49917969
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||||||| ||  |||||||||||||| |||||||||||||||| ||||||||| |||| |  ||||||||||||| | ||  | |||||    
T  49918147 caaatcgtgacacgattggtgtgtacgacccaaggtatgaccaaccttatcctgaaaacgtgcccagcaagttaaaaatcgtgtcacgtttttcgaaaat 49918048  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
    ||||||||||||||  |||||| |||||| |||| |||||| | ||||||||| || | | |||||||||||||| ||||    
T  49918047 cgtgtcacgattgggcaccctgcaaaaca-gctctcgacattgcaaaattgtgacacgcttcacaaatcgtgtcacgatt 49917969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 16455457 - 16455332
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    |||||| ||||| ||||| ||| |||| ||||||| ||||||||||||||||| ||| ||||||||| ||||||||||| ||| ||||||||| |||||     
T  16455457 tgtcacgattggccaaatcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaacgtgccaaacataccaaaaatcatgtcac 16455358  T
Q  101 gattgcccaaaatcgtgtcacgattg 126  Q
    |||||| ||||||||| |||||||||    
T  16455357 gattgctcaaaatcgtatcacgattg 16455332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 328
Target Start/End: Complemental strand, 776866 - 776751
Alignment:
Q  213 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatc 312  Q
    ||||||| ||| || |||||||||||||||||||||||||| ||||| |||||  |||||||| || ||||||||||||||||||   || |||||||||    
T  776866 ttttgagacacatttcaacatttctccaccttgactctaaattgatggtgatggaactttaaccatcaaccaccattctccttttgcatttccttgcatc 776767  T
Q  313 taactacaccaagtag 328  Q
     |||||||||||||||    
T  776766 caactacaccaagtag 776751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 11348298 - 11348121
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||| ||| ||||| |||| |||||||||||||||||||| |||| |||| | || ||| |||||||||||| | ||  ||||||||    
T  11348298 aaatcgtgacacgtttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaacttgcccaacaagccgaaaatcgtgtcacgtttctccaaaatc 11348199  T
Q  115 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
    ||||||||||| || |||||| |||||| |||| |||||| | ||||| ||| || | | |||||||||||||| ||||    
T  11348198 gtgtcacgattagacaccctgcaaaaca-gctctcgacattgcaaaatcgtgacacgcttcacaaatcgtgtcacgatt 11348121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 20762460 - 20762344
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| | ||| | ||||||||||||||||||||||| ||| | |||| | || |||||||||||||||| |||| |||||||||||||||||    
T  20762460 cacgattgatgcgttcgatcaaaggtacgaccaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgatttcccaaaatcgtgtcacg 20762361  T
Q  123 attggaaaccctgaaaa 139  Q
    ||||||  |||||||||    
T  20762360 attggacgccctgaaaa 20762344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 31659036 - 31658908
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| |||| | || |||| || |||||| |||||| | || ||||||||    
T  31659036 caaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaactttcccagcaagcaaaaaattgtgtcacgttttcccaaaat 31658937  T
Q  114 cgtgtcacgattggaaaccctgaaaaaca 142  Q
    ||||||||||||||  |||||| ||||||    
T  31658936 cgtgtcacgattgggcaccctgcaaaaca 31658908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 46064722 - 46064631
Alignment:
Q  8 attggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 99  Q
    ||||| ||||| ||| |||| ||||| | |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  46064722 attggccaaatcgtgtcacggttgatacgtacgacccaaggtacgaccaactttatcctgaaaatgtgccaagcatgccaaaaatcgtgtca 46064631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 44454957 - 44454843
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||  ||| ||||||||||||||| |||||||||||| || |||| |||| |||| ||| |||||||||||| | || ||||||||    
T  44454957 caaatcgtgacacgtttagtgcgtacgacccaaggtacaaccaaccttatcttgaaaacttgcccagcaagccgaaaatcgtgtcacgtttccccaaaat 44454858  T
Q  114 cgtgtcacgattgga 128  Q
    |||||||||||||||    
T  44454857 cgtgtcacgattgga 44454843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 213 - 328
Target Start/End: Original strand, 50167718 - 50167839
Alignment:
Q  213 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctttt-cttttc-----cct 306  Q
    ||||||| ||| || |||||||||||||||||||||||||| ||||| |||||  |||||||| || |||||||||||||||||| ||||||     |||    
T  50167718 ttttgagacacatttcaacatttctccaccttgactctaaattgatggtgatgaaactttaaccatcaaccaccattctccttttccttttccttttcct 50167817  T
Q  307 tgcatctaactacaccaagtag 328  Q
    |||||| |||||||||||||||    
T  50167818 tgcatccaactacaccaagtag 50167839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 3189150 - 3189023
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggt-acgaccaaccttatcct-gtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaa 111  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||   |||| |||| |||| | | |||||||||||| | || ||||||    
T  3189150 caaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaa 3189051  T
Q  112 atcgtgtcacgattggaaaccctgaaaa 139  Q
    || ||||||||||||||  |||||||||    
T  3189050 attgtgtcacgattggacgccctgaaaa 3189023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 3197967 - 3197840
