View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3918_high_209 (Length: 232)

Name: NF3918_high_209
Description: NF3918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3918_high_209
NF3918_high_209
[»] chr2 (35 HSPs)
chr2 (19-219)||(4882676-4882878)
chr2 (38-123)||(20539673-20539758)
chr2 (44-125)||(12940940-12941021)
chr2 (30-118)||(12668414-12668502)
chr2 (40-117)||(14996224-14996302)
chr2 (39-125)||(30335390-30335476)
chr2 (21-126)||(34784964-34785069)
chr2 (45-117)||(30404856-30404928)
chr2 (21-117)||(30717512-30717608)
chr2 (46-117)||(21374706-21374777)
chr2 (46-117)||(39323245-39323316)
chr2 (39-129)||(15972842-15972932)
chr2 (39-117)||(37558958-37559036)
chr2 (45-117)||(6940236-6940308)
chr2 (40-123)||(18841014-18841097)
chr2 (39-129)||(19536397-19536488)
chr2 (54-125)||(36409642-36409713)
chr2 (38-109)||(36756343-36756414)
chr2 (23-117)||(16069238-16069332)
chr2 (39-109)||(20473311-20473381)
chr2 (20-114)||(37419727-37419821)
chr2 (39-98)||(2438719-2438778)
chr2 (46-144)||(21091676-21091775)
chr2 (54-109)||(21782833-21782888)
chr2 (54-129)||(28412319-28412394)
chr2 (40-98)||(11223864-11223922)
chr2 (38-128)||(15657834-15657924)
chr2 (39-117)||(18421944-18422022)
chr2 (54-123)||(29663984-29664054)
chr2 (47-109)||(38117167-38117229)
chr2 (21-106)||(26769503-26769588)
chr2 (56-109)||(37986768-37986821)
chr2 (76-117)||(41047855-41047896)
chr2 (39-122)||(21624242-21624326)
chr2 (45-97)||(30527601-30527653)
[»] scaffold0053 (1 HSPs)
scaffold0053 (39-129)||(8767-8857)
[»] chr8 (36 HSPs)
chr8 (21-123)||(2572038-2572140)
chr8 (21-129)||(22651945-22652053)
chr8 (39-123)||(20873044-20873128)
chr8 (21-129)||(29510286-29510394)
chr8 (21-115)||(15816111-15816205)
chr8 (21-123)||(28745473-28745575)
chr8 (40-123)||(4298887-4298970)
chr8 (37-92)||(8342978-8343033)
chr8 (38-98)||(25566841-25566901)
chr8 (39-115)||(34897068-34897144)
chr8 (45-129)||(44067485-44067569)
chr8 (37-92)||(8343322-8343377)
chr8 (46-129)||(22197749-22197832)
chr8 (49-123)||(4673435-4673509)
chr8 (47-109)||(22595983-22596045)
chr8 (48-114)||(30271300-30271366)
chr8 (47-117)||(36450762-36450832)
chr8 (32-109)||(13436957-13437034)
chr8 (20-129)||(36934639-36934748)
chr8 (47-124)||(41838131-41838208)
chr8 (39-91)||(4948659-4948711)
chr8 (39-115)||(5813575-5813651)
chr8 (60-131)||(949285-949356)
chr8 (23-106)||(12570493-12570575)
chr8 (63-118)||(12936515-12936570)
chr8 (39-106)||(13844596-13844663)
chr8 (39-109)||(24613510-24613579)
chr8 (45-123)||(27213522-27213600)
chr8 (21-98)||(21465412-21465489)
chr8 (21-106)||(29447092-29447177)
chr8 (45-98)||(40332191-40332244)
chr8 (54-98)||(14731712-14731756)
chr8 (39-71)||(15023257-15023289)
chr8 (39-123)||(24669408-24669492)
chr8 (45-113)||(31236583-31236651)
chr8 (54-106)||(39954294-39954346)
[»] chr6 (56 HSPs)
chr6 (21-144)||(8365501-8365626)
chr6 (23-129)||(16766666-16766772)
chr6 (40-129)||(7938085-7938174)
chr6 (39-123)||(7977830-7977914)
chr6 (23-129)||(9107354-9107460)
chr6 (33-123)||(12696299-12696389)
chr6 (39-117)||(17841589-17841667)
chr6 (39-129)||(853859-853949)
chr6 (39-129)||(34595103-34595193)
chr6 (39-123)||(426514-426598)
chr6 (39-90)||(6327518-6327569)
chr6 (54-129)||(8805587-8805662)
chr6 (40-123)||(15489733-15489816)
chr6 (39-98)||(28715295-28715354)
chr6 (45-127)||(7086766-7086848)
chr6 (21-115)||(9195736-9195830)
chr6 (40-122)||(13851712-13851794)
chr6 (33-118)||(2224206-2224291)
chr6 (21-106)||(5970090-5970175)
chr6 (56-129)||(6389712-6389785)
chr6 (38-144)||(7930257-7930365)
chr6 (38-123)||(10770673-10770758)
chr6 (47-123)||(8776981-8777057)
chr6 (45-117)||(25038077-25038149)
chr6 (39-123)||(33001289-33001373)
chr6 (38-116)||(10760841-10760918)
chr6 (45-123)||(16833283-16833361)
chr6 (47-117)||(17435180-17435250)
chr6 (32-106)||(26562681-26562755)
chr6 (39-117)||(28152080-28152157)
chr6 (54-123)||(7625097-7625166)
chr6 (56-109)||(17168480-17168533)
chr6 (39-106)||(3209373-3209441)
chr6 (39-122)||(4877918-4878002)
chr6 (38-106)||(21395307-21395374)
chr6 (45-109)||(31959148-31959212)
chr6 (39-90)||(403864-403915)
chr6 (54-109)||(7996393-7996448)
chr6 (54-109)||(8022353-8022408)
chr6 (41-99)||(1191702-1191760)
chr6 (39-109)||(6898281-6898351)
chr6 (39-105)||(7801156-7801222)
chr6 (21-106)||(8713971-8714057)
chr6 (56-106)||(10842524-10842574)
chr6 (55-129)||(34447374-34447448)
chr6 (44-105)||(1681751-1681812)
chr6 (32-109)||(7723243-7723320)
chr6 (45-90)||(18252757-18252802)
chr6 (54-111)||(19040339-19040396)
chr6 (55-104)||(24614404-24614453)
chr6 (46-91)||(31384927-31384972)
chr6 (39-111)||(32978899-32978972)
chr6 (72-129)||(33303628-33303685)
chr6 (39-123)||(5732510-5732594)
chr6 (38-98)||(9025493-9025553)
chr6 (58-98)||(24138426-24138466)
[»] chr1 (49 HSPs)
chr1 (39-117)||(46348383-46348461)
chr1 (46-129)||(5927347-5927430)
chr1 (45-123)||(48450593-48450671)
chr1 (33-117)||(1486703-1486787)
chr1 (18-129)||(6612150-6612261)
chr1 (39-109)||(22881616-22881686)
chr1 (39-109)||(38078661-38078731)
chr1 (32-129)||(40917720-40917815)
chr1 (39-116)||(22515887-22515964)
chr1 (39-127)||(41877470-41877558)
chr1 (54-129)||(398780-398855)
chr1 (39-122)||(42359449-42359532)
chr1 (38-108)||(113289-113359)
chr1 (21-91)||(28273070-28273140)
chr1 (21-127)||(47989469-47989574)
chr1 (49-117)||(18556466-18556534)
chr1 (40-115)||(1815240-1815315)
chr1 (40-91)||(18190109-18190160)
chr1 (22-92)||(8010270-8010340)
chr1 (58-123)||(2896140-2896205)
chr1 (46-123)||(14359529-14359605)
chr1 (22-79)||(15449215-15449272)
chr1 (38-91)||(24577185-24577238)
chr1 (45-109)||(3490396-3490460)
chr1 (51-115)||(16297295-16297359)
chr1 (54-122)||(16927200-16927268)
chr1 (39-107)||(19058856-19058924)
chr1 (49-109)||(37055866-37055926)
chr1 (39-144)||(39130767-39130874)
chr1 (39-114)||(9103624-9103698)
chr1 (46-129)||(15323132-15323215)
chr1 (54-129)||(34298405-34298480)
chr1 (39-85)||(18337342-18337388)
chr1 (45-99)||(21378577-21378631)
chr1 (39-109)||(31672895-31672965)
chr1 (40-90)||(40258934-40258984)
chr1 (38-91)||(1704991-1705044)
chr1 (94-144)||(9630635-9630687)
chr1 (56-109)||(9656781-9656834)
chr1 (23-109)||(31694694-31694782)
chr1 (54-115)||(34257925-34257986)
chr1 (45-129)||(48040467-48040552)
chr1 (38-70)||(2218267-2218299)
chr1 (38-123)||(5944256-5944343)
chr1 (47-122)||(13011223-13011299)
chr1 (45-109)||(22794084-22794148)
chr1 (54-90)||(26837757-26837793)
chr1 (45-97)||(31015044-31015096)
chr1 (47-91)||(32461471-32461515)
[»] chr7 (39 HSPs)
chr7 (18-90)||(9408313-9408385)
chr7 (21-129)||(24339611-24339719)
chr7 (38-144)||(27944993-27945101)
chr7 (33-123)||(13770666-13770756)
chr7 (39-129)||(26733273-26733363)
chr7 (40-117)||(11061077-11061154)
chr7 (21-106)||(11831424-11831509)
chr7 (47-123)||(25481877-25481953)
chr7 (39-144)||(21864758-21864867)
chr7 (45-123)||(24105653-24105731)
chr7 (54-123)||(5235961-5236030)
chr7 (19-80)||(21560521-21560582)
chr7 (21-106)||(25822647-25822732)
chr7 (38-123)||(43027468-43027553)
chr7 (24-92)||(26033446-26033514)
chr7 (38-105)||(7328690-7328757)
chr7 (45-123)||(4017800-4017878)
chr7 (58-123)||(2034416-2034481)
chr7 (45-122)||(14077440-14077517)
chr7 (45-122)||(14387468-14387545)
chr7 (33-109)||(5409830-5409906)
chr7 (39-107)||(7197297-7197365)
chr7 (21-109)||(7438695-7438783)
chr7 (38-129)||(1885542-1885633)
chr7 (54-125)||(5956246-5956317)
chr7 (38-117)||(18215185-18215264)
chr7 (38-80)||(2334268-2334310)
chr7 (22-72)||(11272569-11272619)
chr7 (39-109)||(15680798-15680868)
chr7 (21-123)||(15902797-15902899)
chr7 (39-105)||(28155563-28155629)
chr7 (38-91)||(3991331-3991384)
chr7 (38-91)||(7058433-7058486)
chr7 (33-98)||(9778500-9778565)
chr7 (40-113)||(11665441-11665514)
chr7 (39-92)||(21880158-21880211)
chr7 (32-80)||(18039017-18039065)
chr7 (38-122)||(21930605-21930688)
chr7 (38-70)||(43243105-43243137)
[»] chr5 (41 HSPs)
chr5 (45-117)||(14674250-14674322)
chr5 (21-128)||(21522720-21522827)
chr5 (21-128)||(21533286-21533393)
chr5 (39-129)||(21191056-21191146)
chr5 (47-117)||(43001781-43001851)
chr5 (21-129)||(19579670-19579778)
chr5 (33-109)||(31084312-31084388)
chr5 (38-129)||(13287398-13287489)
chr5 (32-123)||(41633710-41633801)
chr5 (21-115)||(39698524-39698618)
chr5 (54-144)||(22013366-22013458)
chr5 (24-122)||(19552530-19552626)
chr5 (45-128)||(24906307-24906390)
chr5 (39-109)||(6247611-6247681)
chr5 (55-129)||(16304440-16304514)
chr5 (39-97)||(21576745-21576803)
chr5 (39-109)||(33178014-33178084)
chr5 (39-129)||(15382446-15382538)
chr5 (20-84)||(21319926-21319990)
chr5 (21-129)||(21541999-21542107)
chr5 (46-123)||(6326304-6326381)
chr5 (22-99)||(7677704-7677781)
chr5 (45-113)||(7218273-7218341)
chr5 (39-107)||(8420018-8420086)
chr5 (54-106)||(39205872-39205924)
chr5 (38-98)||(41091256-41091316)
chr5 (40-99)||(42893359-42893418)
chr5 (33-91)||(5894827-5894885)
chr5 (39-117)||(16203795-16203873)
chr5 (39-117)||(34879331-34879409)
chr5 (20-122)||(37328825-37328927)
chr5 (56-122)||(42469197-42469263)
chr5 (47-117)||(4105238-4105310)
chr5 (19-76)||(8044260-8044317)
chr5 (33-114)||(10298553-10298634)
chr5 (46-91)||(15405062-15405107)
chr5 (45-90)||(25863212-25863257)
chr5 (45-109)||(7997172-7997236)
chr5 (21-97)||(12264811-12264887)
chr5 (45-129)||(17177029-17177113)
chr5 (21-129)||(30183518-30183626)
[»] chr3 (48 HSPs)
chr3 (38-129)||(28917970-28918061)
chr3 (23-98)||(1509539-1509614)
chr3 (46-125)||(14216865-14216944)
chr3 (46-125)||(14222994-14223073)
chr3 (38-129)||(15796293-15796384)
chr3 (39-117)||(55401056-55401134)
chr3 (22-122)||(4990950-4991050)
chr3 (39-123)||(26492205-26492289)
chr3 (38-129)||(3164024-3164115)
chr3 (46-109)||(10268493-10268556)
chr3 (46-125)||(11610494-11610573)
chr3 (21-116)||(14832081-14832176)
chr3 (45-112)||(26508096-26508163)
chr3 (47-109)||(4987299-4987361)
chr3 (39-117)||(8587021-8587099)
chr3 (39-129)||(10335286-10335376)
chr3 (32-106)||(34910309-34910383)
chr3 (45-109)||(20503454-20503518)
chr3 (21-129)||(41961632-41961740)
chr3 (23-109)||(14747550-14747637)
chr3 (54-129)||(25064878-25064953)
chr3 (19-106)||(28812507-28812594)
chr3 (39-109)||(10954941-10955011)
chr3 (56-106)||(15864825-15864875)
chr3 (39-109)||(21479107-21479177)
chr3 (33-99)||(49651780-49651846)
chr3 (21-129)||(750600-750709)
chr3 (26-123)||(9800015-9800112)
chr3 (21-106)||(14209105-14209190)
chr3 (54-115)||(23870574-23870635)
chr3 (38-115)||(27505229-27505306)
chr3 (54-115)||(29112295-29112356)
chr3 (38-107)||(34185122-34185191)
chr3 (33-117)||(25948881-25948965)
chr3 (39-122)||(16000016-16000099)
chr3 (58-129)||(25652050-25652121)
chr3 (39-98)||(51206353-51206412)
chr3 (47-129)||(7171471-7171552)
chr3 (41-91)||(29508451-29508501)
chr3 (54-99)||(11313815-11313860)
chr3 (32-109)||(14829679-14829755)
chr3 (45-98)||(21256992-21257045)
chr3 (47-112)||(47775711-47775776)
chr3 (34-90)||(1583244-1583300)
chr3 (22-129)||(3610602-3610710)
chr3 (39-99)||(7928449-7928509)
chr3 (54-98)||(27277853-27277897)
chr3 (45-129)||(35994744-35994827)
[»] scaffold0223 (1 HSPs)
scaffold0223 (32-129)||(20141-20238)
[»] chr4 (35 HSPs)
chr4 (38-115)||(16303265-16303342)
chr4 (38-117)||(30298927-30299007)
chr4 (38-117)||(30327795-30327875)
chr4 (38-125)||(30838183-30838270)
chr4 (39-109)||(21945492-21945562)
chr4 (39-129)||(23292986-23293076)
chr4 (47-129)||(27706185-27706267)
chr4 (40-129)||(35157986-35158075)
chr4 (21-129)||(19482637-19482745)
chr4 (47-98)||(37203264-37203315)
chr4 (45-129)||(20633454-20633535)
chr4 (39-99)||(2361975-2362035)
chr4 (22-90)||(40742599-40742667)
chr4 (38-80)||(12708165-12708207)
chr4 (45-90)||(6485617-6485662)
chr4 (47-124)||(11651142-11651219)
chr4 (21-106)||(24613683-24613768)
chr4 (46-99)||(38847019-38847072)
chr4 (45-97)||(29205445-29205497)
chr4 (47-118)||(51701241-51701309)
chr4 (40-107)||(47263977-47264044)
chr4 (33-99)||(3947760-3947826)
chr4 (21-115)||(4383351-4383444)
chr4 (38-92)||(11596351-11596405)
chr4 (38-104)||(13134444-13134510)
chr4 (46-92)||(28964255-28964301)
chr4 (45-99)||(31800484-31800538)
chr4 (33-106)||(12895110-12895183)
chr4 (39-107)||(49431016-49431085)
chr4 (61-105)||(5832716-5832760)
chr4 (39-107)||(12895274-12895342)
chr4 (39-123)||(34306804-34306887)
chr4 (57-125)||(34515892-34515960)
chr4 (39-91)||(54580023-54580075)
chr4 (54-98)||(56257933-56257977)
[»] scaffold0003 (1 HSPs)
scaffold0003 (21-129)||(241563-241671)
[»] scaffold0103 (1 HSPs)
scaffold0103 (47-117)||(51792-51862)
[»] scaffold0652 (1 HSPs)
scaffold0652 (39-116)||(462-539)
[»] scaffold0722 (1 HSPs)
scaffold0722 (47-115)||(7040-7108)
[»] scaffold0018 (2 HSPs)
scaffold0018 (46-129)||(178825-178909)
scaffold0018 (46-125)||(192256-192335)
[»] scaffold0008 (1 HSPs)
scaffold0008 (21-117)||(263354-263450)
[»] scaffold0004 (2 HSPs)
scaffold0004 (46-115)||(92790-92859)
scaffold0004 (22-85)||(83173-83236)
[»] scaffold0027 (1 HSPs)
scaffold0027 (39-123)||(46657-46741)
[»] scaffold0086 (1 HSPs)
scaffold0086 (21-80)||(2946-3005)
[»] scaffold0011 (1 HSPs)
scaffold0011 (40-91)||(17750-17801)
[»] scaffold0021 (1 HSPs)
scaffold0021 (45-129)||(130451-130535)
[»] scaffold0066 (1 HSPs)
scaffold0066 (51-106)||(33375-33430)
[»] scaffold0050 (1 HSPs)
scaffold0050 (39-106)||(70270-70337)
[»] scaffold0361 (1 HSPs)
scaffold0361 (48-106)||(14522-14580)
[»] scaffold0475 (1 HSPs)
scaffold0475 (88-129)||(3285-3326)
[»] scaffold0122 (1 HSPs)
scaffold0122 (39-112)||(7996-8068)
[»] scaffold0049 (1 HSPs)
scaffold0049 (32-129)||(56891-56988)
[»] scaffold0024 (1 HSPs)
scaffold0024 (32-129)||(68235-68332)


Alignment Details
Target: chr2 (Bit Score: 148; Significance: 3e-78; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 4882676 - 4882878
Alignment:
Q  19 tatcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgtt 118  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||| |||||    
T  4882676 tatcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgtcagtatctgtgtt 4882775  T
Q  119 gtgtctggtgt--gtatccatgcttcatgatatatacgtttggatcacatgaaatcagaatcaaaacaagaactataagcttccctcaaggctcaatctc 216  Q
    ||| | | ||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4882776 gtgcccgatgaccgtatgcatgcttcatgatatatacgtttggatcacatgaaatcagaatcaaaacaagaactataagcttccctcaaggctcaatctc 4882875  T
Q  217 tgc 219  Q
    |||    
T  4882876 tgc 4882878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 20539673 - 20539758
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||||||| |||||    
T  20539673 acgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtc 20539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 12940940 - 12941021
Alignment:
Q  44 tcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg 125  Q
    |||||| ||||||||||||| |||||||| |||||||||||| |||||  ||||| |||||||||| ||||||| |||||||    
T  12940940 tcgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtctg 12941021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 12668414 - 12668502
