View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3913_high_49 (Length: 225)
Name: NF3913_high_49
Description: NF3913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3913_high_49 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 47136002 - 47136220
Alignment:
| Q |
7 |
gaaacggcaaaaacagttctggaattccaatatgataccttccaatataaagctttttgataatgtaagcactaagtagaccaccctgtaaggcaatgaa |
106 |
Q |
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| T |
47136002 |
gaaacggcaaaaacagttctggaattccaatatgataccttccaatataaagctttttgataatgtaagcactaagtagaccaccctgtaaggcaatgaa |
47136101 |
T |
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| Q |
107 |
gacacatcacaccagagccacatgcacatttgtacttgagagaatcaaagagagcaagacagttaccaaaactcaaagcatagtgcttgctataaacaga |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
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| T |
47136102 |
gacacatcacaccagagccacatgcacatttgtacttgagagaatcaaagagagcaagacagttaccaaaactccaagcatggtgcttgctataaacaga |
47136201 |
T |
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| Q |
207 |
tacaagaagtagccaaaaa |
225 |
Q |
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|||||||||| |||||||| |
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| T |
47136202 |
tacaagaagttgccaaaaa |
47136220 |
T |
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