View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3918_low_132 (Length: 282)

Name: NF3918_low_132
Description: NF3918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3918_low_132
NF3918_low_132
[»] chr7 (59 HSPs)
chr7 (171-265)||(6243159-6243253)
chr7 (55-132)||(38578866-38578943)
chr7 (54-131)||(48804717-48804794)
chr7 (54-124)||(5069813-5069883)
chr7 (54-132)||(17748380-17748458)
chr7 (54-124)||(24983416-24983487)
chr7 (64-119)||(28396168-28396223)
chr7 (54-124)||(4195200-4195270)
chr7 (54-132)||(22974000-22974078)
chr7 (54-132)||(39420870-39420948)
chr7 (54-131)||(13095892-13095969)
chr7 (55-132)||(41945506-41945583)
chr7 (54-130)||(29151975-29152051)
chr7 (72-131)||(36619270-36619329)
chr7 (54-132)||(22993365-22993443)
chr7 (54-132)||(34659259-34659337)
chr7 (54-131)||(10047874-10047951)
chr7 (54-119)||(48551903-48551968)
chr7 (55-131)||(27028313-27028389)
chr7 (54-126)||(42210260-42210332)
chr7 (54-126)||(43861970-43862042)
chr7 (55-126)||(3353463-3353534)
chr7 (54-125)||(8734684-8734755)
chr7 (65-132)||(23658212-23658279)
chr7 (54-125)||(39474980-39475051)
chr7 (61-124)||(41267929-41267992)
chr7 (54-132)||(1605974-1606052)
chr7 (57-131)||(18785703-18785777)
chr7 (65-131)||(45697199-45697265)
chr7 (56-131)||(27875088-27875163)
chr7 (54-125)||(43925552-43925623)
chr7 (55-125)||(3603397-3603467)
chr7 (54-132)||(14650350-14650428)
chr7 (54-132)||(28744195-28744273)
chr7 (54-112)||(42032149-42032207)
chr7 (54-116)||(48244354-48244416)
chr7 (54-131)||(47341910-47341987)
chr7 (79-119)||(30827338-30827378)
chr7 (54-118)||(32768984-32769048)
chr7 (55-130)||(22573847-22573922)
chr7 (55-125)||(365180-365250)
chr7 (55-125)||(29805439-29805509)
chr7 (66-131)||(14535325-14535390)
chr7 (54-123)||(32823285-32823354)
chr7 (54-119)||(43346777-43346842)
chr7 (64-125)||(45960011-45960072)
chr7 (55-119)||(4705983-4706047)
chr7 (54-118)||(21530795-21530859)
chr7 (56-116)||(26423288-26423347)
chr7 (76-131)||(4973130-4973185)
chr7 (54-109)||(34127643-34127698)
chr7 (64-131)||(39230533-39230600)
chr7 (64-114)||(5039426-5039476)
chr7 (55-125)||(37514961-37515031)
chr7 (66-126)||(16802162-16802222)
chr7 (64-132)||(19914711-19914779)
chr7 (75-130)||(23060714-23060767)
chr7 (58-118)||(38988947-38989006)
chr7 (54-118)||(49142667-49142731)
[»] chr5 (76 HSPs)
chr5 (54-132)||(42086358-42086436)
chr5 (54-132)||(9805035-9805113)
chr5 (54-132)||(12705045-12705123)
chr5 (54-131)||(1538463-1538540)
chr5 (55-132)||(14588616-14588693)
chr5 (54-131)||(20255401-20255478)
chr5 (54-132)||(8513550-8513628)
chr5 (54-132)||(9812903-9812981)
chr5 (54-132)||(12766162-12766240)
chr5 (56-126)||(20525875-20525945)
chr5 (54-132)||(23383688-23383766)
chr5 (54-131)||(39099777-39099854)
chr5 (54-131)||(42861216-42861293)
chr5 (55-119)||(27648424-27648488)
chr5 (54-132)||(3653912-3653990)
chr5 (54-132)||(5731918-5731996)
chr5 (54-132)||(40117446-40117524)
chr5 (54-132)||(43399159-43399237)
chr5 (56-125)||(15034113-15034182)
chr5 (54-131)||(19572756-19572833)
chr5 (54-115)||(28857194-28857255)
chr5 (56-132)||(42291505-42291581)
chr5 (54-125)||(14728121-14728192)
chr5 (55-130)||(24875378-24875453)
chr5 (54-132)||(7866612-7866690)
chr5 (54-132)||(9168251-9168329)
chr5 (54-132)||(18327791-18327869)
chr5 (54-132)||(20682615-20682693)
chr5 (54-132)||(38897717-38897795)
chr5 (54-131)||(13664292-13664369)
chr5 (55-132)||(25417182-25417259)
chr5 (55-108)||(25950593-25950646)
chr5 (55-119)||(2485240-2485304)
chr5 (54-130)||(21375384-21375460)
chr5 (54-110)||(28857002-28857058)
chr5 (54-126)||(30349616-30349688)
chr5 (56-132)||(37263271-37263347)
chr5 (54-118)||(41163458-41163522)
chr5 (75-118)||(14974343-14974386)
chr5 (54-125)||(24653810-24653880)
chr5 (66-124)||(6764467-6764525)
chr5 (75-125)||(7336658-7336708)
chr5 (54-125)||(18136274-18136349)
chr5 (54-132)||(23247350-23247427)
chr5 (54-131)||(22295248-22295325)
chr5 (89-130)||(25452958-25452999)
chr5 (54-131)||(27484193-27484270)
chr5 (54-130)||(7616953-7617029)
chr5 (55-119)||(18045683-18045746)
chr5 (54-130)||(22655156-22655231)
chr5 (54-110)||(36783296-36783352)
chr5 (67-130)||(35245017-35245080)
chr5 (54-132)||(14152081-14152159)
chr5 (54-120)||(14235712-14235778)
chr5 (54-119)||(17693338-17693404)
chr5 (54-132)||(41801008-41801086)
chr5 (54-131)||(4016253-4016330)
chr5 (54-119)||(5079375-5079439)
chr5 (79-132)||(35813021-35813074)
chr5 (56-132)||(19839358-19839434)
chr5 (55-126)||(11845800-11845871)
chr5 (54-125)||(18294482-18294553)
chr5 (55-118)||(20692978-20693041)
chr5 (55-130)||(21149767-21149842)
chr5 (67-118)||(23260704-23260755)
chr5 (55-126)||(24463885-24463956)
chr5 (54-109)||(38296728-38296783)
chr5 (54-124)||(16757417-16757487)
chr5 (54-132)||(18262616-18262694)
chr5 (54-132)||(20590030-20590108)
chr5 (54-132)||(24499013-24499091)
chr5 (66-132)||(32874818-32874884)
chr5 (67-129)||(35561829-35561891)
chr5 (89-118)||(7308397-7308426)
chr5 (54-119)||(40773317-40773382)
chr5 (56-108)||(40060339-40060391)
[»] chr6 (43 HSPs)
chr6 (54-131)||(19089533-19089610)
chr6 (54-124)||(14783418-14783488)
chr6 (54-131)||(6606095-6606172)
chr6 (54-132)||(8611972-8612050)
chr6 (54-132)||(9633623-9633701)
chr6 (54-132)||(21898682-21898760)
chr6 (54-131)||(5253221-5253298)
chr6 (54-132)||(3601118-3601196)
chr6 (54-131)||(13036002-13036079)
chr6 (55-131)||(8938746-8938822)
chr6 (54-126)||(30788851-30788923)
chr6 (66-132)||(29444775-29444841)
chr6 (54-127)||(30410484-30410557)
chr6 (67-131)||(9179747-9179811)
chr6 (54-114)||(34954617-34954677)
chr6 (55-126)||(29333138-29333209)
chr6 (54-132)||(3587943-3588021)
chr6 (56-118)||(8149797-8149859)
chr6 (54-124)||(8932703-8932773)
chr6 (54-124)||(8944169-8944239)
chr6 (56-130)||(11142639-11142713)
chr6 (54-132)||(14107356-14107434)
chr6 (54-124)||(31129219-31129289)
chr6 (54-126)||(12606470-12606542)
chr6 (54-124)||(12635856-12635926)
chr6 (65-126)||(2271312-2271373)
chr6 (54-107)||(13584444-13584497)
chr6 (54-126)||(8888922-8888993)
chr6 (54-118)||(13468981-13469045)
chr6 (54-118)||(14326045-14326109)
chr6 (54-118)||(14419055-14419119)
chr6 (67-131)||(24671877-24671941)
chr6 (54-125)||(5029858-5029929)
chr6 (67-118)||(17114908-17114959)
chr6 (64-131)||(32157175-32157242)
chr6 (54-124)||(21167417-21167487)
chr6 (55-132)||(9366423-9366499)
chr6 (88-131)||(9147336-9147379)
chr6 (57-96)||(32048511-32048550)
chr6 (65-126)||(374983-375044)
chr6 (89-126)||(13391326-13391363)
chr6 (88-125)||(19230591-19230628)
chr6 (64-112)||(15643842-15643890)
[»] chr4 (76 HSPs)
chr4 (56-132)||(6032643-6032719)
chr4 (55-132)||(7246645-7246722)
chr4 (56-125)||(40780861-40780930)
chr4 (54-132)||(38075468-38075546)
chr4 (55-131)||(29895823-29895899)
chr4 (54-132)||(16450335-16450413)
chr4 (54-132)||(38166062-38166140)
chr4 (54-132)||(52950117-52950195)
chr4 (55-132)||(2559342-2559419)
chr4 (64-125)||(8889064-8889125)
chr4 (55-132)||(42722576-42722653)
chr4 (54-126)||(4738659-4738731)
chr4 (54-126)||(6779252-6779324)
chr4 (54-132)||(5472846-5472924)
chr4 (56-126)||(13073579-13073649)
chr4 (54-132)||(16645153-16645231)
chr4 (54-132)||(36145213-36145291)
chr4 (54-132)||(49260663-49260741)
chr4 (55-132)||(43458648-43458725)
chr4 (55-131)||(31588722-31588798)
chr4 (54-118)||(38168305-38168369)
chr4 (60-124)||(46108734-46108798)
chr4 (54-118)||(48834698-48834762)
chr4 (54-126)||(53599101-53599173)
chr4 (54-125)||(55921076-55921147)
chr4 (54-132)||(17080078-17080156)
chr4 (54-124)||(29588779-29588849)
chr4 (55-117)||(30317283-30317345)
chr4 (54-132)||(36262765-36262843)
chr4 (58-119)||(1940779-1940840)
chr4 (67-132)||(20532420-20532485)
chr4 (57-126)||(21429342-21429411)
chr4 (54-131)||(24850625-24850702)
chr4 (54-119)||(50485991-50486056)
chr4 (87-131)||(8064829-8064873)
chr4 (54-118)||(47682380-47682444)
chr4 (55-126)||(14567280-14567351)
chr4 (54-121)||(38841366-38841433)
chr4 (64-119)||(54946297-54946352)
chr4 (54-132)||(3159467-3159545)
chr4 (54-132)||(10541051-10541128)
chr4 (54-132)||(20128344-20128422)
chr4 (54-132)||(47078493-47078571)
chr4 (87-131)||(1446862-1446906)
chr4 (55-131)||(15829735-15829811)
chr4 (54-126)||(24166491-24166563)
chr4 (55-131)||(42722378-42722454)
chr4 (55-126)||(14124057-14124128)
chr4 (55-126)||(37369041-37369112)
chr4 (65-132)||(40272340-40272407)
chr4 (55-125)||(49952144-49952215)
chr4 (66-116)||(3507321-3507371)
chr4 (54-132)||(12703543-12703621)
chr4 (54-132)||(14858745-14858823)
chr4 (65-131)||(20421809-20421875)
chr4 (55-113)||(43468401-43468459)
chr4 (57-126)||(295534-295603)
chr4 (89-126)||(15839968-15840005)
chr4 (54-131)||(17946525-17946602)
chr4 (54-126)||(14597898-14597970)
chr4 (54-126)||(21192681-21192753)
chr4 (56-132)||(33647756-33647832)
chr4 (54-130)||(35359773-35359849)
chr4 (65-125)||(48317284-48317344)
chr4 (54-125)||(18531561-18531632)
chr4 (54-113)||(25406561-25406620)
chr4 (54-124)||(4986236-4986306)
chr4 (56-110)||(26237422-26237476)
chr4 (54-108)||(27531668-27531722)
chr4 (54-132)||(48015071-48015149)
chr4 (61-127)||(53354572-53354638)
chr4 (87-124)||(20354680-20354717)
chr4 (66-119)||(27248474-27248527)
chr4 (55-116)||(45721137-45721198)
chr4 (66-122)||(4736642-4736698)
chr4 (90-130)||(25103783-25103823)
[»] chr2 (73 HSPs)
chr2 (55-131)||(14169608-14169684)
chr2 (54-132)||(25540402-25540480)
chr2 (54-131)||(16325626-16325703)
chr2 (54-126)||(7747310-7747382)
chr2 (54-132)||(3643885-3643963)
chr2 (64-126)||(39201516-39201578)
chr2 (54-126)||(22593170-22593241)
chr2 (54-132)||(10823090-10823168)
chr2 (54-132)||(41220665-41220743)
chr2 (54-119)||(3811689-3811754)
chr2 (54-119)||(20116610-20116675)
chr2 (55-132)||(35946768-35946845)
chr2 (55-132)||(38962793-38962870)
chr2 (54-131)||(41031904-41031981)
chr2 (55-131)||(6358150-6358226)
chr2 (66-126)||(10026626-10026686)
chr2 (66-125)||(10046487-10046546)
chr2 (55-125)||(12864261-12864331)
chr2 (54-132)||(18902528-18902606)
chr2 (54-132)||(38005432-38005510)
chr2 (54-132)||(42770649-42770727)
chr2 (54-131)||(8410162-8410239)
chr2 (54-131)||(34346285-34346362)
chr2 (54-126)||(11069914-11069986)
chr2 (54-126)||(12455346-12455418)
chr2 (56-131)||(20612534-20612610)
chr2 (65-131)||(331532-331598)
chr2 (54-132)||(44139514-44139592)
chr2 (54-124)||(44945631-44945701)
chr2 (54-126)||(13026409-13026481)
chr2 (54-118)||(26805340-26805404)
chr2 (55-131)||(33005782-33005858)
chr2 (55-126)||(2550904-2550975)
chr2 (55-126)||(9360747-9360818)
chr2 (54-125)||(37560210-37560281)
chr2 (55-126)||(44773299-44773370)
chr2 (54-132)||(5035318-5035396)
chr2 (55-125)||(18649025-18649095)
chr2 (55-132)||(16034967-16035044)
chr2 (73-118)||(24179612-24179657)
chr2 (55-132)||(27725970-27726047)
chr2 (66-131)||(28525465-28525530)
chr2 (64-132)||(10669622-10669690)
chr2 (54-118)||(34130300-34130364)
chr2 (60-131)||(20963114-20963185)
chr2 (56-119)||(21641993-21642056)
chr2 (54-125)||(28616377-28616448)
chr2 (54-125)||(29421319-29421390)
chr2 (89-132)||(41187879-41187922)
chr2 (66-132)||(13104835-13104901)
chr2 (55-108)||(792208-792261)
chr2 (56-125)||(2784969-2785038)
chr2 (54-131)||(15234059-15234136)
chr2 (54-119)||(29422258-29422323)
chr2 (56-112)||(1773644-1773700)
chr2 (54-118)||(34722724-34722788)
chr2 (56-126)||(36480438-36480505)
chr2 (54-110)||(44023347-44023403)
chr2 (54-125)||(2528339-2528410)
chr2 (64-119)||(7787099-7787154)
chr2 (67-130)||(16813176-16813239)
chr2 (67-130)||(16852455-16852518)
chr2 (66-125)||(34356243-34356302)
chr2 (54-117)||(34738331-34738394)
chr2 (61-116)||(35443870-35443925)
chr2 (55-126)||(39806884-39806955)
chr2 (90-132)||(21286474-21286516)
chr2 (54-132)||(45263665-45263743)
chr2 (65-126)||(33634448-33634509)
chr2 (84-132)||(15079513-15079561)
chr2 (56-132)||(21099003-21099079)
chr2 (54-118)||(25549772-25549836)
chr2 (54-106)||(44548722-44548774)
[»] chr3 (79 HSPs)
chr3 (54-125)||(29127956-29128027)
chr3 (54-126)||(49021202-49021274)
chr3 (54-132)||(28572210-28572288)
chr3 (54-124)||(47219182-47219252)
chr3 (55-124)||(47471869-47471938)
chr3 (55-132)||(54261256-54261333)
chr3 (54-126)||(15320222-15320294)
chr3 (55-131)||(35315987-35316063)
chr3 (54-125)||(3136693-3136764)
chr3 (54-123)||(7310702-7310771)
chr3 (54-131)||(25294991-25295068)
chr3 (66-131)||(30767258-30767323)
chr3 (54-131)||(47749104-47749181)
chr3 (54-130)||(23511599-23511675)
chr3 (55-131)||(29762155-29762231)
chr3 (56-131)||(3507534-3507609)
chr3 (56-131)||(49198382-49198457)
chr3 (54-125)||(51060280-51060351)
chr3 (77-130)||(3755602-3755655)
chr3 (54-131)||(7328875-7328951)
chr3 (55-132)||(19146991-19147068)
chr3 (54-131)||(29135944-29136021)
chr3 (54-131)||(43330731-43330808)
chr3 (54-119)||(45402350-45402415)
chr3 (66-126)||(33251698-33251758)
chr3 (55-131)||(45877485-45877561)
chr3 (64-132)||(50405612-50405680)
chr3 (68-132)||(52364813-52364877)
chr3 (57-132)||(4638184-4638259)
chr3 (54-125)||(26361966-26362037)
chr3 (54-125)||(54237485-54237556)
chr3 (55-125)||(13367461-13367531)
chr3 (58-132)||(26207804-26207878)
chr3 (66-132)||(41630523-41630589)
chr3 (54-131)||(928631-928708)
chr3 (57-106)||(8683242-8683291)
chr3 (59-132)||(10040586-10040659)
chr3 (54-131)||(26043843-26043920)
chr3 (54-111)||(36043673-36043730)
chr3 (54-119)||(44064587-44064652)
chr3 (55-132)||(45450447-45450524)
chr3 (54-130)||(7648772-7648848)
chr3 (54-113)||(7650276-7650335)
chr3 (89-132)||(39849101-39849144)
chr3 (66-125)||(49543556-49543615)
chr3 (56-131)||(53649758-53649833)
chr3 (54-132)||(24506647-24506725)
chr3 (54-124)||(48342058-48342128)
chr3 (54-119)||(13893969-13894034)
chr3 (54-123)||(50753340-50753409)
chr3 (56-132)||(6462442-6462518)
chr3 (54-126)||(15084944-15085016)
chr3 (56-132)||(51682955-51683031)
chr3 (54-118)||(55069678-55069742)
chr3 (64-131)||(33688982-33689049)
chr3 (56-119)||(34662320-34662383)
chr3 (56-95)||(54448326-54448365)
chr3 (57-119)||(8362620-8362682)
chr3 (56-106)||(11393476-11393526)
chr3 (54-132)||(35998570-35998648)
chr3 (67-132)||(8164583-8164648)
chr3 (55-112)||(22909833-22909890)
chr3 (55-132)||(37319889-37319966)
chr3 (64-125)||(40660336-40660397)
chr3 (73-118)||(47303507-47303552)
chr3 (66-114)||(19873420-19873468)
chr3 (54-118)||(29195318-29195382)
chr3 (54-118)||(31072922-31072986)
chr3 (56-119)||(2029268-2029331)
chr3 (77-132)||(32873571-32873626)
chr3 (54-125)||(34374441-34374512)
chr3 (72-127)||(40944918-40944972)
chr3 (66-132)||(30045851-30045917)
chr3 (65-131)||(32522010-32522076)
chr3 (54-116)||(47164152-47164214)
chr3 (54-131)||(2668092-2668169)
chr3 (89-118)||(42412808-42412837)
chr3 (54-118)||(10043726-10043790)
chr3 (67-119)||(24146340-24146392)
[»] chr8 (49 HSPs)
chr8 (54-132)||(10927640-10927718)
chr8 (56-132)||(4479296-4479372)
chr8 (55-132)||(18374044-18374121)
chr8 (54-119)||(43027352-43027417)
chr8 (54-132)||(8141136-8141214)
chr8 (54-132)||(26570958-26571036)
chr8 (54-131)||(9859993-9860070)
chr8 (54-131)||(45521203-45521280)
chr8 (56-124)||(15884556-15884624)
chr8 (54-132)||(2964110-2964188)
chr8 (54-132)||(6100506-6100584)
chr8 (54-132)||(43032935-43033013)
chr8 (54-131)||(27975926-27976003)
chr8 (54-131)||(28033195-28033272)
chr8 (55-131)||(33401799-33401874)
chr8 (54-125)||(14846616-14846687)
chr8 (54-132)||(583846-583924)
chr8 (54-132)||(24837276-24837354)
chr8 (54-131)||(2467116-2467193)
chr8 (54-131)||(3418511-3418588)
chr8 (54-119)||(8997542-8997607)
chr8 (54-131)||(17981476-17981553)
chr8 (55-126)||(36662444-36662515)
chr8 (65-131)||(3567939-3568005)
chr8 (54-132)||(10535402-10535480)
chr8 (64-122)||(13357964-13358022)
chr8 (56-125)||(3379812-3379881)
chr8 (55-132)||(44893277-44893354)
chr8 (54-114)||(8803106-8803166)
chr8 (54-126)||(11298265-11298337)
chr8 (77-125)||(22958811-22958859)
chr8 (64-119)||(24938570-24938625)
chr8 (89-131)||(29933807-29933849)
chr8 (54-99)||(4772049-4772094)
chr8 (54-131)||(14666069-14666146)
chr8 (55-132)||(23895602-23895679)
chr8 (54-118)||(16291201-16291265)
chr8 (54-118)||(16893985-16894047)
chr8 (54-130)||(22212513-22212589)
chr8 (55-126)||(68097-68168)
chr8 (54-125)||(3692874-3692945)
chr8 (55-117)||(8817082-8817144)
chr8 (54-124)||(39969913-39969983)
chr8 (54-119)||(993235-993300)
chr8 (64-125)||(11785956-11786017)
chr8 (62-118)||(1012983-1013039)
chr8 (72-132)||(6042855-6042915)
chr8 (56-124)||(7673657-7673725)
chr8 (66-118)||(25848224-25848276)
[»] chr1 (71 HSPs)
chr1 (54-125)||(26325850-26325921)
chr1 (54-132)||(5855553-5855631)
chr1 (54-131)||(4581681-4581758)
chr1 (54-131)||(8764023-8764100)
chr1 (54-131)||(10422820-10422897)
chr1 (54-131)||(17642003-17642080)
chr1 (54-130)||(9659178-9659254)
chr1 (54-125)||(41663855-41663926)
chr1 (54-132)||(10172970-10173048)
chr1 (54-132)||(30927726-30927804)
chr1 (54-124)||(34697374-34697444)
chr1 (54-119)||(26660182-26660246)
chr1 (54-131)||(49078146-49078223)
chr1 (54-131)||(50503360-50503437)
chr1 (60-132)||(10336547-10336619)
chr1 (54-126)||(10507735-10507807)
chr1 (55-118)||(5504076-5504139)
chr1 (54-117)||(11397888-11397951)
chr1 (54-132)||(37339851-37339929)
chr1 (54-132)||(43959820-43959898)
chr1 (54-132)||(44969695-44969773)
chr1 (54-132)||(45361881-45361959)
chr1 (54-131)||(18915899-18915976)
chr1 (54-131)||(32142845-32142922)
chr1 (54-119)||(35211171-35211236)
chr1 (54-118)||(32916-32980)
chr1 (54-130)||(16956499-16956575)
chr1 (65-132)||(14254278-14254345)
chr1 (55-130)||(14357788-14357863)
chr1 (65-132)||(33418125-33418192)
chr1 (54-132)||(33498838-33498916)
chr1 (54-132)||(34719807-34719885)
chr1 (54-108)||(51437512-51437566)
chr1 (54-131)||(2980930-2981007)
chr1 (55-132)||(16263576-16263653)
chr1 (58-126)||(17092480-17092548)
chr1 (54-125)||(35908796-35908865)
chr1 (54-130)||(50094937-50095013)
chr1 (54-125)||(32150921-32150992)
chr1 (54-132)||(18808296-18808374)
chr1 (54-132)||(46929737-46929815)
chr1 (67-132)||(12036756-12036821)
chr1 (55-132)||(33004015-33004092)
chr1 (54-130)||(17389804-17389880)
chr1 (55-126)||(45726433-45726504)
chr1 (67-118)||(48761221-48761272)
chr1 (54-108)||(892301-892355)
chr1 (54-124)||(6899597-6899667)
chr1 (54-132)||(12744522-12744600)
chr1 (54-132)||(12755512-12755590)
chr1 (61-131)||(42710144-42710214)
chr1 (90-132)||(48798105-48798147)
chr1 (54-111)||(1764196-1764253)
chr1 (55-132)||(2567307-2567384)
chr1 (55-132)||(18649352-18649429)
chr1 (55-116)||(31576547-31576608)
chr1 (55-124)||(38791610-38791679)
chr1 (54-131)||(41696597-41696674)
chr1 (55-132)||(50371834-50371911)
chr1 (82-126)||(13265975-13266019)
chr1 (54-118)||(15466010-15466074)
chr1 (90-125)||(28324615-28324650)
chr1 (54-112)||(3850741-3850799)
chr1 (54-132)||(17358470-17358548)
chr1 (54-124)||(18708539-18708609)
chr1 (54-132)||(25178575-25178653)
chr1 (54-127)||(9853276-9853349)
chr1 (87-132)||(17988692-17988737)
chr1 (55-124)||(21849205-21849274)
chr1 (65-126)||(40288487-40288548)
chr1 (54-110)||(47084175-47084231)
[»] scaffold0291 (1 HSPs)
scaffold0291 (54-131)||(6889-6966)
[»] scaffold0016 (1 HSPs)
scaffold0016 (54-132)||(8699-8777)
[»] scaffold0009 (2 HSPs)
scaffold0009 (55-125)||(42831-42901)
scaffold0009 (56-112)||(9495-9551)
[»] scaffold0002 (2 HSPs)
scaffold0002 (54-131)||(604-681)
scaffold0002 (54-132)||(319455-319533)
[»] scaffold0170 (1 HSPs)
scaffold0170 (65-132)||(9878-9945)
[»] scaffold0010 (1 HSPs)
scaffold0010 (54-124)||(155709-155779)
[»] scaffold0376 (1 HSPs)
scaffold0376 (55-132)||(12703-12780)
[»] scaffold0384 (1 HSPs)
scaffold0384 (60-132)||(6005-6077)
[»] scaffold0316 (1 HSPs)
scaffold0316 (54-126)||(1612-1684)
[»] scaffold0029 (1 HSPs)
scaffold0029 (54-125)||(41084-41155)
[»] scaffold0011 (2 HSPs)
scaffold0011 (55-114)||(224368-224427)
scaffold0011 (64-118)||(186564-186618)
[»] scaffold0209 (1 HSPs)
scaffold0209 (54-132)||(12606-12684)
[»] scaffold0086 (1 HSPs)
scaffold0086 (55-132)||(26216-26293)
[»] scaffold0006 (1 HSPs)
scaffold0006 (58-119)||(68560-68621)
[»] scaffold0004 (2 HSPs)
scaffold0004 (54-131)||(7833-7910)
scaffold0004 (54-130)||(94978-95055)
[»] scaffold0116 (1 HSPs)
scaffold0116 (61-132)||(17423-17494)
[»] scaffold0045 (1 HSPs)
scaffold0045 (55-130)||(58032-58107)
[»] scaffold0005 (2 HSPs)
scaffold0005 (55-126)||(250024-250095)
scaffold0005 (54-126)||(219408-219480)
[»] scaffold1333 (1 HSPs)
scaffold1333 (171-219)||(1985-2033)
[»] scaffold0223 (1 HSPs)
scaffold0223 (55-113)||(16931-16989)
[»] scaffold0050 (1 HSPs)
scaffold0050 (54-118)||(72802-72866)
[»] scaffold0079 (1 HSPs)
scaffold0079 (54-96)||(8232-8274)
[»] scaffold0041 (1 HSPs)
scaffold0041 (55-125)||(25125-25195)
[»] scaffold0024 (1 HSPs)
scaffold0024 (54-132)||(149418-149496)
[»] scaffold0001 (1 HSPs)
scaffold0001 (54-132)||(65150-65228)


Alignment Details
Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 171 - 265
Target Start/End: Original strand, 6243159 - 6243253
Alignment:
Q  171 tagtacgttgagaatattaagtttgttgatgaacacaatgctatagaagccggagtttgaggtagaattggataaaaaggaagatcctttgaaga 265  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  6243159 tagtaggttgagaatattaagcttgttgatgaacagaatgctatagaagccagagtttgaggtggaattggattaaaaggaagatcctttgaaga 6243253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 38578866 - 38578943
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||| |||||    
T  38578866 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagc 38578943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 48804794 - 48804717
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  48804794 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaag 48804717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 5069813 - 5069883
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||  ||||||||||||||||||||    