Alignment:
Q  30 ataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgtt 118  Q
    ||||||| |||||| |||||||| |||||||||| |||||| |||||||||||||| |||||   ||||| |||||||||||| |||||    
T  12668414 ataccgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagtatctgtgtt 12668502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 14996224 - 14996302
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatca-ttttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||| |||||| |||||| | ||||||| |||||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgt 14996302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 30335476 - 30335390
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg 125  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||| |||||  |||||| ||||  ||| ||||||| |||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtctg 30335390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 34784964 - 34785069
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| |||||||| |||||| |||||| | ||||||||||||||||| | ||||| | ||| ||||||  ||||||  |||||||| ||||||| ||    
T  34784964 tcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgt 34785063  T
Q  121 gtctgg 126  Q
    ||||||    
T  34785064 gtctgg 34785069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 30404856 - 30404928
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||||||||||||||||| |||||| | |||||||||||| |||| | |||||| ||||||||| |||||||    
T  30404856 cgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgt 30404928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 30717512 - 30717608
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||||| || | ||| |||||||||||||||||||||||||| |||||| | |||||||||||| ||||||  |||||   ||||||| |||||||    
T  30717512 tcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgt 30717608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 21374706 - 21374777
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||||||||||||||||| |||||| | |||||||||||| |||||| |||||| ||||| ||| |||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgt 21374777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 39323316 - 39323245
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||||||||||||||||| |||||| | ||||| |||||| |||||| |||||||||| ||||| |||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgt 39323245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 15972932 - 15972842
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| ||||||||||||||||||| |||| | | |||||||||||| ||||   |||||| ||||||||| ||||||| || ||||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatctggtgt 15972842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 37559036 - 37558958
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||| ||||||||||||||||| | |||||| | |||||| ||||| |||||| |||||| ||||||||| |||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgt 37558958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 6940308 - 6940236
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||||||||||||||||| |||||| | | ||||| |||| |||||| |||||| ||||||||| |||||||    
T  6940308 cgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgt 6940236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 18841014 - 18841097
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||| ||||||||||||||||||| |||||| | |||||||||||| |||||  |||||  ||||||||| ||| ||| |||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtc 18841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 19536397 - 19536488
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatca-ttttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| ||||||||||||||||||| |||||| | | ||||||||||| |||||  |||||| ||||||| | ||||||| ||||| |||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgt 19536488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 36409642 - 36409713
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg 125  Q
    ||||||||||||||||| | |||||||||||| || ||| |||||| | ||| ||||||||||| |||||||    
T  36409642 taattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtctg 36409713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 109
Target Start/End: Original strand, 36756343 - 36756414
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||| |||||||| |||||||||| |||||| | |||| ||||||| |||||  ||||||||||||||||    
T  36756343 acgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagt 36756414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 16069238 - 16069332
Alignment:
Q  23 gtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||| ||| ||||||||||||| | |||   |||||||||| |||||||| ||||||| |||| |||| | |||||| ||||||||| |||||||    
T  16069238 gtgtttgacaccgatacgacattgtcacaaataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgt 16069332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 20473381 - 20473311
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||||||||||||||||||||||| |||||||| | ||||| |||| |||||  |||||| | |||||||    
T  20473381 cgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagt 20473311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 37419821 - 37419727
Alignment:
Q  20 atcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccg 114  Q
    |||||||| || ||||| |||||| || |||||||||||||||| |||| | | |||||||||||| ||| ||  ||||| ||||||||| ||||    
T  37419821 atcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 2438719 - 2438778
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    ||||| ||||||||||||||||||| |||||| | ||||||| |||| |||||| |||||    
T  2438719 cgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtc 2438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 21091775 - 21091676
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg-gtgtgtatccatgcttcat 144  Q
    |||||||||||||||||| || ||| | ||||| | |||| |||||| ||||||  |||||||| ||||| ||||||| | || ||||||| ||||||||    
T  21091775 gacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgtcttgtgtccgtgtttgtatccgtgcttcat 21091676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 21782833 - 21782888
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||||||| |||||| | ||||| |||||| ||||||||||||| |||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagt 21782888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 28412394 - 28412319
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||||| |||||| | ||||| |||||| |||| | |||| ||||||| ||| ||||||| |||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgt 28412319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 11223864 - 11223922
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    |||| ||||||||||||||||||| |||||| | |||||||||||  |||||| |||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtc 11223922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 15657924 - 15657834
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtg 128  Q
    |||||| ||||| ||||||||||||| |||||| | |||||| ||||| |||||  | |||| ||||| ||| ||||||| ||||| ||||    
T  15657924 acgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtg 15657834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 18422022 - 18421944
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||| ||||||||||||||||||| |||||| | || |||| |||| ||||   |||||| ||||||||| |||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgt 18421944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 29664054 - 29663984
Alignment:
Q  54 taattacactaaattatatc-attttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||||||| ||||||||  |||||||||||| ||||||| ||||||| ||||||| || |||| |||||    
T  29664054 taattacactgaattatatatattttttcaaattattagcactgtcgacatgtcagtgtctgtgtcgtgtc 29663984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 38117167 - 38117229
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||||||||||||||  || ||| | |||||||||||| |||||| |||||| |||||||||    
T  38117167 acacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagt 38117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 26769588 - 26769503
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||||| |||||||| | |||| |||||||||||||||||| | || || | || ||||||||| |||||  |||||| ||||||    
T  26769588 tcgtgtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtc 26769503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 37986821 - 37986768
Alignment:
Q  56 attacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||||| || |||||||||||||||||| |||| | |||||| |||||||||    
T  37986821 attacactcaaatatatcattttttcaaattattatctgtgtcggcgtgtcagt 37986768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 41047896 - 41047855
Alignment:
Q  76 tttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||||||||| |||| |||||||||||||||||| |||||||    
T  41047896 tttttcaaattattatcagtgtcgacgtgtcagtttccgtgt 41047855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 21624326 - 21624242
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattat-atcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    ||||| ||||||||||||||||||| ||||||  |  |||||| |||| |||||| |||||| ||||||||| || |||| ||||    
T  21624326 cgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgt 21624242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 30527601 - 30527653
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgt 97  Q
    |||||| | ||||||||||||||||||| ||||| |||||| |||| ||||||    
T  30527601 cgacacatataattacactaaattatatgattttctcaaattattaacagtgt 30527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 8857 - 8767
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||| |||||| |||||| ||||||||| ||||||| ||||| |||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgt 8767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 9e-23; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 2572038 - 2572140
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || || || |||||| |||||||||||||||||||||||||| | |||||||||||| |||||  ||||||||||||| |||||||||| ||    
T  2572038 tcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgt 2572137  T
Q  121 gtc 123  Q
    |||    
T  2572138 gtc 2572140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 22652053 - 22651945
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || ||||| |||||| ||||||||||||||| | | |||||| | |||||||||||| |||||| |||||| ||||||||| ||||||| ||    
T  22652053 tcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 22651954  T
Q  121 gtctggtgt 129  Q
    ||| |||||    
T  22651953 gtccggtgt 22651945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 20873128 - 20873044
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||| |||| |  ||||| ||||||||| ||||||| |||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtc 20873044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 29510286 - 29510394
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || ||||| || ||| ||||||||||||||| ||| |||| | | |||||||||||| |||||| |||||| ||||||||| ||||||| ||    
T  29510286 tcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 29510385  T
Q  121 gtctggtgt 129  Q
    ||| |||||    
T  29510386 gtccggtgt 29510394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 15816111 - 15816205
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    ||||||| || ||| | |||||| |||||||| ||||||||||||||||| | |||||||||||| |||||  |||||| ||||||||| |||||    
T  15816111 tcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 28745575 - 28745473
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || ||||| |||||||||||| ||||| ||||| | |||||| | | |||||||||| |||||||||||||| || ||| ||||||||| ||    
T  28745575 tcgtgtccgacaccgacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattagcagtgtcgatgtatcattatccgtgtcgt 28745476  T
Q  121 gtc 123  Q
    |||    
T  28745475 gtc 28745473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 4298887 - 4298970
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||| ||||||||||||||||| |||||||| | |||||||||||| |||| | |||||| ||||| |||||| |||| |||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtc 4298970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 8343033 - 8342978
Alignment:
Q  37 tacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagc 92  Q
    ||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||    
T  8343033 tacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 8342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 25566901 - 25566841
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    |||||| ||||||||||||||||||| |||||| | |||||||||||| |||||| |||||    
T  25566901 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 34897144 - 34897068
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    |||||||||||| | |||||||||| |||||| | ||||| |||||| |||||| ||||||||||||| || |||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 44067569 - 44067485
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||| ||||||||||  ||||| ||||||| |||||| |||| | |||||| ||||||||| || |||| |||||||||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgt 44067485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 8343377 - 8343322
Alignment:
Q  37 tacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagc 92  Q
    |||||||  ||||||||||||||||||||||||| | |||||||||||| ||||||    
T  8343377 tacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagc 8343322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 22197749 - 22197832
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||||||||||||||||| | | |||||||||| |||||| |||| | ||||| ||| || |||| ||||| |||||    
T  22197749 gacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgt 22197832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 4673435 - 4673509
Alignment:
Q  49 acttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||||||||||||| |||| ||| |||||||||||| |||| | |||||| ||||||||| || |||| |||||    
T  4673435 acttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtc 4673509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 22596045 - 22595983
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||||||||||||||| |||||| | ||||||| |||| |||||| |||||| |||||||||    
T  22596045 acacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagt 22595983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 30271300 - 30271366
Alignment:
Q  48 cacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccg 114  Q
    ||||||||||||||||  ||||| | |||||||||||| |||||| |||||| ||||||||| ||||    
T  30271300 cacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 36450762 - 36450832
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||||||||||||||| |||| | | |||||||||||| |||||  |||||| ||||||||| |||||||    
T  36450762 acacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgt 36450832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 13436957 - 13437034
