View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3918_high_170 (Length: 249)
Name: NF3918_high_170
Description: NF3918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3918_high_170 |
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Alignment Details
Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 4308983 - 4308860
Alignment:
| Q |
95 |
tttgtaggggccataatcatatttaacattttttatttaaaaaataagaatgtaagt---aacatttgtatgctttcttttcattccaaacaacagaaag |
191 |
Q |
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| T |
4308983 |
tttgtaggggccataatcatatttaacattttttatttaaaaaataagaatgtaagtaacaacatttgtatgctttcttttcattccaaacaacagaaag |
4308884 |
T |
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| Q |
192 |
ttagtgctatcccttctattctcc |
215 |
Q |
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||||||||||||||||| |||||| |
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| T |
4308883 |
ttagtgctatcccttctcttctcc |
4308860 |
T |
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