View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3917_high_7 (Length: 269)
Name: NF3917_high_7
Description: NF3917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3917_high_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 10 - 269
Target Start/End: Complemental strand, 13114745 - 13114487
Alignment:
| Q |
10 |
agcagcagagaggggtgacgcaaaaccaaattaattaccactgggatggatatccctggctggtataaatatacatacaccaagaacaaacacaggtttt |
109 |
Q |
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| T |
13114745 |
agcaacagagaggggtgacgcaaaaccaaattaattaccactgggatggatatccctggctggtataaatatacatacaccaagaacaaacacaggtttt |
13114646 |
T |
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| Q |
110 |
tattgtcaacttgtaatttgaaaagctcttaaaatacagatacaccatatttatctatctactttaagaaaagttttcttataataacatgtgatacatt |
209 |
Q |
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| T |
13114645 |
tattgtcaacttgtaatttgaaaagctcttaaaatacagatacaccatatttatctatctactttaagaaaagttttcttataataacatgtgatacatt |
13114546 |
T |
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| Q |
210 |
ttcgcatgtctttttctaccttgtgctgccctagattcgtgcaaagagcacgatattttt |
269 |
Q |
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| T |
13114545 |
ttcgcatgtctttttctaccttgt-ctgccctagattcgtgcaaagagcacgatattttt |
13114487 |
T |
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