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| |||||| |||||||||| |||||  | |||||| | |||||||||||| |||||| |||||| |||||||||    
T  13436957 accgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 13437034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 36934748 - 36934639
Alignment:
Q  20 atcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttg 119  Q
    |||||||| |||| ||| |||||  | |||| | |||||||| | |||||| | |||||||| ||| |||||| |||||||||||| ||| ||||||| |    
T  36934748 atcgtgtccgatatcgaaacgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcg 36934649  T
Q  120 tgtctggtgt 129  Q
    ||| ||||||    
T  36934648 tgtttggtgt 36934639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 41838131 - 41838208
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtct 124  Q
    ||||||||| || |||| |||||| | ||||||| |||| |||||| |||||||||||||||| ||||| | ||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtct 41838208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 4948711 - 4948659
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    ||||| ||||||||||||||||||| |||||| | |||||||||||| |||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 5813651 - 5813575
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    ||||| ||||||||||| |||||||||| ||| | | |||||||||| |||||| |||||| |||||| || |||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccgt 5813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 949285 - 949356
Alignment:
Q  60 cactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgtgt 131  Q
    |||| |||||| | |||||||||||| |||| | |||||||||| |||||||  |||| |||||||||||||    
T  949285 cacttaattatttgattttttcaaattattaactgtgtcgacgtatcagtatttgtgtcgtgtctggtgtgt 949356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 12570493 - 12570575
Alignment:
Q  23 gtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    |||||||| |||||||| |||||||||| | |||||||||| |||||| |  |||| | |||| |||||||||||| |||||||    
T  12570493 gtgtctgacaccgatac-acatcgacacatataattacacttaattatgtgtttttcttaaattattagcagtgtcaacgtgtc 12570575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 12936515 - 12936570
Alignment:
Q  63 taaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgtt 118  Q
    |||||||| | ||||| |||||| |||| || ||||||||||||||||||||||||    
T  12936515 taaattatgtgattttatcaaattattaacaatgtcgacgtgtcagtatccgtgtt 12936570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 13844596 - 13844663
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||| |||||| | |||||||||| |||||| | ||||| |||||| ||||||||||||| ||||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 24613579 - 24613510
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| ||||||||||||||||||| |||||| | | |||||||||| |||||| ||||||  ||||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtga-tttttcaaattattagctgtgtcggtgtgtcagt 24613510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 27213600 - 27213522
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||| | |||||||| | |||||| | ||||| | |||| ||||||||||||| |||||| |||||||||| |||||    
T  27213600 cgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtc 27213522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 21465489 - 21465412
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    ||||||| || || || |||||| | |||||||||||||||   |||||||| |||||||||||| |||||| |||||    
T  21465489 tcgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 29447092 - 29447177
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||||| || ||||| | |||| ||||||||||| ||||| | |||||| | ||||| |||||| |||||  |||||||||||||    
T  29447092 tcgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 40332244 - 40332191
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    ||||||||||||||||||| |||||| | ||||| |||||| ||| ||||||||    
T  40332244 cgacacttgtaattacactgaattatgtgattttctcaaattatttgcagtgtc 40332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 14731756 - 14731712
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    ||||||||||||||||| | ||||| |||||| ||||||||||||    
T  14731756 taattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 15023257 - 15023289
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattata 71  Q
    ||||||||||||||||||||||||| |||||||    
T  15023257 cgacatcgacacttgtaattacactgaattata 15023289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 24669492 - 24669408
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||| ||||||||||||||||||| |||||| | ||||  |||||| |||| | |||||  ||||||||| || |||| |||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtc 24669408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 31236583 - 31236651
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatcc 113  Q
    |||||| | |||||||| | |||||| | ||||| |||||| ||||||||||||| |||||| ||||||    
T  31236583 cgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 39954294 - 39954346
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||||||||||||||| | ||||| |||||| |||||| |||||| ||||||    
T  39954294 taattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 9e-23; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 8365501 - 8365626
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| |||||||| |||||| ||||||||||||||||||  |||||| | || ||||||||| |||||  |||||| ||||||||| ||||||| ||    
T  8365501 tcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgt 8365600  T
Q  121 gtctggtgt--gtatccatgcttcat 144  Q
    |||||||||  |||||| ||||||||    
T  8365601 gtctggtgtccgtatccgtgcttcat 8365626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 16766772 - 16766666
Alignment:
Q  23 gtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    ||||| || ||||| |||||| ||||||||||||||||||| |||||| | |||||||||||| |||||| |||||| ||||||||| ||| ||| ||||    
T  16766772 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  123 ctggtgt 129  Q
    | |||||    
T  16766672 ccggtgt 16766666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 7938174 - 7938085
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||| ||| ||| ||||| |||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgt 7938085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 7977830 - 7977914
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||| ||||||||||||||||||| |||||| | |||||||||||| |||||| |||||| ||||||||||||| ||| |||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtc 7977914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 9107354 - 9107460
Alignment:
Q  23 gtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    ||||| || ||||| |||||| ||||||||||||||||||| |||| | | |||||||||||| |||||| |||||| ||||| ||| ||||||| ||||    
T  9107354 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  123 ctggtgt 129  Q
    | |||||    
T  9107454 ccggtgt 9107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 12696389 - 12696299
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||| ||||||  |||||||||||||||||| |||||| | |||||||||||| |||||| |||||| ||||||||| ||||||| |||||    
T  12696389 ccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 12696299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 17841589 - 17841667
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||| || ||||||||||||||||||||||| | |||||||||||| |||||| |||||| ||||||||| |||||||    
T  17841589 cgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 17841667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 853859 - 853949
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| |||||||||||||| |||| |||||| | |||||||||||| |||||  |||||| |||||||| |||||||| ||||| |||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgt 853949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 34595193 - 34595103
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| ||||||||||||||||||| |||||| | |||||||||||| |||||  |||||| ||||||| | ||||||| ||||| |||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgt 34595103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 426514 - 426598
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||| ||||||||||||||||| | |||||| | |||||||||||| |||| | |||||| ||||||||| ||||||| |||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtc 426598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 6327518 - 6327569
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataatta 90  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  6327518 cgacatcgacacttgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 8805587 - 8805662
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||||||||| | ||||| |||||| |||||||||| ||||||||| || || |||| |||||||||||    
T  8805587 taattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgt 8805662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 15489733 - 15489816
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||| ||||||||||||||||| | |||| | | |||||||||||| |||||  |||||||||||| ||| |||||||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 28715354 - 28715295
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||||| |||||| |||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtc 28715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 7086848 - 7086766
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggt 127  Q
    |||||| | ||||||||||||||||| | ||||| |||||| |||||||||| ||||||||| || || |||| |||||||||    
T  7086848 cgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggt 7086766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 9195736 - 9195830
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    ||||||| || ||| | |||||| |||||| | ||||||||||||||||| ||||||| |||||| ||||| |||||||| ||||  ||||||||    
T  9195736 tcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgttcgtatccgt 9195830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 13851794 - 13851712
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    ||||||||||| | |||||||||| |||||  | ||||| |||||| |||||| |||||||||||||||| ||||||| ||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 2224291 - 2224206
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgtt 118  Q
    |||| ||||| |||| | ||||||||||||| |||||||| ||||||| |||| |||||| | |||||| | ||||||||||||||    
T  2224291 ccgacacgacgtcgatatttgtaattacactgaattatatgatttttttaaattattagctgcgtcgacatatcagtatccgtgtt 2224206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 5970090 - 5970175
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||||| || ||||| |||||| | ||| ||||||||||||| |||||| | |||||||||||| |||| | |||||||||||||    
T  5970090 tcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtc 5970175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 6389785 - 6389712
Alignment:
Q  56 attacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||||||||||||||| |||||| |||| | |||||| ||||| ||| ||||||| ||||| |||||    
T  6389785 attacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgt 6389712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 7930365 - 7930257
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtg--tgtatcc 135  Q
    |||||| ||||||||| |||| ||||||||||| | |||||||||||| ||||   |||||| | ||||||| |||||  |||||| ||||  |||||||    
T  7930365 acgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggtgtctgtatcc 7930266  T
Q  136 atgcttcat 144  Q
    |||||||||    
T  7930265 atgcttcat 7930257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 10770673 - 10770758
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||| ||||||||||||||||||| |||||| | |||||||||||| |||||  |||| | ||||||||| ||| ||| |||||    
T  10770673 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtc 10770758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 8776981 - 8777057
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||||||||||||||| |||| | | |||||||||||| |||||  |||||| ||||||||| ||||||| |||||    
T  8776981 acacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 8777057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 25038077 - 25038149
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||| |||||||||||||||||||| | ||||| |||||| |||| | ||||| ||||||||||||| ||||    
T  25038077 cgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagtatctgtgt 25038149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 33001289 - 33001373
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||| |||||| | |||||||| | |||||| | |||||||||||| ||||||||||||| ||||||| |  ||||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtc 33001373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 10760841 - 10760918
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtg 116  Q
    ||||||||||||| ||| |||||| | ||| || ||||||| |||||| |||| |||||||||||||||||| ||||||    
T  10760841 acgacatcgacacgtgtgattacattcaat-atgtcattttctcaaattattatcagtgtcgacgtgtcagtgtccgtg 10760918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 16833361 - 16833283
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||||||||||||||||| || ||| | |||||||||||| |||||  |||||| ||||||||| || |||| |||||    
T  16833361 cgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 16833283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 17435250 - 17435180
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||||||||||||||| |||||| | ||||||| |||| ||||||  ||||||||| ||||| |||||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgt 17435180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 26562755 - 26562681
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||| ||||||||||||| | |||||||||| |||||| | ||||| ||||||  |||||||||||| ||||||    
T  26562755 accgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtc 26562681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 28152157 - 28152080
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||| ||||||||||||||||||| |||||| | | |||||||||| ||||||  ||||| ||||||||| |||||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagctttgtcggcgtgtcagtgtccgtgt 28152080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 7625166 - 7625097
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||| |||||||||||||||||| |||||| |||| | ||||||||||||| || || |||| |||||    
T  7625166 taattatactaaattatatcattttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtcgtgtc 7625097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 17168480 - 17168533
Alignment:
Q  56 attacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||||||||||||||||||||| |||||| |||| |||||| | |||||||||    
T  17168480 attacactaaattatatcattttctcaaattattatcagtgttggcgtgtcagt 17168533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 3209441 - 3209373
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatca-ttttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||| ||||||||||||| |||||||||||| | | ||||||||||| |||||| |||||| ||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtc 3209373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 4878002 - 4877918