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggt-acgaccaaccttatcct-gtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaa 111  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||   |||| |||| |||| | | |||||||||||| | || ||||||    
T  3197967 caaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaa 3197868  T
Q  112 atcgtgtcacgattggaaaccctgaaaa 139  Q
    || ||||||||||||||  |||||||||    
T  3197867 attgtgtcacgattggacgccctgaaaa 3197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 3206785 - 3206658
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggt-acgaccaaccttatcct-gtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaa 111  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||   |||| |||| |||| | | |||||||||||| | || ||||||    
T  3206785 caaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcctaaaaaacttgcccagcaagtcgaaaatcgtgtcacgttttcccaaa 3206686  T
Q  112 atcgtgtcacgattggaaaccctgaaaa 139  Q
    || ||||||||||||||  |||||||||    
T  3206685 attgtgtcacgattggacgccctgaaaa 3206658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 4553018 - 4553197
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||||||| |||||| || | |||||| |||||||||||| ||||||| ||| || | | |||||| | ||| | || | ||||||    
T  4553018 caaatcgtgacacggttgatgcgtacgactcacgatacgactaaccttatcctgaaaacgtgtcaaacaagtcgaaaatcatatcacgttttctcaaaat 4553117  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtcatgatt 193  Q
    ||||||||||||||| |||||| |||||||| ||||| ||| |  |||| ||| || | | |||||||||||||| ||||    
T  4553118 cgtgtcacgattggataccctgcaaaacatgttcacggcattgcgaaatcgtgacacgcttcacaaatcgtgtcacgatt 4553197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 3156636 - 3156554
Alignment:
Q  43 ccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgatt 125  Q
    ||||||||||||||||||||||||| ||||||| | ||||  ||||||||||||| ||| || ||||||||||||||||||||    
T  3156636 ccaaggtacgaccaaccttatcctgaaaacgtgtccagcaaaccaaaaatcgtgttatgttttcccaaaatcgtgtcacgatt 3156554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 13598803 - 13598863
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  13598803 caaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 13598863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 13316698 - 13316779
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgatt 104  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| ||||    
T  13316698 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgatt 13316779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 295
Target Start/End: Original strand, 13547837 - 13547922
Alignment:
Q  211 atttttgagtcactttg-caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 295  Q
    ||||||||||||| ||  ||||| |||||||| |||||||||||||||||||||||| | |||||| || ||||||||||||||||    
T  13547837 atttttgagtcacattctcaacaattctccacattgactctaaaatgatgatgatgctaatttaaccatcaaccaccattctcctt 13547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 29135847 - 29135763
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 99  Q
    |||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||| |||| ||  |||||| |||||    
T  29135847 aaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagcaagctgaaaatcatgtca 29135763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 193184 - 193057
Alignment:
Q  22 gacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcac 121  Q
    |||||| ||| ||| ||||||||||||||||||||| ||||||||  |||| |||| |||| ||| ||||| || ||| | ||  ||||||| ||||||     
T  193184 gacacgtttggtgcgtacgacccaaggtacgaccaatcttatcctaaaaacttgcccagcaagccgaaaatggtatcacgtttttccaaaattgtgtcat 193085  T
Q  122 gattggaaaccctgaaaaacatgctcac 149  Q
    ||||||| |||||| ||| |||||||||    
T  193084 gattggacaccctgcaaaccatgctcac 193057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 28223791 - 28223920
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagc-atgccaaaaatcgtgtcatgattgcccaaaa 112  Q
    |||||||||||||| ||  ||| |||||||||||||||||||||||||||| |  | || || |  || | ||| |||||||||||| | || |||||||    
T  28223791 caaattgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaatcgtgtcacgttttcccaaaa 28223890  T
Q  113 tcgtgtcacgattggaaaccctgaaaaaca 142  Q
    |||||||||||||||  |||||| ||||||    
T  28223891 tcgtgtcacgattgggcaccctgcaaaaca 28223920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 37070170 - 37070283
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||| |||||| || | || |    |||||||||||| | || |||||||    
T  37070170 caaatcgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccaacaagtttgaaaatcgtgtcacgttttcccaaaa 37070269  T
Q  113 tcgtgtcacgattg 126  Q
    ||||| ||||||||    
T  37070270 tcgtgacacgattg 37070283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 10925021 - 10924893
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||||||| || ||||||||||| ||||||| ||||  || |||| |||| | || ||| ||||||||||||   ||  |||||||    
T  10925021 caaatcgtgacacggttgatgcgtatgacccaaggtatgaccaactttattttgaaaacttgcctaccaagccgaaaatcgtgtcacatttttccaaaat 10924922  T
