View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3918_high_222 (Length: 219)

Name: NF3918_high_222
Description: NF3918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3918_high_222
NF3918_high_222
[»] chr5 (11 HSPs)
chr5 (3-67)||(10223298-10223362)
chr5 (101-187)||(10223442-10223529)
chr5 (127-205)||(5361503-5361582)
chr5 (127-211)||(6642070-6642155)
chr5 (127-211)||(8942882-8942967)
chr5 (127-211)||(42092228-42092313)
chr5 (127-205)||(28574682-28574761)
chr5 (131-204)||(8943218-8943292)
chr5 (126-211)||(29440293-29440379)
chr5 (127-211)||(2802892-2802977)
chr5 (127-211)||(21250274-21250359)
[»] chr8 (17 HSPs)
chr8 (127-211)||(29276637-29276722)
chr8 (127-212)||(29457135-29457221)
chr8 (127-211)||(6121524-6121609)
chr8 (126-211)||(9117518-9117604)
chr8 (127-205)||(9779146-9779225)
chr8 (127-212)||(31826850-31826936)
chr8 (127-211)||(23404083-23404168)
chr8 (127-210)||(27702602-27702686)
chr8 (127-205)||(31827161-31827240)
chr8 (127-212)||(35435584-35435670)
chr8 (127-219)||(15891648-15891741)
chr8 (127-219)||(15891778-15891871)
chr8 (127-211)||(22444621-22444706)
chr8 (127-211)||(44728126-44728211)
chr8 (127-211)||(44728390-44728475)
chr8 (127-211)||(15315117-15315201)
chr8 (127-211)||(15495486-15495570)
[»] chr2 (10 HSPs)
chr2 (127-205)||(7438451-7438530)
chr2 (127-211)||(5482889-5482974)
chr2 (127-219)||(7881634-7881727)
chr2 (127-211)||(11974166-11974251)
chr2 (127-211)||(29683594-29683679)
chr2 (127-211)||(33616014-33616099)
chr2 (127-211)||(45638077-45638162)
chr2 (127-212)||(34334547-34334633)
chr2 (127-211)||(33615756-33615841)
chr2 (139-211)||(40343703-40343775)
[»] chr1 (14 HSPs)
chr1 (127-219)||(4965053-4965146)
chr1 (126-219)||(5739484-5739578)
chr1 (127-211)||(29987221-29987306)
chr1 (127-205)||(1102618-1102697)
chr1 (127-211)||(20491720-20491805)
chr1 (127-211)||(39834008-39834093)
chr1 (127-205)||(20492020-20492099)
chr1 (127-202)||(41810951-41811026)
chr1 (127-212)||(4765100-4765186)
chr1 (126-215)||(32712181-32712271)
chr1 (127-219)||(41810745-41810838)
chr1 (127-219)||(45721147-45721240)
chr1 (127-211)||(49113176-49113261)
chr1 (128-211)||(18030544-18030628)
[»] chr7 (11 HSPs)
chr7 (127-211)||(48840026-48840110)
chr7 (126-205)||(18808123-18808203)
chr7 (127-205)||(37042994-37043073)
chr7 (127-211)||(18942313-18942398)
chr7 (127-211)||(42430633-42430718)
chr7 (127-211)||(42759217-42759302)
chr7 (127-211)||(3173240-3173325)
chr7 (127-211)||(45443390-45443475)
chr7 (127-211)||(47193512-47193597)
chr7 (127-211)||(48840252-48840337)
chr7 (127-178)||(47332353-47332405)
[»] chr3 (10 HSPs)
chr3 (127-212)||(33623357-33623443)
chr3 (127-211)||(13712307-13712392)
chr3 (127-211)||(17579762-17579847)
chr3 (127-205)||(10820298-10820377)
chr3 (127-201)||(11218283-11218358)
chr3 (129-211)||(48517931-48518014)
chr3 (127-211)||(10820238-10820323)
chr3 (127-211)||(17580068-17580153)
chr3 (128-211)||(8112812-8112896)
chr3 (127-205)||(54924091-54924168)
[»] chr4 (18 HSPs)
chr4 (131-211)||(18598212-18598293)
chr4 (127-211)||(50523077-50523162)
chr4 (127-206)||(21956040-21956120)
chr4 (127-205)||(40998185-40998263)
chr4 (127-212)||(40998429-40998515)
chr4 (127-211)||(18598537-18598622)
chr4 (127-211)||(25154799-25154884)
chr4 (127-211)||(29031282-29031367)
chr4 (127-211)||(29043401-29043486)
chr4 (127-205)||(13846613-13846692)
chr4 (127-205)||(34979497-34979576)
chr4 (127-205)||(40998125-40998204)
chr4 (127-212)||(21956368-21956454)
chr4 (127-205)||(25363566-25363647)
chr4 (127-211)||(14966429-14966514)
chr4 (127-211)||(15631340-15631425)
chr4 (127-211)||(41898136-41898220)
chr4 (126-205)||(6112013-6112093)
[»] scaffold0062 (1 HSPs)
scaffold0062 (127-211)||(11733-11818)
[»] scaffold0051 (1 HSPs)
scaffold0051 (127-205)||(60491-60570)
[»] chr6 (2 HSPs)
chr6 (127-205)||(24012518-24012597)
chr6 (127-214)||(33040998-33041086)
[»] scaffold0182 (1 HSPs)
scaffold0182 (126-205)||(22449-22529)


Alignment Details
Target: chr5 (Bit Score: 61; Significance: 2e-26; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 10223298 - 10223362
Alignment:
Q  3 aacattttagaagtgttaggcatcaaatttgactttagaaatttaagattgaaattctgagtaag 67  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10223298 aacattttagaagtgctaggcatcaaatttgactttagaaatttaagattgaaattctgagtaag 10223362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 10223442 - 10223529
Alignment:
Q  101 aaattacgagtttgttttggatagattttaagtttcatgtttgttttagataggtgttttaa-gttcgaaggtttcagacagattttt 187  Q