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatca-ttttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    ||||| ||||||||||||||| ||| |||||| | | ||||||||||| |||||| ||||||  |||||| ||||||||| ||||    
T  4878002 cgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtgt 4877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 21395307 - 21395374
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    |||||| |||||||||||||||||||||||||| | ||||| |||||| |||||| |||| | ||||||    
T  21395307 acgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtc 21395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 31959212 - 31959148
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||||||||||||||||  ||||| | |||||||||||| |||||| ||| || |||||||||    
T  31959212 cgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagt 31959148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 403864 - 403915
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataatta 90  Q
    ||||| ||||||||||| |||||||||||||| | |||||||||||| ||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 7996393 - 7996448
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||||||| |||||||| ||||| |||||| ||||||||||||| | |||||||    
T  7996393 taattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagt 7996448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 8022408 - 8022353
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||||||| |||||||| ||||| |||||| ||||||||||||| | |||||||    
T  8022408 taattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagt 8022353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 1191702 - 1191760
Alignment:
Q  41 acatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    ||||||||||||||||||||||| |||| | | | |||||||||| |||||| ||||||    
T  1191702 acatcgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcg 1191760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 6898281 - 6898351
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| ||||||||||||||||||| |||||| | |||| ||||||| |||||  |||||  |||||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagt 6898351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 7801156 - 7801222
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgt 105  Q
    ||||| |||||||||||||||| || |||||| | |||||||||||| |||||  |||||| |||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgt 7801222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 8714057 - 8713971
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatca-ttttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||||| || ||||| |||||| | ||| ||||||||||||| |||||| | | ||||||||||| |||| | |||||||||||||    
T  8714057 tcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtcgacgtgtc 8713971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 10842574 - 10842524
Alignment:
Q  56 attacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||||||||||||| | |||||||||||| |||||| |||||| ||||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 34447374 - 34447448
Alignment:
Q  55 aattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||||||||||||| ||||| |||||| |||| | |||| | ||||||| | || ||||| ||||||||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgttggcgtgtcattgtctgtgttatgtctggtgt 34447448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 1681812 - 1681751
Alignment:
Q  44 tcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgt 105  Q
    |||||||||||||||||||| |||||  | |||||||||||| |||||  |||||| |||||    
T  1681812 tcgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgt 1681751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 7723243 - 7723320
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| |||||| ||| || | ||||||  || |||||||| ||||| |||||| |||||||||||| ||||||||||    
T  7723243 accgacacgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagt 7723320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 18252757 - 18252802
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataatta 90  Q
    |||||| ||||||||||||||||||| ||||||||| |||| ||||    
T  18252757 cgacacctgtaattacactaaattatgtcatttttttaaattatta 18252802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 19040396 - 19040339
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtat 111  Q
    |||||||||| |||||| | ||||| |||||| |||||| |||||| |||||||||||    
T  19040396 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 24614453 - 24614404
Alignment:
Q  55 aattacactaaattatatcattttttcaaataattagcagtgtcgacgtg 104  Q
    |||||||||||||||||| ||||||| |||| |||||| || ||||||||    
T  24614453 aattacactaaattatataatttttttaaattattagcggtatcgacgtg 24614404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 31384972 - 31384927
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    |||||||||||||||||| |||||| | |||||||||||| |||||    
T  31384972 gacacttgtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 32978899 - 32978972
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatat-cattttttcaaataattagcagtgtcgacgtgtcagtat 111  Q
    ||||| ||||||||||||||||||| |||||| |   ||||||||||| |||||| |||||| |||||| ||||    
T  32978899 cgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtcggcgtgtccgtat 32978972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 33303685 - 33303628
Alignment:
Q  72 tcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||||||||| ||||  |||||||| |||||||| ||||| | |||||||||||    
T  33303685 tcattttttcaaattattattagtgtcgatgtgtcagtgtccgtatcgtgtctggtgt 33303628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 5732510 - 5732594
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||| |||||| | ||||||||||||| ||| | ||||| |||||| |||| | |||||| ||||||||| ||| ||| |||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtc 5732594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 9025493 - 9025553
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    |||||| |||||| | |||||||||| |||||| | ||||| |||||| ||||||||||||    
T  9025493 acgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 24138466 - 24138426
Alignment:
Q  58 tacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    |||||| |||||||| |||||||||||| ||||||||||||    
T  24138466 tacacttaattatatgattttttcaaattattagcagtgtc 24138426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 46348383 - 46348461
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||| |||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 46348461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 5927347 - 5927430
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||||||   ||||||||| ||||||| ||||| |||||    
T  5927347 gacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgt 5927430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 48450593 - 48450671
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||||||||||||||||||||||| | |||||||||||| |||||| |||| | ||||||||| ||||||| |||||    
T  48450593 cgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtc 48450671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 1486703 - 1486787
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||| |||||| |||||||| |||||||||| |||||| | |||||||||||| |||||| |||||  |||||||||||||||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgt 1486787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 6612150 - 6612261
Alignment:
Q  18 atatcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||||||||| || | ||| |||||| ||||||||||||||||||| |||||| | |||||||||||| |||| | || ||| ||||||| | |||||||    
T  6612150 atatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgt 6612249  T
Q  118 tgtgtctggtgt 129  Q
     ||||| |||||    
T  6612250 cgtgtccggtgt 6612261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 22881616 - 22881686
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||| |||||  |||||| |||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 22881686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 38078661 - 38078731
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| ||||||||||||||||| | |||||| | |||||||||||| |||||| ||||||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagt 38078731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 40917815 - 40917720
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| |||||| ||| ||||||||||||||| |||| |   |||||||||||| |||||| |||||| ||||||||||||||||| ||||| |||||    
T  40917815 accgacacgacaccgagacttgtaattacacttaattgtg--attttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgt 40917720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 22515887 - 22515964
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtg 116  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||| |||||| |||||  |||||| || ||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 41877470 - 41877558
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggt 127  Q
    ||||| |||||||||||||||||||||||||| | ||||| |||||| |||||| |||||| |||  |||| || |||| |||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggt 41877558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 398780 - 398855
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||||| |||||| | |||||||||||| |||||| |||||| ||||||||| ||||||| ||||| |||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgt 398855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 42359449 - 42359532
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    ||||| ||||||||||||||||||| |||| | | |||||||||||| |||||  |||||  ||||||||| ||||||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgt 42359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 113359 - 113289
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcag 108  Q
    |||||| | ||||||||||||||||| |||||| | |||||||||||| |||||| |||||| ||||||||    
T  113359 acgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 28273070 - 28273140
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    ||||||| || | ||||| |||| ||||||||||||||||||| |||||||| |||||||||||| |||||    
T  28273070 tcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaatgattag 28273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 47989574 - 47989469
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || ||||| |||||| ||||||||||||||||||| |||||| | ||||||| |||| ||||   |||||| ||||||||| || |||| ||    
T  47989574 tcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgt 47989476  T
Q  121 gtctggt 127  Q
    |||||||    
T  47989475 gtctggt 47989469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 18556466 - 18556534
Alignment:
Q  49 acttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||||||||||| |||||||| | || ||||||||| |||||| |||||| ||||||||| |||||||    
T  18556466 acttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 18556534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 1815315 - 1815240
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    |||| ||||||||||||||||||| |||||| | ||||||| |||||||||   |||||| ||||||||| |||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 18190109 - 18190160
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| |||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 8010270 - 8010340
Alignment:
Q  22 cgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagc 92  Q
    ||||||| | ||||| || |||||||||||| |||||| ||| |||||||| |||||||||||| ||||||    
T  8010270 cgtgtctcacaccgacacaacatcgacacttataattatactgaattatataattttttcaaattattagc 8010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 2896140 - 2896205
Alignment:
Q  58 tacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||| |||||| | ||||| |||||| |||||| |||||| ||||||||| |||||||||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtc 2896205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 14359529 - 14359605
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||||||||||||||||||||||| | | |||||||||| |||||| |||||| |||||| || || |||| |||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtc 14359605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 15449215 - 15449272
Alignment:
Q  22 cgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttt 79  Q
    |||||| || ||||||||||||  ||||||||||||||||||||||||| | ||||||    
T  15449215 cgtgtccgacaccgatacgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 24577185 - 24577238
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    |||||| ||||||||||||||||||| |||||| | |||||||||||| |||||    
T  24577185 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 24577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 3490396 - 3490460
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||||||||||||||||| ||| || |  |||| |||||| ||||||||||||| |||||||||    
T  3490396 cgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagt 3490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 16297295 - 16297359
Alignment:
Q  51 ttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    ||||||||||||| |||| | | ||||||||| || ||| || ||||||||||||||||||||||    
T  16297295 ttgtaattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgt 16297359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 16927200 - 16927268
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    |||||||||| |||||||| |||||||||||| ||||||  || |||||||||||| || |||| ||||    
T  16927200 taattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgt 16927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 19058856 - 19058924
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtca 107  Q
    ||||| ||||||||||||||||||| |||||| | || |||| |||| |||||| |||||| |||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtca 19058924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 37055866 - 37055926
Alignment:
Q  49 acttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||||||||||||||||||| | ||||| |||||| ||||||||| |||| || |||||    
T  37055866 acttgtaattacactaaattatgtaattttctcaaattattagcagtatcgatgtatcagt 37055926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 39130767 - 39130874
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt--gtatcca 136  Q
    ||||| |||||| | ||||||||||||||||||| ||||| | |||| ||||  ||||||  ||||||| ||||| ||| ||||| |||||  ||||||     
T  39130767 cgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccg 39130866  T
Q  137 tgcttcat 144  Q
    ||||||||    
T  39130867 tgcttcat 39130874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 9103698 - 9103624
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccg 114  Q
    ||||| ||||||||||| ||| |||||||||| | |||||||||||| |||| | |||||| ||||||||| ||||    
T  9103698 cgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccg 9103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 15323215 - 15323132