T  5069813 gctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacact 5069883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 17748380 - 17748458
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||| |||||| |||||    
T  17748380 gctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagc 17748458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 24983416 - 24983487
Alignment:
Q  54 gctttcgcatcggtttcc-gacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  24983416 gctttcgcatcggtttccagacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 28396168 - 28396223
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28396168 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgc 28396223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 4195200 - 4195270
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    |||||||||||||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||| ||||    
T  4195200 gctttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcact 4195270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 22974078 - 22974000
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||  ||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||    
T  22974078 gctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagc 22974000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 39420948 - 39420870
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  39420948 gcttttgcaccggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagc 39420870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 13095969 - 13095892
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||| ||| ||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||| ||||    
T  13095969 gcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaag 13095892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 41945583 - 41945506
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| || |||||||| |||||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||    
T  41945583 ctttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagc 41945506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 29152051 - 29151975
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||| || || |||||||||||| ||||||||||    
T  29152051 gctttcgcatcggtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcactggtcaa 29151975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 36619270 - 36619329
Alignment:
Q  72 gacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  36619270 gacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaag 36619329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 22993365 - 22993443
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||| ||||||||||||||   |||||||||||| || |||||||||||||||||||||| |||||    
T  22993365 gctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagc 22993443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 34659337 - 34659259
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||| |||| |||||| ||| | ||||||||||||||| ||||||||||||||| ||||||||||||    
T  34659337 gctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagc 34659259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 10047874 - 10047951
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||||||||| ||| |||||||||| | |||||||||||||||| ||| |||||| ||||    
T  10047874 gctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaag 10047951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 48551968 - 48551903
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||| |||||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||    
T  48551968 gctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgc 48551903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 27028389 - 27028313
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||| ||||||||||||||||||||||   |||||||||| ||||||| |||||||||||| |||||| ||||    
T  27028389 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaag 27028313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 42210260 - 42210332
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||||||||||||||||||||||| ||| |  || ||||||||||| ||||||||||||||| ||||||    
T  42210260 gctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactgg 42210332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 43861970 - 43862042
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| |||||| ||| |||||||||||  | |||||||||||||||||||||||||||||| ||||||    
T  43861970 gctttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactgg 43862042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 3353534 - 3353463
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||| ||||||| || ||| ||||||| ||||||||||||||||| ||||||||||||||| ||||||    
T  3353534 ctttcgcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactgg 3353463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 8734684 - 8734755
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| |||||||||||||||||||||| | ||||||||| ||||| ||||| ||||||||| |||||    
T  8734684 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactg 8734755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 23658279 - 23658212
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||| |||||||||||| | ||||||||||||||||| || ||||||||||||||||||| |||||    
T  23658279 ggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagc 23658212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 39475051 - 39474980
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||  ||||| |||||||| |||||| |||||||||||||||||||||||||||| |||| |||||    
T  39475051 gctttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactg 39474980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 41267929 - 41267992
Alignment:
Q  61 catcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||||||||||| ||||||| |||||||||||   ||||||||||||||||||||||||    
T  41267929 catcggtttccgacccatcaaaggtggacgactaatctaactcatgcgtagaggcatgcacact 41267992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 1606052 - 1605974
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||| ||||||||||| | |||||||||||||||| || ||||||||||  |||||| |||||    
T  1606052 gctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagc 1605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 18785777 - 18785703
Alignment:
Q  57 ttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||| ||||||||||||||||| ||||  ||||||||||| | |||||||||||||||||| |||||| ||||    
T  18785777 ttcgcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaag 18785703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 45697199 - 45697265
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||||||||||| ||||||||| ||  ||||||||||||||||||| ||||| |||||    
T  45697199 ggtttccgacccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcactgatcaag 45697265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 27875088 - 27875163
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| |||||| |||||||| |||||| |||||||||| || ||||||||||||||||||  |||||| ||||    
T  27875088 tttcgcaccggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaag 27875163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 43925623 - 43925552
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||| |||||||||| || ||| |||||||| || |||||||| |||||||||||||||||||| |||||    
T  43925623 gctttcacatcggtttctgatccatcaaaggtaaacaactaatccagctcatgcgtagaggcatgcgcactg 43925552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 3603467 - 3603397
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||| || |||||||||||||||| ||  |||| ||||||||||| ||||||||||||||| |||||    
T  3603467 ctttcgcaccgatttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcactg 3603397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 14650428 - 14650350
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||| | |||||||||||||   ||||||| |||||||||||||||||||||   ||||||||||||    
T  14650428 gctttcgcaccggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactggtcaagc 14650350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 28744273 - 28744195
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| |  ||||||| ||||  ||||| |||||    
T  28744273 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaagc 28744195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 42032207 - 42032149
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaga 112  Q
    ||||| |||||||||||||||||| ||||||| ||| |||||| |||||||||||||||    
T  42032207 gctttagcatcggtttccgacccatcaaaggtggacaactaattcggctcatgcgtaga 42032149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 48244354 - 48244416
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggca 116  Q
    ||||||||| |||||| ||| |||||||||||   ||||||||||||||||||||||||||||    
T  48244354 gctttcgcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggca 48244416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 47341987 - 47341910
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| || ||||||||||||||| |||  ||||| ||||| |||| ||||||||||||||| |||||| ||||    
T  47341987 gctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaag 47341910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 30827378 - 30827338
Alignment:
Q  79 caaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  30827378 caaaggtagacgactaatccggctcgtgcgtagaggcatgc 30827338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 32769048 - 32768984
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    |||||| || |||||||||| |||||||||||  |||||||||||| ||| ||||||||||||||    
T  32769048 gctttcacaccggtttccgatccaccaaaggtgaacgactaatccgactcgtgcgtagaggcatg 32768984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 22573922 - 22573847
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    |||||||| |||||| | ||||| ||| | | ||||| |||||||||||||||||| |||||||| ||||||||||    
T  22573922 ctttcgcaccggttttcaacccatcaatgatggacgattaatccggctcatgcgtaaaggcatgcgcactggtcaa 22573847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 365250 - 365180
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||||||||| ||||||||||  ||| |   ||||||| ||||||||||||||||||||| |||||    
T  365250 ctttcgcatcggttttcgacccaccactggtgggtcactaatcaggctcatgcgtagaggcatgcgcactg 365180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 29805439 - 29805509
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||  |||||||||| ||| |||||||||||| ||||  ||||||||||||||| ||||| |||||    
T  29805439 ctttcgcactggtttccgactcactaaaggtagacgattaatttggctcatgcgtagagacatgcgcactg 29805509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 14535390 - 14535325
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||| |||||| ||| ||| | |||||||||| |||| |||||||||||||||||||||| ||||    
T  14535390 gtttctgacccatcaatggtgggcgactaatccagctcgtgcgtagaggcatgcacactggccaag 14535325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 32823354 - 32823285
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacac 123  Q
    ||||||||| | |||||||||||| ||| |||   ||||||||||||||| ||||||||||||| |||||    
T  32823354 gctttcgcacccgtttccgacccatcaatggtctgcgactaatccggctcgtgcgtagaggcatacacac 32823285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 43346777 - 43346842
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    |||||||||  ||||||||||||||||||| |   ||||||||||||||| | |||||||||||||    
T  43346777 gctttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgc 43346842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 45960011 - 45960072
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||| ||| |||||||   |||||||||||||| |||||||||||||||| |||||    
T  45960011 cggtttccgatccatcaaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactg 45960072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 4705983 - 4706047
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||| ||||||||| ||| | ||||||||| |||||||||||| |||| |||||||| ||||||    
T  4705983 ctttcacatcggttttcgatctaccaaaggtggacgactaatccagctcgtgcgtagaagcatgc 4706047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 21530859 - 21530795
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||| | ||||||||||||||||||||||   ||| |||| |||||| ||||||||||||||    
T  21530859 gctttcgaaccggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatg 21530795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 26423288 - 26423347
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggca 116  Q
    ||||||| |||||||||||| |||||||||  |||||||||| ||||| ||||||||||||    
T  26423288 tttcgcaccggtttccgacc-accaaaggtgaacgactaatctggctcgtgcgtagaggca 26423347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 4973130 - 4973185
Alignment:
Q  76 caccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||| | ||||||||||||||||| | ||||||||||||| || ||||||||    
T  4973130 caccaaagctggacgactaatccggctcgtacgtagaggcatgcgcattggtcaag 4973185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 34127643 - 34127698
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgt 109  Q
    ||||||||| ||||||  |||||||||||||| | ||||||||||||||| |||||    
T  34127643 gctttcgcaccggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgt 34127698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 39230600 - 39230533
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||| ||| |||||||  || ||| ||||||||||||||||| |||||||||||||| | ||||||    
T  39230600 cggttttcgatccaccaatagtggacaactaatccggctcatgcatagaggcatgcacattagtcaag 39230533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 5039426 - 5039476
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagagg 114  Q
    |||||| ||| |||||||||||   ||||||||||||||||||||||||||    
T  5039426 cggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagagg 5039476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 37515031 - 37514961
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||| || ||||||||||||||| || |||  |||| ||||||||||| ||||||||| ||||| |||||    
T  37515031 ctttcacaccggtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactg 37514961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 16802222 - 16802162
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||| ||||||||||| |||   ||||||||||||||| ||||||||||||| | ||||||    
T  16802222 gttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactgg 16802162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 19914711 - 19914779
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||| | ||||| ||||||| | ||| ||||| ||||||||||||||||||||| || ||| |||||    
T  19914711 cggtttacaacccatcaaaggtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaagc 19914779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 23060767 - 23060714
Alignment:
Q  75 ccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    |||||||||||  |||||||||||| |||||||||  ||||||||||| |||||||    
T  23060767 ccaccaaaggtgaacgactaatccgactcatgcgt--aggcatgcacattggtcaa 23060714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 38989006 - 38988947
Alignment:
Q  58 tcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||| ||||||| |||||||||||| |   |||||||||||| |||||||||||||||||    
T  38989006 tcgcaccggtttc-gacccaccaaagatgagcgactaatccggttcatgcgtagaggcatg 38988947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 49142667 - 49142731
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| |  ||| ||||||| ||||||| | | ||||||||||||| ||||||||||||||    
T  49142667 gctttcgcaccaattttcgacccatcaaaggtgggcaactaatccggctcgtgcgtagaggcatg 49142731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 42086436 - 42086358
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  42086436 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagc 42086358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 9805113 - 9805035
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||    
T  9805113 gctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagc 9805035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 12705123 - 12705045
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||| |||||||||||||| | |||||||||||| ||||||||||| |||||||||||||||||||    
T  12705123 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagc 12705045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 1538540 - 1538463
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||| ||||    
T  1538540 gctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaag 1538463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 14588616 - 14588693
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||| || | |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  14588616 ctttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagc 14588693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 20255478 - 20255401
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| | ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  20255478 gctttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaag 20255401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 8513628 - 8513550
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||||| |||||    
T  8513628 gctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagc 8513550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 9812981 - 9812903
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||| |||||||||||||| | |||||||||||| ||||||||||| ||||||||||||| |||||    
T  9812981 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagc 9812903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 12766240 - 12766162
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||| |||||||||||||| | ||||||||| || ||||||||||||||||||||||||| |||||    
T  12766240 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagc 12766162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 20525945 - 20525875
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||| |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  20525945 tttcgcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 20525875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 23383766 - 23383688
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||| |||||    
T  23383766 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagc 23383688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 39099777 - 39099854
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||| ||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||  |||||| ||||    
T  39099777 gcttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaag 39099854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 42861216 - 42861293
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||| ||||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||| ||||    
T  42861216 gctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaag 42861293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 27648424 - 27648488
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||||    
T  27648424 ctttcgcatcggtttccgatccaccaaagatggacgactaatccggctcatacgtagaggcatgc 27648488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 3653912 - 3653990
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| ||| |||||| ||| ||||||||||| ||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  3653912 gcttttgcaccggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagc 3653990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 5731918 - 5731996
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||||||||| ||||||  |||||||||| ||||||| ||||||||||||| |||||| |||||    
T  5731918 gctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagc 5731996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 40117524 - 40117446
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||| ||| |||||||||||  |||| ||||||||||||||||||||||||||| |||||| |||||    
T  40117524 gctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagc 40117446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 43399237 - 43399159
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||| |||||| || |||||||||||| |||| ||||||||||||||| |||||| |||||    
T  43399237 gctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagc 43399159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 15034182 - 15034113
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||| ||||||||||||| ||| ||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  15034182 tttcacatcggtttccgatccatcaaaggtggacaactaatcaggctcatgcgtagaggcatgcacactg 15034113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 19572833 - 19572756
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||  ||||||| ||||||||| |||  |||||||||||||||||||||||||||||||| |||||| ||||    
T  19572833 gctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaag 19572756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 28857255 - 28857194
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggc 115  Q
    ||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  28857255 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggc 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 42291505 - 42291581
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| |||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||  |||||| |||||    
T  42291505 tttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagc 42291581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 14728192 - 14728121
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| |||||||||||||| |||||||   | ||||||||||||||||||||||||||||| |||||    
T  14728192 gctttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactg 14728121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 24875453 - 24875378
