View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3917_low_20 (Length: 212)

Name: NF3917_low_20
Description: NF3917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3917_low_20
NF3917_low_20
[»] chr3 (44 HSPs)
chr3 (52-197)||(46003994-46004138)
chr3 (1-53)||(1835082-1835134)
chr3 (6-53)||(34045340-34045387)
chr3 (1-51)||(41844453-41844503)
chr3 (6-51)||(2968019-2968064)
chr3 (6-51)||(46388892-46388937)
chr3 (138-197)||(45999103-45999160)
chr3 (6-51)||(16444542-16444587)
chr3 (6-51)||(29008820-29008865)
chr3 (6-51)||(34051440-34051485)
chr3 (6-51)||(42904276-42904321)
chr3 (6-51)||(46702119-46702164)
chr3 (6-51)||(49144550-49144595)
chr3 (1-52)||(12898775-12898826)
chr3 (1-51)||(19988394-19988444)
chr3 (1-51)||(35743352-35743402)
chr3 (1-46)||(8161059-8161104)
chr3 (6-51)||(35743674-35743719)
chr3 (6-51)||(46406718-46406763)
chr3 (6-51)||(46697645-46697690)
chr3 (6-51)||(49138515-49138560)
chr3 (6-51)||(50481477-50481522)
chr3 (6-51)||(54386067-54386112)
chr3 (6-47)||(54392122-54392163)
chr3 (6-46)||(3948667-3948707)
chr3 (7-51)||(4008417-4008461)
chr3 (1-51)||(12897759-12897809)
chr3 (1-51)||(26245270-26245320)
chr3 (1-51)||(27739655-27739705)
chr3 (1-51)||(28817089-28817139)
chr3 (6-52)||(30943122-30943168)
chr3 (1-51)||(34543224-34543274)
chr3 (1-51)||(50998768-50998818)
chr3 (6-51)||(2858050-2858095)
chr3 (6-51)||(2950267-2950312)
chr3 (6-47)||(3953309-3953350)
chr3 (6-51)||(4002675-4002720)
chr3 (6-47)||(6745420-6745461)
chr3 (6-47)||(8156446-8156487)
chr3 (1-54)||(16851058-16851111)
chr3 (1-46)||(30947743-30947788)
chr3 (6-51)||(41844083-41844128)
chr3 (7-51)||(3975666-3975710)
chr3 (1-53)||(19750101-19750153)
[»] chr8 (36 HSPs)
chr8 (1-51)||(184641-184691)
chr8 (1-51)||(36678018-36678068)
chr8 (6-51)||(489720-489765)
chr8 (6-51)||(42485632-42485677)
chr8 (6-51)||(25628-25673)
chr8 (6-53)||(26659386-26659433)
chr8 (1-52)||(27501534-27501585)
chr8 (1-51)||(15030818-15030868)
chr8 (1-51)||(22014524-22014574)
chr8 (6-52)||(22510481-22510527)
chr8 (1-51)||(28617503-28617553)
chr8 (1-51)||(45066450-45066500)
chr8 (6-51)||(1052492-1052537)
chr8 (6-51)||(2416137-2416182)
chr8 (6-51)||(22014180-22014225)
chr8 (1-46)||(30305633-30305678)
chr8 (1-46)||(32379011-32379056)
chr8 (1-46)||(32432966-32433011)
chr8 (6-52)||(21719-21765)
chr8 (1-51)||(915723-915773)
chr8 (1-51)||(2335236-2335286)
chr8 (6-52)||(23018618-23018664)
chr8 (13-51)||(23022388-23022426)
chr8 (1-51)||(28618524-28618574)
chr8 (1-51)||(31185533-31185583)
chr8 (1-51)||(32585078-32585128)
chr8 (1-51)||(43363348-43363398)
chr8 (6-51)||(184309-184354)
chr8 (1-46)||(7340005-7340050)
chr8 (6-47)||(7344651-7344692)
chr8 (1-50)||(15036791-15036840)
chr8 (6-51)||(22519689-22519734)
chr8 (6-51)||(26663127-26663172)
chr8 (6-47)||(32375589-32375630)
chr8 (6-51)||(36677646-36677691)
chr8 (6-46)||(17924040-17924080)
[»] chr7 (43 HSPs)
chr7 (1-51)||(10098206-10098256)
chr7 (1-51)||(618814-618864)
chr7 (6-51)||(15074322-15074367)
chr7 (6-51)||(35610509-35610554)
chr7 (6-51)||(42508121-42508166)
chr7 (1-51)||(7004-7054)
chr7 (1-51)||(12210678-12210728)
chr7 (6-52)||(20564006-20564052)
chr7 (1-51)||(42582050-42582100)
chr7 (1-51)||(45763313-45763363)
chr7 (1-51)||(46907474-46907524)
chr7 (6-51)||(603713-603758)
chr7 (6-51)||(10098267-10098312)
chr7 (6-51)||(17465807-17465852)
chr7 (6-51)||(17587362-17587407)
chr7 (6-51)||(20566453-20566498)
chr7 (6-51)||(27656973-27657018)
chr7 (1-46)||(30786485-30786530)
chr7 (6-51)||(41880448-41880493)
chr7 (6-51)||(46908566-46908611)
chr7 (6-47)||(48403310-48403351)
chr7 (6-54)||(18109868-18109916)
chr7 (1-51)||(8135-8185)
chr7 (1-51)||(10524445-10524495)
chr7 (1-51)||(13921352-13921402)
chr7 (1-47)||(40141315-40141361)
chr7 (1-51)||(42795168-42795218)
chr7 (12-46)||(43032912-43032946)
chr7 (6-52)||(43619638-43619684)
chr7 (1-51)||(49141706-49141756)
chr7 (6-47)||(9365584-9365625)
chr7 (6-51)||(10097850-10097895)
chr7 (6-51)||(10168352-10168397)
chr7 (6-51)||(10175877-10175922)
chr7 (6-51)||(16636336-16636381)
chr7 (6-51)||(17459257-17459302)
chr7 (6-51)||(17593912-17593957)
chr7 (6-51)||(18105307-18105352)
chr7 (6-47)||(30791102-30791143)
chr7 (6-51)||(41884220-41884265)
chr7 (6-51)||(48407415-48407460)
chr7 (7-51)||(7975704-7975748)
chr7 (1-53)||(17840978-17841030)
[»] chr4 (39 HSPs)
chr4 (1-51)||(52529147-52529197)
chr4 (1-51)||(54634104-54634154)
chr4 (1-51)||(37563369-37563419)
chr4 (6-51)||(49090381-49090426)
chr4 (6-54)||(13173165-13173213)
chr4 (1-51)||(21022976-21023026)
chr4 (6-51)||(1089678-1089723)
chr4 (6-51)||(6181885-6181930)
chr4 (6-51)||(13182192-13182237)
chr4 (6-51)||(30726835-30726880)
chr4 (6-51)||(41801031-41801076)
chr4 (13-51)||(1087794-1087832)
chr4 (1-51)||(14201615-14201665)
chr4 (1-51)||(26792333-26792383)
chr4 (1-51)||(26932518-26932568)
chr4 (1-51)||(55588372-55588422)
chr4 (6-47)||(9893358-9893399)
chr4 (6-51)||(30723055-30723100)
chr4 (6-51)||(31421640-31421685)
chr4 (6-51)||(39773635-39773680)
chr4 (6-51)||(40352300-40352345)
chr4 (6-51)||(40832581-40832626)
chr4 (6-51)||(41793265-41793310)
chr4 (6-51)||(49096445-49096490)
chr4 (6-51)||(49169191-49169236)
chr4 (6-50)||(1309208-1309252)
chr4 (1-52)||(46253420-46253471)
chr4 (1-51)||(7485749-7485799)
chr4 (1-51)||(23220613-23220663)
chr4 (1-51)||(51037556-51037606)
chr4 (1-51)||(55587293-55587343)
chr4 (6-47)||(6175785-6175826)
chr4 (6-51)||(7484665-7484710)
chr4 (6-51)||(23221760-23221805)
chr4 (6-51)||(31425412-31425457)
chr4 (6-51)||(37562999-37563044)
chr4 (1-46)||(49566539-49566584)
chr4 (6-51)||(54633746-54633791)
chr4 (6-51)||(55799654-55799699)
[»] chr2 (43 HSPs)
chr2 (1-51)||(38945696-38945746)
chr2 (1-51)||(44100636-44100686)
chr2 (6-51)||(17420502-17420547)
chr2 (6-51)||(39793897-39793942)
chr2 (6-51)||(39800746-39800791)
chr2 (6-51)||(42505856-42505901)
chr2 (6-54)||(43978467-43978515)
chr2 (1-51)||(10424774-10424824)
chr2 (6-51)||(15831061-15831106)
chr2 (6-51)||(30497043-30497088)
chr2 (6-51)||(42499687-42499732)
chr2 (6-51)||(43619236-43619281)
chr2 (1-48)||(22003490-22003537)
chr2 (7-54)||(26543235-26543282)
chr2 (1-51)||(20937832-20937882)
chr2 (1-51)||(39951238-39951288)
chr2 (1-46)||(213542-213587)
chr2 (6-47)||(3935768-3935809)
chr2 (6-47)||(3940823-3940864)
chr2 (6-51)||(5355625-5355670)
chr2 (1-46)||(10624555-10624600)
chr2 (6-51)||(17426492-17426537)
chr2 (6-51)||(30493293-30493338)
chr2 (6-51)||(43536036-43536081)
chr2 (6-53)||(5351895-5351943)
chr2 (1-52)||(21998147-21998198)
chr2 (1-48)||(30803106-30803153)
chr2 (1-51)||(20951134-20951184)
chr2 (1-51)||(29074091-29074141)
chr2 (1-51)||(39033033-39033083)
chr2 (6-47)||(208948-208989)
chr2 (1-46)||(5334515-5334560)
chr2 (6-47)||(5351826-5351867)
chr2 (6-51)||(7267538-7267583)
chr2 (6-51)||(15835305-15835350)
chr2 (1-46)||(18003362-18003407)
chr2 (6-51)||(24749620-24749665)
chr2 (6-51)||(28468575-28468620)
chr2 (6-47)||(43984428-43984469)
chr2 (6-51)||(44100892-44100937)
chr2 (6-51)||(45428550-45428595)
chr2 (6-54)||(7262967-7263015)
chr2 (7-51)||(39947534-39947578)
[»] scaffold0101 (1 HSPs)
scaffold0101 (6-51)||(41150-41195)
[»] chr6 (14 HSPs)
chr6 (6-51)||(27616649-27616694)
chr6 (1-52)||(6760960-6761011)
chr6 (1-51)||(26711983-26712032)
chr6 (6-51)||(11694154-11694199)
chr6 (1-51)||(13382563-13382613)
chr6 (1-46)||(1612837-1612882)
chr6 (6-51)||(11688048-11688093)
chr6 (6-51)||(30825984-30826029)
chr6 (6-47)||(30829745-30829786)
chr6 (1-51)||(18346975-18347025)
chr6 (6-52)||(18351737-18351783)
chr6 (6-51)||(6207187-6207232)
chr6 (1-50)||(8707917-8707966)
chr6 (6-51)||(27641845-27641890)
[»] chr5 (15 HSPs)
chr5 (6-51)||(19041211-19041256)
chr5 (1-51)||(27659874-27659924)
chr5 (6-51)||(11027029-11027074)
chr5 (6-51)||(11033556-11033601)
chr5 (6-51)||(28241893-28241938)
chr5 (6-51)||(38860262-38860307)
chr5 (1-51)||(37820936-37820986)
chr5 (1-46)||(14279788-14279833)
chr5 (6-51)||(19035139-19035184)
chr5 (6-51)||(37814516-37814561)
chr5 (7-51)||(13837658-13837702)
chr5 (6-42)||(28886487-28886523)
chr5 (1-51)||(8580568-8580618)
chr5 (6-51)||(28238073-28238118)
chr5 (6-51)||(38853413-38853458)
[»] chr1 (31 HSPs)
chr1 (6-51)||(3732447-3732492)
chr1 (6-51)||(19924689-19924734)
chr1 (6-51)||(13629338-13629383)
chr1 (6-51)||(30889995-30890040)
chr1 (1-54)||(38633242-38633295)
chr1 (1-51)||(586693-586743)
chr1 (6-51)||(3728669-3728714)
chr1 (1-46)||(3983025-3983070)
chr1 (6-51)||(8473717-8473762)
chr1 (6-51)||(8548763-8548808)
chr1 (6-51)||(19928939-19928984)
chr1 (1-46)||(20349396-20349441)
chr1 (6-51)||(26879389-26879434)
chr1 (1-46)||(31945951-31945996)
chr1 (1-46)||(38776216-38776261)
chr1 (1-52)||(30195472-30195523)
chr1 (1-52)||(43012733-43012784)
chr1 (1-51)||(4883168-4883218)
chr1 (1-51)||(19914401-19914451)
chr1 (6-52)||(26875626-26875672)
chr1 (6-52)||(38771562-38771608)
chr1 (1-51)||(43011762-43011812)
chr1 (1-51)||(47652662-47652712)
