View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3913_low_9 (Length: 489)
Name: NF3913_low_9
Description: NF3913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3913_low_9 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 347; Significance: 0; HSPs: 25)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 15 - 474
Target Start/End: Original strand, 38453279 - 38453729
Alignment:
| Q |
15 |
ggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtaccgaccaagattgaaaagaggattcgag |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38453279 |
ggttggatttttccaccataggtaatcatgaacttgactctctccatcgtttgaaagt--tttgagagggtaccgaccaagattgaaaagaggattcgag |
38453376 |
T |
 |
| Q |
115 |
aaaaagacttatgaaacttttgggattgggacgttctgnnnnnnnnnnnaactgtgtgatgtgaatatgtgaattgtgagctgttcaatatttataagta |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||| |||||||||||| |
|
|
| T |
38453377 |
aaaaagacttatgaaacttttgggattgggacgttctgtttttttttt-aactatgtgatgtgaatatgggaattgtgagcagttcagtatttataagta |
38453475 |
T |
 |
| Q |
215 |
tttgattaactgaatttcctaagtactagaattaataccacagacttatcctataagtatttgattaactatgattcaagtaaggcaatatatatagttg |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || ||||||||| ||||| |
|
|
| T |
38453476 |
tttgattaactgaatttcctaagtactagaattaatacca--gacatatcctataagtatttgattaactatgattcacgttaggcaatat----agttg |
38453569 |
T |
 |
| Q |
315 |
gattaactgaatttcccaaaaactaggggaatcagagagaatatatatgtattggattaacttatataagccatataacttatcaaatttacgtgaattc |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38453570 |
gattaactgaatttcccaaaaactaggggaatcagagagaatatatatgtattggattaacttatataagccatataacttatcaaatttacgtgaattc |
38453669 |
T |
 |
| Q |
415 |
taagtataagccatataacttatatcccattttgttttggaaaacttatcccatttatat |
474 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38453670 |
taagtataagccatataacttatatcccattttgttttggaaaacttatcccatttatat |
38453729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 171 - 474
Target Start/End: Complemental strand, 38169502 - 38169200
Alignment:
| Q |
171 |
tgatgtgaatatgtgaattgtgagctgttcaatatttataagtatttgattaactgaatttcctaagtactagaattaataccacagacttatcct---a |
267 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
38169502 |
tgatgtgaatatgtgaattgtgagcagttcagtatttataagtatttgattaactgaatttcctaagtactagaattaataccacagacttatcctccta |
38169403 |
T |
 |
| Q |
268 |
taagtatttgattaactatgattcaagtaaggcaatatatatagttggattaactgaatttcccaaaaactaggggaatcagagagaatatatatgtatt |
367 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38169402 |
taagtatttgattaactgtgattcacgtaaggcaatata----gttggattaactgaatttcccaaaaactaggggaatcagagagaatatatatgtatt |
38169307 |
T |
 |
| Q |
368 |
ggattaacttatataagccatataacttatcaaatttacgtgaattctaagtataagccatataacttatatcccattttgttttggaaaacttatccca |
467 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38169306 |
ggattaacttatataagccatgtaacttatcaaatttacgtgaattctaagtataagccatataacttatatcccattttgtttttgaaaacttatccca |
38169207 |
T |
 |
| Q |
468 |
tttatat |
474 |
Q |
| |
|
||||||| |
|
|
| T |
38169206 |
tttatat |
38169200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 171 - 474
Target Start/End: Original strand, 38197602 - 38197904
Alignment:
| Q |
171 |
tgatgtgaatatgtgaattgtgagctgttcaatatttataagtatttgattaactgaatttcctaagtactagaattaataccacagacttatcct---a |
267 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
38197602 |
tgatgtgaatatgtgaattgtgagcagttcagtatttataagtatttgattaactgaatttcctaagtactagaattaataccacagacttatcctccta |
38197701 |
T |
 |
| Q |
268 |
taagtatttgattaactatgattcaagtaaggcaatatatatagttggattaactgaatttcccaaaaactaggggaatcagagagaatatatatgtatt |
367 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38197702 |
taagtatttgattaactgtgattcacgtaaggcaatat----agttggattaactgaatttcccaaaaactaggggaatcagagagaatatatatgtatt |
38197797 |
T |
 |
| Q |
368 |
ggattaacttatataagccatataacttatcaaatttacgtgaattctaagtataagccatataacttatatcccattttgttttggaaaacttatccca |
467 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38197798 |
ggattaacttatataagccatgtaacttatcaaatttacgtgaattctaagtataagccatataacttatatcccattttgtttttgaaaacttatccca |
38197897 |
T |
 |
| Q |
468 |
tttatat |
474 |
Q |
| |
|
||||||| |
|
|
| T |
38197898 |
tttatat |
38197904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 266 - 474
Target Start/End: Complemental strand, 38187997 - 38187793
Alignment:
| Q |
266 |
