View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3913_low_37 (Length: 272)
Name: NF3913_low_37
Description: NF3913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3913_low_37 |
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Alignment Details
Target: chr3 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 30784001 - 30784266
Alignment:
| Q |
1 |
tttcctttctttcgattgcatgctattctcttctttctctctaacccctacgctcctatagtatttttatataagtcagttgaaatccaaaatcagttct |
100 |
Q |
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| T |
30784001 |
tttcctttctttcggttgcatgctattctcttctttctctctaacccctacgctcctatagtatttttatataagtcagttgaaatccaaaatcagttct |
30784100 |
T |
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| Q |
101 |
atgtccataatctgcctataactaattaacataactatcaattagttaattaatcaccagtcatatcaataaccttcaattatttgaaagctaatatgag |
200 |
Q |
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| T |
30784101 |
atgtcaataatctgcctataactaattaacataactatcaattagttaattaatcaccagtcatatcaataaccttcaattatttgaaagctaatatgag |
30784200 |
T |
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| Q |
201 |
ataaaaacacacttttaaaaaaccatattccccccaaaaattccaataatagcatagaataattta |
266 |
Q |
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|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
30784201 |
ataaaaacacactttttaaaaaccatactccccccaaaaattccaataatagcatagaataattta |
30784266 |
T |
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