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||||| | ||||||||||| ||||||| ||||| ||||||||||| ||||||||| ||||| ||||||||||    
T  24875453 ctttcgcattgatttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaa 24875378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 7866690 - 7866612
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||  ||||||  ||||||||||||| | |||||||||||| || |||||||||||||||||||||| |||||    
T  7866690 gctttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagc 7866612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 9168251 - 9168329
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| ||| || ||| |||||||| |||||| |||||||||||||||||||||||||||| |||| |||||| |||||    
T  9168251 gcttttgcaccgattttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagc 9168329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 18327869 - 18327791
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| ||||||||||||||||||| |||| | | ||||| ||| |||||||||| ||||||||||||||||| |||||    
T  18327869 gcttttgcatcggtttccgacccactaaagattggcgactgatctggctcatgcgcagaggcatgcacactggccaagc 18327791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 20682615 - 20682693
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||| |||||| |||||| | ||| ||||||||||| ||||||||||||||| |||||| |||||    
T  20682615 gctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagc 20682693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 38897717 - 38897795
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||  ||||||||| ||||||||||| | | ||||||||||||| ||||||||||||||| |||||| |||||    
T  38897717 gctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagc 38897795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 13664369 - 13664292
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| ||||||||||| ||||||||||   ||| ||||| ||||||||||||||||||||| |||||| ||||    
T  13664369 gctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaag 13664292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 25417182 - 25417259
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| ||||||| |||||||||| |||| | |||||||||||||| | ||||||||||||| |||||| |||||    
T  25417182 ctttcgcaccggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagc 25417259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 25950593 - 25950646
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcg 108  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  25950593 ctttcgcatcgattttcgacccaccaaaggtggacgactaatccggctcatgcg 25950646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 2485304 - 2485240
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||||||||||||||||| |||||||   ||||||||||| ||||| |||||||||||||    
T  2485304 ctttcgcatcggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgc 2485240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 21375460 - 21375384
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    |||||||||  ||||||||| ||| ||||| | ||||||||||||| |||||||||||| |||||| ||||||||||    
T  21375460 gctttcgcactggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcactggtcaa 21375384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 28857058 - 28857002
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgta 110  Q
    ||||||||| ||||||||||||||||||||||   ||||||||||||||||||||||    
T  28857058 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgta 28857002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 30349688 - 30349616
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| ||||||||| |||||| ||||| |||||||||| | |||||||| ||||||||||| ||||||    
T  30349688 gctttcgcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactgg 30349616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 37263347 - 37263271
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| |||||||||| |||  |||||| ||||||||||||||||| ||||||||||||||| || ||| |||||    
T  37263347 tttcgcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagc 37263271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 41163458 - 41163522
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| | ||||||||||||| |||||| |||||||||||| |||||||||||||| ||||    
T  41163458 gctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatg 41163522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 14974343 - 14974386
Alignment:
Q  75 ccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  14974343 ccaccaaaggtggacgactaatccggctcatgcgtagaggcatg 14974386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 24653810 - 24653880
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||||||||| ||||||||||| ||| ||||| |||||||||| ||||||||||| |||| |||||    
T  24653810 gctttcgcatcggttttcgacccaccaatggtggacgattaatccggct-atgcgtagaggtatgcgcactg 24653880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 6764467 - 6764525
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    |||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||| ||||    
T  6764467 gtttccgacccaacaaagataggcgactaatccggctcgtgcgtagaggcatgcgcact 6764525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 7336708 - 7336658
Alignment:
Q  75 ccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  7336708 ccaccaaaggtagacgattaatccggctcgtgcgtagaggcatgcgcactg 7336658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 18136274 - 18136349
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaat----ccggctcatgcgtagaggcatgcacactg 125  Q
    ||||| ||| |||||||||||||||||| ||| ||||||||||    |||||||||| ||||||||||||||||||    
T  18136274 gcttttgcaccggtttccgacccaccaatggtggacgactaattaatccggctcatgtgtagaggcatgcacactg 18136349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 23247350 - 23247427
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||| ||||| | ||||||| ||||||||||| ||||| |||||||||||||||| |||| ||||||    
T  23247350 gctttcgcaccggttttcgacc-atcaaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagc 23247427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 22295325 - 22295248
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||||| |||| |||| ||||||| ||  ||||||||||  ||||||||||||||||||| |||||| ||||    
T  22295325 gctttcgcatcgatttctgacctaccaaagataagcgactaatccaactcatgcgtagaggcatgcgcactggccaag 22295248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 25452999 - 25452958
Alignment:
Q  89 cgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  25452999 cgactaatccggctcgtgcgtagaggcatgcacactggtcaa 25452958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 27484270 - 27484193
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||| || |||||||| ||| | ||||| | |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  27484270 gctttcacaccggtttccaacctatcaaagatggacgtctaatccggttcatgcgtagaggcatgcatactggtcaag 27484193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 7617029 - 7616953
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||||| | |||||||| |||||||   | ||||||||||| | |||||||||||||||||||| |||||||||    
T  7617029 gctttcgcaccagtttccgatccaccaataatggacgactaatctgactcatgcgtagaggcatgcatactggtcaa 7616953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 18045746 - 18045683
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||||||||||||| |||| |||||| ||||| |||| ||||||||| ||||||||||||    
T  18045746 ctttcgcatcggtttccgatccactaaaggtggacgattaat-cggctcatgtgtagaggcatgc 18045683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 22655156 - 22655231
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    |||||||||  ||||| |||||||| |||||| ||||||||||| | || |||||||||||||||||||||| ||||    
T  22655156 gctttcgcactggttttcgacccac-aaaggtggacgactaatctgacttatgcgtagaggcatgcacactgatcaa 22655231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 36783352 - 36783296
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgta 110  Q
    ||||| ||| |||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  36783352 gcttttgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcgta 36783296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 35245017 - 35245080
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||| ||| ||||||| | | ||||||| |||||||||||||| |||||||||||||||||    
T  35245017 tttccgaaccatcaaaggtgggcaactaatcaggctcatgcgtagaagcatgcacactggtcaa 35245080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 14152159 - 14152081
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||| ||||| ||| ||| ||| ||| ||||| ||||||||||||||  |||| ||||||||||||| |||||    
T  14152159 gctttcgcataggttttcgatccatcaatggtggacgattaatccggctcatggatagaagcatgcacactggccaagc 14152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 14235712 - 14235778
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgca 120  Q
    ||||| ||||||||||| |||||||||||||| |  |||||||||| ||||||| ||||| ||||||    
T  14235712 gcttttgcatcggtttctgacccaccaaaggtgggtgactaatccgactcatgcttagagtcatgca 14235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 17693338 - 17693404
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtag-acgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||| |||||||| |||||||||| |  | |||||||||| |||||||||||||||||||||    
T  17693338 gctttcgcaccggtttccaacccaccaaaagacggacgactaatctggctcatgcgtagaggcatgc 17693404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 41801086 - 41801008
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||| || || ||||||||||| ||||| |  |||||||||||||||| ||||||||| ||||| || |||||||||    
T  41801086 gctttcacaccgctttccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagc 41801008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 4016253 - 4016330
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||  ||||||||||||||||| |||   | ||||||||||||| || |||||||||||| |||||| ||||    
T  4016253 gctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaag 4016330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 5079439 - 5079375
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||| |||||| ||||| ||||||||| | ||||||||||||||| |||||||| ||||||    
T  5079439 gctttcgcaccggttttcgacc-accaaaggtgggcgactaatccggctcgtgcgtagaagcatgc 5079375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 35813021 - 35813074
Alignment:
Q  79 caaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| ||||||||||||| |||||| |||||| ||||| ||||||||||||    
T  35813021 caaaggtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagc 35813074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 19839434 - 19839358
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||| |||||||| ||| |||||||| ||||||||| | ||| |  |||||||||||| ||||| ||||||    
T  19839434 tttcgcatcgatttccgactcactaaaggtaggcgactaatctgactcgtatgtagaggcatgcgcactgatcaagc 19839358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 11845800 - 11845871
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||| || |||||||| ||||| ||||||| | ||| |||| |||||||| ||||||||||||| ||||||    
T  11845800 ctttcacaccggtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactgg 11845871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 18294482 - 18294553
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||| |||| ||||||||||||||||||| | | ||| |||||||| ||||| ||||||| |||| |||||    
T  18294482 gcttttgcattggtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactg 18294553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 20693041 - 20692978
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    |||||||| |||||||||||||||||||||| ||| ||||||| |  ||||||  |||||||||    
T  20693041 ctttcgcaccggtttccgacccaccaaaggtggacaactaatctgaatcatgcacagaggcatg 20692978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 21149842 - 21149767
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||||||||||| | | ||||||| ||| | ||||||||||  ||| ||||||||| ||||| ||||||||||    
T  21149842 ctttcgcatcggttttctatccaccaatggtgggcgactaatccaactcgtgcgtagagtcatgcgcactggtcaa 21149767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 23260704 - 23260755
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||||| |||||||||| ||||||||||  || ||||||||||||||    
T  23260704 tttccgacccatcaaaggtagaagactaatccgattcgtgcgtagaggcatg 23260755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 24463885 - 24463956
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||| ||| |||||| |||||||  |||||| | ||||||||||||||| ||| ||||||||||| ||||||    
T  24463885 cttttgcaccggttttcgacccagtaaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactgg 24463956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 38296728 - 38296783
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgt 109  Q
    ||||| |||||||||||||||||| ||||||| | ||||||||||| ||| |||||    
T  38296728 gcttttgcatcggtttccgacccatcaaaggtgggcgactaatccgactcgtgcgt 38296783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 16757487 - 16757417
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||||||||||| ||||||| |||| | ||||| |||| |  || |||||||||||||||| ||||    
T  16757487 gctttcgcatcggtttctgacccactaaagatggacgattaattcaacttatgcgtagaggcatgcgcact 16757417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 18262616 - 18262694
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| || ||| ||| ||| || |||| | ||||||||||||||| || ||||||| |||| ||||||||||||    
T  18262616 gctttcgcaccgattttcgatccatcagaggtgggcgactaatccggctcgtgtgtagaggtatgcgcactggtcaagc 18262694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 20590108 - 20590030
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||| |||| |||||||||| || ||||  || ||| |||||| |||||||||||||||| ||||| |||||| |||||    
T  20590108 gcttccgcaccggtttccgatcctccaatagtggacaactaatacggctcatgcgtagagtcatgcgcactggccaagc 20590030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 24499091 - 24499013
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |  ||||| ||||||||||| | ||| | ||||||||||| | ||||||||||||| ||||| ||||||    
T  24499091 gctttcgcaccaatttccaacccaccaaagatggactattaatccggctcgtacgtagaggcatgcgcactgatcaagc 24499013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 32874884 - 32874818
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||| ||| ||||| |||| |||||| |||||| ||| |||| |||| |||||||    
T  32874884 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactagtcaagc 32874818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 35561829 - 35561891
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtca 129  Q
    ||||||||| ||||| |||   ||||||||| |||||||| |||||||||||| |||||||||    
T  35561829 tttccgacctaccaacggtgagcgactaatctggctcatgtgtagaggcatgcgcactggtca 35561891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 118
Target Start/End: Original strand, 7308397 - 7308426
Alignment:
Q  89 cgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||||||||||||||||||||||||    
T  7308397 cgactaatccggctcatgcgtagaggcatg 7308426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 40773382 - 40773317
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||| ||||||||||| |||||||| |  |||||||||||| ||| |  ||||||||||||    
T  40773382 gctttcgcaccggtttccgacgcaccaaagatgaacgactaatccgactcgtatgtagaggcatgc 40773317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 40060391 - 40060339
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcg 108  Q
    ||||||| |||||||| ||||| ||| ||| ||||| ||||||||||||||||    
T  40060391 tttcgcaccggtttccaacccatcaatggtggacgattaatccggctcatgcg 40060339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 19089610 - 19089533
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  19089610 gctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaag 19089533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 14783418 - 14783488
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  14783418 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacact 14783488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 6606095 - 6606172
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||| ||||    
T  6606095 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaag 6606172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 8611972 - 8612050
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||| |||||||||||||| | |||||||||||| ||||||||||| |||||||||||||||||||    
T  8611972 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagc 8612050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 9633623 - 9633701
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||| |||||    
T  9633623 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagc 9633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 21898760 - 21898682
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||||| |||||    
T  21898760 gctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagc 21898682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 5253221 - 5253298
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||| ||||    
T  5253221 gctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaag 5253298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 3601196 - 3601118
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| || ||| |||||||| |||||| |||||    
T  3601196 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagc 3601118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 13036002 - 13036079
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| ||||||||||||||||||  || ||||||||||| ||||||||||||||||||||| |||||| ||||    
T  13036002 gctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaag 13036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 8938822 - 8938746
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||| |||||||||||||| ||||||| |||||||||| ||||||||||||||| || ||| |||||||||||    
T  8938822 ctttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaag 8938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 30788851 - 30788923
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| ||| ||||||||||| ||||||    
T  30788851 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactgg 30788923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 29444775 - 29444841
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||||||| |||||| |||||    
T  29444775 gtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagc 29444841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 30410557 - 30410484
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggt 127  Q
    |||||||||||||||||||||||||||||| |   ||| |||||| |||||||||||||||||||| |||||||    
T  30410557 gctttcgcatcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcactggt 30410484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 9179747 - 9179811
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||| ||||||||||    
T  9179747 tttccgatccaccaaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaag 9179811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 34954617 - 34954677
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagagg 114  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  34954617 gctttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagagg 34954677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 29333138 - 29333209
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||| ||||| |||||| ||||||||| ||||||| || |||||||||||||||||||||| ||||||    
T  29333138 ctttcgcaccggttaccgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcactgg 29333209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 3587943 - 3588021
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||| |||||||| ||| ||||||| |||||||||||||| ||||||||||||| |||  |||||| |||||    
T  3587943 gctttcgcatcagtttccgatccatcaaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaagc 3588021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 8149797 - 8149859
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||| |||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||    
T  8149797 tttcgcaccggtttccaacccaccaaaggtggacgactaattcggctaatgcgtagaggcatg 8149859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 8932773 - 8932703
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| |||||||||||||| ||||||| |  || ||||||||||||||||||||||||||| ||||    
T  8932773 gctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcact 8932703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 8944239 - 8944169
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| |||||||||||||| ||||||| |  || ||||||||||||||||||||||||||| ||||    
T  8944239 gctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcact 8944169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 11142713 - 11142639
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||| |||| ||||||||||||||| | ||| ||||||| | ||||||||||||||||||| ||||||||||    
T  11142713 tttcgcaccggtctccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaa 11142639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 14107356 - 14107434
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||||||||| ||   | | ||||||||||||||||||||||||||||||  ||||||||||||    
T  14107356 gctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagc 14107434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 31129289 - 31129219
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| ||||||||||| ||||||||||  || ||||||| ||||||||||||||||||||| ||||    
T  31129289 gctttcgcaccggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcact 31129219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 12606542 - 12606470
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| ||||||||  | |||||||||| | ||||||||||||||| ||||||||||||||| ||||||    
T  12606542 gctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactgg 12606470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 12635926 - 12635856
