View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3917_low_4 (Length: 571)

Name: NF3917_low_4
Description: NF3917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3917_low_4
NF3917_low_4
[»] chr8 (7 HSPs)
chr8 (87-555)||(14003970-14004438)
chr8 (87-555)||(5766366-5766834)
chr8 (281-382)||(17635611-17635712)
chr8 (87-210)||(34935751-34935874)
chr8 (326-456)||(18314638-18314768)
chr8 (281-382)||(17642890-17642991)
chr8 (416-453)||(17643025-17643062)
[»] chr4 (8 HSPs)
chr4 (95-341)||(1481684-1481924)
chr4 (284-453)||(8186317-8186486)
chr4 (510-555)||(1481587-1481632)
chr4 (293-385)||(661855-661947)
chr4 (515-556)||(21833493-21833534)
chr4 (516-556)||(532652-532692)
chr4 (417-457)||(12124517-12124557)
chr4 (285-385)||(55907634-55907734)
[»] chr6 (5 HSPs)
chr6 (281-364)||(7132323-7132406)
chr6 (281-364)||(7135246-7135329)
chr6 (281-364)||(7138169-7138252)
chr6 (324-432)||(6403528-6403636)
chr6 (281-385)||(8913375-8913479)
[»] chr2 (1 HSPs)
chr2 (285-385)||(1036570-1036670)
[»] chr1 (3 HSPs)
chr1 (300-456)||(7555124-7555280)
chr1 (510-556)||(19467627-19467673)
chr1 (189-222)||(30827961-30827994)
[»] chr5 (1 HSPs)
chr5 (350-453)||(29021726-29021829)


Alignment Details
Target: chr8 (Bit Score: 453; Significance: 0; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 87 - 555
Target Start/End: Complemental strand, 14004438 - 14003970
Alignment:
Q  87 ctctatctgtcgcctcaaaacacttcctctccgtcaccaactgtcacaaattctgtctaactatcttgtatccaaccctacctgtcctccctggcctatt 186  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14004438 ctctatctgtcgcctcaaaacacttcctctccgtcaccaaccgtcacaaattctgtctaactatcttgtatccaaccctacctgtcctccctggcctatt 14004339  T
Q  187 acaaaggttcaccaaactcacctccctcgacctctcgtactattatggtgacctcgatgcacttcttactcaaatctctagcttcccaatgttcaaactc 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14004338 acaaaggttcaccaaactcacctccctcgacctctcgtactattatggtgacctcgatgcacttcttactcaaatctctagcttcccaatgttcaaactc 14004239  T
Q  287 acatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaacc 386  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14004238 acatcgctcaatctttccaaccaacccatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgttccaacc 14004139  T
Q  387 ttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaagaactcgacctcgcttacccctctaaaatcattaatcacac 486  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14004138 ttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaagaactcgacctcgcttacccctctaaaatcattaatcacac 14004039  T
Q  487 acgtgctaccttctccactggactagaggctctttcattagcactcatcaaactccgcaaggttaatct 555  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14004038 acatgctaccttctccactggactagaggctctttcattagcactcatcaaactccgcaaggttaatct 14003970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 87 - 555
Target Start/End: Original strand, 5766366 - 5766834
Alignment:
Q  87 ctctatctgtcgcctcaaaacacttcctctccgtcaccaactgtcacaaattctgtctaactatcttgtatccaaccctacctgtcctccctggcctatt 186  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5766366 ctctatctgtcgcctcaaaacacttcctctccgtcaccaaccgtcacaaattctgtctaactatcttgtatccagccctacctgtcctccctggcctatt 5766465  T
Q  187 acaaaggttcaccaaactcacctccctcgacctctcgtactattatggtgacctcgatgcacttcttactcaaatctctagcttcccaatgttcaaactc 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  5766466 acaaaggttcaccaaactcacctccctcgacctctcgtactattacggtgacctagatgcacttcttactcaaatctctagcttcccaatgttgaaactc 5766565  T
Q  287 acatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaacc 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5766566 acatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgttccaacc 5766665  T