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||  |||||||||||||||| | |||||||||||| |||| | || ||||| ||||||| ||| ||| ||||| |||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgt 15323132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 34298480 - 34298405
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||||| |||||| | ||||| |||||| |||||  ||||||  |||||||| ||||||| |||||||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgt 34298405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 18337388 - 18337342
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaat 85  Q
    ||||| ||||||||||||||||||| |||||| | ||||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaat 18337342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 21378631 - 21378577
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    ||||||||||||||||||| |||||| | |||||||||| | |||||| ||||||    
T  21378631 cgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcg 21378577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 31672895 - 31672965
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| ||| ||||||||||||||| |||||  | |||||||||||| |||||| ||||||  ||||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagt 31672965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 40258934 - 40258984
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataatta 90  Q
    |||| ||||||||||||||||||| |||||| | |||||||||||| ||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 1704991 - 1705044
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    |||||| |||||||||||||||| || |||||| | |||||||||||| |||||    
T  1704991 acgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattag 1705044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 9630635 - 9630687
Alignment:
Q  94 gtgtcgacgtgtcagtatccgtgttgtgtctggtg--tgtatccatgcttcat 144  Q
    |||||| ||||||||| ||||||||||||||||||  ||||||| ||||||||    
T  9630635 gtgtcggcgtgtcagtgtccgtgttgtgtctggtgtctgtatccgtgcttcat 9630687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 9656781 - 9656834
Alignment:
Q  56 attacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||| | ||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  9656781 attacattcaattaaatcattttttcaaattattaacagtgtctacgtgtcagt 9656834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 31694694 - 31694782
Alignment:
Q  23 gtgtctgataccgatacgacatcgacacttgtaattacactaaattatatca--ttttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| || ||||| |||||| ||||||||||||||| ||| |||||| | |  ||||||||||| ||||||  ||||||||| |||||    
T  31694694 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagt 31694782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 34257925 - 34257986
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    ||||||||||||||||| | ||||| | |||| |||| | |||||||||||||| |||||||    
T  34257925 taattacactaaattatgtgattttattaaattattaacggtgtcgacgtgtcaatatccgt 34257986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 48040467 - 48040552
Alignment:
Q  45 cgacacttgtaattacactaaattatatca-ttttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||| |||||||||| ||| | |  |||||||||| |||| | |||||| ||||||||| ||||||| ||||| |||||    
T  48040467 cgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgt 48040552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 2218299 - 2218267
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattat 70  Q
    |||||| ||||||||||||||||||||||||||    
T  2218299 acgacaccgacacttgtaattacactaaattat 2218267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 5944343 - 5944256
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcatttttt--caaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||| |||||||| |||||||||| |||||| | |||||||  ||||| |||||| ||| || ||||||||| || |||| |||||    
T  5944343 acgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtc 5944256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 13011223 - 13011299
Alignment:
Q  47 acacttgtaattacactaaattatatca-ttttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    ||||||||||||||||| |||||| | | ||||||||||| |||||| |||||| | ||||||| | ||||| ||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgt 13011299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 22794084 - 22794148
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||| | ||||||||||  ||||| |||||||||||||| |||| | |||| |||||||||||    
T  22794084 cgacacctataattacactgtattatgtcattttttcaaattattatccgtgttgacgtgtcagt 22794148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 26837757 - 26837793
Alignment:
Q  54 taattacactaaattatatcattttttcaaataatta 90  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  26837757 taattacactaaattatattattttttcaaattatta 26837793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 31015096 - 31015044
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgt 97  Q
    ||||||||||||||||||| |||||| | ||||| |||||| |||||| ||||    
T  31015096 cgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgt 31015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 32461471 - 32461515
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    ||||||||||||||| |||||||| | |||||||||||| |||||    
T  32461471 acacttgtaattacattaaattatgtgattttttcaaattattag 32461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 9408313 - 9408385
Alignment:
Q  18 atatcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataatta 90  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||||    
T  9408313 atatcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 24339719 - 24339611
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || ||||| |||||| ||||||||||||||||||| |||||| | |||||||||||| |||||| |||||| ||||||| | ||| ||| ||    
T  24339719 tcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgt 24339620  T
Q  121 gtctggtgt 129  Q
    ||| |||||    
T  24339619 gtccggtgt 24339611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 144
Target Start/End: Complemental strand, 27945101 - 27944993
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt--gtatcc 135  Q
    |||||| ||||||||||||||||||| |||||| | ||||| |||||| |||||  |||||| ||||||||| ||||||| ||||| |||||  ||||||    
T  27945101 acgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatcc 27945002  T
Q  136 atgcttcat 144  Q
     ||||||||    
T  27945001 gtgcttcat 27944993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 13770756 - 13770666
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||| |||||| ||||||||||||||||||| |||||| | ||||||| |||| |||||| |||||| ||| ||||| ||||||| |||||    
T  13770756 ccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtc 13770666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 26733363 - 26733273
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| |||||| | |||||| ||| |||||| | ||||| |||||| |||||| |||||||||||||||| ||||||| |||||||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgt 26733273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 11061077 - 11061154
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||| ||||||||||||||| |||||||||| | |||||||||||| |||||| ||||||  |||||||| |||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgt 11061154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 11831509 - 11831424
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||||| || ||||||||||||   | |||||||||||||||||||||||| |||||||||||| |||||  ||||||| |||||    
T  11831509 tcgtgtccgacaccgatacgacacgaatacttgtaattacactaaattatatgattttttcaaattattagttgtgtcgatgtgtc 11831424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 25481953 - 25481877
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||||||||||||||| |||||| | |||||||||||| |||||| |||||| ||||||| | ||| |||||||||    
T  25481953 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtc 25481877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 21864867 - 21864758
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatca--ttttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg--gtgtgtatc 134  Q
    ||||| |||||||||||||||||||||||||||| |  ||||||||||| |||||| |||||   ||||| || ||||||| ||||| |  |||||||||    
T  21864867 cgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccgatgtgtgtatc 21864768  T
Q  135 catgcttcat 144  Q
    | ||||||||    
T  21864767 cgtgcttcat 21864758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 24105731 - 24105653
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||||||||||||||||| ||| ||   |||||||||||| |||||| |||||| ||||||||| ||||||| |||||    
T  24105731 cgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 24105653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 5236030 - 5235961
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||||||||||||||||| ||||| | |||| |||||| |||||||||||||||| || |||| |||||    
T  5236030 taattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtc 5235961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 21560582 - 21560521
Alignment:
Q  19 tatcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcatttttt 80  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||| |||||| | |||||||    
T  21560582 tatcgtgtttgacaccgatacgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 25822732 - 25822647
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| |||| |    ||||||||||| |||||  |||||| ||||||    
T  25822732 tcgtgtccgataccgatacgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgtc 25822647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 43027468 - 43027553
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||| ||||||||||| |||||||  ||||| | |||||||||||| |||||| | |||| ||||||||| ||||||| |||||    
T  43027468 acgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtc 43027553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 26033446 - 26033514
Alignment:
Q  24 tgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagc 92  Q
    ||||||| ||||| |||| | ||||||||||||||||||| |||||| | |||||||||||| ||||||    
T  26033446 tgtctgacaccgacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Original strand, 7328690 - 7328757
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgt 105  Q
    |||||| |||||| | ||||||||||||||||| | ||||| |||||| ||||||||| |||||||||    
T  7328690 acgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgt 7328757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 4017800 - 4017878
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||||| | |||||||||||||||||| |||| |||||| |||| | |||||| |||||| || ||||||| |||||    
T  4017800 cgacacttatgattacactaaattatatcgttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtc 4017878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 2034481 - 2034416
Alignment:
Q  58 tacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||||||||||||| || || |||||| |||||  |||||||||||| ||||||||||| |||||    
T  2034481 tacactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtc 2034416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 14077440 - 14077517
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    |||||||| |||||| | |||||||| | ||||||||||||||||||  || ||||||||| ||| ||||||| ||||    
T  14077440 cgacacttataattatattaaattatgttattttttcaaataattaggggtatcgacgtgtaagtgtccgtgtcgtgt 14077517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 14387468 - 14387545
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    |||||||| |||||| | |||||||| | ||||||||||||||||||  || ||||||||| ||| ||||||| ||||    
T  14387468 cgacacttataattatattaaattatgttattttttcaaataattaggggtatcgacgtgtaagtgtccgtgtcgtgt 14387545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 5409830 - 5409906
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||| |||||| |||||||||||||| |||| |||||| | |||||||||||| |||||| || ||  |||||||||    
T  5409830 ccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagt 5409906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 7197297 - 7197365
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtca 107  Q
    ||||| ||||||||||||||||| | ||||| || ||||||| |||| |||||| |||||| |||||||    
T  7197297 cgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtca 7197365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 7438783 - 7438695
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||| ||| ||||| | |||| ||||||||||||||||| | |||||| | |||||||||||| |||| | |||||| | |||||||    
T  7438783 tcgtgtttgacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagt 7438695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 1885633 - 1885542
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||| |||||||||| |||||| | |||||| |||||||||||||   ||| | ||||||| ||||| ||||| |||| ||||| |||||    
T  1885633 acgacaccgacacttgtgattacattgaattatgtcattttttcaaaattttatccgtgtcgatgtgtccgtatcagtgtcgtgtccggtgt 1885542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 5956317 - 5956246
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg 125  Q
    |||||||| |||||||| | ||||||| |||| ||||| ||| ||| ||||||||||||| ||| |||||||    
T  5956317 taattacattaaattatttgatttttttaaattattaggagtatcggcgtgtcagtatccatgtcgtgtctg 5956246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 18215185 - 18215264
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||||| |||||||||||| ||||||  ||||| | |||||||||||| |||||| | |||| ||||| ||| |||||||    
T  18215185 acgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgtgt 18215264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 2334310 - 2334268
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcatttttt 80  Q
    |||||| |||||||||||||||||||||||||| | |||||||    
T  2334310 acgacaccgacacttgtaattacactaaattatgtgatttttt 2334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 11272569 - 11272619
Alignment:
Q  22 cgtgtctgataccgatacgacatcgacacttgtaattacactaaattatat 72  Q
    |||||| || ||||| |||||| ||||||||||||||||||| ||||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatat 11272619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 15680868 - 15680798
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| |||||||| ||||||||||||||||| | |||||||  ||| ||||||  ||||| |||||||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagt 15680798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 15902899 - 15902797
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| |||||||| || ||| |||||| | ||||||||||||||||| | ||||| |||||| ||||   |||||| | ||||||| || |||| ||    
T  15902899 tcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgt 15902800  T
Q  121 gtc 123  Q
    |||    
T  15902799 gtc 15902797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 28155629 - 28155563
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgt 105  Q
    ||||| ||||||||||||||||||  |||||| | ||||| |||||| |||||| |||||| |||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 3991384 - 3991331