    ||||| |||||||||||  |||| ||||||||||||||||||||||||||||| || |||||  |||||| |||||||| ||||||||    
T  10223442 aaatttcgagtttgtttcagataaattttaagtttcatgtttgttttagatagatgctttaattttcgaaagtttcagatagattttt 10223529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 5361582 - 5361503
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    |||||||| ||||||||||| |||||| |  |||||||| | ||||||||||| ||||| ||||||||||||||||||||    
T  5361582 tttaagttgcatgtttgtttcagatagatcatttaagtttctaaggtttcagatagattctttaaatttcgagtttgttt 5361503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 6642155 - 6642070
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||| || |||||||||||||||||  |||||| ||| ||||||||||| || |  ||||| |||||||||||||| |||||    
T  6642155 tttaagttccacgtttgttttagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggata 6642070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 8942882 - 8942967
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| | ||||||  |||||| ||| ||||||||| | || | |||||| |||||||||||||| |||||    
T  8942882 tttaagtttcatgtttgtttcatataggtcctttaagtttctaaggtttcatataggtcttttaagtttcgagtttgtttcggata 8942967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 42092313 - 42092228
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||||||||||||||||||| |  |||||| ||| ||||||||||| || | |||||| |||  ||||||||| |||||    
T  42092313 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggtcttttaagtttgaagtttgtttcggata 42092228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 28574761 - 28574682
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    |||||||||||| ||||||| |||||| | ||||||| ||| ||||||||||| || |  ||||| ||||||||||||||    
T  28574761 tttaagtttcatatttgtttcagatagatcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttt 28574682  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 8943292 - 8943218
Alignment:
Q  131 agtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgtt 204  Q
    |||||||||||||||| |||||| |  |||||||| | ||||||||||| || || ||||| |||||||||||||    
T  8943292 agtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgtt 8943218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 29440379 - 29440293
Alignment:
Q  126 ttttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||||| |||||||||||||| |  |||||| ||  ||||||||||| |  |||||||| ||| |||||||||| |||||    
T  29440379 ttttaagtttcatatttgttttagatagatcctttaagtttttaaggtttcagatatgttttttaagtttggagtttgtttcggata 29440293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 2802892 - 2802977
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| |||||| | ||||||| ||| ||||||| ||| || |  ||||| ||| |||||||||| |||||    
T  2802892 tttaagtttcatgtttgtttcagatagatcttttaagtttctaaggttttagataggtcctttaagtttggagtttgtttcggata 2802977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 21250274 - 21250359
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| ||||||||  || ||| ||| ||||||||||| ||||  ||||  |||||||||||||| |||||    
T  21250274 tttaagtttcaggtttgtttcagataggtccttaaagtttctaaggtttcagatagatcctttatgtttcgagtttgtttcggata 21250359  T

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Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 29276637 - 29276722
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| ||||||||  |||||||| | ||||||||||| || || ||||| ||||||||||||||||||||    
T  29276637 tttaagtttcatgtttgtttcagataggtcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgttttggata 29276722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 29457135 - 29457221
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggatat 212  Q
    |||||||||||||||||||| |||||||| ||||||| ||| ||| ||||||| || || ||||| |||||||||||||| ||||||    
T  29457135 tttaagtttcatgtttgtttcagataggtcttttaagtttctaagatttcagataggttctttaagtttcgagtttgtttcggatat 29457221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 6121524 - 6121609
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||||||||||||||||||| |  |||||| ||| ||||||||||| || || ||||| |||||||||||||| |||||    
T  6121524 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcggata 6121609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 9117518 - 9117604
Alignment:
Q  126 ttttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||||||||||||| |||||| |  |||||| ||| ||||||||||| || |  ||||| ||||||||||||||||||||    
T  9117518 ttttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttttggata 9117604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 9779225 - 9779146