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| ||||||||||||||||||  || | ||||||||||||||  ||||||||||||||| ||||    
T  12635926 gctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcact 12635856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 2271312 - 2271373
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||| |||||| ||||||| ||||||||||||||||| ||||||||| ||||| ||||||    
T  2271312 ggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactgg 2271373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 13584444 - 13584497
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgc 107  Q
    ||||||||  |||||||||||||||||||||| ||||| |||||||||||||||    
T  13584444 gctttcgcgccggtttccgacccaccaaaggtggacgattaatccggctcatgc 13584497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 8888993 - 8888922
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||||| ||||| ||| ||| ||||||| ||||||||||||| |||||||||||||| |||| ||||||    
T  8888993 gctttcgcat-ggttttcgatccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactgg 8888922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 13469045 - 13468981
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| |||||||| ||||||||| ||| | ||||||||| ||||| ||||||||||||||    
T  13469045 gctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatg 13468981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 14326109 - 14326045
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||| ||| || ||||||||||||||||| |   ||||||||||||||||||||||||||||||    
T  14326109 gcttttgcaccgttttccgacccaccaaagatgagcgactaatccggctcatgcgtagaggcatg 14326045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 14419119 - 14419055
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||| ||| || ||||||||||||||||| |   ||||||||||||||||||||||||||||||    
T  14419119 gcttttgcaccgttttccgacccaccaaagatgagcgactaatccggctcatgcgtagaggcatg 14419055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 24671877 - 24671941
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| ||| ||||||  ||| ||||||||||||  |||||||||||||||||||||||||||    
T  24671877 tttccgaaccatcaaaggcggactactaatccggcttgtgcgtagaggcatgcacactggtcaag 24671941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 5029929 - 5029858
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| | |||||||||||| ||||| | | ||||||||||  ||||||||||||||||||| |||||    
T  5029929 gctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactg 5029858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 17114908 - 17114959
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| | ||||||| | ||||||||||||||||||||||||||||||    
T  17114908 tttccgacctatcaaaggtgggcgactaatccggctcatgcgtagaggcatg 17114959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 32157175 - 32157242
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| || ||||||||| | || |||||||| |||||||||||||||| |||| |||||||||||    
T  32157175 cggtttctgatccaccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactggtcaag 32157242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 21167487 - 21167417
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| |||||| | ||||| ||| ||| ||||| |||||||||||||||||| | |||||||||||    
T  21167487 gctttcgcaccggttttcaacccatcaatggtggacgattaatccggctcatgcgtaaatgcatgcacact 21167417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 9366423 - 9366499
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||   ||| ||||||||| | || |||||||||||| ||||||||||||||| |||||| |||||    
T  9366423 ctttcgcatcggtttttaacctaccaaaggtgg-cgtctaatccggctcgtgcgtagaggcatgcgcactggccaagc 9366499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 9147379 - 9147336
Alignment:
Q  88 acgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||||| |||||||||||||||  |||||||||||    
T  9147379 acgactaatccggcttatgcgtagaggcatgtgcactggtcaag 9147336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 32048550 - 32048511
Alignment:
Q  57 ttcgcatcggtttccgacccaccaaaggtagacgactaat 96  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  32048550 ttcgcatcggtttccgacccatcaaaggttgacgactaat 32048511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 374983 - 375044
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||| ||||||| ||||| |||| |||||||||  ||||||| ||||||||||| ||||||    
T  374983 ggttttcgacccatcaaagatagatgactaatccaactcatgcatagaggcatgcgcactgg 375044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 13391363 - 13391326
Alignment:
Q  89 cgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  13391363 cgactaatccggctcgtgcgtagaggcatgcgcactgg 13391326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 19230591 - 19230628
Alignment:
Q  88 acgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  19230591 acgactaatccggctcgtgcgtagaggcatgcatactg 19230628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 15643842 - 15643890
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaga 112  Q
    |||||| |||||||| |||||| | ||||||||||| ||||||||||||    
T  15643842 cggttttcgacccactaaaggtgggcgactaatccgactcatgcgtaga 15643890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 6032643 - 6032719
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  6032643 tttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactggtcaagc 6032719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 7246645 - 7246722
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||| |||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagc 7246722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 40780861 - 40780930
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactg 40780930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 38075546 - 38075468
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||||||||||||||||||| ||| | |||| |||||||||||||||||||||| |||||| |||||    
T  38075546 gctttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagc 38075468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 29895899 - 29895823
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||| |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaag 29895823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 16450413 - 16450335
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||  |||||| |||||    
T  16450413 gctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagc 16450335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 38166140 - 38166062
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||| |||||| |||||    
T  38166140 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagc 38166062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 52950195 - 52950117
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||||| ||||| |||||| |||||    
T  52950195 gctttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagc 52950117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 2559419 - 2559342
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||| |||||| |||||    
T  2559419 ctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagc 2559342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 8889125 - 8889064
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||    
T  8889125 cggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactg 8889064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 42722576 - 42722653
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||| |||||||| ||||||  |||||||||||||||||||||||||||||||| |||||| |||||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagc 42722653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 4738731 - 4738659
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| |||||||||||||||||||||| |||||||||| | |||||||||||||| ||||| ||||||    
T  4738731 gctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactgg 4738659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 6779324 - 6779252
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  6779324 gctttcgcatcgggttccgattcaccaaaggtggacgactaatccggctcatgcatagaggcatgcgcactgg 6779252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 5472846 - 5472924
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| | |||| ||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||| |||||    
T  5472846 gctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagc 5472924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 13073649 - 13073579
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||| ||||||||||||||||||||||| |||||||||| || ||||||||||||| |||| ||||||    
T  13073649 tttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactgg 13073579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 16645231 - 16645153
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||||||||||| |||| | ||||||||| | |||||| ||||||||||||||||||| |||||    
T  16645231 gctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagc 16645153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 36145213 - 36145291
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||||  || ||||||| |||||||||||||||||||| |||||||||||| ||||| ||||||    
T  36145213 gctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagc 36145291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 49260663 - 49260741
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| ||| || ||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||| |||||    
T  49260663 gcttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagc 49260741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 43458725 - 43458648
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| ||||||||||| || ||||||| ||||||||||||||||| | ||||||||||||| |||||| |||||    
T  43458725 ctttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagc 43458648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 31588798 - 31588722
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||||||||| |||||||| ||   ||||||||||||||||||||||||| ||||| |||||| ||||    
T  31588798 ctttcgcatcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactggccaag 31588722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 38168369 - 38168305
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| |||||||| |||||| ||||||  |||||||||||||||||||||||||||||||    
T  38168369 gctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatg 38168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 46108798 - 46108734
Alignment:
Q  60 gcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    |||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||| ||||    
T  46108798 gcatcggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcact 46108734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 48834698 - 48834762
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||  ||||||||||    
T  48834698 gctttcgcaccggtttccgacccaccaaaggtaggcgactaatccgactcatgtatagaggcatg 48834762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 53599173 - 53599101
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| |||||||||| |||| ||||||  |||| ||||||||||||||||||||||||||| ||||||    
T  53599173 gctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactgg 53599101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 55921147 - 55921076
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| ||||||||||||||||||||||   ||| ||||||||||||| ||||||||||||| |||||    
T  55921147 gctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactg 55921076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 17080156 - 17080078
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||| ||| ||| |||||||   ||||||||||||||||||||||||||||||| |||||| |||||    
T  17080156 gctttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagc 17080078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 29588849 - 29588779
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    |||||||||||| ||||||||||||||| ||| ||  ||||||||||||| ||||||||||||||| ||||    
T  29588849 gctttcgcatcgatttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcact 29588779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 30317345 - 30317283
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcat 117  Q
    ||||| ||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||    
T  30317345 ctttcacatcggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcat 30317283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 36262765 - 36262843
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||| |||||| |||||||||||||| | ||||||||||| ||| ||||||||||||||  |||||| |||||    
T  36262765 gctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagc 36262843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 1940779 - 1940840
Alignment:
Q  58 tcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||| |||||| ||||||||||||||| | ||||||||||||||| |||||||||||||||    
T  1940779 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgc 1940840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 20532420 - 20532485
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| ||||||||||| | ||||| ||||||||||||||||||||||||| |||||| |||||    
T  20532420 tttccgatccaccaaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagc 20532485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Complemental strand, 21429411 - 21429342
Alignment:
Q  57 ttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||| |||||||||||||||||||||| |||||||| || | ||| ||||||||||||||| ||||||    
T  21429411 ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactgg 21429342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 24850625 - 24850702
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||||||||||||| |||  || ||| || || |||||| |||||||||||||||||||| |||||||||||    
T  24850625 gctttcgcatcggtttccgatccaataatggtggatgaataatccagctcatgcgtagaggcatgcgcactggtcaag 24850702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 50486056 - 50485991
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||| ||||||||||||||||||| || ||| | ||||||||||||||| |||||||||||||||    
T  50486056 gcttttgcatcggtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgc 50485991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 8064829 - 8064873
Alignment:
Q  87 gacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  8064829 gacgactaatccggctcatgcgtagaggcatgcgcactggtcaag 8064873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 47682380 - 47682444
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| |||||||||||||||||||||| | ||||||| ||||||| ||||||||| ||||    
T  47682380 gctttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatg 47682444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 14567351 - 14567280
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||| || ||||||||||||||||||    ||||||||||||||| ||||||||||||||| ||||||    
T  14567351 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactgg 14567280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 38841366 - 38841433
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcac 121  Q
    |||||||||||| ||||||| | ||||||| | ||||||||||||| ||||||||||||| |||||||    
T  38841366 gctttcgcatcgatttccgaactaccaaagatggacgactaatccgactcatgcgtagagacatgcac 38841433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 54946352 - 54946297
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||||||||||    
T  54946352 cggtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgc 54946297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 3159467 - 3159545
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| ||| |||||||||||||||||| |||   ||||||||| ||||| ||||||||||||||| |||||| |||||    
T  3159467 gcttttgcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagc 3159545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 10541128 - 10541051
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||| ||| ||||||| | ||| ||||| ||||| |||||||||||||||||||||| |||||    
T  10541128 gctttcgcaccggtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagc 10541051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 20128422 - 20128344
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||| |||||||||| ||| |||||||||||  |||| |||||| |||||||| |||||| |||||    
T  20128422 gctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagc 20128344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 47078571 - 47078493
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||  ||||||||||||||||| |||   ||||||||||||||| ||||||||||||||  |||||| |||||    
T  47078571 gctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagc 47078493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 1446906 - 1446862
Alignment:
Q  87 gacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||    
T  1446906 gacgactaatccggctcatgcgtagaggcatgcgcactggccaag 1446862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 15829811 - 15829735
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||| ||||||| || ||||||| ||| || |||||||||||||||||| |||| |||||| |||||| ||||    
T  15829811 ctttcgcaccggtttctgatccaccaatggtggaggactaatccggctcatgcctagaagcatgcgcactggccaag 15829735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 24166563 - 24166491
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| |||||||||| ||| ||||||| |  |||||||| ||||| ||||||||||||||| ||||||    
T  24166563 gctttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactgg 24166491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 42722378 - 42722454
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||| || ||| ||||||||||  ||| ||||||||||||| ||||||| |||||| |||| |||||||||||    
T  42722378 ctttcgcaccgattttcgacccaccattggtggacgactaatccgactcatgcatagaggtatgcgcactggtcaag 42722454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 14124128 - 14124057
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||| |||||||| ||||||||| |||   ||||||||||||||| || |||||||||||| ||||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactgg 14124057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 37369041 - 37369112
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||||||||||||||  ||||||  || | ||||| ||||| ||| ||||||||||||||||||||||    
T  37369041 ctttcgcatcggtttccgattcaccaatagtgggcgacttatccgactcgtgcgtagaggcatgcacactgg 37369112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 40272340 - 40272407
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||||||||| |||  ||||| |||||| || |||||||||||||||| |||||| |||||    
T  40272340 ggtttccgacccaccaatggtgaacgacaaatccgacttatgcgtagaggcatgcgcactggccaagc 40272407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 49952144 - 49952215
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggt-agacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||| |||||||| ||||| ||||||| |  ||||||||||||||||||||||||||| ||| |||||    
T  49952144 ctttcgcaccggtttccaacccatcaaaggtgacgcgactaatccggctcatgcgtagaggcgtgcgcactg 49952215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 3507371 - 3507321
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggca 116  Q
    |||||||| ||||||||||| ||||||||||||||||| || |||||||||    
T  3507371 gtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggca 3507321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 12703543 - 12703621
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||| ||||||||||||| ||   |||| | | |||||||||||||| |||||||||| ||| ||||||||||||||    
T  12703543 gctttcacatcggtttccgatcctttaaagatgggcgactaatccggcttatgcgtagagacatacacactggtcaagc 12703621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 14858823 - 14858745
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||| |||||| ||||||| ||||| ||||| | ||| | ||||||| ||||| ||||||||||||    
T  14858823 gctttcgcaccggtttctgacccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactggtcaagc 14858745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 20421875 - 20421809
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||| ||| | | ||||| ||||| ||||||||||||||||||||| |||||| ||||    
T  20421875 ggtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactggccaag 20421809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 43468459 - 43468401
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagag 113  Q
    |||||||| |||| ||||||||||||  ||| | |||||||||||||||||||||||||    
T  43468459 ctttcgcaccggtctccgacccaccactggtgggcgactaatccggctcatgcgtagag 43468401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 295534 - 295603
Alignment:
Q  57 ttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||| |||||||  ||||||||| ||| ||||||||||| || || ||||||||||||||| ||||||    
T  295534 ttcgcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactgg 295603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 15839968 - 15840005
Alignment:
Q  89 cgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  15839968 cgactaatccggctcatgcgtagaggcatgcgcactgg 15840005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 17946602 - 17946525
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||| |||| ||||||| || ||| ||||||| | |||||| ||||| |||||| |||||||||||    
T  17946602 gctttcgcaacggttttcgactcaccaaaagtggacaactaatctgactcatgtgtagaagcatgcgcactggtcaag 17946525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 14597898 - 14597970
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||| ||| |||||| ||| ||| ||||||| |||||||||||| | || ||||||||||||||| ||||||    
T  14597898 gcttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactgg 14597970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 21192753 - 21192681
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| |||||| |||| ||||||| || | ||| ||||||| ||| ||||||||||||||| ||||||    