chr1 (6-51)||(2365169-2365214)
chr1 (6-47)||(3993937-3993978)
chr1 (6-47)||(20354029-20354070)
chr1 (6-47)||(20556836-20556877)
chr1 (6-51)||(22397754-22397799)
chr1 (6-51)||(30905705-30905750)
chr1 (6-51)||(44621211-44621256)
chr1 (1-53)||(22528686-22528738)
[»] scaffold0014 (1 HSPs)
scaffold0014 (6-51)||(84481-84526)
[»] scaffold1606 (1 HSPs)
scaffold1606 (6-52)||(55-101)
[»] scaffold0494 (2 HSPs)
scaffold0494 (1-51)||(11542-11592)
scaffold0494 (6-51)||(765-810)
[»] scaffold0260 (1 HSPs)
scaffold0260 (1-46)||(11719-11764)
[»] scaffold0293 (1 HSPs)
scaffold0293 (6-48)||(816-858)
[»] scaffold0094 (1 HSPs)
scaffold0094 (1-51)||(246-296)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-51)||(68349-68399)
scaffold0016 (1-51)||(69309-69359)
[»] scaffold0744 (1 HSPs)
scaffold0744 (6-51)||(516-561)
[»] scaffold0116 (1 HSPs)
scaffold0116 (6-51)||(11235-11280)
[»] scaffold0634 (1 HSPs)
scaffold0634 (7-51)||(7352-7396)
[»] scaffold0199 (1 HSPs)
scaffold0199 (1-53)||(10585-10637)


Alignment Details
Target: chr3 (Bit Score: 120; Significance: 1e-61; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 52 - 197
Target Start/End: Original strand, 46003994 - 46004138
Alignment:
Q  52 catcaggtatgcatcccttaggcgcagacaacacttttccagcaacaatcccaagactgc-tgctccaatatagggaacccctccaatgtcatccttttt 150  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46003994 catcaggtatgcatcccttaggcgcagacgacacttttctagcaacaatcccaagactgcttgctccaatatagggaacccctccaatgtcatccttttt 46004093  T
Q  151 gctatgatacgcaatggcattgcataattcatcttgtgtgcatattc 197  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||    
T  46004094 gctatgata--caatggcattgcataattcatcttgtgtgcatattc 46004138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1835134 - 1835082
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcca 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1835134 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcca 1835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 34045387 - 34045340
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcca 53  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34045387 ttactcgtgtggcacagccatactatatgtgggaacagcaattctcca 34045340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41844453 - 41844503
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  41844453 gtaacttactcgtgtggcacagccataccatatgtaggaacaacaattctc 41844503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 2968019 - 2968064
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  2968019 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 2968064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 46388937 - 46388892
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  46388937 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 46388892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 45999103 - 45999160
Alignment:
Q  138 tgtcatcctttttgctatgatacgcaatggcattgcataattcatcttgtgtgcatattc 197  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||    
T  45999103 tgtcatcctttttgctctgatac--aatggcattgcataattcatcttctgtgcatattc 45999160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 16444587 - 16444542
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  16444587 ttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 16444542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 29008865 - 29008820
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  29008865 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 29008820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 34051440 - 34051485
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  34051440 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 34051485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 42904276 - 42904321
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  42904276 ttactggtgtggcacagccatactatatgtgggaacagcaattctc 42904321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 46702119 - 46702164
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  46702119 ttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 46702164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 49144550 - 49144595
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  49144550 ttactcgtgtgacacagccatactatatgtgggaacagcaattctc 49144595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12898775 - 12898826
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||| |||||||||||||| ||||| |||| |||||||||||||||||||||    
T  12898775 gtaaattactcgtgtggcatagccaaaccaaatgtgggaacagcaattctcc 12898826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19988444 - 19988394
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||||| ||||||||||||||    
T  19988444 gtaatttactcgtgtggcacagccaaaccaaatgtgagaacagcaattctc 19988394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35743402 - 35743352
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||||||||||| |||||| | |||| ||||||||    
T  35743402 gtaacttactcgtgtggcacagccatactatatgtagcaacaacaattctc 35743352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8161059 - 8161104
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  8161059 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 8161104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 35743674 - 35743719
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  35743674 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 35743719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 46406718 - 46406763
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||    
T  46406718 ttactcgtgtgacacagccaaactatatgtgggaacagcaattctc 46406763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 46697690 - 46697645
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  46697690 ttactcgtgtggcacagccaaacaagatgtgggaacagcaattctc 46697645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 49138560 - 49138515
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||    
T  49138560 ttactcatgtggcacagccaaactatatgtgggaacagcaattctc 49138515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 50481477 - 50481522
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||    
T  50481477 ttactggtgtggcacaaccatactatatgtgggaacagcaattctc 50481522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 54386112 - 54386067
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  54386112 ttactcgtgtggcacagccatactatatgtgagaagagcaattctc 54386067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 54392122 - 54392163
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  54392122 ttactcgtgtggcacagccaaactatatgtgggaacagcaat 54392163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 3948707 - 3948667
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  3948707 ttactggtgtggcacagccatactatatgtgggaacagcaa 3948667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 4008417 - 4008461
Alignment:
Q  7 tactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||    
T  4008417 tactcgtgtggcacggccaaaccaaatgtgggaacagcaattctc 4008461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12897809 - 12897759
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  12897809 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 12897759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26245320 - 26245270
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||||| || | ||||||||| ||||||||    
T  26245320 gtaatttactcgtgtggcacagccatatcaaaagtgggaacaacaattctc 26245270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27739655 - 27739705
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  27739655 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 27739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28817089 - 28817139
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  28817089 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctc 28817139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 30943168 - 30943122
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||||||||||||||||||| || | |||||||||||||||| ||||    
T  30943168 ttactcgtgtggcacagccaaacaacatgtgggaacagcaatactcc 30943122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34543224 - 34543274
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||| ||||||||||||| |||| ||||||||||| ||||||||    
T  34543224 gtaatttactcatgtggcacagccaaaccaaatgtgggaacaacaattctc 34543274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50998768 - 50998818
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||| ||||||| ||||||||    
T  50998768 gtaatttactcgtgtggcacagccaaaccaaatgcgggaacaacaattctc 50998818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 2858050 - 2858095
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  2858050 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 2858095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 2950312 - 2950267