tataagtatttgattaactatgattcaagtaaggcaatatatatagttggattaactgaatttcccaaaaactaggggaatcagagagaatatatatgta |
365 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
38187997 |
tataagtatttgattaactgtgattcacgtaaggcaatata----gttggattaactgaatttcctaaaaactaggggaatcagagagaatatatatgta |
38187902 |
T |
 |
| Q |
366 |
ttggattaacttatataagccatataacttatcaaatttacgtgaattctaagtataagccatataacttatatcccattttgttttggaaaacttatcc |
465 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
38187901 |
ttggattaacttatataagccatgtaacttatcaaatttacgtgaattctaagtataagccatataacttatatcccattttgtttttgaaaacttatcc |
38187802 |
T |
 |
| Q |
466 |
catttatat |
474 |
Q |
| |
|
||||||||| |
|
|
| T |
38187801 |
catttatat |
38187793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 266 - 474
Target Start/End: Original strand, 38210360 - 38210564
Alignment:
| Q |
266 |
tataagtatttgattaactatgattcaagtaaggcaatatatatagttggattaactgaatttcccaaaaactaggggaatcagagagaatatatatgta |
365 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
38210360 |
tataagtatttgattaactgtgattcacgtaaggcaatat----agttggattaactgaatttcctaaaaactaggggaatcagagagaatatatatgta |
38210455 |
T |
 |
| Q |
366 |
ttggattaacttatataagccatataacttatcaaatttacgtgaattctaagtataagccatataacttatatcccattttgttttggaaaacttatcc |
465 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
38210456 |
ttggattaacttatataagccatgtaacttatcaaatttacgtgaattctaagtataagccatataacttatatcccattttgtttttgaaaacttatcc |
38210555 |
T |
 |
| Q |
466 |
catttatat |
474 |
Q |
| |
|
||||||||| |
|
|
| T |
38210556 |
catttatat |
38210564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 38182962 - 38183068
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtaccgaccaagattgaaaagagg |
107 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
38182962 |
aagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactg----agagtgaaaagagg |
38183057 |
T |
 |
| Q |
108 |
attcgagaaaa |
118 |
Q |
| |
|
|||||||||| |
|
|
| T |
38183058 |
gttcgagaaaa |
38183068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 38183318 - 38183212
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtaccgaccaagattgaaaagagg |
107 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
38183318 |
aagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactg----agagtgaaaagagg |
38183223 |
T |
 |
| Q |
108 |
attcgagaaaa |
118 |
Q |
| |
|
|||||||||| |
|
|
| T |
38183222 |
gttcgagaaaa |
38183212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 38188169 - 38188063
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtaccgaccaagattgaaaagagg |
107 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
38188169 |
aagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactg----agagtgaaaagagg |
38188074 |
T |
 |
| Q |
108 |
attcgagaaaa |
118 |
Q |
| |
|
|||||||||| |
|
|
| T |
38188073 |
gttcgagaaaa |
38188063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 38210188 - 38210294
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtaccgaccaagattgaaaagagg |
107 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
38210188 |
aagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactg----agagtgaaaagagg |
38210283 |
T |
 |
| Q |
108 |
attcgagaaaa |
118 |
Q |
| |
|
|||||||||| |
|
|
| T |
38210284 |
gttcgagaaaa |
38210294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 38215039 - 38215145
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtaccgaccaagattgaaaagagg |
107 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
38215039 |
aagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactg----agagtgaaaagagg |
38215134 |
T |
 |
| Q |
108 |
attcgagaaaa |
118 |
Q |
| |
|
|||||||||| |
|
|
| T |
38215135 |
gttcgagaaaa |
38215145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 38169638 - 38169559
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtac |
87 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
38169638 |
aagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgtttagagagggtac |
38169559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 38197466 - 38197545
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtac |
87 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
38197466 |
aagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgtttagagagggtac |
38197545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 38185427 - 38185321
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtaccgaccaagattgaaaagagg |
107 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | ||| |||||| ||| |
|
|
| T |
38185427 |
aagcctaggttggatttttgcaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtactg----agagtgaaaatagg |
38185332 |
T |
 |
| Q |
108 |
attcgagaaaa |
118 |
Q |
| |
|
||||||||||| |
|
|
| T |
38185331 |
attcgagaaaa |
38185321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 38212930 - 38213036
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtaccgaccaagattgaaaagagg |
107 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | ||| |||||| ||| |
|
|
| T |
38212930 |
aagcctaggttggatttttgcaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtactg----agagtgaaaatagg |
38213025 |
T |
 |
| Q |
108 |
attcgagaaaa |
118 |
Q |
| |
|
||||||||||| |
|
|
| T |
38213026 |
attcgagaaaa |
38213036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 38215394 - 38215316
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggtac |
87 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
38215394 |
aagcctaggttggatttt-ccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtac |
38215316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 38443223 - 38443145
Alignment:
| Q |
8 |
aagcataggttggatttttccaccataggtaatcatgagcttgactctcttcatcgtttgaaagtgttttgagagggta |
86 |
Q |
| |
|
|||| |||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38443223 |
aagcctaggttggatttctccaccataagtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggta |
38443145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 38188040 - 38187978
Alignment:
| Q |
164 |
aactgtgtgatgtgaatatgtgaattgtgagctgttcaatatttataagtatttgattaactg |
226 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
38188040 |
aactatgtgatgtgaatatgtgaattgtgagcagttcagtatttataagtatttgattaactg |
38187978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 38210317 - 38210379
Alignment:
| Q |
164 |
aactgtgtgatgtgaatatgtgaattgtgagctgttcaatatttataagtatttgattaactg |
226 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
38210317 |
aactatgtgatgtgaatatgtgaattgtgagcagttcagtatttataagtatttgattaactg |
38210379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 38185298 - 38185239
Alignment:
| Q |
174 |
tgtgaatatgtgaattgtgagctgttcaatatttataagtatttgattaactgaatttcc |
233 |
Q |
| |
|
|||||||| ||||||||||||| || |||||||||||||||||| ||||||||||||||| |
|
|
| T |
38185298 |
tgtgaatacgtgaattgtgagcagtccaatatttataagtatttaattaactgaatttcc |
38185239 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 38213059 - 38213118
Alignment:
| Q |
174 |
tgtgaatatgtgaattgtgagctgttcaatatttataagtatttgattaactgaatttcc |
233 |
Q |
| |
|
|||||||| ||||||||||||| || |||||||||||||||||| ||||||||||||||| |
|
|
| T |
38213059 |
tgtgaatacgtgaattgtgagcagtccaatatttataagtatttaattaactgaatttcc |
38213118 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 355
Target Start/End: Complemental strand, 38185253 - 38185214
Alignment:
| Q |
316 |
attaactgaatttcccaaaaactaggggaatcagagagaa |
355 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
38185253 |
attaactgaatttcccaaaaactaggagaattagagagaa |
38185214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 355
Target Start/End: Original strand, 38213104 - 38213143
Alignment:
| Q |
316 |
attaactgaatttcccaaaaactaggggaatcagagagaa |
355 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
38213104 |
attaactgaatttcccaaaaactaggagaattagagagaa |
38213143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 38183091 - 38183133
Alignment:
| Q |
164 |
aactgtgtgatgtgaatatgtgaattgtgagctgttcaatatt |
206 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
38183091 |
aactatgtgatgtgaatatgtgaattgtgagcagttcagtatt |
38183133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 38215266 - 38215224
Alignment:
| Q |
164 |
aactgtgtgatgtgaatatgtgaattgtgagctgttcaatatt |
206 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
38215266 |
aactatgtgatgtgaatatgtgaattgtgagcagttcagtatt |
38215224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 38443079 - 38443027
Alignment:
| Q |
180 |
tatgtgaattgtgagctgttcaatatttataagtatttgattaactgaatttcc |
233 |
Q |
| |
|
||||||||||||||| | ||||| ||||||| |||||| ||||||||||||||| |
|
|
| T |
38443079 |
tatgtgaattgtgagatattcaa-atttatatgtatttcattaactgaatttcc |
38443027 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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