Q  114 cgtgtcacgattggaaaccctgaaaaaca 142  Q
    ||||||||||||||  |||||| ||||||    
T  10924921 cgtgtcacgattgggtaccctgcaaaaca 10924893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 1833320 - 1833205
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac-gtgccaagcatgccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||| ||| ||| ||| |||||||||| ||||||||||||| || |||  || |  |||| |||||||||||||| ||| || |||||||    
T  1833320 caaatcgtgacacgtttggtgcgtacaacccaaggtatgaccaaccttatcttgaaaaatgtactcagcaagccaaaaatcgtgttatgttttcccaaaa 1833221  T
Q  113 tcgtgtcacgattgga 128  Q
    ||||||||| ||||||    
T  1833220 tcgtgtcaccattgga 1833205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 13604317 - 13604259
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  13604317 caaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 13604259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22819820 - 22819918
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 99  Q
    |||||| |||||  ||||||||  ||| | ||||| ||||||||||||||||||||| ||||| ||| ||||||| ||| ||||| ||||||| |||||    
T  22819820 tgtcacgattggcaaaattgtgttacggtcgatgcgtacgacccaaggtacgaccaaacttattctgaaaacgtgtcaaacatgcgaaaaatcatgtca 22819918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 28221484 - 28221542
Alignment:
Q  270 tttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 328  Q
    |||||| || |||||||||  |||||||||||||||||||||| |||||||||||||||    
T  28221484 tttaaccatcaaccaccatgatccttttcttttcccttgcatccaactacaccaagtag 28221542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 28220596 - 28220725
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagc-atgccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||| ||  ||| |||||||||||||||||||||||||||| |  | || || |  || | ||| |||||||||||| | || |||||||    
T  28220596 caaatcgtgacacgttttgtgcgtacgacccaaggtacgaccaaccttatcttaaatacttgtcgtgcaaagccgaaaatcgtgtcacgttttcccaaaa 28220695  T
Q  113 tcgtgtcacgattggaaaccctgaaaaaca 142  Q
    |||||||||||||||  |||||| ||||||    
T  28220696 tcgtgtcacgattgggcaccctgcaaaaca 28220725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 29652216 - 29652269
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||| |||||||||||| ||  |||||||||||||||||||||||||||||||    
T  29652216 caaatcgtgacacgattggtgtgtacgacccaaggtacgaccaaccttatcctg 29652269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 318
Target Start/End: Complemental strand, 41360545 - 41360441
Alignment:
Q  213 ttttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatc 312  Q
    |||||||||| ||| |||||||||||||||||||||||||  ||||| ||||| ||  ||||| || |||||||||||| || ||| | | |||||||||    
T  41360545 ttttgagtcaattttcaacatttctccaccttgactctaatttgatggtgatgtca-attaaccatcaaccaccattcttctcttcatattccttgcatc 41360447  T
Q  313 taacta 318  Q
     |||||    
T  41360446 caacta 41360441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 328
Target Start/End: Complemental strand, 31658812 - 31658721
Alignment:
Q  237 tccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaagtag 328  Q
    ||||||||| ||  ||| ||||||||||| ||||||||| || |||||||| || || ||||||||||| ||||||| |||||||||||||||    
T  31658812 tccaccttgccttcaaattgatgatgatgtcactttaaccatcaaccaccaatcccccttttcttttcc-ttgcatccaactacaccaagtag 31658721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 295
Target Start/End: Complemental strand, 19753969 - 19753902
Alignment:
Q  228 caacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 295  Q
    ||||| |||| |||||||||| ||||||||||||||| | | |||||| || ||||||||||||||||    
T  19753969 caacaattcttcaccttgactataaaatgatgatgatcctaatttaaccatcaaccaccattctcctt 19753902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 3282108 - 3282222
Alignment:
Q  13 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaa 111  Q
    |||||| ||| |||||||| ||| |||||||||||||| ||||||||||||| || |||||| || |||| |    |||||||||||| | || | ||||    
T  3282108 tcaaatcgtggcacgattggtgcgtacgacccaaggtatgaccaaccttatcttgaaaacgtacccagcaagtttgaaaatcgtgtcacgttttctcaaa 3282207  T
Q  112 atcgtgtcacgattg 126  Q
    |||||| ||||||||    
T  3282208 atcgtgacacgattg 3282222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 13547677 - 13547766
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 104  Q
    ||||| |||||||| ||| ||| |||||||||||||||||||||||||||  || ||||||||| |||| ||  ||||| |||||| ||||    
T  13547677 caaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaattgtgtcacgatt 13547766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 13549588 - 13549677
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 104  Q
    ||||| |||||||| ||| ||| |||||||||||||||||||||||||||  || ||||||||| |||| ||  ||||| |||||| ||||    
T  13549588 caaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat-ttgaaaacgtgcccagcaagctgaaaattgtgtcacgatt 13549677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 21536255 - 21536205
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    |||||||| ||| |||||||||||||||||||||||| |||||| ||||||    