Q  387 ttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaagaactcgacctcgcttacccctctaaaatcattaatcacac 486  Q
    ||| ||||||||||||||||||| |||| ||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5766666 ttatttctcttaatagcactgatatccacctcattgctgatacttttcctttgctagaagaacttgacctcgcttacccctctaaaatcattaatcacac 5766765  T
Q  487 acgtgctaccttctccactggactagaggctctttcattagcactcatcaaactccgcaaggttaatct 555  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5766766 acatgctaccttctccactggactagaggctctttcattagcactcatcaaactccgcaaggttaatct 5766834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 281 - 382
Target Start/End: Original strand, 17635611 - 17635712
Alignment:
Q  281 aaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgtt 380  Q
    ||||||| ||| |||||||| ||||||||||||| | ||||  ||||||| || ||||||||||| ||||| ||||||||||||||||| || | |||||    
T  17635611 aaactcatatcactcaatctgtccaaccaactcaccattccaactaatgggttacgagctttctcccggaatattacaactttgacctctctcacttgtt 17635710  T
Q  381 cc 382  Q
    ||    
T  17635711 cc 17635712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 34935751 - 34935874
Alignment:
Q  87 ctctatctgtcgcctcaaaacacttcctctccgtcaccaactgtcacaaattctgtctaactatcttgtatccaaccctacctgtcctccctggcctatt 186  Q
    |||| |||||| |||| |||||||||||||||||||||||| |||||||||||| ||| ||||| |   ||| |||||| |||  ||| ||| |||| ||    
T  34935751 ctctctctgtctcctccaaacacttcctctccgtcaccaaccgtcacaaattctctctcactatttctgatcaaaccctcccttcccttcctcgcctctt 34935850  T
Q  187 acaaaggttcaccaaactcacctc 210  Q
     |||||||| ||||| ||||||||    
T  34935851 ccaaaggtttaccaacctcacctc 34935874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 326 - 456
Target Start/End: Original strand, 18314638 - 18314768
Alignment:
Q  326 aatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgctg 425  Q
    ||||| || |||| ||||||||  || ||||||||||||||||||||    |||||  || || | |||||  || |||||||||||   ||||||||||    
T  18314638 aatggcttacgagttttctctcaaaatattacaactttgacctcactctcatgttcttacattcaatctctccatggcactgatctcttcctcattgctg 18314737  T
Q  426 attgttttcctttgctagaagaactcgacct 456  Q
    ||||||| |||||||| ||||||||||||||    
T  18314738 attgtttccctttgctcgaagaactcgacct 18314768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 281 - 382
Target Start/End: Original strand, 17642890 - 17642991
Alignment:
Q  281 aaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgtt 380  Q
    ||||||||||| |||||||| |||||||| |||| | ||||  | ||||| || | ||||||||| | ||| ||||||||||||||||| || | |||||    
T  17642890 aaactcacatcactcaatctctccaaccatctcaccattcccaccaatgggttacaagctttctcccagaatattacaactttgacctctctcacttgtt 17642989  T
Q  381 cc 382  Q
    ||    
T  17642990 cc 17642991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 17643025 - 17643062
Alignment:
Q  416 ctcattgctgattgttttcctttgctagaagaactcga 453  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  17643025 ctcatcgctgattgtttccctttgctagaagaactcga 17643062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 341
Target Start/End: Complemental strand, 1481924 - 1481684
Alignment:
Q  95 gtcgcctcaaaacacttcctctccgtcaccaactgtcacaaattctgtctaactatcttgtatccaaccctacctgtcctccctggcctattacaaaggt 194  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||| ||| ||||||| | || ||||||    |  ||| ||  ||||  |||||||||    
T  1481924 gtcgcttcaaaacacttcctctccgtcaccaacagttacaaattctctctcactatctggcattcaacccg---ttaccttccacgcctcctacaaaggt 1481828  T
Q  195 tcaccaaactcacctccctcgacctctcgtactattatggtgacctcgatgcacttcttactcaaatctctagcttcccaatgttcaaactcacatcgct 294  Q
    ||||||| ||||||||  | ||||| || | ||| ||   | |||||||||| ||||| || ||||||||  | |||||| ||   ||||||||||||||    
T  1481827 tcaccaatctcacctcttttgacctttccttctactactttaacctcgatgcgcttctcacccaaatctcctgtttcccattg---aaactcacatcgct 1481731  T