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    |||||| ||||||||||||||| ||| |||||| | |||||||||||| |||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattattag 3991331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 7058486 - 7058433
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    |||||| | ||||||||||||||||| ||||| || |||||||||||| |||||    
T  7058486 acgacaccaacacttgtaattacactgaattacatgattttttcaaattattag 7058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 9778565 - 9778500
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    |||| |||||| ||||||||||||||| ||| |||||| | |||||||||||| || ||| |||||    
T  9778565 ccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgtc 9778500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 11665441 - 11665514
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatcc 113  Q
    ||||||||||||| |||||| ||| |||||| | |||||||||||| |||||  |||||  ||||||| |||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgtcaatatcc 11665514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 21880211 - 21880158
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagc 92  Q
    ||||| ||||||||||||||||||| |||||| | ||||| |||||| ||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 18039065 - 18039017
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcatttttt 80  Q
    ||||| |||||| ||||||||||||||||||| |||||| | |||||||    
T  18039065 accgacacgacaccgacacttgtaattacactgaattatgtgatttttt 18039017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 122
Target Start/End: Complemental strand, 21930688 - 21930605
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    |||||||||||||||||||||| | | |||||| | ||||||| |||| |||||| | |||| ||||||||| ||| | ||||||    
T  21930688 acgacatcgacacttgtaattaaaatgaattatctaatttttt-aaattattagctgagtcggcgtgtcagtgtccatattgtgt 21930605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 43243137 - 43243105
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattat 70  Q
    |||||||||||||||||||||||| ||||||||    
T  43243137 acgacatcgacacttgtaattacattaaattat 43243105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 14674322 - 14674250
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||||||||||||||||||||||||| | |||||||||||| |||||| |||||| ||||||||| |||||||    
T  14674322 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 14674250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 21522827 - 21522720
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || ||||| |||||| ||||| ||||||||||||| |||||| | ||||||| |||| |||||| |||||| ||||||||| ||||||| ||    
T  21522827 tcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 21522728  T
Q  121 gtctggtg 128  Q
    ||| ||||    
T  21522727 gtccggtg 21522720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 21533393 - 21533286
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || ||||| |||||| ||||| ||||||||||||| |||||| | ||||||| |||| |||||| |||||| ||||||||| ||||||| ||    
T  21533393 tcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 21533294  T
Q  121 gtctggtg 128  Q
    ||| ||||    
T  21533293 gtccggtg 21533286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 21191056 - 21191146
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| ||||||||||||||||||| |||||| | |||||||||||| |||||| |||||| | ||||||| ||||||| ||||| |||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgt 21191146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 43001851 - 43001781
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||||||||||||||| |||||| | |||||||||||| ||||||||||||||| ||||||| |||||||    
T  43001851 acacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgt 43001781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 19579778 - 19579670
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || || || |||||| |||||||||||||| ||||||||||| | ||||| |||||| |||||| |||||| ||| ||||| ||||||||||    
T  19579778 tcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgt 19579679  T
Q  121 gtctggtgt 129  Q
     || |||||    
T  19579678 atccggtgt 19579670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 31084388 - 31084312
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||| |||||||||||||||||||||||| | |||||| | |||||||||||| |||||| |||||| |||||||||    
T  31084388 ccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 31084312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 13287398 - 13287489
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||| ||||||||||| ||||||| |||||| | |||||||||||| |||| | |||||||||||| ||| ||||||| ||||| |||||    
T  13287398 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgt 13287489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 41633801 - 41633710
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||||||||| ||||| ||||||||||||| |||||| | | |||||||||| |||||| ||||||  ||||||||||| |||| |||||    
T  41633801 accgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagtatctgtgtggtgtc 41633710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 39698618 - 39698524
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    ||||||| || ||||| ||||||  |||||||||||||||||| |||||| | |||||||||||| |||||| |||||  ||||||||| |||||    
T  39698618 tcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 144
Target Start/End: Complemental strand, 22013458 - 22013366
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt--gtatccatgcttcat 144  Q
    ||||||||||||||||| | |||||| ||||| |||||| |||||| ||||||||| ||||||| ||||| |||||  |||||| ||||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcat 22013366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 19552530 - 19552626
Alignment:
Q  24 tgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    ||||||| ||||| ||||||||||||||| ||  |||||| |||||| | |||||||||||| |||| | |||||| ||||||||| ||||||| ||||    
T  19552530 tgtctgacaccgacacgacatcgacacttata--tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 24906307 - 24906390
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtg 128  Q
    ||||||||||||||||||| |||||| |||||||||||||| |||| | |||| | ||||||||| | ||||| ||||| ||||    
T  24906307 cgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccggtg 24906390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 6247681 - 6247611
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| ||||||||||||||||||| |||||| | |||||||||||| |||||  |||||| |||||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagt 6247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 16304440 - 16304514
Alignment:
Q  55 aattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||||||||||||| |||| |||||||||| ||| |||||| ||||||||||||  ||| ||||| |||||    
T  16304440 aattacactaaattatatgatttattcaaataatcagcggtgtcggcgtgtcagtatctatgtcgtgtccggtgt 16304514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 21576745 - 21576803
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgt 97  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||| |||||| ||||    
T  21576745 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 33178084 - 33178014
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| |||||||||||||||||||||||||| | ||||||| |||| |||||  |||||| |||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 15382538 - 15382446
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcatttttt--caaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| ||||||||||||||| ||| |||||||| |||||||  ||||| |||||| |||||| ||||||| | ||||||| ||||| |||||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgt 15382446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 21319926 - 21319990
Alignment:
Q  20 atcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaa 84  Q
    |||||||| || ||||| | ||||||||||||||| |||||| | ||||||||||||||||||||    
T  21319926 atcgtgtccgacaccgacatgacatcgacacttgtgattacattgaattatatcattttttcaaa 21319990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 21542107 - 21541999
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || ||||| |||||| ||||||||||||||||||| |||||| | || |||| |||| |||||  |||||| | ||||| | || |||| ||    
T  21542107 tcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgt 21542008  T
Q  121 gtctggtgt 129  Q
    |||||||||    
T  21542007 gtctggtgt 21541999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 6326304 - 6326381
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    |||||||||||||||||| |||||| | ||||| |||||| | ||||  ||||| ||||||||| ||||||| |||||    
T  6326304 gacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtc 6326381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 7677781 - 7677704
Alignment:
Q  22 cgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    |||||| || ||||| |||||| |||||||| ||||| |||| |||||| | |||||||||||| |||||| ||||||    
T  7677781 cgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 7218273 - 7218341
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatcc 113  Q
    ||||||||||||||||||| |||||| | |||| || |||| ||||||  |||||||||||| ||||||    
T  7218273 cgacacttgtaattacactgaattatgtgatttatttaaattattagctctgtcgacgtgtccgtatcc 7218341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 8420086 - 8420018
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtca 107  Q
    ||||| ||||||||||||||||| | |||||| | |||||||||||| ||||||  ||||| |||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtca 8420018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 39205924 - 39205872
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    |||||||||  |||||||| ||||| |||||| ||||||||||||||||||||    
T  39205924 taattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtc 39205872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 41091256 - 41091316
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    ||||||||||||| | |||||||||| |||||| | ||||| |||||| ||||||||||||    
T  41091256 acgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 42893418 - 42893359
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    |||| |||||||||||||||||||  ||||| | |||||||||||| |||||| ||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcg 42893359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 5894827 - 5894885
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    |||| |||||| ||||||||||| ||| | |||||||||| |||||||||||| |||||    
T  5894827 ccgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattag 5894885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 16203795 - 16203873
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||| |||||| | |||||||||||||||||   ||||| |||||| ||||||||||||| | ||| ||| |||||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgt 16203873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 34879409 - 34879331
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||||||||||| | | |||||||| |||||||| ||||| ||||||  ||||| ||| || |||||| ||||||||||    
T  34879409 cgacatcgacacatattattacactgaattatatgattttctcaaatttttagcggtgccggcgtgtccgtatccgtgt 34879331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 37328825 - 37328927
Alignment:
Q  20 atcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttg 119  Q
    |||||||| || ||||| |||||| |||||| |||||||||||| |||| | | |||||| ||||| ||| || ||||||  || ||||| ||||||| |    
T  37328825 atcgtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcg 37328924  T
Q  120 tgt 122  Q
    |||    
T  37328925 tgt 37328927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 42469263 - 42469197
Alignment:
Q  56 attacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    ||||||||||| ||| ||||||| |||||| |||| | |||||| ||||||| ||||||||| ||||    
T  42469263 attacactaaaatatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgt 42469197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 4105310 - 4105238
Alignment:
Q  47 acacttgtaattacactaaattatatcat--tttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||||||||||||||| |||||| | ||  |||||||||| |||||   ||||| |||||||||||||||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgt 4105238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 8044260 - 8044317
Alignment:
Q  19 tatcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcatt 76  Q
    ||||||||| || ||||| |||||||  |||||||||||| || ||||||||||||||    
T  8044260 tatcgtgtccgacaccgacacgacataaacacttgtaattccattaaattatatcatt 8044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 10298634 - 10298553
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccg 114  Q
    ||||||||||| ||||||||||||||||| |  ||||| | | |||||||||| |||||  |||||| ||||| ||| ||||    
T  10298634 ccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccg 10298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 15405062 - 15405107
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    |||||||||||||||| | |||||||| |||||||||||| |||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattag 15405107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 25863257 - 25863212
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataatta 90  Q
    |||||||| |||||||||| |||||||||||||| |||||| ||||    
T  25863257 cgacacttataattacactgaattatatcattttctcaaattatta 25863212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 7997172 - 7997236
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    |||||||| ||||||||||  ||||||||||||| |||||| |||| | |||| | |||||||||    
T  7997172 cgacacttataattacactgtattatatcattttctcaaattattatccgtgttggcgtgtcagt 7997236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 12264811 - 12264887
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgt 97  Q
    |||| ||||| ||||||| ||||| ||||| | |||||||||| ||| || | ||||| ||||||||||||| ||||    
T  12264811 tcgtatctgacaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaataattagcggtgt 12264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 17177029 - 17177113
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||||||||| | |||| | | |||||||||||| |||||| |||| | ||| ||||| |||| || || ||||||||    
T  17177029 cgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgt 17177113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 30183626 - 30183518
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    |||||||||||||| | |||||| ||||||||||||||| ||  ||| || | || ||||||||| |||||  |||||| | | ||||| || || ||||    
T  30183626 tcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcggcatatcagtgtctgtattgt 30183527  T
Q  121 gtctggtgt 129  Q
    |||| ||||    
T  30183526 gtctagtgt 30183518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 28918061 - 28917970
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||| ||||||||||||||||||| |||||| | |||||||||||| ||||||  ||||| ||||||||| ||||||| ||||| |||||    
T  28918061 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgt 28917970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 1509614 - 1509539
Alignment:
Q  23 gtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    ||||| || ||||| |||||| |||||||||||||||||||||||||| | |||||||||||| |||||| |||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 14216944 - 14216865
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg 125  Q
    |||||||||||||||||| |||||||| || |||| |||| |||||  |||||||||||||||| ||||||| |||||||    
T  14216944 gacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtctg 14216865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 14223073 - 14222994
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg 125  Q
    |||||||||||||||||| |||||||| || |||| |||| |||||  |||||||||||||||| ||||||| |||||||    
T  14223073 gacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtctg 14222994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 15796293 - 15796384
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||| ||||| ||||||||||||| |||||||| |||||||||||| |||| | |||||| ||||||| | ||||||| ||||| |||||    
T  15796293 acgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgt 15796384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 55401134 - 55401056
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||| |||||  |||||| ||| ||||| |||||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgt 55401056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 4990950 - 4991050
Alignment:
Q  22 cgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtg 121  Q
    ||||||||||||| | |||||  ||||||||||||||||||| |||||| | ||||| |||||  |||||| ||||||  |||||||| ||||||| |||    
T  4990950 cgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtg 4991049  T
Q  122 t 122  Q
    |    
T  4991050 t 4991050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 26492205 - 26492289
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||| ||| ||||||||||||||| |||| ||| |||||||||||| ||||||  ||||| ||||||||| ||||||| |||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtc 26492289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 3164024 - 3164115
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||| ||||||||  ||||||| |||||| | |||||||||||| |||||| ||||||||||| || | ||||||| ||||| |||||    
T  3164024 acgacatcaacacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgt 3164115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 10268493 - 10268556
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||||||||||||||||||||||| | |||||||||||| |||| | |||||| |||||||||    
T  10268493 gacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagt 10268556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 11610573 - 11610494
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg 125  Q
    ||||||||||| |||||| |||||| | ||||||| |||| |||||| |||| | |||||||||||| ||||||||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtatctgtgttgtgtctg 11610494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 14832176 - 14832081
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtg 116  Q
    ||||||| |||||||| ||||||  |||||||||||||||| | | |||| | |||||||||||| |||||| || ||| |||||| |||||||||    
T  14832176 tcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatccgtg 14832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 26508163 - 26508096
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatc 112  Q
    ||||||||||||||||||| |||||| | |||||||||||| |||||| |||||  ||||||||||||    
T  26508163 cgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatc 26508096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 4987299 - 4987361
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||||||||||||||| |||||| | |||||||||||| |||||| |||||| |||||||||    
T  4987299 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 8587021 - 8587099
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||| ||||||||||||||||||| |||||| | |||||||||||| | |||  |||||| ||||||||| |||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgt 8587099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 10335286 - 10335376
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| ||||||||||| |||||||||| ||| | | |||||||||| |||||  |||||| ||||||||| ||||||| ||||| |||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgt 10335376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 34910383 - 34910309
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    |||||||||||| |||| |||||||||||||| |||||| | |||||||||||| |||||  |||||| ||||||    
T  34910383 accgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 20503518 - 20503454
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||| |  |||||| |||||||||    
T  20503518 cgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagt 20503454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 41961632 - 41961740
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| |||||||| |||||| ||||||||||||||||||  ||| || | || ||||||||| |||||  ||| || ||||||||| || |||| ||    
T  41961632 tcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgt 41961731  T
Q  121 gtctggtgt 129  Q
    ||| |||||    
T  41961732 gtccggtgt 41961740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 14747637 - 14747550
Alignment:
Q  23 gtgtctgataccgatacgacatcgacacttgtaattacactaaattatatca-ttttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| ||||| || ||||||  ||| ||||||||||||||||||||| | | ||||||||||| |||||| |||||| |||||||||    
T  14747637 gtgtcggatacagacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagt 14747550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 25064953 - 25064878
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||||||||| | |||||||||||| |||||| |||||| ||||||| | || |||| ||||| |||||    
T  25064953 taattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgt 25064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 28812594 - 28812507
Alignment:
Q  19 tatcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    |||||||||||| ||| | |||||| |||||||||||| |||||| |||||| | |||| ||||||| |||||  |||||| ||||||    
T  28812594 tatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc 28812507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 10955011 - 10954941
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| |||||||||| |||||||| |||||| | |||||||||||| |||||  |||||| |||||||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagt 10954941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 15864875 - 15864825
Alignment:
Q  56 attacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    |||||||||||||||||||||||||||||| |||| | |||||| ||||||    
T  15864875 attacactaaattatatcattttttcaaattattatccgtgtcggcgtgtc 15864825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 21479177 - 21479107
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| ||||||| ||||||||||| |||| | | |||||||||||| |||||| |||||| |||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagt 21479107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 49651780 - 49651846
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    |||| |||||| ||||||||||||||||| | |||||| | |||||||||||| |||||| ||||||    
T  49651780 ccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcg 49651846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 750600 - 750709
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc-agtatccgtgttg 119  Q
    ||||||| |||||||| |||||| |||||||||||||| ||   |||||| | || ||||||||| |||||  |||||| |||||| ||| ||||||| |    
T  750600 tcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcg 750699  T
Q  120 tgtctggtgt 129  Q
    |||| |||||    
T  750700 tgtccggtgt 750709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 9800112 - 9800015
Alignment:
Q  26 tctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||||||||| |||||| ||||||||  ||||||||  |||||| | ||||| |||||| |||||  |||||| ||||||||| | ||||| |||||    
T  9800112 tctgataccgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtc 9800015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 14209190 - 14209105
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||||| || ||||| ||||||  |||||||||||||||||| |||||| | ||||||| |||| |||||  |||||| ||||||    
T  14209190 tcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 23870574 - 23870635
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    |||| ||||| |||||||| |||||||||||| |||||| ||||||||||||| || |||||    
T  23870574 taatcacactgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgt 23870635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 27505306 - 27505229
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    |||||| ||||||||||||||||||| |||||| | ||||||  |||| |||||| |||||| | |||| ||||||||    
T  27505306 acgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcggcttgtccgtatccgt 27505229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 29112295 - 29112356
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    |||||||||| |||||||| ||||| ||||||||||||  ||||| |||||||||| |||||    
T  29112295 taattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtccgt 29112356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 34185122 - 34185191
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtca 107  Q
    |||||| ||||||||||||||||||| |||| | | ||||||| |||| |||||| |||||| |||||||    
T  34185122 acgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtca 34185191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 25948881 - 25948965
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||| |||||| | |||||| |||||||||| |||||| | |||||||||||| |||||| || ||| | ||||||| |||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgt 25948965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 16000016 - 16000099
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgt 122  Q
    ||||| ||||||||||| ||||||| |||||| | ||||||| |||| |||||  |||||| ||||||||| || |||| ||||    
T  16000016 cgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 25652050 - 25652121
Alignment:
Q  58 tacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||| |||||||||||||| |||||| |||| | |||| | ||||| ||| ||||||| |||||||||||    
T  25652050 tacactgaattatatcattttctcaaattattatccgtgttggcgtgttagtgtccgtgtcgtgtctggtgt 25652121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 51206353 - 51206412
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    ||||| ||||||||||| ||||||| |||||| | |||||||||||| |||||| |||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 7171552 - 7171471
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||||||||  |||||||| |||||| ||||| |  ||| |||||| | ||||||||||||||| ||||| |||||    
T  7171552 acacttgtaattacaccgaattatatgattttt-caaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccggtgt 7171471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 29508501 - 29508451
Alignment:
Q  41 acatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    |||||||||| | |||||||||| |||||||| |||||||||||| |||||    
T  29508501 acatcgacacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 11313815 - 11313860
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    ||||||||||||||||| | ||||| |||||| |||||||||||||    
T  11313815 taattacactaaattatgtgattttctcaaattattagcagtgtcg 11313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 14829755 - 14829679
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| |||||| ||||||||||||||||  | |||||| | | |||||||||| |||||| |||||| |||||||||    
T  14829755 accgacacgacaccgacacttgtaattaccatgaattatgtga-tttttcaaattattagctgtgtcggcgtgtcagt 14829679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 21256992 - 21257045
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    ||||||||||||||| ||| |||||| | |||||||||||| |||||| |||||    
T  21256992 cgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 47775776 - 47775711
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatc 112  Q
    |||| |||||||||| | |||||||||||||||| | || |||| | |||||||||| ||||||||    
T  47775776 acacatgtaattacattgaattatatcatttttttagattattatccgtgtcgacgtatcagtatc 47775711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 1583244 - 1583300
Alignment:
Q  34 cgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataatta 90  Q
    ||||||||||||||||| | || ||| ||| |||||||| ||||||| |||||||||    
T  1583244 cgatacgacatcgacacatatagttatactgaattatatgatttttttaaataatta 1583300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 3610710 - 3610602
Alignment:
Q  22 cgtgtctgataccgatacg-acatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    |||||| || ||||||||| ||| ||||||| ||||||||||| | |||| | ||||||| |||| |||| | |||| | ||||||||| || |||| ||    
T  3610710 cgtgtccgacaccgatacggacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgt 3610611  T
Q  121 gtctggtgt 129  Q
    ||| |||||    
T  3610610 gtccggtgt 3610602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 7928509 - 7928449
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    ||||| |||||| | |||||||||| |||||| | |||||||||||| |||||| ||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 27277853 - 27277897
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    ||||||||||||||||| | ||||| |||||| ||||||||||||    
T  27277853 taattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 35994744 - 35994827
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||||||||||| |||||| | | |||||||||| |||||| |||||| | ||||| | ||| ||| ||||| |||||    
T  35994744 cgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgt 35994827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 20238 - 20141
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| ||||||  |||||||||||||||||| |||||| | |||||||||||| |||||| |||||| ||||||| | ||||||| ||||| |||||    
T  20238 accgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgt 20141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 16303265 - 16303342
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  |||| |  ||||| ||||||||| |||||    
T  16303265 acgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgt 16303342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 30299007 - 30298927
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatca-ttttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||||| ||||||||||||||||||| |||||| ||| ||||||||||| |||||| |||||| ||||||||| |||||||    
T  30299007 acgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 30298927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 30327875 - 30327795
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatca-ttttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||||| ||||||||||||||||||| |||||| ||| ||||||||||| |||||| |||||| ||||||||| |||||||    
T  30327875 acgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 30327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 30838270 - 30838183
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg 125  Q