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    |||||||||||||||||||||||||||||  |||||| ||  ||||||||||| || |  ||||| ||||||||||||||    
T  9779225 tttaagtttcatgtttgttttagataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgttt 9779146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 31826850 - 31826936
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggatat 212  Q
    ||||||||||| |||| ||||||||||||  |||||| ||| ||||||||||| || |  ||||| |||||||||||||| ||||||    
T  31826850 tttaagtttcacgtttattttagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatat 31826936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 23404168 - 23404083
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||| | |||||| |  |||||||| | ||||||||||| |  || |||||||||||||||||||| |||||    
T  23404168 tttaagtttcatgtttgtctcagatagatcctttaagttactaaggtttcagatatgttctttaaatttcgagtttgtttcggata 23404083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 27702686 - 27702602
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggat 210  Q
    |||||||||||||||||||| |||||| |  |||||| ||| ||||||||||| || |  ||||| |||||||||||||| ||||    
T  27702686 tttaagtttcatgtttgtttcagatagctcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggat 27702602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 31827240 - 31827161
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    |||||||||||||||||||| |||||| | ||||||| ||| ||||||||||| || |  ||||| ||| ||||||||||    
T  31827240 tttaagtttcatgtttgtttcagatagattttttaagtttctaaggtttcagataggtcctttaagttttgagtttgttt 31827161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 35435670 - 35435584
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggatat 212  Q
    |||||||||||||||||||| |||||| |  |||||| ||| ||||||| ||| || |  ||||| |||||||||||||| ||||||    
T  35435670 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcggatat 35435584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 15891648 - 15891741
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggatatatcattt 219  Q
    ||||||||| | |||||||| ||||||||  |||||||| | ||||||| ||| ||||  ||||| ||||||||||||||  ||||| ||||||    
T  15891648 tttaagtttgaagtttgtttcagataggtcctttaagtttctaaggttttagatagatcctttaagtttcgagtttgtttcagatatgtcattt 15891741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 15891871 - 15891778
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggatatatcattt 219  Q
    ||||||||| | |||||||| ||||||||  |||||||| | ||||||| ||| ||||  ||||| ||||||||||||||  ||||| ||||||    
T  15891871 tttaagtttgaagtttgtttcagataggtcctttaagtttctaaggttttagatagatcctttaagtttcgagtttgtttcagatatgtcattt 15891778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 22444621 - 22444706
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| ||||||||  |||||||  |||||||| | || |||||||| || || ||||| |||||||||||||| |||||    
T  22444621 tttaagtttcacgtttgtttcggataggtcctttaagtttctaaagtttcagataggttctttaagtttcgagtttgtttcggata 22444706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 44728126 - 44728211
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| |||||| |  |||||| ||| |||||||||||||| |  ||||| |||| ||||| ||| |||||    
T  44728126 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagacaggtcctttaagtttcaagtttatttcggata 44728211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 44728475 - 44728390
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcg-aaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| ||| | ||  ||||||||   ||||||||||| ||||| ||||| |||||||||||||| |||||    
T  44728475 tttaagtttcacgtttgtttcagacaagtcctttaagtttttaaggtttcagatagattctttaagtttcgagtttgtttcggata 44728390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 15315117 - 15315201
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| ||||||||  ||||| ||| ||||||||||| |  |  ||||| ||||| |||||||| |||||    
T  15315117 tttaagtttcacgtttgtttcagataggtcctttaaattctaaggtttcagataagtcctttaagtttcgtgtttgtttcggata 15315201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 15495486 - 15495570
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| ||||||||  ||||| ||| ||||||||||| |  |  ||||| ||||| |||||||| |||||    
T  15495486 tttaagtttcacgtttgtttcagataggtcctttaaattctaaggtttcagataagtcctttaagtttcgtgtttgtttcggata 15495570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 7438530 - 7438451
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||| || |  ||||||||||||||||||||    
T  7438530 tttaagtttcacgtttgttttagataggtcttttaagtttctaaggtttcagataggtcctttaaatttcgagtttgttt 7438451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 5482889 - 5482974