T  21536255 cacgattggtgcgtacgacccaaggtacgaccaacctcatcctgaaaacgt 21536205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 15820090 - 15820053
Alignment:
Q  29 ttgatgcatacgacccaaggtacgaccaaccttatcct 66  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  15820090 ttgatgcgtacgacccaaggtacgaccaaccttatcct 15820053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 13659696 - 13659782
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 126  Q
    ||||||||| ||||||||||||||||   ||| |||||| |||||| ||| ||||||||| ||   || ||||||||||| |||||||||    
T  13659696 tacgacccacggtacgaccaacctta---tgtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacgattg 13659782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 47703404 - 47703333
Alignment:
Q  215 ttgagtcactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccacc 286  Q
    |||||||| ||| |||||||| ||||||||||||||||| || || ||||| || |||||| || |||||||    
T  47703404 ttgagtcaatttacaacatttatccaccttgactctaaattggtggtgatgtcaatttaaccatcaaccacc 47703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 30476818 - 30476908
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgatt 104  Q
    ||||| |||||||| ||| ||  ||||||||||||| | |||||||||||| || |||| |||| ||||  || |||||||||||| ||||    
T  30476818 caaatcgtgacacgtttggtgtgtacgacccaaggttcaaccaaccttatcttgaaaacttgcccagcaaaccgaaaatcgtgtcacgatt 30476908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 295
Target Start/End: Original strand, 31928443 - 31928509
Alignment:
Q  229 aacatttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctcctt 295  Q
    |||| |||||||||||||||||||| | ||| |||||||| |||||| || ||||||| | ||||||    
T  31928443 aacaattctccaccttgactctaaatttatggtgatgccaatttaaccatcaaccaccttgctcctt 31928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 16124327 - 16124294
Alignment:
Q  41 acccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||||||||||||||||||||||||| ||||||    
T  16124327 acccaaggtacgaccaaccttatcctgaaaacgt 16124294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 9986931 - 9986895
Alignment:
Q  89 aaatcgtgtcatgattgcccaaaatcgtgtcacgatt 125  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  9986931 aaatcgtgtcacgatttcccaaaatcgtgtcacgatt 9986895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 80871 - 81006
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| ||||||||| || | || ||||||||    
T  80871 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtgccacgttttcccaaaat 80970  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    ||||||||||||||| ||||||||||  ||||||||    
T  80971 cgtgtcacgattggataccctgaaaacaatgctcac 81006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 11138 - 11002
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| |||||||||| |||||||||||||||||||| |||| |||| ||||  || ||||||||||||   || ||||||||    
T  11138 caaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaatcgtgtcacatttccccaaaat 11039  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacg 150  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  11038 cgtgtcacgattggacaccctgcaaaacatgctcacg 11002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 17635 - 17781
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatc 114  Q
    |||| |||||||| ||| ||| |||||| || |||||||||||||||||| || || | |||| |||| |||||||||||||||| | || |||||||||    
T  17635 aaatcgtgacacgtttggtgcgtacgactcagggtacgaccaaccttatcatgaaagcttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatc 17734  T
Q  115 gtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaa 161  Q
    |||||||| ||||| |||||| ||||||||||| |||||| ||||||    
T  17735 gtgtcacggttggacaccctgcaaaacatgctctcgacattggaaaa 17781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 20785 - 20959
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||  ||| ||||||||||||||||||||||||||| ||  |||| | || | || ||| |||||||||||| | || ||||||||    
T  20785 caaatcgtgacacgtttagtgcgtacgacccaaggtacgaccaaccttattctaaaaactttcccaacaagccgaaaatcgtgtcacgttttcccaaaat 20884  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtcatggtccacaaatcgtgtca 188  Q
    ||||||| ||||||| |||||| |||||||||||||||||| | ||||| ||| || | | ||||||||||||||    
T  20885 cgtgtcatgattggacaccctgcaaaacatgctcacgacattgcaaaatcgtgacacgcttcacaaatcgtgtca 20959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 37438934 - 37438808
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    |||||||||||| |||||||||||||||||| |||||||||||| ||| | |||| | || |||||||||||||||| | || ||||||||| |||||||    
T  37438934 cacgattgatgcgtacgacccaaggtacgacaaaccttatcctgaaaatcttgcccaacaagccaaaaatcgtgtcacgttttcccaaaatcatgtcacg 37438835  T
Q  123 attggaaaccctgaaaaacatgctcac 149  Q
    |||||| || ||||||| |||||||||    
T  37438834 attggacactctgaaaaccatgctcac 37438808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 42426605 - 42426741
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||| | ||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||  || ||||| |||||| | || ||||||||    