T  21192753 gctttcgcaccggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactgg 21192681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 33647832 - 33647756
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| |||||||||| ||||||||| |  |||||||||| || || |||||||||| |||  ||||||||||||    
T  33647832 tttcgcaccggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagc 33647756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 35359849 - 35359773
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||||| |||||||||||||||| |  || | ||||||||||  || |||||| ||||||||| ||||||||||    
T  35359849 gctttcgcaccggtttccgacccacctatagtgggcgactaatccaacttatgcgttgaggcatgcgcactggtcaa 35359773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 48317284 - 48317344
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||| ||||| ||| ||| | ||||||||||||||| ||||||||||||| |||||||    
T  48317284 ggtttccaacccatcaacggtgggcgactaatccggctcgtgcgtagaggcatacacactg 48317344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 18531632 - 18531561
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| ||||||||||||||| |||||| ||||| ||||| || || ||| | ||||||||| |||||    
T  18531632 gctttcgcaccggtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactg 18531561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 25406561 - 25406620
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagag 113  Q
    ||||||||| |||||||||||||| |||||||  |||||||||| |  ||||||||||||    
T  25406561 gctttcgcaccggtttccgacccatcaaaggtgaacgactaatctgattcatgcgtagag 25406620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 4986306 - 4986236
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| | ||||| |||||| ||||||||||||||||||||| ||| ||| || |||| ||| ||||    
T  4986306 gctttcgcaccagtttctgacccatcaaaggtagacgactaatccgtctcgtgcataaaggcgtgcgcact 4986236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 26237422 - 26237476
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgta 110  Q
    ||||||||| |||||||||||| ||| ||| ||| ||||||||| ||||||||||    
T  26237422 tttcgcatcagtttccgacccatcaatggtggactactaatccgactcatgcgta 26237476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 27531668 - 27531722
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcg 108  Q
    |||||| || ||| |||||||||||||||||| |||||||| |||| ||||||||    
T  27531668 gctttcacaccggcttccgacccaccaaaggtggacgactattccgactcatgcg 27531722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 48015071 - 48015149
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||| ||| ||||  | | | ||||||||||||| ||||||||||| ||| |||||| |||||    
T  48015071 gctttcgcaccggtttccgatccatcaaaattgggctactaatccggctcgtgcgtagaggcttgcgcactggccaagc 48015149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 53354638 - 53354572
Alignment:
Q  61 catcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggt 127  Q
    ||||| ||||||||||| ||||| |  ||||||||||||  | |||||||||||||||| |||||||    
T  53354638 catcgatttccgacccatcaaagatgaacgactaatccgatttatgcgtagaggcatgcgcactggt 53354572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 20354717 - 20354680
Alignment:
Q  87 gacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  20354717 gacgactaatccgactcatgcgtagaggcatgcgcact 20354680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 27248527 - 27248474
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||| |||| ||||||||| | ||||||||| ||||| |||||||||||||||    
T  27248527 gtttctgacctaccaaaggtgggcgactaatctggctcctgcgtagaggcatgc 27248474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 45721198 - 45721137
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggca 116  Q
    |||||||| |||||||| |||||  |||||| ||||||||||||| ||  ||||||||||||    
T  45721198 ctttcgcaccggtttccaacccattaaaggtggacgactaatccgacttgtgcgtagaggca 45721137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 4736698 - 4736642
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcaca 122  Q
    |||||||||||||||| ||| | |||||||| |||||  | ||||||||||||||||    
T  4736698 gtttccgacccaccaacggtgggcgactaattcggcttgtacgtagaggcatgcaca 4736642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 25103783 - 25103823
Alignment:
Q  90 gactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    |||||||||  ||||||||||||||||||| ||||||||||    
T  25103783 gactaatccaactcatgcgtagaggcatgcgcactggtcaa 25103823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 14169608 - 14169684
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  14169608 ctttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaag 14169684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 25540402 - 25540480
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||    
T  25540402 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagc 25540480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 16325703 - 16325626
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  16325703 gctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaag 16325626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 7747382 - 7747310
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||    
T  7747382 gctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactgg 7747310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 3643885 - 3643963
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||| |||||    
T  3643885 gctttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagc 3643963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 39201516 - 39201578
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  39201516 cggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactgg 39201578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 22593241 - 22593170
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  22593241 gctttcgcaccggtt-ccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 22593170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 10823168 - 10823090
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||||||||| |||||| | ||||||||||||||| ||||||||||||||| |||||| |||||    
T  10823168 gctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagc 10823090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 41220743 - 41220665
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||||||||| ||||||  ||||||||| |||||||||||||||||||||| |||||| |||||    
T  41220743 gctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagc 41220665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 3811689 - 3811754
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||||||||||| |||||||||||||| | ||| |||||||||||||||||||||||||||    
T  3811689 gctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgc 3811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 20116610 - 20116675
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  20116610 gctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgc 20116675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 35946845 - 35946768
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| | |||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||| ||| |||||    
T  35946845 ctttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagc 35946768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 38962870 - 38962793
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| | ||||| |||||||||||||| |||||||||||||| |||||||||||||||||| |||||| |||||    
T  38962870 ctttcgcaccagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagc 38962793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 41031904 - 41031981
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||  ||||||||||||||||||||| |  |||||||||||||| |||||||||||||||||||||| ||||    
T  41031904 gctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaag 41031981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 6358150 - 6358226
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||| || |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  6358150 ctttcacaccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaag 6358226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 10026626 - 10026686
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactgg 10026686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 10046487 - 10046546
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactg 10046546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 12864331 - 12864261
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||| |||||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| |||||    
T  12864331 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactg 12864261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 18902528 - 18902606
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||||||||||||| | ||||||||| ||||| ||||||||| || || ||||||||||||    
T  18902528 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagc 18902606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 38005510 - 38005432
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| | |||||||| ||||||||||| | |||||||||||||||||| |||||||||||| |||||| |||||    
T  38005510 gctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagc 38005432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 42770649 - 42770727
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| |||||||||| ||||||||||||||| ||||| ||||||||||| |||| |||||||||| |||||| |||||    
T  42770649 gcttttgcatcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagc 42770727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 8410239 - 8410162
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| ||||||||||||| ||||| || | ||||||||||||||| ||||||||||||||| |||||| ||||    
T  8410239 gctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaag 8410162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 34346285 - 34346362
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| ||||||||||||||||||||||   ||| ||||| | |||||||||||||||||||||||||| ||||    
T  34346285 gctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaag 34346362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 11069986 - 11069914
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||||||||||||||||||||||| ||| |||||||||| | |||| |||||||||| |||| ||||||    
T  11069986 gctttcgcatcggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactgg 11069914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 12455418 - 12455346
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| |||||||||||||||||| |||   ||||||||||||||| ||||||||||||||| ||||||    
T  12455418 gctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactgg 12455346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 20612534 - 20612610
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaat-ccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| |||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||| |||||| ||||    
T  20612534 tttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaag 20612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 331598 - 331532
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||| |||||| |||||| ||||    
T  331598 ggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaag 331532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 44139592 - 44139514
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||||||||  ||| | ||||||||||||||| |||||||||||| || |||||| |||||    
T  44139592 gctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagc 44139514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 44945701 - 44945631
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| |||||||||| |||| |||||| | ||||||||||||||| ||||||||||||||| ||||    
T  44945701 gctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcact 44945631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 13026409 - 13026481
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||| ||||||||||| |||| |||||| || |  |||||||||||||||||||||||||||||| ||||||    
T  13026409 gcttttgcatcggtttctgacctaccaaaagtggctgactaatccggctcatgcgtagaggcatgcgcactgg 13026481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 26805404 - 26805340
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||| |||||||||| ||| ||||||||||| | ||||||||||| ||||||||||||||||||    
T  26805404 gcttttgcatcggttttcgagccaccaaaggtgggcgactaatccgactcatgcgtagaggcatg 26805340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 33005858 - 33005782
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||||||||||||||||| ||||||   ||| ||||| | ||||||||||||||||||| |||||| ||||    
T  33005858 ctttcgcatcggtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcactggccaag 33005782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 2550975 - 2550904
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||| |||||| | |||||||||| || | ||||||||||||||||||||||||| ||||| ||||||    
T  2550975 ctttcgcaccggttttcaacccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactgg 2550904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 9360747 - 9360818
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||| ||||||||| ||||| |||||| | |||||||| |||||| ||||||||||||||| ||||||    
T  9360747 ctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactgg 9360818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 37560281 - 37560210
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||| || |||||| ||||||| ||||||| ||||| ||||||||||| ||||||||||||||| |||||    
T  37560281 gctttcacaccggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactg 37560210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 44773370 - 44773299
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||| |||||||||||||| |||||||   |||||||||||||||| ||  |||||||||||||||||    
T  44773370 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcacgcacagaggcatgcacactgg 44773299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 5035396 - 5035318
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||| |||||||||||||  |||||| || || |||||||| || ||||||||| ||||| ||||||||||||    
T  5035396 gctttcgcatgggtttccgacccattaaaggtggatgattaatccggttcgtgcgtagagacatgcgcactggtcaagc 5035318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 18649025 - 18649095
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||| |||||||| |||||||||| ||   ||||||||||| ||||||||||||||||||| |||||    
T  18649025 ctttcgcaacggtttccaacccaccaaaagtgagcgactaatccgactcatgcgtagaggcatgcgcactg 18649095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 16035044 - 16034967
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| ||||||||||| || ||| |||   ||||||||||||||| | |||| |||||||||||||||||||||    
T  16035044 ctttcgcaccggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagc 16034967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 24179657 - 24179612
Alignment:
Q  73 acccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||    
T  24179657 acccaccaaagatggacgactaatccggctcatgcgtagaggcatg 24179612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 27726047 - 27725970
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| || |||||||||||||||||  ||| | ||||||||||||||  ||||||||||||||| |||||| |||||    
T  27726047 ctttcacaccggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagc 27725970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 28525465 - 28525530
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||  |||||| || |||||||||||||| ||||||||||||||| |||||| ||||    
T  28525465 gtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaag 28525530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 10669690 - 10669622
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||||||||||||||  |||| ||||||| ||| ||||||||| ||||| |||||| |||||    
T  10669690 cggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagc 10669622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 34130300 - 34130364
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| || ||||||| | ||||| ||||||||||||||| ||||||||||||||| ||||    
T  34130300 gctttcgcaccgatttccgatctaccaatggtagacgactaatctggctcatgcgtagagacatg 34130364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 20963114 - 20963185
Alignment:
Q  60 gcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||| ||||||| ||||||| | ||||||||| | ||||| |||||||||||| ||| ||||||||    
T  20963114 gcatcggttttcgacccatcaaaggtgggcgactaatctgcctcatacgtagaggcatgtacattggtcaag 20963185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 21642056 - 21641993
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||| |||||| ||||||||||||||  | ||| |||| ||||||||||||||||||||||    
T  21642056 tttcgcaccggttttcgacccaccaaaggcgggcgattaattcggctcatgcgtagaggcatgc 21641993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 28616377 - 28616448
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| ||||||| ||||||| |||| | | ||||||||| ||||| ||||||||||||||| |||||    
T  28616377 gctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactg 28616448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 29421390 - 29421319
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||  ||||||||| | |||||| ||||||||||| | || ||||||||||||||||||| |||||    
T  29421390 gctttcgcactggtttccgatctaccaaatgtagacgactacttcgactcatgcgtagaggcatgctcactg 29421319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 41187922 - 41187879
Alignment:
Q  89 cgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||    
T  41187922 cgactaatccgtctcatgcgtagaggcatgcgcactggtcaagc 41187879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 13104835 - 13104901
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||| ||||| | ||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  13104835 gttttcgacctatcaaaggtagacgactaatttagctcatgcgtagaggcatgcgcactggccaagc 13104901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 792261 - 792208
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcg 108  Q
    |||| ||| |||||||||||||||||||| | | ||||||||||||||||||||    
T  792261 cttttgcaccggtttccgacccaccaaagatgggcgactaatccggctcatgcg 792208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 2785038 - 2784969
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||| ||||||||||| || ||| | | ||||||||||| | ||||||||||||||||||| |||||    
T  2785038 tttcgcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactg 2784969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 15234059 - 15234136
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||||||||||||||| | ||||| |  ||||||||||   ||  ||||||||||||||| |||||||||||    
T  15234059 gctttcgcatcggtttccgacctatcaaagatgaacgactaatctaacttgtgcgtagaggcatgcgcactggtcaag 15234136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 29422323 - 29422258
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||| || ||||||| ||| ||||||| ||||||||||||||||| |||||| ||| ||||    
T  29422323 gctttcgcaccgatttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgc 29422258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 1773644 - 1773700
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaga 112  Q
    ||||||| |||||| ||||||||||| ||| ||||||||||||  ||||||||||||    
T  1773644 tttcgcaccggttttcgacccaccaatggtggacgactaatccaactcatgcgtaga 1773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 34722788 - 34722724
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| ||||||| || ||| ||||||| | ||||||||||||||| ||||||||| ||||    
T  34722788 gctttcgcaccggtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatg 34722724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 36480438 - 36480505
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||| || ||| ||||||| ||||||| |||||||   ||||||||||||||||||||||| ||||||    
T  36480438 tttcgcaccgattttcgacccatcaaaggtggacgact---ccggctcatgcgtagaggcatgcgcactgg 36480505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 44023403 - 44023347
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgta 110  Q
    ||||||||| |||||||| ||||||||||| | |||||||||| || ||||||||||    
T  44023403 gctttcgcaccggtttccaacccaccaaagatggacgactaattcgactcatgcgta 44023347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 2528339 - 2528410
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| | ||||||||| ||| |||| |   |||||||||||||| ||| ||||||||||||||||||    
T  2528339 gctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgcacactg 2528410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 7787154 - 7787099
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    |||||| ||| ||||||||| | | ||||||||||||||| |||||||||||||||    
T  7787154 cggttttcgatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgc 7787099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 16813176 - 16813239
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||| ||| ||||||| | ||||||||||||||||| ||| |||||||||||  |||||||||    
T  16813176 tttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaa 16813239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 16852455 - 16852518
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||| ||| ||||||| | ||||||||||||||||| ||| |||||||||||  |||||||||    
T  16852455 tttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaa 16852518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 34356302 - 34356243
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||||| ||| |||  |||| ||||||||||||||| ||||||||||| |||||    
T  34356302 gtttccgacccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactg 34356243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 34738331 - 34738394
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcat 117  Q