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| |||||| |  |||||||| | ||||||||||| || | |||||| |||||||||||||| |||||    
T  5482889 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtgttttaagtttcgagtttgtttcggata 5482974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 7881634 - 7881727
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggatatatcattt 219  Q
    ||||||||||| |||||||| | |||||  |||||| || | ||||||||||| ||||  ||||| |||||||||||||||| |||| ||||||    
T  7881634 tttaagtttcacgtttgtttcaaataggccttttaaatttctaaggtttcagatagatcctttaagtttcgagtttgttttgaatatgtcattt 7881727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 11974251 - 11974166
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcg-aaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| ||||| || |||||||||   ||||||||||| | ||  |||||||||||||||||||| |||||    
T  11974251 tttaagtttcacgtttgtttcagatatgtcttttaagtttataaggtttcagataaatcctttaaatttcgagtttgtttcggata 11974166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 29683594 - 29683679
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||| ||||| |||||||| ||||||||  |||||||| | ||||||||||| || |  ||||| ||||||||||||||||||||    
T  29683594 tttaaatttcacgtttgtttcagataggttctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttttggata 29683679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 33616099 - 33616014
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||||||||||||||||||| |  |||||| ||| ||||||||||| || |  ||||| ||| |||||||||| |||||    
T  33616099 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggtactttaagttttgagtttgtttcggata 33616014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 45638077 - 45638162
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| ||||||||  |||||| ||| || |||||||| || |  ||||| |||||||||||||| |||||    
T  45638077 tttaagtttcatgtttgtttcagataggtcctttaagtttctaacgtttcagataggtcctttaagtttcgagtttgtttcggata 45638162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 34334547 - 34334633
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggatat 212  Q
    |||||||||||||||||||| |||||| |  |||||| ||  ||||||||||| || |  ||||| |||||||||||||| ||||||    
T  34334547 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcatttaagtttcgagtttgtttgggatat 34334633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 33615756 - 33615841
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||| ||| ||||| ||  |||||||| | ||||||||| | ||||  |||||||||||||||||||| |||||    
T  33615756 tttaagtttcacgtttatttcagataagttctttaagtttctaaggtttcatatagatcctttaaatttcgagtttgtttcggata 33615841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 40343775 - 40343703
Alignment:
Q  139 gtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||| |||||| ||| ||||||||||| ||  | ||||| |||||||||||||| |||||    
T  40343775 gtttgttttagataggtgctttaagtttctaaggtttcagatag-gtctttaagtttcgagtttgtttcggata 40343703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 4965146 - 4965053
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggatatatcattt 219  Q
    ||||||||||||||||||||||||||| |  |||||| ||| ||||||||||| || | |||||||||| ||||||||||  |||| |||||||    
T  4965146 tttaagtttcatgtttgttttagatagatcatttaagtttctaaggtttcagataggtcttttaaattttgagtttgtttcagatagatcattt 4965053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 5739578 - 5739484
Alignment:
Q  126 ttttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggatatatcattt 219  Q
    |||||||||||| |||||||| |||||| | ||||||||| | ||||||||||| || || ||||| ||||||||||||||  |||| |||||||    
T  5739578 ttttaagtttcacgtttgtttcagatagatcttttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcagatagatcattt 5739484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 29987221 - 29987306
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcg-aaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| ||||||||  ||||||||   ||||||||||| ||||| ||||| |||||||||||||| |||||    
T  29987221 tttaagtttcacgtttgtttcagataggtcctttaagtttttaaggtttcagatagattctttaagtttcgagtttgtttcggata 29987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 1102618 - 1102697
Alignment:
Q  127 tttaagtttcatgtttgttttagataggt-gttttaagttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||| |||||||||||||||||||||||  ||| || ||| |||||||||||||  || ||||| ||||||||||||||    
T  1102618 tttaaatttcatgtttgttttagataggtcctttaaatttctaaggtttcagacatgttctttaagtttcgagtttgttt 1102697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 20491720 - 20491805
