View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3913_high_33 (Length: 289)
Name: NF3913_high_33
Description: NF3913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3913_high_33 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 275
Target Start/End: Original strand, 47027843 - 47028106
Alignment:
| Q |
11 |
cagagagttcagagagtctgtattgccttcaaaaactactgtgaggagaaaaacatagaagggtaagcttcaaaatatcatgtctaattttctgtatgtt |
110 |
Q |
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| T |
47027843 |
cagagagttcagagagtctgtattgccttcaaaaactactgtgaggagaaaaacatagaagggtaagcttcaaaatatcatgtctaattttctttatgtt |
47027942 |
T |
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| Q |
111 |
ttgaaaactctttggcaatacaatgttcatattctgataggaaaaaatatacatgnnnnnnnnnnnnnngcatttcaggtgctttaaaagcctgcaagac |
210 |
Q |
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| T |
47027943 |
ttgaaaactctttggcaatacaatgttcatattctgataggaaaaaatatacatg-ttttttttttgttgcatttcaggtgctttaaaagcctgcaagac |
47028041 |
T |
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| Q |
211 |
ataaagcaggagtataccttagtgaaaaccaagtttgagacactctttaaggtaaggagatgaag |
275 |
Q |
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| T |
47028042 |
ataaagcaggagtataccttagtgaaaaccaagtttgagacactctttaaggtaaggagatgaag |
47028106 |
T |
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