T  42426605 caaatcgtgacatgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaaaccgaaaattgtgtcacgttttcccaaaat 42426704  T
Q  114 cgtgtcacgattggaaaccctg-aaaaacatgctcac 149  Q
    ||||||||||||||| |||||| |||| |||||||||    
T  42426705 cgtgtcacgattggacaccctgcaaaaccatgctcac 42426741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 13488001 - 13487869
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||| ||| |||||||||   || || ||||||||    
T  13488001 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaatcgtg--ctgttttcccaaaat 13487904  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctca 148  Q
    |||||||||||||   ||||||||||| |||||||    
T  13487903 cgtgtcacgattgagcaccctgaaaaatatgctca 13487869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 5057629 - 5057495
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaat 113  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||| |||  | || | | ||||| |||||| | ||  |||||||    
T  5057629 caaattgtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcctgaaaacttgctcaacaagtcgaaaattgtgtcacgttttaccaaaat 5057530  T
Q  114 cgtgtcacgattggaaaccctgaaaaacatgctca 148  Q
    ||||||||||||||| ||||||||||  |||||||    
T  5057529 cgtgtcacgattggacaccctgaaaactatgctca 5057495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 13239540 - 13239425
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacga 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||| || | |||| | |||| ||||||||| | || ||||||||| ||||||||    
T  13239540 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagtcaaagatcgtgtcacgtttacccaaaatcttgtcacga 13239441  T
Q  124 ttggaaaccctgaaaa 139  Q
    ||| | ||||| ||||    
T  13239440 ttgaacaccctaaaaa 13239425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 328
Target Start/End: Complemental strand, 13487796 - 13487702
Alignment:
Q  234 ttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 328  Q
    |||||||||||||||  ||| ||||||||||||||||||||| || |||||||| ||| |||||||||||| ||||||| || ||||||||||||    
T  13487796 ttctccaccttgacttcaaattgatgatgatgccactttaaccatcaaccaccaatcttcttttcttttcctttgcatccaagtacaccaagtag 13487702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 42428822 - 42428924
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctg-aaaaacatgct 146  Q
    |||||||||||||||||||  |||| |||| |||| |||||||||||||||| | || ||||||||||||||||||||||| |||||| |||| ||||||    
T  42428822 gtacgaccaaccttatcctaaaaacttgcccagcaagccaaaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacaccctgcaaaaccatgct 42428921  T
Q  147 cac 149  Q
    |||    
T  42428922 cac 42428924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 32636622 - 32636486
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg-taaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| |||||||| ||| ||| || ||||||||||||||||||||||||||||  |||| |||| |||| | | ||||||||| || | || |||||||    
T  32636622 caaatcgtgacacgtttggtgcgtaagacccaaggtacgaccaaccttatcctgaaaaacttgcccagcaagtcgaaaatcgtgccacgttttcccaaaa 32636523  T
Q  113 tcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    |||||||||||||||| ||| || |||||||| ||||    
T  32636522 tcgtgtcacgattggacaccttgcaaaacatgttcac 32636486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 3076045 - 3076210
Alignment:
Q  69 aaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtc 168  Q
    |||||| |||||||||||||||||||||||| | |||||||||||| ||||||  ||| | || |   ||||||||||||| |||||||||||| ||  |    
T  3076045 aaacgtaccaagcatgccaaaaatcgtgtcacggttgcccaaaatcttgtcacatttgtacacacaagaaaacatgctcacaacataggaaaatcgtaac 3076144  T
Q  169 atggtccacaaatcgtgtcatgatttgtaacatgctc--aaatcatttttgagtcactttgcaaca 232  Q
    | | | |||||||||||||| |||||| ||| |  ||  |||||||||||||||||| || |||||    
T  3076145 acgcttcacaaatcgtgtcacgatttgcaactttttccaaaatcatttttgagtcacattacaaca 3076210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 16650979 - 16651121
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    ||||||| || | ||||| |||||||| ||| ||| ||||| ||||||||||||||||||||||||| |||||| || | || |  | |||||||||||     
T  16650979 tgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaacgtacccaacaagttataaatcgtgtcac 16651078  T
Q  101 gattgcccaaaatcgtgtcacgattggaaaccctgaaaaacat 143  Q
    | || ||||||||||||||| |||||   ||||||||||||||    
T  16651079 gttttcccaaaatcgtgtcatgattgagtaccctgaaaaacat 16651121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 19806198 - 19806113
Alignment:
Q  20 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||  ||||||||| |||| ||| |||||||||||| |||||    
T  19806198 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctaaaaacgtgcctagcaagccgaaaatcgtgtcacgattg 19806113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 535700 - 535616
Alignment:
Q  15 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtca 99  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||||| |||| || | |||| ||| ||||||||||||    
T  535700 aaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtca 535616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 12083872 - 12083812