    ||||| ||| |||||||||||| ||||  ||| ||||||||||||| ||| |||||||||||||    
T  34738331 gcttttgcaccggtttccgacctaccattggtggacgactaatccgactcgtgcgtagaggcat 34738394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 35443870 - 35443925
Alignment:
Q  61 catcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggca 116  Q
    ||||||||||||| ||| |||   | ||||||||||||||||||||||||||||||    
T  35443870 catcggtttccgatccatcaataatggacgactaatccggctcatgcgtagaggca 35443925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 39806884 - 39806955
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||| ||||||  || ||||||||||| || |||||||||| ||| || |||||||||||| ||||||    
T  39806884 ctttcgcaccggtttatgaaccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactgg 39806955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 21286516 - 21286474
Alignment:
Q  90 gactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||| ||||||||||||||| ||||||||||||    
T  21286516 gactaatccagctcgtgcgtagaggcatgcgcactggtcaagc 21286474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 45263665 - 45263743
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| |||| | ||| ||||||||||||| |   ||| ||||||||||| ||||||||||||||| |||||| |||||    
T  45263665 gcttttgcattgtttttcgacccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagc 45263743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 33634448 - 33634509
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||| ||| |||||||||||||| ||||||| |||||| |||| || ||||||| ||||||    
T  33634448 ggttttcgatccaccaaaggtagatgactaattcggctcgtgcgcagcggcatgcgcactgg 33634509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 15079561 - 15079513
Alignment:
Q  84 gtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||| ||||||||  ||||| ||||||||| ||||||||||||||||||    
T  15079561 gtaggcgactaatttggctcgtgcgtagagtcatgcacactggtcaagc 15079513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 21099079 - 21099003
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||||||| ||||||| || ||||| |||  |||||| ||| |  ||||||||||||| ||| |||||||    
T  21099079 tttcgcatcggtttctgacccactaatggtaggcgatcaatccgcctcgtatgtagaggcatgcatactagtcaagc 21099003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 25549836 - 25549772
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||| ||| || ||| ||| ||| ||||| | ||||||||||||||||| ||||||||||||||    
T  25549836 gcttttgcaccgatttacgatccatcaaagatggacgactaatccggctcgtgcgtagaggcatg 25549772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 44548722 - 44548774
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatg 106  Q
    ||||||||| | |||||||| ||| ||||||| ||||||||||| ||||||||    
T  44548722 gctttcgcaccagtttccgatccatcaaaggtggacgactaatctggctcatg 44548774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 29128027 - 29127956
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||    
T  29128027 gctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactg 29127956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 49021202 - 49021274
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  49021202 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 28572210 - 28572288
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||| ||||| |||||    
T  28572210 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagc 28572288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 47219252 - 47219182
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  47219252 gctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcact 47219182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 47471938 - 47471869
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||||    
T  47471938 ctttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcact 47471869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 54261333 - 54261256
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||||| |||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagc 54261256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 15320294 - 15320222
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| ||||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  15320294 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactgg 15320222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 35316063 - 35315987
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||||||||||||||||||||| || | |||||||||| |||||||||||||||||||| |||||| ||||    
T  35316063 ctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaag 35315987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 3136693 - 3136764
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  3136693 gctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactg 3136764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 7310702 - 7310771
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacac 123  Q
    |||||||||||||||||||||||||||||| |   ||||||||||||||| |||||||||||||||||||    
T  7310702 gctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacac 7310771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 25295068 - 25294991
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||| ||||    
T  25295068 gctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaag 25294991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 30767258 - 30767323
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||| ||||    
T  30767258 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaag 30767323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 47749104 - 47749181
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||||||||||||||| ||||||||| | |||||||| |||||| ||||||||||||||| |||||| ||||    
T  47749104 gctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaag 47749181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 23511675 - 23511599
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||||| |||||| ||||||| ||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||    
T  23511675 gctttcgcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaa 23511599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 29762155 - 29762231
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||| |||||||||||||||||| ||| |||||||||||| |||||||| ||||||||||| |||||| ||||    
T  29762155 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaag 29762231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 3507534 - 3507609
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| ||||||||||||||||||||||   ||||||||||||||| ||||||||||||||| |||||| ||||    
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaag 3507609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 49198457 - 49198382
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||| |||||||||| || ||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  49198457 tttcacatcggtttctgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaag 49198382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 51060280 - 51060351
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||| | |||||||||||||||||| |||||    
T  51060280 gctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactg 51060351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 3755655 - 3755602
Alignment:
Q  77 accaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  3755655 accaaaggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaa 3755602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 7328951 - 7328875
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||| ||||||||||||||| | |||||||||||||||||||||| |||||||| |||||| ||||    
T  7328951 gctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaag 7328875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 19147068 - 19146991
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||||||||||||||||||| |||||||||||| |||| ||| |||||| || |||||||| |||||    
T  19147068 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagc 19146991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 29136021 - 29135944
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| | |||||||| ||||||||| ||| || |||||||||||||||||||||||||||||| |||||| ||||    
T  29136021 gctttcgtaccggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaag 29135944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 43330731 - 43330808
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| | ||||||  |||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||||||    
T  43330731 gctttcgtaccggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaag 43330808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 45402350 - 45402415
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    |||| |||||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  45402350 gcttgcgcatcagtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgc 45402415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 33251758 - 33251698
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||| ||||||| |||| || ||||||||||||||||||||||||||||||||||||||||    
T  33251758 gttttcgacccatcaaatgtggacgactaatccggctcatgcgtagaggcatgcacactgg 33251698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 45877561 - 45877485
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||| |||||||||||||| ||| |||  |||||||||||||||||||||||||||||||  |||||| ||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaag 45877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 50405612 - 50405680
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||||| ||| | ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  50405612 cggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagc 50405680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 52364813 - 52364877
Alignment:
Q  68 ttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||| ||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||    
T  52364813 ttccgacccatcaaaggtagacgattaatccagctcgtgcgtagaggcatgcgcactggtcaagc 52364877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 4638259 - 4638184
Alignment:
Q  57 ttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||||||||  |||||| | | ||||||||||||| |||||||||| |||| ||||||||||||    
T  4638259 ttcgcatcggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagc 4638184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 26361966 - 26362037
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||| || |||||||||||||| |||||||   ||||||||||||||| |||||||||||||||||||||    
T  26361966 gctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactg 26362037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 54237556 - 54237485
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| ||||||||||||||| || ||| ||||||| ||||||||||||||||||| ||||| |||||    
T  54237556 gctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactg 54237485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 13367531 - 13367461
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||| |||||||| ||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||    
T  13367531 ctttcgcaccggtttcctacccaacaacggtaggtgactaatccggctcatgcgtaaaggcatgcacactg 13367461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 26207804 - 26207878
Alignment:
Q  58 tcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| ||||||||||||||| ||   | | |||||||||||||||||||||||||||||||||||||| |||||    
T  26207804 tcgcaccggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagc 26207878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 41630523 - 41630589
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||| ||||||||| | |||||||||||||||||| |||||||||||| |||||| |||||    
T  41630523 gtttccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagc 41630589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 928708 - 928631
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| || ||| |||| |||||||||| || |||||||||||||| ||||||| ||||||| |||||||||||    
T  928708 gctttcgcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaag 928631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 8683242 - 8683291
Alignment:
Q  57 ttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatg 106  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  8683242 ttcgcataggtttccgacccaccaaaggtggacgactaatccggctcatg 8683291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 10040659 - 10040586
Alignment:
Q  59 cgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||| |||||||| ||||||||||||| |||||| | |||||||| ||||||||||||||| |||||| |||||    
T  10040659 cgcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagc 10040586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 26043920 - 26043843
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||  ||||||| ||| ||||||||||   ||||||||||||||||||||||||||||||| |||||| ||||    
T  26043920 gctttcgccccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaag 26043843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 36043673 - 36043730
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtag 111  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| |||||||    
T  36043673 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtag 36043730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 44064652 - 44064587
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||| ||| ||||||||||||||||||||||   |||||||||||| ||||||||||||||||||    
T  44064652 gcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggttcatgcgtagaggcatgc 44064587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 45450447 - 45450524
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||||| || || ||||||| |||||||||||  ||| |||||||||||||||| ||||||||||||    
T  45450447 ctttcgcaccggtttccaactcatcaaaggtggacgactaatctagcttatgcgtagaggcatgcgcactggtcaagc 45450524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 7648848 - 7648772
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    |||||||||| || || ||||||| ||||||| | ||||||||||||||| |||||||||| |||| ||||||||||    
T  7648848 gctttcgcattggatttcgacccaacaaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaa 7648772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 7650335 - 7650276
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagag 113  Q
    ||||||||| |||||||| ||||||||||||| | ||||||||||||||| |||||||||    
T  7650335 gctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagag 7650276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 39849144 - 39849101
Alignment:
Q  89 cgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  39849144 cgactaatccggctcatgcgtagaggcatgcacactggccaagc 39849101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 49543615 - 49543556
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||||||| |||||| | |||||||| |||||| |||||||||||||||||||||    
T  49543615 gtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactg 49543556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 53649833 - 53649758
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| |||||||||| ||| |||||||  |||||||||||||||||||||||||| || || |||||| ||||    
T  53649833 tttcgcaccggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaag 53649758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 24506647 - 24506725
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| ||| |||||||||||||||||| |||   ||||||||| | ||||||||||||||||||  ||||||||||||    
T  24506647 gcttttgcaccggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagc 24506725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 48342128 - 48342058
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| | |||||||| ||||||||| | ||||||||||| || |||||||||||||||||| ||||    
T  48342128 gctttcgcacctgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcact 48342058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 13894034 - 13893969
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||| |||||| ||| ||||||||||| | ||||||||||||||| || ||||||||||||    
T  13894034 gctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgc 13893969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 50753340 - 50753409
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacac 123  Q
    ||||| ||| |||||||||||||||||| | |  |||||||||||| ||| |||||||||||||||||||    
T  50753340 gcttttgcaccggtttccgacccaccaatgatgaacgactaatccgactcgtgcgtagaggcatgcacac 50753409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 6462518 - 6462442
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| |||||||| |||||| ||   | | ||||||||||||||||||||||||||||||| |||||| |||||    
T  6462518 tttcgcaccggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactggccaagc 6462442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 15084944 - 15085016
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||| || |||||||||| ||||||||| |||||||||||||  |||| | |||||||| |||||||||||    
T  15084944 gctttcacaccggtttccgatccaccaaagatagacgactaatctagctcgtacgtagaggtatgcacactgg 15085016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 51682955 - 51683031
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||  ||||||||||||||||  ||| | ||||||||||||||| || | |||||||||| ||||||||||||    
T  51682955 tttcgcactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagc 51683031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 55069678 - 55069742
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||| ||| ||||||||||||||||||||||   ||| ||||||||||| ||||||||||||||    
T  55069678 gcttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatg 55069742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 33689049 - 33688982
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||| ||||||||| ||| || |||||| | ||||||||||||||||||||| |||||| ||||    
T  33689049 cggtttccaacccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcactggccaag 33688982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 34662320 - 34662383
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    |||||||||||||||| | |||| |||||| |||||||||| |||||||||| ||||| |||||    
T  34662320 tttcgcatcggtttccaatccactaaaggtggacgactaattcggctcatgcatagagacatgc 34662383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 54448365 - 54448326
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaa 95  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  54448365 tttcgcatcggttttcgacccaccaaaggtagacgactaa 54448326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 8362682 - 8362620
Alignment:
Q  57 ttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    |||||| ||||||| || |||| |||||| ||||||||||  |||||||||||||||||||||    
T  8362682 ttcgcaccggtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcatgc 8362620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 11393476 - 11393526
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatg 106  Q
    |||||||||||||||||||| | ||||||| ||||||||||| ||||||||    
T  11393476 tttcgcatcggtttccgaccaatcaaaggtggacgactaatctggctcatg 11393526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 35998570 - 35998648
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||| ||||||| |||||| ||||| ||||||  ||| ||||||||||||||  ||||| ||||||    
T  35998570 gctttcgcaccggtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagc 35998648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 8164648 - 8164583
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| ||||||||||| | ||||||||||| ||| |||||| |||||||| |||||| |||||    
T  8164648 tttccgatccaccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagc 8164583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 22909890 - 22909833
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaga 112  Q
    ||||||||  ||||||||||||| |||||||  ||||||||| |||||||||||||||    
T  22909890 ctttcgcactggtttccgacccatcaaaggtgcacgactaattcggctcatgcgtaga 22909833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 37319889 - 37319966
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| | |||||| ||||| ||| ||| ||||| |||| | |||| |||||||||||||||||||| |||||||    
T  37319889 ctttcgcaccagtttccaacccatcaacggtggacgattaattcagctcgtgcgtagaggcatgcacacttgtcaagc 37319966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 40660336 - 40660397
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||| |||||||||||||||  | || |||||||| |||||||||||||||||| |||||    
T  40660336 cggttttcgacccaccaaaggtgaatgattaatccggttcatgcgtagaggcatgcgcactg 40660397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 47303507 - 47303552
Alignment:
Q  73 acccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||    
T  47303507 acccgccaaaggttgacgactaatccggctcatgtgtagaggcatg 47303552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 19873468 - 19873420
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagagg 114  Q
    ||||||||||||| |||| | ||||||||||||||||| ||||||||||    
T  19873468 gtttccgacccacaaaagatggacgactaatccggctcgtgcgtagagg 19873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 29195318 - 29195382
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||| | |||||||| |||||| |||||| ||||||||||| || ||||| |||||||||||    
T  29195318 gctttcgtaccggtttccaacccactaaaggtggacgactaatctggttcatgtgtagaggcatg 29195382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 31072986 - 31072922
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| |||||||| ||| ||||||||| ||||| ||||| || || ||||||||||||||    
T  31072986 gctttcgcaccggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatg 31072922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 2029268 - 2029331
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    |||||||  ||||| ||||||| ||| ||| | |||||||||| ||||||||||||||||||||    