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||||||||||||| ||||| | ||||||| ||  ||||||||||| || |  ||||| |||||||||||||| |||||    
T  20491720 tttaagtttcatgtttgttttggatagatcttttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggata 20491805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 39834008 - 39834093
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| ||||||||  |||||| ||| ||||||||||| |  |  ||||| ||||||||||||||||||||    
T  39834008 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgttttggata 39834093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 20492099 - 20492020
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    |||||||||||||||||||| |||||| |  |||||| ||| ||||||||||| || |  ||||| ||||||||||||||    
T  20492099 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttgttt 20492020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 41811026 - 41810951
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcgaaggtttcagacagattttttaaatttcgagtttg 202  Q
    |||||||||||||||||||| |||||| | ||| |  ||| ||||||||||| || |  |||||||||||||||||    
T  41811026 tttaagtttcatgtttgtttcagatagatctttaagtttctaaggtttcagataggtcctttaaatttcgagtttg 41810951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 4765186 - 4765100
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggatat 212  Q
    ||||||||||| |||||||| ||||||||  |||||| ||| ||||||| | | || || ||||| |||||||||||||| ||||||    
T  4765186 tttaagtttcacgtttgtttcagataggttctttaagtttctaaggttttaaataggttctttaagtttcgagtttgtttcggatat 4765100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 32712181 - 32712271
Alignment:
Q  126 ttttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggatatatc 215  Q
    ||||||||||||||||||||| |||||| |  |||||| ||| ||| ||||||| |  |  ||||| |||||||||||||| |||||||||    
T  32712181 ttttaagtttcatgtttgtttcagatagatcctttaagtttctaagatttcagataagtcctttaagtttcgagtttgtttcggatatatc 32712271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 41810745 - 41810838
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggatatatcattt 219  Q
    ||||||||||| |||||||| ||||||||  |||||| ||| ||||||||||| || |  ||||| |||  ||||||||| |||||| ||||||    
T  41810745 tttaagtttcacgtttgtttcagataggttatttaagtttctaaggtttcagataggtcctttaagttttaagtttgtttcggatatgtcattt 41810838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 45721147 - 45721240
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggatatatcattt 219  Q
    |||||||||||||||||||| || ||| | ||||||| ||| ||||||||||| |  |  ||||| ||||||| |||||| ||||| |||||||    
T  45721147 tttaagtttcatgtttgtttcaggtagatcttttaagtttctaaggtttcagatatgtcctttaagtttcgagcttgtttcggatagatcattt 45721240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 49113261 - 49113176
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||| ||| |||||| |  |||||||| | |||||||||||||  |  ||||| |||||||||||||| |||||    
T  49113261 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagacatgtcctttaagtttcgagtttgtttcggata 49113176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 18030628 - 18030544
Alignment:
Q  128 ttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||| |||||| ||||||| ||||| ||  ||||| || | ||||||||||| | ||| ||||| ||||||||||||||||||||    
T  18030628 ttaaatttcatatttgtttcagataagtcctttaaatttctaaggtttcagatatattatttaagtttcgagtttgttttggata 18030544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 48840026 - 48840110
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| ||||||||  ||||| ||| ||||||||||| || || ||||||||| |||||||||| |||||    
T  48840026 tttaagtttcacgtttgtttcagataggtcctttaaattctaaggtttcagataggttctttaaattttgagtttgtttcggata 48840110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 18808203 - 18808123
Alignment:
Q  126 ttttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    |||||||||||| |||||||||||||||||  |||| | ||| ||||||| ||| ||||  ||||||||||||||||||||    
T  18808203 ttttaagtttcacgtttgttttagataggtcctttatgtttctaaggttttagatagatcctttaaatttcgagtttgttt 18808123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 37042994 - 37043073
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||||||||||||||||||  ||||| || |||||| ||| ||||||||||| ||||  ||||| ||||||||||||||    
T  37042994 tttaagtttcatgtttgtttaggatagatgctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgttt 37043073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 18942313 - 18942398
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| |||||| |  |||||| |||  |||||||||| || |  |||||||||||||||||||| |||||    
