View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3918_high_229 (Length: 209)
Name: NF3918_high_229
Description: NF3918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3918_high_229 |
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Alignment Details
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 36804772 - 36804953
Alignment:
| Q |
14 |
caaaggcatcatctatcgtagatcctagtggttgaacctacactgtattctacacaaatcaatggacaatgttaagtgttaaaatatctagtattattaa |
113 |
Q |
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| T |
36804772 |
caaaggcatcatctatcatagatcctagtggttgaacctacattgtattctacacaaatcaatggacaatgttaagtgttaaaatatctagtattattaa |
36804871 |
T |
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| Q |
114 |
gcatgtttaatggacatatatccatcataaaatgaatcacaacatcaatctatttttacaaaaccaaaaccttacgattgat |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
36804872 |
gcatgtttaatggacatatatccatcataaaatgaatcacaagatcaatctatttttacaaaaccaaaaccttacgattgat |
36804953 |
T |
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