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  12083872 caaatcgtgacacgattggtgcatacgacccaaggtacgaccaaccttatcctgaaaacgt 12083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 39468909 - 39468993
Alignment:
Q  21 tgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||  ||||||| | |||| ||| |||||||||||| |||||    
T  39468909 tgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctaaaaacgtgtccagcaagccgaaaatcgtgtcacgattg 39468993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 25412550 - 25412468
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  25412550 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 25412468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 29722156 - 29722055
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattct--ccttttcttttcccttgcatctaactacaccaa 324  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||| |||  |||||| |||||||||||||| ||||| |||||    
T  29722156 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccaccaatctccccttttgttttcccttgcatccaactataccaa 29722057  T
Q  325 gt 326  Q
    ||    
T  29722056 gt 29722055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 14520632 - 14520692
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  14520632 caaatcgtgacacgattaatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 14520692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 40146824 - 40146712
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctga 136  Q
    |||||||||||||||||||||| || ||||| ||||||| | | || ||  ||||||| ||||   || ||||||||||||||||||||||| |||||||    
T  40146824 tacgacccaaggtacgaccaactttttcctgaaaacgtgaccaacaagctgaaaatcgagtcacattttcccaaaatcgtgtcacgattggacaccctga 40146725  T
Q  137 aaaacatgctcac 149  Q
    ||| |||| ||||    
T  40146724 aaaccatgttcac 40146712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 328
Target Start/End: Original strand, 42426825 - 42426921
Alignment:
Q  232 atttctccaccttgactctaaaatgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 328  Q
    ||||||||||||||| |  ||| ||||||||||||||||||||  || |||||||| |  | ||||||||||||||||||| | |||||||||||||    
T  42426825 atttctccaccttgaattcaaattgatgatgatgccactttaagtatcaaccaccaattcctttttcttttcccttgcatccatctacaccaagtag 42426921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 27015112 - 27015021
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| | || ||  |||||||||||| |||||    
T  27015112 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccaacaagctgaaaatcgtgtcacgattg 27015021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 30683312 - 30683403
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaa 139  Q
    |||||||||||||||||||| |||| |||| |||| | | |||||||||||| | || |||||||| |||||||||||||| || |||||||    
T  30683312 gtacgaccaaccttatcctgaaaacttgcctagcaagtcgaaaatcgtgtcacgttttcccaaaattgtgtcacgattggacactctgaaaa 30683403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 36932045 - 36931986
Alignment:
Q  13 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  36932045 tcaaattgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 36931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 13342849 - 13342767
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||| ||||| | ||||||||||||||||||||||| ||| | |||| |||| |||||||||||||||| |||||    
T  13342849 cacgattgatgcgtacgatctaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgtcacgattg 13342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 30182376 - 30182302
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgt 97  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| ||||||||||||||    
T  30182376 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaatcgtgt 30182302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 38746585 - 38746535
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatc 64  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  38746585 caaattgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 11181537 - 11181433
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcat 100  Q
    |||||| ||||  |||||||||||||| ||||| | ||| ||||| |||| ||||||||||||| |||| ||||||||| ||   | ||||||||||||     
T  11181537 tgtcacgattgaccaaattgtgacacggttgatacgtacaacccacggtatgaccaaccttatcttgtatacgtgccaaacaaatcgaaaatcgtgtcac 11181438  T
Q  101 gattg 105  Q
    |||||    
T  11181437 gattg 11181433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 16409081 - 16408981
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaag 325  Q
    ||||||||||||||||||||| ||||  || || ||||| ||||||||| || |||||||| || || ||||||||||||||||||  ||||| ||||||    
T  16409081 caacatttctccaccttgacttctaatttggtggtgatgtcactttaaccatcaaccaccaatcccccttttcttttcccttgcattcaactataccaag 16408982  T
Q  326 t 326  Q
    |    
T  16408981 t 16408981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 11916667 - 11916608
Alignment:
Q  13 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    |||||| |||| ||||||| ||| |||||||||||||||||||||||| |||||| ||||    