T  2029268 tttcgcactggtttgcgacccatcaatggtgggcgactaatccagctcatgcgtagaggcatgc 2029331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 32873571 - 32873626
Alignment:
Q  77 accaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| | ||||||||| ||||||| ||||||||||||  ||||||||||||    
T  32873571 accaaaggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagc 32873626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 34374441 - 34374512
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||| || ||||||||||||||||||||   | ||||||||||| || |||||| ||||||||| |||||    
T  34374441 gctttcacaccggtttccgacccaccaaagaagggcgactaatccgacttatgcgttgaggcatgcgcactg 34374512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 40944972 - 40944918
Alignment:
Q  72 gacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggt 127  Q
    ||||||||||||||   ||||||||||| |||||||||||||||||||| ||||||    
T  40944972 gacccaccaaaggtgagcgactaatccg-ctcatgcgtagaggcatgcatactggt 40944918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 132
Target Start/End: Complemental strand, 30045917 - 30045851
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||| ||||||| ||||||| ||||||||||| | ||| ||||||||| ||||| |||||| |||||    
T  30045917 gtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagc 30045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 32522076 - 32522010
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||| ||||||| ||||||||||| | |||||||||| |  ||||| ||| |||||||    
T  32522076 ggtttccgacccatcaaaggtggacgactaatctgactcatgcgtaaatacatgcgcaccggtcaag 32522010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 47164214 - 47164152
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggca 116  Q
    |||||| || |||||||||| ||||||||| |   ||||||||||||||| ||||||||||||    
T  47164214 gctttcacaccggtttccgatccaccaaagatgagcgactaatccggctcgtgcgtagaggca 47164152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 2668169 - 2668092
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||  | ||||| |||||| ||||||   |||||||||| |||| ||||||||||||||| |||||| ||||    
T  2668169 gctttcgcactgatttccaacccactaaaggtgagcgactaatccagctcttgcgtagaggcatgcgcactggccaag 2668092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 118
Target Start/End: Original strand, 42412808 - 42412837
Alignment:
Q  89 cgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||||||||||||||||||||||||    
T  42412808 cgactaatccggctcatgcgtagaggcatg 42412837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 10043790 - 10043726
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| |||||||||||||||||| |||   ||| ||||| | ||| ||||||||||||||    
T  10043790 gctttcgcaccggtttccgacccaccaatggtgagcgattaatctgcctcgtgcgtagaggcatg 10043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 24146340 - 24146392
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||||| ||| ||| |||||||||| |||||||||  |||||||||||    
T  24146340 tttccgacccatcaatggtggacgactaattcggctcatgtctagaggcatgc 24146392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 10927718 - 10927640
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||||| |||||    
T  10927718 gctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagc 10927640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 4479296 - 4479372
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||| |||||    
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagc 4479372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 18374121 - 18374044
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||| ||| |||||| ||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  18374121 cttttgcaccggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagc 18374044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 43027417 - 43027352
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  43027417 gctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgc 43027352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 8141214 - 8141136
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||||||||| ||||||||||| || |||||||||| | |||||||||||||||||||| |||||| |||||    
T  8141214 gctttcgcatcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagc 8141136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 26571036 - 26570958
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||| |||||||||||||| || ||||||| |||||||||||||||||||||||||| |||| |||||||| |||||    
T  26571036 gctttcacatcggtttccgactcatcaaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagc 26570958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 9859993 - 9860070
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||| |||||||||||||| ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||| ||||    
T  9859993 gcttttgcatcggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaag 9860070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 45521280 - 45521203
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||||| |||||||   ||||||||||||||||||||||||||||||| ||||| |||||    
T  45521280 gctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaag 45521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 15884556 - 15884624
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||    
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcact 15884624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 2964188 - 2964110
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||| |||||||||||||| | |||||||||||| || |||||||||||||||||| ||| |||||    
T  2964188 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagc 2964110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 6100584 - 6100506
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||| |||||||| ||||||  |||||||||||||||||||||||| ||||||| |||||| |||||    
T  6100584 gctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagc 6100506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 43033013 - 43032935
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||| |||||||||||||| | ||||||||||||||| || |||||||||||| |||||| |||||    
T  43033013 gctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagc 43032935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 27976003 - 27975926
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||||| | ||||||| |||||| | ||| |||||||||||| |||||||||||||||||||| |||||    
T  27976003 gctttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaag 27975926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 28033272 - 28033195
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||||| | ||||||| |||||| | ||| |||||||||||| |||||||||||||||||||| |||||    
T  28033272 gctttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaag 28033195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 33401799 - 33401874
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||||||||  || |||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  33401799 ctttcgcatcggtttt-gatccactaaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaag 33401874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 14846687 - 14846616
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| || ||||||||||||||||||| ||||||| ||| | ||||||||||||||||||| |||||    
T  14846687 gctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactg 14846616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 583924 - 583846
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||  | ||| ||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||    
T  583924 gctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagc 583846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 24837354 - 24837276
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| | |||||||| ||||||||||| |||||||||||| |||| ||| |||||||||| ||||||| |||||    
T  24837354 gctttcgcaccagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagc 24837276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 2467116 - 2467193
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| ||||||||||| ||||||  || ||||||||||||||||||||| ||||| ||||| |||||| ||||    
T  2467116 gctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaag 2467193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 3418511 - 3418588
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||||| | |||||||||||| |||||| |||||| ||||    
T  3418511 gctttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaag 3418588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 8997542 - 8997607
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||| |||||||||||||||||||| |  |||||||||| |||||||||||| ||||||||    
T  8997542 gctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgc 8997607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 17981553 - 17981476
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| ||||||||||| |||||||| | | | |||||| || ||| |||||||||||||||||||||||||||    
T  17981553 gctttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaag 17981476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 36662515 - 36662444
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||||||||||||| |||  ||| || |||||||||||||| |||| ||||||||||||| ||||||    
T  36662515 ctttcgcatcggtttccgatccattaaaagtggacgactaatccggttcatacgtagaggcatgcgcactgg 36662444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 3568005 - 3567939
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||| |||  |||||||||||    
T  3568005 ggtttccgacccaccaaaggtggatgactaatttggctcatgcgtagaggtatgtgcactggtcaag 3567939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 10535402 - 10535480
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| | |||||||||  |||||||||  ||||||||| |||||||||||| ||| ||||| ||||||||||||    
T  10535402 gctttcgcaccagtttccgacttaccaaaggtgaacgactaattcggctcatgcgtggagacatgcgcactggtcaagc 10535480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 13357964 - 13358022
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcaca 122  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||| ||||||||||||||    
T  13357964 cggtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcatgcaca 13358022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 3379812 - 3379881
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||| || |||||||||||||||| || ||||||||||||| ||||||| ||||||| ||| |||||    
T  3379812 tttcgcaccgatttccgacccaccaaaagtggacgactaatccgactcatgcatagaggcgtgcgcactg 3379881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 44893277 - 44893354
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||| ||| |||||||||||||| ||| |||   ||| ||||||||||| |||||||||||||||||||||| |||||    
T  44893277 cttttgcaccggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagc 44893354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 8803166 - 8803106
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagagg 114  Q
    |||||||||||||||||||||||||||  | | | ||||||||||||||| ||||||||||    
T  8803166 gctttcgcatcggtttccgacccaccattgatgggcgactaatccggctcgtgcgtagagg 8803106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 11298265 - 11298337
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| ||||||||||||||||||||||   ||| ||||  ||||||||| ||||||||||| ||||||    
T  11298265 gctttcgcaccggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcactgg 11298337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 22958859 - 22958811
Alignment:
Q  77 accaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  22958859 accaaaggtggacgactaatccggctcatgcatagagacatgcacactg 22958811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 24938570 - 24938625
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    |||||||||| ||| ||||||| || ||||||||||| ||||||||||||||||||    
T  24938570 cggtttccgatccatcaaaggtggatgactaatccggttcatgcgtagaggcatgc 24938625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 29933849 - 29933807
Alignment:
Q  89 cgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  29933849 cgactaatccggctcatacgtagaggcatgtacactggtcaag 29933807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 4772049 - 4772094
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccg 99  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||    
T  4772049 gcttacgcaccggtttccgacccaccaaaggtggacgactaatccg 4772094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 14666069 - 14666146
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||| |||||||||||  || | ||||||||| ||||  ||||||||||||||| |||||| ||||    
T  14666069 gctttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaag 14666146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 23895679 - 23895602
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| | |||||||||||| ||||||| ||||| ||||||  ||| |||||||||| |||| |||||| |||||    
T  23895679 ctttcgcacccgtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagc 23895602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 16291201 - 16291265
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    |||||| || |||||| |||||||||||||||   |||||||||| |||||||| ||||||||||    
T  16291201 gctttcacaccggttttcgacccaccaaaggtgagcgactaatccagctcatgcatagaggcatg 16291265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 16894047 - 16893985
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| |||||||||||| ||||||||| | |||| ||||||||||||||||| |||||||    
T  16894047 gctttcgcaccggtttccgacc-accaaaggtgggcgac-aatccggctcatgcgtaaaggcatg 16893985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 22212513 - 22212589
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||||| |||||| ||| |||||||||||   ||||||||||||| | |||||||| ||||||  |||||||||    
T  22212513 gctttcgcaccggttttcgaaccaccaaaggtgagcgactaatccggcccgtgcgtagaagcatgcgtactggtcaa 22212589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 68097 - 68168
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||| ||| |||||||||||||| |||||||  |||| ||||||||||| || ||| ||||||||| |||||    
T  68097 cttttgcaccggtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactgg 68168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 3692945 - 3692874
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||| | |||||| ||||| |||||||||  |||| |||| ||||||||||||||||| |||| |||||    
T  3692945 gctttcgtaccggttttcgacctaccaaaggtgaacgattaattcggctcatgcgtagaggtatgcgcactg 3692874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 8817144 - 8817082
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcat 117  Q
    |||||||| ||||||||||| || ||||| ||||| | ||||||| ||| |||||||||||||    
T  8817144 ctttcgcaccggtttccgactcatcaaagatagacaagtaatccgactcgtgcgtagaggcat 8817082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 39969913 - 39969983
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    |||||||||||||||||||| ||| ||| | | | ||||||||| | |||||| |||||||||||| ||||    
T  39969913 gctttcgcatcggtttccgatccatcaatgatgggcgactaatctgactcatgtgtagaggcatgcgcact 39969983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 993300 - 993235
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||| || |||| || ||||||||||| ||||||||||||  ||||| ||||||| |||||    
T  993300 gctttcgcaccgatttctgaaccaccaaaggtggacgactaatccaactcatacgtagagacatgc 993235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 11786017 - 11785956
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||| ||| ||||| |   ||| ||||| |||||||||||||||||||||||||||    
T  11786017 cggtttccgatccatcaaagatgagcgattaatctggctcatgcgtagaggcatgcacactg 11785956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 1012983 - 1013039
Alignment:
Q  62 atcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    |||||||| ||| |||| ||||||  |||| |||| |||||||||||||||||||||    
T  1012983 atcggttttcgatccactaaaggtgaacgattaattcggctcatgcgtagaggcatg 1013039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 6042915 - 6042855
Alignment:
Q  72 gacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||  ||| | |||||||||||||||||||||  |||||||| |||||| |||||    
T  6042915 gacccaccagtggtgggcgactaatccggctcatgcgtttaggcatgcgcactggccaagc 6042855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 7673657 - 7673725
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||| |||||| ||| |||| |||| | | |||  |||||||||| ||||||||||||||||||||    
T  7673657 tttcgcaccggttttcgatccactaaagatgggcgaaaaatccggctcgtgcgtagaggcatgcacact 7673725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 25848276 - 25848224
Alignment:
Q  66 gtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    |||| ||||||| ||||||| |||||||| |||| ||||||||||||| ||||    
T  25848276 gttttcgacccagcaaaggtggacgactagtccgactcatgcgtagagacatg 25848224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 26325921 - 26325850
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||    
T  26325921 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactg 26325850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 5855631 - 5855553
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||| ||||||||||||||||||| |||||| |||||    
T  5855631 gctttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagc 5855553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 4581681 - 4581758
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| |||||| ||||    
T  4581681 gctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaag 4581758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 8764100 - 8764023
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||| ||||    
T  8764100 gctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaag 8764023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 10422897 - 10422820
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  10422897 gctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaag 10422820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 17642003 - 17642080
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| ||||    
T  17642003 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaag 17642080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 9659178 - 9659254
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||| |||||    
T  9659178 gctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaa 9659254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 41663855 - 41663926
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||| |||||    
T  41663855 gctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactg 41663926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 10172970 - 10173048
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||||||||  |||||| |||||    
T  10172970 gctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagc 10173048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 30927726 - 30927804
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| ||| ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||| ||| |||||    
T  30927726 gcttttgcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagc 30927804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 34697444 - 34697374
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    |||||||||||||||||| ||||| |||| || | ||||||||||||||||||||||||||||||||||||    
T  34697444 gctttcgcatcggtttccaacccatcaaaagtgggcgactaatccggctcatgcgtagaggcatgcacact 34697374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 26660246 - 26660182
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  26660246 gctttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgc 26660182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 49078223 - 49078146
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||||||| ||||| |||  |||||||||||||||||||||||||||||||| |||||| ||||    
T  49078223 gctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaag 49078146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 50503360 - 50503437
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||||||||||||||||||||  ||| | |||| |||||||||| ||||||||||||||| |||||||||||    
T  50503360 gctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaag 50503437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 10336619 - 10336547
Alignment:
Q  60 gcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||| ||| ||| ||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  10336619 gcatcggttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagc 10336547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 10507807 - 10507735
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||| || ||||||||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||    
T  10507807 gctttcgaattggtttccgacccaccagtggtggacgactaatccggctcatgcgtagaggtatgcacactgg 10507735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 5504139 - 5504076
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    |||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  5504139 ctttcgtaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatg 5504076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 11397888 - 11397951
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcat 117  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  11397888 gctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcat 11397951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 37339929 - 37339851
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||| ||||||||||||| | ||||||||||||||| ||||| ||||||||| |||||| |||||    
T  37339929 gctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagc 37339851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 43959820 - 43959898
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||| |||| |||||| | ||||||||||||||| ||||||||||||||| |||||| |||||    