    |||||| ||| |||| ||||||||||||||||||| ||||| |||||| ||||||||| ||||||| ||||| ||||||  |||||||    
T  30838270 acgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtccgtgccgtgtctg 30838183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 21945562 - 21945492
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagt 109  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||||| |||||| |||||| | |||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagt 21945492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 23292986 - 23293076
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| ||||||||||||||| ||| |||||| | |||||||||||| |||||| |||||| ||||||| | ||||||| ||||| |||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgt 23293076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 27706185 - 27706267
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||||||||||||||||||| | ||||||| |||| ||||   |||||||||||||||| ||| ||| |||||||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgt 27706267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 35157986 - 35158075
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||| |||||||| ||||||||||||||||| | |||||| ||||| |||||  | |||| ||||||||| ||||||||||||| |||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgt 35158075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 19482745 - 19482637
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    |||||||  ||||||| |||||| | ||||||||||||||||  |||||| | || ||||||||| |||||  |||||| ||||||||| || |||| ||    
T  19482745 tcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgt 19482646  T
Q  121 gtctggtgt 129  Q
    |||||||||    
T  19482645 gtctggtgt 19482637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 37203315 - 37203264
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattagccgtgtc 37203264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 20633535 - 20633454
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||||||||| | |||||| |   |||||||||| |||||| |||||||||||||||| ||||| | |||||||||||    
T  20633535 cgacacttgtaattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgt 20633454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 2361975 - 2362035
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    ||||| |||||||| ||||||||||||||||| | |||||||||||| |||||| ||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcg 2362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 40742667 - 40742599
Alignment:
Q  22 cgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataatta 90  Q
    ||||||||| ||||| ||||||||||||| | ||||||||||| ||||||| ||||| |||||| ||||    
T  40742667 cgtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttctcaaattatta 40742599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 12708207 - 12708165
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcatttttt 80  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  12708207 acgacatcgacacttgtaattacactgaattatttcatttttt 12708165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 6485617 - 6485662
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataatta 90  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||    
T  6485617 cgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 11651142 - 11651219
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtct 124  Q
    ||||||||| || |||| |||||| | ||||||| |||| |||||| |||||||||||||||| ||||| | ||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtct 11651219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 24613683 - 24613768
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    |||||||||| ||||| | |||| ||||||||||| ||||| | |||||| | ||||| |||||| |||||  |||||||||||||    
T  24613683 tcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 38847019 - 38847072
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    |||||||||||||||||| ||| |||| |||||||||||| |||||| ||||||    
T  38847019 gacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcg 38847072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 29205497 - 29205445
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgt 97  Q
    ||||||||||||||||||| |||||| | |||||||||||| |||||| ||||    
T  29205497 cgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgt 29205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 51701309 - 51701241
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgtt 118  Q
    ||||||||||||||||| |||||| | |||||||||||| |||||| |||||  |||||| |||||||||||    
T  51701309 acacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc--cgtgtc-gtatccgtgtt 51701241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 47264044 - 47263977
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtca 107  Q
    |||||||||| ||||||||||||  |||||| | |||||| ||||| ||||||  |||||||||||||    
T  47264044 gacatcgacatttgtaattacacagaattatgtgatttttacaaattattagctatgtcgacgtgtca 47263977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 3947760 - 3947826
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    |||| ||||||  |||||||||||||||||| ||||||   |||||||||||| |||||| ||||||    
T  3947760 ccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcg 3947826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 4383444 - 4383351
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    |||||| ||| ||||| ||||||  |||| ||||||||||||| |||||| | | |||||||||| |||||  || ||||||||||||| |||||    
T  4383444 tcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtga-tttttcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 11596351 - 11596405
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagc 92  Q
    |||||| | ||||||||||||||||| |||||| | |||||||||||| ||||||    
T  11596351 acgacacctacacttgtaattacactgaattatgtgattttttcaaattattagc 11596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 13134510 - 13134444
Alignment:
Q  38 acgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtg 104  Q
    ||||||||||||| | ||||||||||||||||| | ||||| | |||| || |||||||||| ||||    
T  13134510 acgacatcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggcgtg 13134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 28964255 - 28964301
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagc 92  Q
    |||||||||||||||||| |||||| | |||||||||||| ||||||    
T  28964255 gacacttgtaattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 31800484 - 31800538
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcg 99  Q
    ||||||||||||||||| |||||||| | ||||||| |||| |||||| ||||||    
T  31800484 cgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcg 31800538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 12895110 - 12895183
Alignment:
Q  33 ccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    |||| |||||| ||||||||||||||||  | |||||| | |||||||||||| |||||| || ||| ||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc 12895183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 49431085 - 49431016
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcatttttt-caaataattagcagtgtcgacgtgtca 107  Q
    ||||| |||||||| |||||||||| |||||| | ||||||| ||||| |||||| |||||| |||||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtca 49431016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 5832716 - 5832760
Alignment:
Q  61 actaaattatatcattttttcaaataattagcagtgtcgacgtgt 105  Q
    ||||||| |||| ||||| |||||| |||||||||||||||||||    
T  5832716 actaaatcatatgattttctcaaattattagcagtgtcgacgtgt 5832760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 12895274 - 12895342
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtca 107  Q
    ||||| |||||||| ||||||||| ||||||| | |||||||||||| ||||   |||||| |||||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtca 12895342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 34306804 - 34306887
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||| |||||||||||||||||||| ||||| | | |||||||||| |||||  |||||| ||| ||||| || || |||||||    
T  34306804 cgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcggcgtatcagtgtctgtattgtgtc 34306887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 34515892 - 34515960
Alignment:
Q  57 ttacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg 125  Q
    ||||||| |||||| ||||||| |  ||| |||| | |||||||||||||||| | |||||||||||||    
T  34515892 ttacactgaattatgtcattttcttgaattattatccgtgtcgacgtgtcagtgttcgtgttgtgtctg 34515960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 54580023 - 54580075
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    ||||| |||||||| |||||||||| |||||| | |||||||||||| |||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 56257977 - 56257933
Alignment:
Q  54 taattacactaaattatatcattttttcaaataattagcagtgtc 98  Q
    |||||||||| |||||||| ||||| |||||| ||||||||||||    
T  56257977 taattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 241671 - 241563
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgt 120  Q
    ||||||| || ||| | |||||| |||||||  ||||||||||||||||| | |||||| ||||| |||||| |||||| ||||||||| ||||||| ||    
T  241671 tcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 241572  T
Q  121 gtctggtgt 129  Q
    ||| |||||    
T  241571 gtccggtgt 241563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 51862 - 51792
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    ||||||||||||||||| |||||| | |||||||||||| |||||| |||||| ||||||||| |||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt 51792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 462 - 539
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtg 116  Q
    ||||| ||||||||||||||||||| |||| | | |||||||||||| ||||||||||||| ||| ||||| ||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtg 539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 7040 - 7108
Alignment:
Q  47 acacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    ||||||||||||| |||||||||| | |||||||||||| |||||| |||||||||| ||||| |||||    
T  7040 acacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtccgt 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 178825 - 178909
Alignment:
Q  46 gacacttgtaattacactaaattat-atcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||||||||||||||| |||||| || |||||||||||| |||||  |||||| ||||||||| ||||||| ||||| |||||    
T  178825 gacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgt 178909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 192256 - 192335
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctg 125  Q
    |||||||||||||||||  |||||| | ||||| |||||| |||| | |||||| ||||||||| ||||| | |||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtctg 192335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 263354 - 263450
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgt 117  Q
    |||||||||| ||||| ||||||  ||||||| |||||||||| |||||| |  |||| |||||| ||||||||||| ||| ||||||| |||||||    
T  263354 tcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgt 263450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 92859 - 92790
Alignment:
Q  46 gacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgt 115  Q
    |||||||||||||||||| |||||| | ||||| |||||| |||||| |||||| ||||||||| |||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 83236 - 83173
Alignment:
Q  22 cgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcattttttcaaat 85  Q
    |||||| |||| | |||||||| ||||| ||||||||||||| |||||| ||||||||| ||||    
T  83236 cgtgtccgatatcaatacgacaccgacatttgtaattacactgaattatgtcatttttttaaat 83173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 46741 - 46657
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtc 123  Q
    ||||| ||||| ||||||||||||| |||||| | |||||||||||| |||| | |||||| ||||||| | ||||||| |||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtc 46657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 3005 - 2946
Alignment:
Q  21 tcgtgtctgataccgatacgacatcgacacttgtaattacactaaattatatcatttttt 80  Q
    |||||||||||||||| ||||||  || |||||||||||||||||||||| | |||||||    
T  3005 tcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgatttttt 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 17750 - 17801
Alignment:
Q  40 gacatcgacacttgtaattacactaaattatatcattttttcaaataattag 91  Q
    |||| |||||||||||||||||||||||||| | |||||||||||| |||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 17801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 130535 - 130451
Alignment:
Q  45 cgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||||||||||| |||||| | |||||||||||  |||| | |||||| | ||||| | ||||||| ||||| |||||    
T  130535 cgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgt 130451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 33375 - 33430
Alignment:
Q  51 ttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||||||||||| |||||| | |||||||||||| |||||| |||||| ||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 70337 - 70270
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    ||||| |||||||| |||||||||| |||||| | |||||||||||| |||| | |||||||| ||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtc 70270  T

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Target: scaffold0361 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 14580 - 14522
Alignment:
Q  48 cacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtc 106  Q
    |||||||||||||||| |||||| | |||||||||||| |||||  |||||| ||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 14522  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 3326 - 3285
Alignment:
Q  88 ttagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    |||||| ||||||||||||||||||||||| ||||| |||||    
T  3326 ttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgt 3285  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 8068 - 7996
Alignment:
Q  39 cgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatc 112  Q
    ||||| |||||||| ||||||||||  ||||||| |||||||||||| |||||  |||||| |||||| |||||    
T  8068 cgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtctgtatc 7996  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 56988 - 56891
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||| ||||||  ||||||| | |||||||| |||||||||||||| |||||| || | |  | || |||||||||| | |||||||||||| ||||    
T  56988 accgacacgacactgacacttatgattacactgaattatatcattttctcaaattataatctttatcaacgtgtcagtgtgcgtgttgtgtctagtgt 56891  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 68235 - 68332
Alignment:
Q  32 accgatacgacatcgacacttgtaattacactaaattatatcattttttcaaataattagcagtgtcgacgtgtcagtatccgtgttgtgtctggtgt 129  Q
    ||||||||||||  ||||| | |||||| |||||||||||| ||||| |||||| |||| | |||   | |||||||||| | |||||||| ||||||    
T  68235 accgatacgacactgacacctataattatactaaattatatgattttctcaaattattaacggtgctaatgtgtcagtattcatgttgtgtttggtgt 68332  T

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