Q  295 caatctttccaaccaactcatccttcctgctaatggtttgcgagctt 341  Q
    |||| | || |||||||||| |||||| |||||||| ||||||||||    
T  1481730 caatatctcaaaccaactcaaccttcccgctaatggcttgcgagctt 1481684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 453
Target Start/End: Original strand, 8186317 - 8186486
Alignment:
Q  284 ctcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttcca 383  Q
    |||||||| |||||||| || ||| ||| || | ||||||| ||||| ||||||| | |||| || || |||||||||||||||||||| |  |||||||    
T  8186317 ctcacatcactcaatctctctaacaaacccaccattcctgcaaatggattgcgagttctctcccgaaatattacaactttgacctcactcacatgttcca 8186416  T
Q  384 accttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaagaactcga 453  Q
    || || | ||| | |||||||||||  ||   ||||| || |||||||||||||| ||||||||||||||    
T  8186417 acattgaatctatcaatagcactgacatcttcctcatcgccgattgttttcctttcctagaagaactcga 8186486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 510 - 555
Target Start/End: Complemental strand, 1481632 - 1481587
Alignment:
Q  510 tagaggctctttcattagcactcatcaaactccgcaaggttaatct 555  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||    
T  1481632 tagaggctctttcattggcactcttcaaactccgcaagcttaatct 1481587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 385
Target Start/End: Complemental strand, 661947 - 661855
Alignment:
Q  293 ctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaac 385  Q
    |||||||| |||||||||  || | |||| ||||||||||||||||||||||| |   | ||||||||||| ||||| || ||||||| ||||    
T  661947 ctcaatctctccaaccaaaccaccattcccgctaatggtttgcgagctttctcccaatatattacaactttaacctctctcatttgttacaac 661855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 515 - 556
Target Start/End: Original strand, 21833493 - 21833534
Alignment:
Q  515 gctctttcattagcactcatcaaactccgcaaggttaatctt 556  Q
    ||||||||| | ||||| ||||||||||||||||||||||||    
T  21833493 gctctttcacttgcacttatcaaactccgcaaggttaatctt 21833534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 532692 - 532652
Alignment:
Q  516 ctctttcattagcactcatcaaactccgcaaggttaatctt 556  Q
    ||||||||||| ||||  |||||||||||||||||||||||    
T  532692 ctctttcattatcacttttcaaactccgcaaggttaatctt 532652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 457
Target Start/End: Complemental strand, 12124557 - 12124517
Alignment:
Q  417 tcattgctgattgttttcctttgctagaagaactcgacctc 457  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  12124557 tcattgctgattgtttccctttactagaagaacttgacctc 12124517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 55907634 - 55907734
Alignment:
Q  285 tcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaa 384  Q
    |||| ||||||||||| ||||||||||  ||| | || |||| ||| || ||||||||||| |  || |||||||||||||  || || |||||||||||    
T  55907634 tcacttcgctcaatctctccaaccaacctatcatccccgctactggcttacgagctttctcccaaaatattacaactttgaattctctcatttgttccaa 55907733  T
Q  385 c 385  Q
    |    
T  55907734 c 55907734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 364
Target Start/End: Complemental strand, 7132406 - 7132323
Alignment:
Q  281 aaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttg 364  Q
    |||||||||||||| | | | |||||||||| || | ||||||| ||||| |||||||||||||| |  |||||||||||||||    
T  7132406 aaactcacatcgcttagtatctccaaccaacacacctttcctgcaaatgggttgcgagctttctcccaaaacattacaactttg 7132323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 364
Target Start/End: Complemental strand, 7135329 - 7135246
Alignment:
Q  281 aaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttg 364  Q
    |||||||||||||| | | | |||||||||| || | ||||||| ||||| |||||||||||||| |  |||||||||||||||    