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||| |||| ||| || ||||||||||||||||||||||    
T  2950312 ttactcgtgtgacacaaccaaactatatgtgggaacagcaattctc 2950267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 3953309 - 3953350
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  3953309 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 3953350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 4002720 - 4002675
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| |||| ||||||||||| ||| ||||    
T  4002720 ttactcgtgtggcacagccaaaccaaatgtgggaacaacaactctc 4002675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 6745420 - 6745461
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  6745420 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 6745461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 8156487 - 8156446
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  8156487 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 8156446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16851111 - 16851058
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctccat 54  Q
    |||| |||||||||||||| ||||| || | ||||||||||| |||||||||||    
T  16851111 gtaaattactcgtgtggcatagccaaactaaatgtgggaacaacaattctccat 16851058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30947743 - 30947788
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| |||||||||| |||||| |||||||||||||||||    
T  30947743 gtaaattactggtgtggcacaaccatactatatgtgggaacagcaa 30947788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 41844128 - 41844083
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||    
T  41844128 ttactcgtgtggcacagccaaacaacatgtgggaagagcaattctc 41844083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 3975710 - 3975666
Alignment:
Q  7 tactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||| |||| ||||||| ||| ||||||||    
T  3975710 tactcgtgtggcacagccaaaccaaatgtgggtacaacaattctc 3975666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19750101 - 19750153
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcca 53  Q
    |||| ||||||| |||||||||||| |||| | ||||||||| ||||||||||    
T  19750101 gtaatttactcgcgtggcacagccaaaccaaaagtgggaacaacaattctcca 19750153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 184641 - 184691
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  184641 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 184691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36678018 - 36678068
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36678018 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 36678068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 489720 - 489765
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  489720 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 489765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 42485632 - 42485677
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42485632 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 42485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 25628 - 25673
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  25628 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 25673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 26659433 - 26659386
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcca 53  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  26659433 ttactggtgtggcacagccatactatatgtgggaacagcaattgtcca 26659386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27501585 - 27501534
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||| |||||||||||||||||||| |||| | |||||||||||||||||||    
T  27501585 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacagcaattctcc 27501534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15030868 - 15030818
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  15030868 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 15030818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22014524 - 22014574
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  22014524 gtaatttactcgtgtggcacagccataccatacgtgcgaagagcaattctc 22014574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 22510527 - 22510481
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    ||||||||||||||||||||||| ||||||| |||||||||| ||||    
T  22510527 ttactcgtgtggcacagccatactatatgtgagaacagcaatactcc 22510481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28617553 - 28617503
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||||||||||||    
T  28617553 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacagcaattctc 28617503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45066450 - 45066500
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  45066450 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 45066500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 1052537 - 1052492
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||    
T  1052537 ttactggtgtggcacatccatactatatgtgggaacagcaattctc 1052492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 2416182 - 2416137
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  2416182 ttacttgtgtggcacagccatactatatgtgggaacaacaattctc 2416137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 22014225 - 22014180
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  22014225 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 22014180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30305633 - 30305678
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  30305633 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 30305678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32379011 - 32379056
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  32379011 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 32379056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32432966 - 32433011
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  32432966 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 32433011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 21765 - 21719
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||||||||||||||||||| || | ||||||||||| |||||||||    
T  21765 ttactcgtgtggcacagccaaacaagatgtgggaacaacaattctcc 21719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 915723 - 915773
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  915723 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 915773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2335236 - 2335286
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| || | ||||||||||| ||||||||    
T  2335236 gtaatttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 2335286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 23018664 - 23018618
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||||||||||||||||||| || | |||||| ||||||||||||||    
T  23018664 ttactcgtgtggcacagccaaacaagatgtggaaacagcaattctcc 23018618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 23022388 - 23022426
Alignment:
Q  13 tgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  23022388 tgtggcacagccatactatatgtgggaacaacaattctc 23022426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28618524 - 28618574
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||| |||||||| ||||| |||| ||||||||||||||||||||    
T  28618524 gtaaattacttgtgtggcatagccaaaccaaatgtgggaacagcaattctc 28618574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31185533 - 31185583
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  31185533 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 31185583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32585078 - 32585128
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||| ||||| |||| ||||||||| ||||||||||    
T  32585078 gtaatttactcgtgtggcatagccaaaccaaatgtgggaatagcaattctc 32585128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43363348 - 43363398
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  43363348 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctc 43363398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 184354 - 184309
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  184354 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 184309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7340050 - 7340005
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  7340050 gtaaattactggtgtggcacagccatactatatgtggaaacagcaa 7340005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 7344651 - 7344692
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  7344651 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 7344692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15036791 - 15036840
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattct 50  Q
    |||| |||||||||||||||||||| || || |||||||||| |||||||    