T  11916667 tcaaatcgtgatacgattggtgcgtacgacccaaggtacgaccaacctgatcctgaaaac 11916608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 535513 - 535459
Alignment:
Q  221 cactttgcaacatttctccaccttgactctaaaatgatgatgatgccactttaac 275  Q
    |||||| |||||||||||||||||| ||  ||| |||||||||||||||||||||    
T  535513 cactttacaacatttctccaccttgccttcaaattgatgatgatgccactttaac 535459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 9353029 - 9352971
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| ||||||||||   ||||||||||||||||||||||||||||||| ||||    
T  9353029 caaatcgtgccacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaac 9352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 213068 - 213007
Alignment:
Q  88 aaaatcgtgtcatgattgcccaaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    |||||||||||| | || |||||||||||||||||||||||  ||||| ||| |||||||||    
T  213068 aaaatcgtgtcacgttttcccaaaatcgtgtcacgattggacgccctgcaaaccatgctcac 213007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16649980 - 16650044
Alignment:
Q  1 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcc 65  Q
    ||||||| || | ||||| |||||||| ||| ||| ||||| |||||||||||||||||||||||    
T  16649980 tgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 31004848 - 31004796
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 66  Q
    ||||| |||||||||||| ||| |||||||||| |||| ||||||||||||||    
T  31004848 caaatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcct 31004796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 36074427 - 36074467
Alignment:
Q  27 gattgatgcatacgacccaaggtacgaccaaccttatcctg 67  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  36074427 gattgatgcgtacgatccaaggtacgaccaaccttatcctg 36074467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 16546220 - 16546161
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacc 286  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  16546220 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 16546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 40381893 - 40381834
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccacc 286  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| || |||||||    
T  40381893 caacatttctccaccttgacttctaatttggtgatgatgccactttaaccatcaaccacc 40381834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 11181450 - 11181412
Alignment:
Q  109 aaaatcgtgtcacgattggaaaccctgaaaaacatgctc 147  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  11181450 aaaatcgtgtcacgattggacaccctgcaaaacatgctc 11181412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 38746534 - 38746456
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 126  Q
    |||||||||||||||||||| |||| || | |||| ||| |||||||||||| | ||  ||||||  ||||||||||||    
T  38746534 gtacgaccaaccttatcctgaaaacttgtccagcaagccgaaaatcgtgtcacgtttttccaaaaatgtgtcacgattg 38746456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 533545 - 533488
Alignment:
Q  48 gtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    |||||||||||||||||||| |||| |||| |||| ||| |||| ||||||| |||||    
T  533545 gtacgaccaaccttatcctgaaaacttgcccagcaagccgaaaaccgtgtcacgattg 533488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 434321 - 434217
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaa-tcgtgtcatgattgcccaaaatcgtgtcac 121  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||| ||| | |||| |||| |||||||| |||||||| |||| ||||||||||||||||    
T  434321 cacgatttatgcgtacgatccaaggtacgaccaaccttatcctgaaaatcttgcccagcaagccaaaaaatcgtgtcacgatttcccaaaatcgtgtcac 434222  T
Q  122 gattg 126  Q
    |||||    
T  434221 gattg 434217  T

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Target: scaffold0006 (Bit Score: 49; Significance: 7e-19; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 6088 - 6148
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 74  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  6088 caaattgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 6148  T

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Target: scaffold0006; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 2896 - 2954
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  2896 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaac 2954  T

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Target: scaffold0006; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 132974 - 132916
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  132974 caaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 132916  T

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Target: scaffold0006; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 149457 - 149543
Alignment:
Q  37 tacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacgattg 126  Q
    ||||||||| ||||||||||||||||   ||| |||||| |||||| ||| ||||||||| ||   || ||||||||||| |||||||||    
T  149457 tacgacccacggtacgaccaacctta---tgtcaacgtgtcaagcaagccgaaaatcgtgacacattttcccaaaatcgtatcacgattg 149543  T