T  18942313 tttaagtttcatgtttgtttcagatagatcctttaagtttctgaggtttcagataggtcctttaaatttcgagtttgtttcggata 18942398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 42430718 - 42430633
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| |||||| |  |||||| ||| ||||||||||| || |  ||||| |||||||||||||| |||||    
T  42430718 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggata 42430633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 42759302 - 42759217
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||| ||| | |||||| ||||||||| | ||||||||||| || || ||||| |||||||||||||| |||||    
T  42759302 tttaagtttcacgtttatttcatataggtcttttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcggata 42759217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 3173240 - 3173325
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| |||||| |  |||||| ||  ||||||||||| || |  ||||| |||||||||||||| |||||    
T  3173240 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggata 3173325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 45443475 - 45443390
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcga-aggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||||||||||||  ||||||||    |||||||||| || |  ||||| ||||||||||||||| ||||    
T  45443475 tttaagtttcacgtttgttttagataggtcctttaagtttttgaggtttcagataggtcctttaagtttcgagtttgttttagata 45443390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 47193597 - 47193512
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||| |||||||||||| | ||||||| ||| ||||||| ||| || |  ||||| |||||||||| ||| |||||    
T  47193597 tttaagtttcatgtatgttttagatagatcttttaagtttctaaggttttagataggtcctttaagtttcgagtttatttcggata 47193512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 48840337 - 48840252
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| |||||| |  |||||| ||| ||||||||| | || |  ||||| |||||||||||||| |||||    
T  48840337 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcggata 48840252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 47332353 - 47332405
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcaga 178  Q
    ||||||||||||||||||||||||||| |  |||||| ||| |||||||||||    
T  47332353 tttaagtttcatgtttgttttagatagatcatttaagtttctaaggtttcaga 47332405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 33623443 - 33623357
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggatat 212  Q
    ||||||||||| || ||||||||||||||  |||||||| | ||||||||||| ||||  ||||| |||||||||||||| ||||||    
T  33623443 tttaagtttcacgtctgttttagataggtcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcggatat 33623357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 13712392 - 13712307
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| ||||||||  |||||||| | ||||||||||| || || ||||| |||||||||||||| |||||    
T  13712392 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcggata 13712307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 17579762 - 17579847
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| ||||||||  |||||| ||| ||||||||||| || |  ||||| |||||||||||||| |||||    
T  17579762 tttaagtttcatgtttgtttcagataggttctttaagtttctaaggtttcagataggtgctttaagtttcgagtttgtttcggata 17579847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 10820298 - 10820377
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||||||||  ||||||||  ||||||| ||||||||| | ||||||||||| || || ||||| ||||||||||||||    
T  10820298 tttaagtttcgagtttgtttcggataggtcttttaagtttctaaggtttcagataggttctttaagtttcgagtttgttt 10820377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 11218358 - 11218283
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagttt 201  Q
    ||||||||||| |||||||| ||||| ||  |||||||| | ||||||||||| ||||  ||||||||||||||||    
T  11218358 tttaagtttcaagtttgtttcagataagtcctttaagtttctaaggtttcagatagatcctttaaatttcgagttt 11218283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 48517931 - 48518014
Alignment:
Q  129 taagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||||||||||||||||| |  |||||| ||| ||||||| ||| || |  ||||| |||||||||||||| |||||    
T  48517931 taagtttcatgtttgttttagatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcggata 48518014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 10820238 - 10820323
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| |||||| |  |||||||| | ||||||||||| |  || ||||| |||||||||||||| |||||    
T  10820238 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgttctttaagtttcgagtttgtttcggata 10820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 17580153 - 17580068