T  15036791 gtaatttactcgtgtggcacagccaaactatgtgtgggaacaacaattct 15036840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 22519689 - 22519734
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| ||| || |||||||||||||| |||||||    
T  22519689 ttactcgtgtggcacaaccaaactatatgtgggaacagtaattctc 22519734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 26663127 - 26663172
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||    
T  26663127 ttactcgtgtggcacagccaaacaaaatgtgggaatagcaattctc 26663172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 32375630 - 32375589
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  32375630 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 32375589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 36677691 - 36677646
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  36677691 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 36677646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 17924080 - 17924040
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||||||||||||||||||| || | |||||||||||||||    
T  17924080 ttactcgtgtggcacagccaaacaacatgtgggaacagcaa 17924040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10098206 - 10098256
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10098206 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 10098256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 618814 - 618864
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  618814 gtaaattactcgtgtggcacagccatactatatgtgggaagagcaattctc 618864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 15074322 - 15074367
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  15074322 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 15074367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 35610509 - 35610554
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  35610509 ttactggtgtggcacagccatactatatgtgggaacagcaattctc 35610554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 42508121 - 42508166
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  42508121 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 42508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7054 - 7004
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| || | ||||||||||||||||||||    
T  7054 gtaatttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12210678 - 12210728
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||| ||||||||||| |||| ||||||||||||||||||||    
T  12210678 gtaatttactcgtatggcacagccaaaccaaatgtgggaacagcaattctc 12210728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 20564052 - 20564006
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||    
T  20564052 ttactcgtatggcacaaccatactatatgtgggaacagcaattctcc 20564006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42582100 - 42582050
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  42582100 gtaatttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 42582050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45763363 - 45763313
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  45763363 gtaaattactggtgtggcacagccatactatatgtgggaacagcaaatctc 45763313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46907524 - 46907474
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  46907524 gtaatttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 46907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 603758 - 603713
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  603758 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 603713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 10098312 - 10098267
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||    
T  10098312 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 10098267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 17465807 - 17465852
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  17465807 ttactggtgtggcacagccatactatatgtgggaacatcaattctc 17465852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 17587407 - 17587362
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  17587407 ttactggtgtggcacagccatactatatgtgggaacatcaattctc 17587362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 20566453 - 20566498
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||    
T  20566453 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 20566498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 27657018 - 27656973
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||    
T  27657018 ttactcgtgtggcacaaccaaaccaaatgtgggaacagcaattctc 27656973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30786530 - 30786485
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  30786530 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 30786485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 41880493 - 41880448
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||    
T  41880493 ttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 41880448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 46908566 - 46908611
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||    
T  46908566 ttactcgtgtggcacagccaaaccaaaagtgggaacagcaattctc 46908611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 48403351 - 48403310
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  48403351 ttactggtgtggcacagccatactatatgtgggaacagcaat 48403310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 18109868 - 18109916
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctccat 54  Q
    |||||||||| ||||||||| |||| ||||||||||| |||||||||||    
T  18109868 ttactcgtgtagcacagccaaaccaaatgtgggaacaacaattctccat 18109916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8135 - 8185
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||| |||||||||||||| || | ||||||||||||||||||||    
T  8135 gtaatttacttgtgtggcacagccaaacaacatgtgggaacagcaattctc 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10524445 - 10524495
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||||    
T  10524445 gtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 10524495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13921352 - 13921402
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  13921352 gtaatttactcgtgtggcacaaccaaaccaaatgtgggaacaacaattctc 13921402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40141315 - 40141361
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||| |||||||||||||||||||| || ||||||||||||| ||||    
T  40141315 gtaatttactcgtgtggcacagccaaactatatgtgggaacaacaat 40141361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42795168 - 42795218
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  42795168 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 42795218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 43032946 - 43032912
Alignment:
Q  12 gtgtggcacagccataccatatgtgggaacagcaa 46  Q
    ||||||||||||||||| |||||||||||||||||    
T  43032946 gtgtggcacagccatactatatgtgggaacagcaa 43032912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 43619684 - 43619638
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||||||||||||||||||| || | |||||||||||||||| ||||    
T  43619684 ttactcgtgtggcacagccaaacaacatgtgggaacagcaatcctcc 43619638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49141706 - 49141756
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  49141706 gtaatttactcgtgtggcatagccaaaccaaatgtgggaacaacaattctc 49141756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 9365625 - 9365584
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || |||||| |||||||||||    
T  9365625 ttactcgtgtggcacagccaaactatatgtaggaacagcaat 9365584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 10097895 - 10097850
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  10097895 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 10097850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 10168352 - 10168397
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  10168352 ttactcgtgtagcacatccatactatatgtgggaacaacaattctc 10168397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 10175877 - 10175922
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  10175877 ttactcgtgtagcacatccatactatatgtgggaacaacaattctc 10175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 16636336 - 16636381
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  16636336 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 16636381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 17459302 - 17459257
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  17459302 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 17459257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 17593912 - 17593957
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  17593912 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 17593957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 18105352 - 18105307