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Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 43656 - 43598
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  43656 caaatcgtgccacgattgatacatacgacccaaggtacgaccaaccttatcctgaaaac 43598  T

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Target: scaffold0087; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 36527 - 36387
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| ||| || ||||| ||| ||||||||||||||||||||||||||||||| |||||| || |||| |    ||||| |||||| | || | |||||    
T  36527 caaatcgtgccatgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtacccagcaagtttgaaaattgtgtcacgttttcacaaaa 36428  T
Q  113 tcgtgtcacgattggaaaccctgaaaaacatgctcacgacat 154  Q
    ||||| ||||||| || |||||| ||| || |||||||||||    
T  36427 tcgtgccacgatttgacaccctgcaaacca-gctcacgacat 36387  T

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Target: scaffold0491 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 326
Target Start/End: Original strand, 9304 - 9404
Alignment:
Q  228 caacatttctccaccttgact-ctaaaatgatgatgatgccactttaacaatgaaccaccattctcc-ttttcttttcccttgcatctaactacaccaag 325  Q
    ||||||||||||||||||||| ||||  ||||| ||||| ||||||||| || |||||||| || || ||||||||||||||||||  ||||| ||||||    
T  9304 caacatttctccaccttgacttctaatttgatggtgatgtcactttaaccatcaaccaccaatcccccttttcttttcccttgcattcaactataccaag 9403  T
Q  326 t 326  Q
    |    
T  9404 t 9404  T

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Target: scaffold0140 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 8113 - 8054
Alignment:
Q  13 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    |||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  8113 tcaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 8054  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 114374 - 114270
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaa-cgtgccaagcatgccaaaaatcgtgtcatgattgcccaaaatcgtgtcacg 122  Q
    ||||| |||||| ||||||||||||||| ||||||||||||||| |||   |||| |||| ||| |||||||||||| | || ||||| ||||||||| |    
T  114374 cacgagtgatgcgtacgacccaaggtaccaccaaccttatcctgaaaattttgcccagcaagcc-aaaatcgtgtcacgttttcccaatatcgtgtcatg 114276  T
Q  123 attgga 128  Q
    ||||||    
T  114275 attgga 114270  T

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Target: scaffold0098 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 45601 - 45756
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatg-ccaaaaatcgtgtcatgattgcccaaaa 112  Q
    ||||| ||| ||||||||||   ||||||||||||||||||||||||||||||| |||| |  | |||| |    |||||||||||| |||| | || ||    
T  45601 caaatcgtgtcacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaacttagccagcaagtttgaaaatcgtgtcacgatttcacagaa 45700  T
Q  113 tcgtgtcacgattggaaaccctgaaaaacatgctcacgacataggaaaattgtgtca 169  Q
    ||||| ||||||| || |||||| ||| || |||||||||||   ||||||||||||    
T  45701 tcgtgccacgatttgacaccctgcaaatca-gctcacgacattacaaaattgtgtca 45756  T

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Target: scaffold0466 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 6907 - 6816
Alignment:
Q  14 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgccaaaaatcgtgtcatgattg 105  Q
    ||||| |||||| | ||| ||| ||||||||||||||| ||||||||||||||| |||||| || |||| |   |||||||||||| |||||    
T  6907 caaatcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgttcctagcaagttgaaaatcgtgtcacgattg 6816  T

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Target: scaffold0466; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 6833 - 6793
Alignment:
Q  109 aaaatcgtgtcacgattggaaaccctgaaaaacatgctcac 149  Q
    |||||||||||||||||||| |||||| ||| |||||||||    
T  6833 aaaatcgtgtcacgattggacaccctgcaaaccatgctcac 6793  T

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Target: scaffold1908 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1908
Description:

Target: scaffold1908; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 1114 - 1041
Alignment:
Q  255 tgatgatgatgccactttaacaatgaaccaccattctccttttcttttcccttgcatctaactacaccaagtag 328  Q
    ||||||||||||||||||||| || |||||||| || | ||||  ||| ||||||||| | |||||||||||||    
T  1114 tgatgatgatgccactttaaccatcaaccaccaatcccatttttcttttccttgcatccatctacaccaagtag 1041  T

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Target: scaffold0510 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 1295 - 1247
Alignment:
Q  24 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 72  Q
    |||||||||| | ||||||| ||||||||||||||||||||||| ||||    
T  1295 cacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaac 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 25570 - 25531
Alignment:
Q  88 aaaatcgtgtcatgattgcccaaaatcgtgtcacgattgg 127  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  25570 aaaatcgtgtcacgattggccaaaatcgtgtcacgattgg 25531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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