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||| ||| ||||||||||||||||| | ||||||| ||| ||||||| ||| |  |||||||| |||||||||| ||| |||||    
T  17580153 tttaaattttatgtttgttttagatagattttttaagtttctaaggttttagataagttttttaagtttcgagtttatttcggata 17580068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 8112896 - 8112812
Alignment:
Q  128 ttaagtttcatgtttgttttagataggt-gttttaagttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||| |||||||||||||||||  ||| || ||| ||||||||||| |  |  || || ||||||||||||||||||||    
T  8112896 ttaagtttcacgtttgttttagataggtcctttaaatttctaaggtttcagataagtccttaaagtttcgagtttgttttggata 8112812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 54924168 - 54924091
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||||||| ||||||||||||||||  |  |||||||| | ||||||||||| || || ||||| ||||||||||||||    
T  54924168 tttaagttttatgtttgttttagatacct--tttaagtttctaaggtttcagataggttctttaagtttcgagtttgttt 54924091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 18598212 - 18598293
Alignment:
Q  131 agtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||| |||||||| ||||||||  |||||||| | ||||||||||| ||||  |||||||||||||||||||| |||||    
T  18598212 agtttcaagtttgtttcagataggtcctttaagtttctaaggtttcagatagatcatttaaatttcgagtttgtttcggata 18598293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 50523077 - 50523162
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||||||||||||  |||||| ||| | |||||| || ||||| ||||| |||||||||||||| |||||    
T  50523077 tttaagtttcacgtttgttttagataggtcatttaagtttctatggtttcggatagattctttaagtttcgagtttgtttcggata 50523162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 21956040 - 21956120
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgtttt 206  Q
    |||||||||||||||||||| |||||| |  |||||| ||| ||||||||||| || |  |||||||||||||||||||||    
T  21956040 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttt 21956120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 40998185 - 40998263
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||||||||  |||||||| ||||||||  ||||||||| ||||||||||| || |  ||||| ||||||||||||||    
T  40998185 tttaagtttcgagtttgtttcagataggtcctttaagttctaaggtttcagataggtcctttaagtttcgagtttgttt 40998263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 40998515 - 40998429
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcg-aaggtttcagacagattttttaaatttcgagtttgttttggatat 212  Q
    ||||||||||| |||||||||||||| ||  ||||||||   ||||||||||| || || ||||| |||||||||||||| ||||||    
T  40998515 tttaagtttcacgtttgttttagatatgttctttaagtttataaggtttcagataggttctttaagtttcgagtttgtttcggatat 40998429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 18598622 - 18598537
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||||||||||||  | |||| ||| ||||||||||| || |  ||||| |||||||||||||| |||||    
T  18598622 tttaagtttcaagtttgttttagataggtcctctaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggata 18598537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 25154884 - 25154799
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| |||||| | ||||||| ||| |||||||||||||| |  |||||  || |||||||||| |||||    
T  25154884 tttaagtttcatgtttgtttcagatagatcttttaagtttctaaggtttcagacaggtcctttaagattagagtttgtttcggata 25154799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 29031282 - 29031367
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||||||||| || ||||||| ||| ||| ||||||| || |  ||||| |||||||||||||| |||||    
T  29031282 tttaagtttcacgtttgttttagataagtcttttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttcggata 29031367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 29043401 - 29043486
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||||||||| || ||||||| ||| ||| ||||||| || |  ||||| |||||||||||||| |||||    
T  29043401 tttaagtttcacgtttgttttagataagtcttttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttcggata 29043486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 13846613 - 13846692
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    |||||| ||||||||||||| |||||| |  |||||||| | ||||||||||| || | |||||| ||||||||||||||    
T  13846613 tttaaggttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgttt 13846692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 34979497 - 34979576
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||||||||| |||||||| ||||||||  |||||| ||| ||||||||||| || |  ||||| ||||||||||||||    