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||| || ||||||| ||||||||||||| ||||||||    
T  18105352 ttactcgtgtggtacggccatactatatgtgggaacaacaattctc 18105307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 30791102 - 30791143
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  30791102 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 30791143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 41884220 - 41884265
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||    
T  41884220 ttactcgtgtggcacagccacacaacatgtgggaatagcaattctc 41884265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 48407415 - 48407460
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||    
T  48407415 ttactcgtgtggcacagccaaacaacatgtgggaagagcaattctc 48407460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 7975704 - 7975748
Alignment:
Q  7 tactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  7975704 tactcgtgtggcacaaccaaaccaaatgtgggaacaacaattctc 7975748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17840978 - 17841030
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcca 53  Q
    |||| |||||||||||||||||||| | || | ||||||| ||||||||||||    
T  17840978 gtaatttactcgtgtggcacagccaaatcaaacgtgggaatagcaattctcca 17841030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52529197 - 52529147
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52529197 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 52529147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 54634104 - 54634154
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54634104 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 54634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37563369 - 37563419
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37563369 gtaacttactcgtgtggcacagccttaccatatgtgggaacagcaattctc 37563419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 49090426 - 49090381
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  49090426 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 49090381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 13173213 - 13173165
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctccat 54  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  13173213 ttactcgtgtggcacagccatactatatgtgggaacatcaattctccat 13173165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21022976 - 21023026
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  21022976 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 21023026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 1089678 - 1089723
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  1089678 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 1089723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 6181885 - 6181930
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  6181885 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 6181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 13182192 - 13182237
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  13182192 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 13182237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 30726835 - 30726880
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  30726835 ttactcgtgtggcacatccatactatatgtgggaacagcaattctc 30726880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 41801031 - 41801076
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  41801031 ttactcgtgtgacacagccatactatatgtgggaacagcaattctc 41801076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 1087832 - 1087794
Alignment:
Q  13 tgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  1087832 tgtggcacagccatactatatgtgggaacagcaattctc 1087794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14201615 - 14201665
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  14201615 gtaatttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 14201665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26792333 - 26792383
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  26792333 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 26792383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26932568 - 26932518
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||||||||    
T  26932568 gtaatttactcgtgtgacacagccaaactatatgtgggaacagcaattctc 26932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 55588372 - 55588422
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  55588372 gtaaattactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 55588422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 9893358 - 9893399
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  9893358 ttacttgtgtggcacagccatactatatgtgggaacagcaat 9893399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 30723100 - 30723055
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  30723100 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 30723055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 31421685 - 31421640
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||||    
T  31421685 ttactggtgtggcacagccatactatatgtgagaacagcaattctc 31421640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 39773635 - 39773680
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  39773635 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 39773680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 40352345 - 40352300
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||    
T  40352345 ttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 40352300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 40832626 - 40832581
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  40832626 ttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 40832581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 41793310 - 41793265
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||    
T  41793310 ttactcgtatggcacagccaaactatatgtgggaacagcaattctc 41793265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 49096445 - 49096490
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| ||| || ||||||||||||||||||||||    
T  49096445 ttactcgtgtggcacaaccaaactatatgtgggaacagcaattctc 49096490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 49169191 - 49169236
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  49169191 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 49169236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 1309208 - 1309252
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattct 50  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||    
T  1309208 ttactcgtgtggcacaaccatactatatgtgggagcagcaattct 1309252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 46253471 - 46253420
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||| |||||||||||||||| ||| || |||||||||||||| ||||||||    
T  46253471 gtaatttactcgtgtggcacaaccaaactatatgtgggaacagtaattctcc 46253420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7485749 - 7485799
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  7485749 gtaaattactcgtgtggcatagccaaaccaaatgtgggaacaacaattctc 7485799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23220663 - 23220613
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  23220663 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 23220613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51037556 - 51037606
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| || | ||||||||||| ||||||||    
T  51037556 gtaatttactcgtgtggcacagccaaactaaatgtgggaacaacaattctc 51037606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 55587343 - 55587293
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  55587343 gtaaattactcgtgtggcatagccaaaccaaatgtgggaacaacaattctc 55587293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 6175826 - 6175785
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || ||||||||||||| ||||    
T  6175826 ttactcgtgtggcacagccaaactatatgtgggaacaacaat 6175785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 7484710 - 7484665
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  7484710 ttactcgtgtggcatagccaaaccaaatgtgggaacatcaattctc 7484665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 23221760 - 23221805
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  23221760 ttactcgtgtggcatagccaaaccaaatgtgggaacaacaattctc 23221805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 31425412 - 31425457
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  31425412 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 31425457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 37563044 - 37562999
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||| |||||||| || | ||||||||||||||||||||    
T  37563044 ttactcgtgtgacacagccaaacaacatgtgggaacagcaattctc 37562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49566539 - 49566584