T  7135329 aaactcacatcgcttagtatctccaaccaacacacctttcctgcaaatgggttgcgagctttctcccaaaacattacaactttg 7135246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 364
Target Start/End: Complemental strand, 7138252 - 7138169
Alignment:
Q  281 aaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttg 364  Q
    |||||||||||||| | | | |||||||||| || | ||||||| ||||| |||||||||||||| |  |||||||||||||||    
T  7138252 aaactcacatcgcttagtatctccaaccaacacacctttcctgcaaatgggttgcgagctttctcccaaaacattacaactttg 7138169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 432
Target Start/End: Complemental strand, 6403636 - 6403528
Alignment:
Q  324 ctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgc 423  Q
    ||||||| |||||||||||||| || ||  | || ||||||||||| |||  ||||||| || || |||||||||||||| || |||||   ||||||||    
T  6403636 ctaatgggttgcgagctttctcccgaaaggtcactactttgacctctcttgattgttccgacattgattctcttaatagctctcatctcttactcattgc 6403537  T
Q  424 tgattgttt 432  Q
     ||||||||    
T  6403536 cgattgttt 6403528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 8913375 - 8913479
Alignment:
Q  281 aaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgtt 380  Q
    |||||||||||||||||| | |||||||||   | | ||||||||||||| |||| || ||| |||   || ||||||||||||||||| || | |||||    
T  8913375 aaactcacatcgctcaatatctccaaccaatggacctttcctgctaatgggttgctagttttatctaaaaagattacaactttgacctctctcaattgtt 8913474  T
Q  381 ccaac 385  Q
    |||||    
T  8913475 ccaac 8913479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 1036570 - 1036670
Alignment:
Q  285 tcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaa 384  Q
    |||| ||||||||||| ||||||||||  ||| | || |||| ||| || ||||||||||| |  || |||||||||||||| || || |||||||||||    
T  1036570 tcacttcgctcaatctctccaaccaacctatcatccccgctactggcttacgagctttctcccaaaatattacaactttgacttctctcatttgttccaa 1036669  T
Q  385 c 385  Q
    |    
T  1036670 c 1036670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 456
Target Start/End: Complemental strand, 7555280 - 7555124
Alignment:
Q  300 tttccaaccaactcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaaccttaattctcttaa 399  Q
    |||||||||||| || | | ||||| | ||| |||||||||||||| |  || ||||||||||| |||||||| | |||||||||  |  ||||| | ||    
T  7555280 tttccaaccaacccaccatccctgcaattggattgcgagctttctcccaaaatattacaactttaacctcactcacttgttccaaaatggattctatcaa 7555181  T
Q  400 tagcactgatctccatctcattgctgattgttttcctttgctagaagaactcgacct 456  Q
    ||||| |||  |    ||||||||||| ||||| |||||||| ||||||||| ||||    
T  7555180 tagcaatgacttgttactcattgctgaatgtttccctttgctcgaagaactcaacct 7555124  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 556
Target Start/End: Original strand, 19467627 - 19467673
Alignment:
Q  510 tagaggctctttcattagcactcatcaaactccgcaaggttaatctt 556  Q
    |||||||||||||| | |||||  |||||||||||||||||||||||    
T  19467627 tagaggctctttcacttgcacttctcaaactccgcaaggttaatctt 19467673  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 30827994 - 30827961
Alignment:
Q  189 aaaggttcaccaaactcacctccctcgacctctc 222  Q
    ||||||||||||| ||||||||||||||||||||    
T  30827994 aaaggttcaccaatctcacctccctcgacctctc 30827961  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 453
Target Start/End: Complemental strand, 29021829 - 29021726
Alignment:
Q  350 aacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaagaac 449  Q
    |||||||| ||||||||||| || | ||||| | ||||| |  | || ||||||||| |||||  ||| ||||||||||| || |||||||| |||||||    
T  29021829 aacattactactttgacctctctcacttgttaccaccttgaaaccctcaatagcactcatctctttcttattgctgattgcttccctttgctcgaagaac 29021730  T
Q  450 tcga 453  Q
    ||||    
T  29021729 tcga 29021726  T

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