T  34979497 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttt 34979576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 40998125 - 40998204
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||| ||||||||||||||||||||| | ||||||||| | || |||||||| || |  ||||| ||||||||||||||    
T  40998125 tttaaatttcatgtttgttttagatagatcttttaagttactaaagtttcagataggtcctttaagtttcgagtttgttt 40998204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 21956454 - 21956368
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggatat 212  Q
    ||||||||||||||||||||  |||||||  |||||| ||  ||||||||||| || |  ||||| |||||||||||||| ||||||    
T  21956454 tttaagtttcatgtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggatat 21956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 25363647 - 25363566
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgt--tttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    |||||||||||||||||||| |||||| | |  |||||| ||| ||||||||||| ||||  ||||| ||||||||||||||    
T  25363647 tttaagtttcatgtttgtttcagatagatctcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgttt 25363566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 14966514 - 14966429
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||| ||| ||||||||||||||||| |  |||||| ||| ||||||| ||| || || ||||| |||||||||||||| |||||    
T  14966514 tttaaattttatgtttgttttagatagatcgtttaaggttctaaggttttagataggttctttaagtttcgagtttgtttcggata 14966429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 15631340 - 15631425
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||| ||||| ||| ||||||||  ||||| || | ||||||||||| ||||  ||||| |||||||||||||| |||||    
T  15631340 tttaagtttcctgtttatttcagataggtcctttaaatttctaaggtttcagatagatcctttaagtttcgagtttgtttcggata 15631425  T

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Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 41898136 - 41898220
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    ||||||||||| |||||||| |||| |||  |||||||| | ||||||||||| || ||||| || |||||||||||||| |||||    
T  41898136 tttaagtttcacgtttgtttcagatgggtcctttaagtttctaaggtttcagataggttttt-aagtttcgagtttgtttcggata 41898220  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 6112093 - 6112013
Alignment:
Q  126 ttttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||||||||   ||||||||| ||||||| ||||||||| | ||||||||||| || |  ||||| ||||||||||||||    
T  6112093 ttttaagtttggagtttgttttggataggtcttttaagtttctaaggtttcagataggtcgtttaagtttcgagtttgttt 6112013  T

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Target: scaffold0062 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 11733 - 11818
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttttggata 211  Q
    |||||||||||||||||||| |||||| |  |||||| ||||||||||||||| || |  ||||| ||| |||||||||| |||||    
T  11733 tttaagtttcatgtttgtttcagatagatcctttaagtttcgaaggtttcagataggtcctttaagtttggagtttgtttcggata 11818  T

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Target: scaffold0051 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 60491 - 60570
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaag-ttcgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||||||||| |||||||| ||||||||  |||||| ||| ||||||||||| || |  ||||| ||||||||||||||    
T  60491 tttaagtttcacgtttgtttcagataggtactttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttt 60570  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 24012597 - 24012518
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    ||||||||||| |||||||| |||||| |  |||||||| | ||||||||||| || |  ||||||||||||||||||||    
T  24012597 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgttt 24012518  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 33041086 - 33040998
Alignment:
Q  127 tttaagtttcatgtttgttttagataggtgttttaagttcg-aaggtttcagacagattttttaaatttcgagtttgttttggatatat 214  Q
    ||||||||||| |||||||| ||||||||  |||||||| | ||||||||||| || |  ||||| |||  ||||||||| ||||||||    
T  33041086 tttaagtttcacgtttgtttcagataggtcctttaagtttgtaaggtttcagataggtcctttaagtttgaagtttgtttcggatatat 33040998  T

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Target: scaffold0182 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 22529 - 22449
Alignment:
Q  126 ttttaagtttcatgtttgttttagataggtgttttaagtt-cgaaggtttcagacagattttttaaatttcgagtttgttt 205  Q
    |||||||||| | |||||||| ||||||||  ||||| || | || |||||||| ||||| ||||| ||||||||||||||    
T  22529 ttttaagtttaacgtttgtttcagataggtcctttaaatttctaaagtttcagatagattctttaagtttcgagtttgttt 22449  T

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