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| |||||||||| |||||| |||||||||||||||||    
T  49566539 gtaaattactggtgtggcacaaccatactatatgtgggaacagcaa 49566584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 54633791 - 54633746
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||| || || | ||||||||||||||||||||    
T  54633791 ttactcgtgtggcacagtcaaacaacatgtgggaacagcaattctc 54633746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 55799654 - 55799699
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  55799654 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 55799699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38945746 - 38945696
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  38945746 gtaaattactcgtgtggcacagccatactatatgtgggaacagcaattctc 38945696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44100686 - 44100636
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  44100686 gtaacttactcatgtggcacagccataccatatgtgagaacagcaattctc 44100636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 17420547 - 17420502
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17420547 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 17420502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 39793942 - 39793897
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  39793942 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 39793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 39800746 - 39800791
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  39800746 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 39800791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 42505856 - 42505901
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42505856 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 42505901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 43978515 - 43978467
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctccat 54  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  43978515 ttactcgtgtggcacagccatactatatgtgggaacagcaatactccat 43978467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10424824 - 10424774
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  10424824 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 10424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 15831106 - 15831061
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  15831106 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 15831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 30497043 - 30497088
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  30497043 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 30497088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 42499732 - 42499687
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  42499732 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 42499687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 43619236 - 43619281
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  43619236 ttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 43619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22003490 - 22003537
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaatt 48  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||    
T  22003490 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaatt 22003537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 26543282 - 26543235
Alignment:
Q  7 tactcgtgtggcacagccataccatatgtgggaacagcaattctccat 54  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  26543282 tactcgtgtggcacagccaaaccaaatgtgggaacaacaattctccat 26543235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20937882 - 20937832
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  20937882 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 20937832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39951238 - 39951288
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  39951238 gtaatttactcgtgtgacacagccaaaccaaatgtgggaacagcaattctc 39951288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 213542 - 213587
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  213542 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 213587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 3935809 - 3935768
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  3935809 ttactcgtgtggcacagccaaactatatgtgggaacagcaat 3935768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 3940823 - 3940864
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  3940823 ttactcgtgtggcacagccatactatatgtgggaacaacaat 3940864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 5355625 - 5355670
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  5355625 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 5355670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10624555 - 10624600
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  10624555 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 10624600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 17426492 - 17426537
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||    
T  17426492 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 17426537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 30493338 - 30493293
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  30493338 ttactcgtgtggcacagccaaacaagatgtgggaacagcaattctc 30493293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 43536081 - 43536036
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  43536081 ttactcgtgtggcacagccaaacaagatgtgggaacagcaattctc 43536036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 5351943 - 5351895
Alignment:
Q  6 ttactcgtgtggcacagc-cataccatatgtgggaacagcaattctcca 53  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  5351943 ttactcgtgtggcacagcgcatactatatgtgggaacaacaattctcca 5351895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 21998198 - 21998147
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||| |||||||||||||||| ||| || ||||||||||||| |||||||||    
T  21998198 gtaatttactcgtgtggcacaaccaaactatatgtgggaacatcaattctcc 21998147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 30803106 - 30803153
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaatt 48  Q
    |||| |||||||||||||||||||| |||| ||||||||||| |||||    
T  30803106 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaatt 30803153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20951134 - 20951184
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||| ||||||||||||| || || ||||||||||||||||||||    
T  20951134 gtaatttactggtgtggcacagccttatcacatgtgggaacagcaattctc 20951184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29074091 - 29074141
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  29074091 gtaatttactcgtgtggcacaaccaaaccaaatgtgggaacaacaattctc 29074141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39033083 - 39033033
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||| ||||||| |||| ||||||||||| ||||||||    
T  39033083 gtaatttactcgtgtggtacagccaaaccaaatgtgggaacaacaattctc 39033033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 208989 - 208948
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  208989 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 208948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5334560 - 5334515
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||| ||| |||||||||||||||||    
T  5334560 gtaaattactggtgtggcacagccctactatatgtgggaacagcaa 5334515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 5351826 - 5351867
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  5351826 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 5351867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 7267538 - 7267583
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | |||||| |||||||||||||    
T  7267538 ttactcgtgtggcacagccaaacaacatgtggaaacagcaattctc 7267583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 15835305 - 15835350
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  15835305 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 15835350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18003362 - 18003407
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| || |||||||||||||| |||||||||||||||||    
T  18003362 gtaaattactggtttggcacagccatactatatgtgggaacagcaa 18003407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 24749665 - 24749620
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||| || || ||||||||||||||||||||    
T  24749665 ttactagtgtggcacagccttatcacatgtgggaacagcaattctc 24749620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 28468620 - 28468575
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || ||| ||||||||| ||||||||    
T  28468620 ttactcgtgtggcacagccaaactatacgtgggaacaacaattctc 28468575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 43984428 - 43984469
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||| ||||||||||||| || ||||||||||||||||||    
T  43984428 ttactcatgtggcacagccaaactatatgtgggaacagcaat 43984469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 44100892 - 44100937
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  44100892 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 44100937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 45428595 - 45428550
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||| ||||||||||  ||||||||||||| ||||||||    
T  45428595 ttactcgtgtgacacagccatattatatgtgggaacaacaattctc 45428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 7263015 - 7262967
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctccat 54  Q
    ||||| ||||||||||||| || || ||||||||||| |||||||||||    
T  7263015 ttactggtgtggcacagccttatcacatgtgggaacaacaattctccat 7262967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 39947578 - 39947534
Alignment:
Q  7 tactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||| | |||| ||||||||||| ||||||||    
T  39947578 tactcgtgtggcacagcaaaaccaaatgtgggaacaacaattctc 39947534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 41150 - 41195
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  41150 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 41195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 27616694 - 27616649
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  27616694 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 27616649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6760960 - 6761011
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||    
T  6760960 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctcc 6761011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26712032 - 26711983
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  26712032 gtaacttactcgtttggcacagcc-taccatatgtgggaacagcaattctc 26711983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 11694154 - 11694199
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  11694154 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 11694199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13382613 - 13382563
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  13382613 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 13382563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1612837 - 1612882
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  1612837 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 1612882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 11688093 - 11688048
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||    
T  11688093 ttactcgtgtggcacagccatactgtatgtgggaacaacaattctc 11688048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 30826029 - 30825984
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  30826029 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 30825984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 30829745 - 30829786
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  30829745 ttactcgtgtggcacaaccatactatatgtgggaacagcaat 30829786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18347025 - 18346975
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||| ||||||||| |||||| ||||||||||||| ||||||||    
T  18347025 gtaaattactcatgtggcacaaccatactatatgtgggaacaacaattctc 18346975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 18351737 - 18351783
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||||||||||||||||||| || | ||||| |||||||||||||||    
T  18351737 ttactcgtgtggcacagccaaacaacatgtgagaacagcaattctcc 18351783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 6207187 - 6207232
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||| || || ||||||||||| ||||||||||    
T  6207187 ttactcgtgtggcacagtcaaactatatgtgggaaaagcaattctc 6207232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8707966 - 8707917
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattct 50  Q
    |||| ||||||||||||||| |||| |||| ||||||||||| |||||||    
T  8707966 gtaatttactcgtgtggcacggccaaaccaaatgtgggaacaacaattct 8707917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 27641845 - 27641890
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| |||||||||||||| || | ||||||||||||||||||||    
T  27641845 ttactagtgtggcacagccaaacaacatgtgggaacagcaattctc 27641890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 19041211 - 19041256
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  19041211 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 19041256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27659924 - 27659874
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  27659924 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 27659874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 11027074 - 11027029
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  11027074 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 11027029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 11033556 - 11033601
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  11033556 ttactcatgtggcacagccatactatatgtgggaacagcaattctc 11033601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 28241893 - 28241938
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  28241893 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 28241938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 38860262 - 38860307
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  38860262 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 38860307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37820936 - 37820986
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||| |||||| ||||||||||||| ||||||||    
T  37820936 gtaatttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 37820986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14279833 - 14279788
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  14279833 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 14279788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 19035184 - 19035139
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||| || || ||||||||||||||||||||||    
T  19035184 ttactcgtgtggcacagtcaaactatatgtgggaacagcaattctc 19035139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 37814561 - 37814516
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  37814561 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 37814516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 13837702 - 13837658
Alignment:
Q  7 tactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||| | || ||||||||||||||||||||    
T  13837702 tactcgtgtggcacagccaaagcaaatgtgggaacagcaattctc 13837658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 28886487 - 28886523
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaaca 42  Q
    ||||||||||||||||||||||| |||||||||||||    
T  28886487 ttactcgtgtggcacagccatactatatgtgggaaca 28886523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8580568 - 8580618
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||| | || ||||||||||| ||||||||||    
T  8580568 gtaatttactcgtgtggcacagctaaactatatgtgggaatagcaattctc 8580618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 28238118 - 28238073
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||    
T  28238118 ttactcgtgtggcacagccaaacaacatgtgggaagagcaattctc 28238073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 38853458 - 38853413
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| |||| || ||||| ||||||||    
T  38853458 ttactcgtgtggcacagccatactatatatgagaacaacaattctc 38853413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 3732447 - 3732492
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  3732447 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 3732492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 19924734 - 19924689
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  19924734 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 19924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 13629383 - 13629338
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  13629383 ttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 13629338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 30890040 - 30889995
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  30890040 ttactcgtgtggcacagccatactatatgtgggaacaacaattctc 30889995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38633242 - 38633295
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctccat 54  Q
    |||| |||||||||||||||||||| || ||||||||||||| |||||||||||    
T  38633242 gtaatttactcgtgtggcacagccaaactatatgtgggaacaacaattctccat 38633295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 586693 - 586743
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||||||||||||    
T  586693 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacagcaattctc 586743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 3728714 - 3728669
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  3728714 ttactcgtgtggcacagccaaacaagatgtgggaacagcaattctc 3728669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3983070 - 3983025
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  3983070 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 3983025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 8473762 - 8473717
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||    
T  8473762 ttactcgtgtggcacatccatactatatgtgggaacagtaattctc 8473717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 8548763 - 8548808
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  8548763 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 8548808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 19928939 - 19928984
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  19928939 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 19928984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20349441 - 20349396
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  20349441 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 20349396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 26879389 - 26879434
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  26879389 ttactggtgtggcacagccatactatatgtgggaacaacaattctc 26879434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31945951 - 31945996
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  31945951 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 31945996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38776216 - 38776261
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  38776216 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 38776261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 30195472 - 30195523
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||| |||||||||||||| ||||| |||| ||||||||||| |||||||||    
T  30195472 gtaatttactcgtgtggcatagccaaaccaaatgtgggaacaacaattctcc 30195523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43012733 - 43012784
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||| |||||||||||||| ||||| |||| ||||||||| |||||||||||    
T  43012733 gtaatttactcgtgtggcatagccaaaccaaatgtgggaagagcaattctcc 43012784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4883218 - 4883168
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||||||    
T  4883218 gtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 4883168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19914451 - 19914401
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| || | ||||||||||| ||||||||    
T  19914451 gtaatttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 19914401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 26875672 - 26875626
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    ||||| ||||||||||||||||| ||| ||||||| |||||||||||    
T  26875672 ttactggtgtggcacagccatactatacgtgggaatagcaattctcc 26875626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 38771608 - 38771562
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||||||||||||||||||| || | |||||||||||||||| ||||    
T  38771608 ttactcgtgtggcacagccaaacaacatgtgggaacagcaatactcc 38771562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43011812 - 43011762
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  43011812 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 43011762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47652712 - 47652662
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||||||||| |||||||| |||| | ||||||||||||||||||    
T  47652712 gtaatttactcgtgtgacacagccaaaccaaacgtgggaacagcaattctc 47652662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 2365214 - 2365169
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| ||||  |||||||||| ||||||||    
T  2365214 ttactcgtgtggcacagccaaaccaattgtgggaacaacaattctc 2365169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 3993937 - 3993978
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  3993937 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 3993978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 20354029 - 20354070
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  20354029 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 20354070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 20556877 - 20556836
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaat 47  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  20556877 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 20556836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 22397799 - 22397754
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||||||||||||||||| ||| ||| ||||||||| ||||||||    
T  22397799 ttactcgtgtggcacagccttactatacgtgggaacaacaattctc 22397754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 30905750 - 30905705
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||| || || ||||||||||||||||||||    
T  30905750 ttactggtgtggcacagccttatcacatgtgggaacagcaattctc 30905705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 44621211 - 44621256
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||| |||||| ||| ||||||||| ||||||||    
T  44621211 ttactcgtgtggcacaaccatactatacgtgggaacaacaattctc 44621256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22528686 - 22528738
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcca 53  Q
    |||| |||||||||||| |||||||  ||| ||||||||||| ||||||||||    
T  22528686 gtaaattactcgtgtggtacagccaatccaaatgtgggaacatcaattctcca 22528738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 84526 - 84481
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  84526 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 84481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1606 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1606
Description:

Target: scaffold1606; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 55 - 101
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcc 52  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||    
T  55 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctcc 101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11542 - 11592
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  11542 gtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 810 - 765
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||| || || ||||||||||||||||||||    
T  810 ttactggtgtggcacagccttatcacatgtgggaacagcaattctc 765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11764 - 11719
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 46  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  11764 gtaaattactggtgtggcacagccatactatatgtgggaacagcaa 11719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 816 - 858
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaatt 48  Q
    |||||| |||||||||||||||| ||||||||||||| |||||    
T  816 ttactcatgtggcacagccatactatatgtgggaacaacaatt 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 246 - 296
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| ||||| |||||||||||||| |||| ||||||||||| ||||||||    
T  246 gtaatttacttgtgtggcacagccaaaccaaatgtgggaacaacaattctc 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 68399 - 68349
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||| ||||||| ||||| |||| ||||||||||||||||||||    
T  68399 gtaatttactcatgtggcatagccaaaccaaatgtgggaacagcaattctc 68349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 69309 - 69359
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  69309 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctc 69359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 516 - 561
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| |||||||||| |||||| ||||||||||||| ||||||||    
T  516 ttactggtgtggcacaaccatactatatgtgggaacaacaattctc 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 11280 - 11235
Alignment:
Q  6 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    ||||| ||||||||||||| || || ||||||||||||||||||||    
T  11280 ttactagtgtggcacagccttatcaaatgtgggaacagcaattctc 11235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 7396 - 7352
Alignment:
Q  7 tactcgtgtggcacagccataccatatgtgggaacagcaattctc 51  Q
    |||||||||| |||||||| |||| ||||||||||| ||||||||    
T  7396 tactcgtgtgtcacagccaaaccagatgtgggaacaacaattctc 7352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10637 - 10585
Alignment:
Q  1 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcca 53  Q
    |||| ||||||||||| |||| ||| |||| ||||||||||| ||||||||||    
T  10637 gtaatttactcgtgtgacacaaccaaaccaaatgtgggaacaacaattctcca 10585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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