T  43959820 gctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagc 43959898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 44969773 - 44969695
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||| || |||||||||| ||||||| | | ||||||||||||||||||||||||| |||||||||||||| |||||    
T  44969773 gctttcacaccggtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagc 44969695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 45361881 - 45361959
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||||||||| ||||||  ||||||||||||||| |||||||| ||||||| |||||| |||||    
T  45361881 gctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagc 45361959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 18915976 - 18915899
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| |||||||| ||||||||| |||   ||||||||||||||| |||||||||||||||||||||| ||||    
T  18915976 gctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaag 18915899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 32142845 - 32142922
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    |||||||||||||||||||||||| |||||||   |||||||| ||||||||||||| |||||||| |||||| ||||    
T  32142845 gctttcgcatcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaag 32142922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 35211171 - 35211236
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    |||||| || |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  35211171 gctttcacaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagaggcatgc 35211236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 32980 - 32916
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||| |||||||||||| ||| |||| ||||||||||||| |||||||||||||||||||||    
T  32980 gctttcgtatcggtttccgatccatcaaaagtagacgactaattcggctcatgcgtagaggcatg 32916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 16956575 - 16956499
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    |||||||||  |||||||||||||||||||||    |||||||||||||| ||||||||||||||| ||||||||||    
T  16956575 gctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaa 16956499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 14254278 - 14254345
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||  ||||| |||||    
T  14254278 ggtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagc 14254345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 14357863 - 14357788
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    |||||||| |||||||||||||| ||| |||| |||| |||||||| || ||||||||||||||| ||||||||||    
T  14357863 ctttcgcaccggtttccgacccatcaatggtaaacgattaatccggttcgtgcgtagaggcatgcgcactggtcaa 14357788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 33418125 - 33418192
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||| |||||| |||||    
T  33418125 ggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagc 33418192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 33498838 - 33498916
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| | || ||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||| |||||| |||||    
T  33498838 gctttcgtaccgctttacgatccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagc 33498916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 34719885 - 34719807
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| | ||||||||||||||||||||   ||||||||| | ||| ||||||||||||||| ||||||||||||    
T  34719885 gctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagc 34719807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 51437566 - 51437512
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcg 108  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||    
T  51437566 gctttcgcaccggtttccgacccaccaaaggtggatgactaatccggctcatgcg 51437512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 2980930 - 2981007
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| || |||||||||||| |||  | ||||||||||||| ||| |||||||||||||||||||||| ||||    
T  2980930 gctttcgcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaag 2981007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 16263653 - 16263576
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||||||| ||| |||| || |||||||| ||||||| |||||||||||||||| |||||| |||||    
T  16263653 ctttcgcaccggtttccgatccatcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagc 16263576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 17092480 - 17092548
Alignment:
Q  58 tcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||| ||||||| || | ||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  17092480 tcgcaccggtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactgg 17092548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 35908865 - 35908796
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||| ||| |||||||||||||||  | ||| ||||||||||||||||||||||||||||||||| |||||    
T  35908865 gcttttgcaccggtttccgacccac--atggtggacgactaatccggctcatgcgtagaggcatgcgcactg 35908796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 50095013 - 50094937
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||| ||| ||||||||||||||| || ||| ||||||||||||| |||||||||||| ||||||  |||||||||    
T  50095013 gcttttgcaccggtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaa 50094937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 32150921 - 32150992
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||||||||| ||||||| |||||||   |||||||| ||||||||||||| |||||||| |||||    
T  32150921 gctttcgcatcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactg 32150992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 18808374 - 18808296
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||||||||  |||| ||| ||| ||||||||||||| | || |||||||| ||||||||||||    
T  18808374 gctttcgcaccggtttccgacccaataaagttagtcgaataatccggctcatacataaaggcatgcgcactggtcaagc 18808296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 46929737 - 46929815
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||| ||| ||| |||| || |||||||||||||||||||| || ||||||||| || ||| |||||    
T  46929737 gctttcgcatcggttttcgatccatcaaaagtggacgactaatccggctcatgtgtggaggcatgcgcattggccaagc 46929815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 12036756 - 12036821
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| ||||||||||| ||||| ||||| ||||| ||||||||||||||| |||||| |||||    
T  12036756 tttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaagc 12036821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 33004015 - 33004092
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||| ||||||||||  ||| |  |||||||||||||| ||||||||||||||| |||||| |||||    
T  33004015 ctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagc 33004092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 17389880 - 17389804
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||||||| |||||||||||||| ||    | |||||||||||| |||||||||| ||||||||| ||||||||||    
T  17389880 gctttcgcaccggtttccgacccatcagcaatggacgactaatccagctcatgcgtggaggcatgcgcactggtcaa 17389804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 45726433 - 45726504
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||| | || ||||| |||||||||||  |||||||||||||||||||||||||| ||| | ||||||    
T  45726433 ctttcgcaccagtctccgatccaccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactgg 45726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 48761272 - 48761221
Alignment:
Q  67 tttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||| ||||||||| |||||||||||| |||| ||||||||||||||    
T  48761272 tttccgaccgaccaaaggtggacgactaatccagctcgtgcgtagaggcatg 48761221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 892301 - 892355
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcg 108  Q
    ||||||||| || ||||||| ||||||||||| | ||||||||||||||||||||    
T  892301 gctttcgcaccgatttccgatccaccaaaggtgggcgactaatccggctcatgcg 892355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 6899667 - 6899597
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| |||||||||| ||| ||||||| | ||||||||||||||  |||||| |||||||| ||||    
T  6899667 gctttcgcaccggtttccgatccatcaaaggtgggcgactaatccggcttgtgcgtaaaggcatgcgcact 6899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 12744522 - 12744600
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||| ||||| ||||||||||  ||   |||||||| |||||||||||||||| ||||| |||| |||||||    
T  12744522 gctttcgcatctgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagc 12744600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 12755512 - 12755590
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||| ||||| ||||||||||  ||   |||||||| |||||||||||||||| ||||| |||| |||||||    
T  12755512 gctttcgcatctgtttctgacccaccaacagtgagcgactaattcggctcatgcgtagagacatgcgcactagtcaagc 12755590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 131
Target Start/End: Original strand, 42710144 - 42710214
Alignment:
Q  61 catcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||||| | ||||| ||| |||||||||| ||| | |||||||||||||||| |||||| ||||    
T  42710144 catcggtttccgatctaccaatggtggacgactaattcggtttatgcgtagaggcatgcgcactggccaag 42710214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 48798105 - 48798147
Alignment:
Q  90 gactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  48798105 gactaatccggctcatgcgtagaggcatgcgcactagtcaagc 48798147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 1764196 - 1764253
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtag 111  Q
    ||||||||||| |||||||||| | ||||||| | ||||||||||| |||||||||||    
T  1764196 gctttcgcatcagtttccgacctatcaaaggtgggcgactaatccgcctcatgcgtag 1764253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 2567384 - 2567307
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||| | |||||||||||||||||||| | |||| |||||| | ||| || |||||||||||| |||||| |||||    
T  2567384 ctttcgtaccggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagc 2567307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 18649352 - 18649429
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||||| | |||| |||||| | ||| ||||| ||||| | ||||||||||||| ||||||||||||    
T  18649352 ctttcgcaccggtttccaatccactaaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagc 18649429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 31576547 - 31576608
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggca 116  Q
    |||| ||| ||||||||||| || ||||| | ||||||||| ||||||||||||||||||||    
T  31576547 cttttgcaccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggca 31576608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 38791610 - 38791679
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    |||||| ||||||||  || ||| ||||| | |||||||||| |||||||||||||||||||||| ||||    
T  38791610 ctttcgtatcggtttttgatccatcaaagatggacgactaattcggctcatgcgtagaggcatgcgcact 38791679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 41696597 - 41696674
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||||| |||||||| ||| |||||||   ||||||||| |  || ||||||||||||| |||||||||||||    
T  41696597 gctttcgcatcagtttccgatccatcaaaggtgagcgactaatctgattcgtgcgtagaggcatacacactggtcaag 41696674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 50371834 - 50371911
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| |||||||||| ||||||||| | | ||||||||||||||  |||||||| ||||||  ||||| |||||    
T  50371834 ctttcgcaccggtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagc 50371911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 13266019 - 13265975
Alignment:
Q  82 aggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||    
T  13266019 aggtggacgactaacccggctcatgcgtagaggcatgcgcactgg 13265975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 15466074 - 15466010
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||| ||||||||||||||||||||||||   |||| |||| | ||| ||||||||||||||    
T  15466074 gctttcgtatcggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatg 15466010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 28324615 - 28324650
Alignment:
Q  90 gactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||||||||||||||||||||||||| |||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactg 28324650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 3850741 - 3850799
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaga 112  Q
    ||||||||| ||||||||||||||  |||||| | ||||||||||| ||| ||||||||    
T  3850741 gctttcgcaccggtttccgacccattaaaggtgggcgactaatccgcctcgtgcgtaga 3850799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 17358470 - 17358548
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| | ||||||| ||||||| |||| |  || ||||||| |||||||||||| |||||||| || |||||||||    
T  17358470 gctttcgtagcggtttctgacccactaaagatgaacaactaatcgggctcatgcgtaaaggcatgcgcattggtcaagc 17358548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 18708539 - 18708609
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||| |||||||||| | ||||| |||||||   ||||||||| |||||||| |||||||||||| ||||    
T  18708539 gctttagcatcggttttcaacccatcaaaggtgagcgactaatctggctcatgtgtagaggcatgcgcact 18708609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 25178575 - 25178653
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||| |||||||| |||||||| ||||||  |||||||||||||||  |  ||||||| |||| |||||| |||||    
T  25178575 gctttcgtatcggttttcgacccactaaaggtgaacgactaatccggcttgtctgtagaggtatgcgcactggccaagc 25178653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 9853276 - 9853349
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggt 127  Q
    ||||| ||| || |||| |||||||||||||| ||||| ||||| || || || |||||||||||| |||||||    
T  9853276 gcttttgcaccgatttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggt 9853349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 17988692 - 17988737
Alignment:
Q  87 gacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||| ||||||||||||| |||| |||||| |||||    
T  17988692 gacgactaatccggttcatgcgtagaggtatgcgcactggccaagc 17988737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 21849205 - 21849274
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    |||||| | |||||| |||||||||||  ||   ||||||||||||||| ||||||||||||||| ||||    
T  21849205 ctttcgtaccggttttcgacccaccaatagtgagcgactaatccggctcgtgcgtagaggcatgcgcact 21849274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 40288487 - 40288548
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||||||||||| | |   ||||||||||||||| || ||||||||||||| |||||    
T  40288487 ggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactgg 40288548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 47084175 - 47084231
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgta 110  Q
    ||||||||| |||||||| |||||||||| || |  | |||||||||||||||||||    
T  47084175 gctttcgcaccggtttccaacccaccaaaagtgggtggctaatccggctcatgcgta 47084231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 6966 - 6889
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| ||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||||| ||||    
T  6966 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaag 6889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 8699 - 8777
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||| |||||    
T  8699 gctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagc 8777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 42831 - 42901
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||| |||||||||||||||||||||| | |||||||||||||||||| |||||||||||| |||||    
T  42831 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactg 42901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 9551 - 9495
Alignment:
Q  56 tttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaga 112  Q
    ||||||| ||||||| |||||||||||||| ||||||||||  ||||||||||||||    
T  9551 tttcgcaccggtttctgacccaccaaaggtggacgactaatttggctcatgcgtaga 9495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 681 - 604
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||||| ||||||||||||||||||||||   ||||||||| ||||||| ||||||||||||||||||| |||||    
T  681 gctttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaag 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 319533 - 319455
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||| |||||||| |||||| |||| |||||| |||||    
T  319533 gctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagc 319455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 9945 - 9878
Alignment:
Q  65 ggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||    
T  9945 ggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagc 9878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 155709 - 155779
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacact 124  Q
    ||||||||| ||| |||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||    
T  155709 gctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcact 155779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 12780 - 12703
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||| ||||||| |||||| ||||||| | |||||||||||| || |||||||||||||||||||||| |||||    
T  12780 ctttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagc 12703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 6077 - 6005
Alignment:
Q  60 gcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    |||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||  |||||| |||||    
T  6077 gcatcggtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagc 6005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 1612 - 1684
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||||||| |||||| ||||||||||||||| | ||||||||  ||||||||||||||||||||| ||||||    
T  1612 gctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactgg 1684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 41155 - 41084
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    ||||||| | ||||||||||| |||||||| | | ||||||||||||||| |||||||||||||||||||||    
T  41155 gctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactg 41084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 224427 - 224368
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagagg 114  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagagg 224368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 186618 - 186564
Alignment:
Q  64 cggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||||||||||||| |||| |  |||||||||||||||| ||||||||||||||    
T  186618 cggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatg 186564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 12684 - 12606
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||  | ||| ||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||    
T  12684 gctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagc 12606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 26293 - 26216
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||  |||||||||| || |||  || ||||||||||||||||| |||||||||||||||||||||| |||||    
T  26293 ctttcgcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagc 26216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 68621 - 68560
Alignment:
Q  58 tcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgc 119  Q
    ||||| |||||| ||||||||||||||| | ||||||||||||||| |||||||||||||||    
T  68621 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgc 68560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 7833 - 7910
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaag 131  Q
    ||||||| | |||||||||| ||||||||||| | |||||||||| ||| |||||||||||||||| |||||| ||||    
T  7833 gctttcgtaccggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaag 7910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 94978 - 95055
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaa-ggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    ||||| ||| || |||||||||||||||| ||| | |||||||||||||||||||||| |||||||| ||||||||||    
T  94978 gcttttgcaccgatttccgacccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaa 95055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 17494 - 17423
Alignment:
Q  61 catcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||||||||||| ||| ||| | ||||||||||||||| || ||||| |||||| ||||||||||||    
T  17494 catcggtttccgacccatcaatggtgggcgactaatccggctcgtgtgtagaagcatgcgcactggtcaagc 17423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 58032 - 58107
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaa 130  Q
    |||||||| |||| ||||| ||||||||| ||| ||||||||||  |||||||||||||| || ||||||||||||    
T  58032 ctttcgcaccggtatccgatccaccaaagataggcgactaatccaactcatgcgtagaggtatacacactggtcaa 58107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 250024 - 250095
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    |||||||| || ||||||||||||||||||    ||||||||||||||| ||||||||||||||| ||||||    
T  250024 ctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactgg 250095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 219480 - 219408
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactgg 126  Q
    ||||| ||| |||||| ||| ||| ||||||| |||||||||||| | || ||||||||||||||| ||||||    
T  219480 gcttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactgg 219408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1333 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1333
Description:

Target: scaffold1333; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 1985 - 2033
Alignment:
Q  171 tagtacgttgagaatattaagtttgttgatgaacacaatgctatagaag 219  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  1985 tagtaggttgagaatattaagcttgttgatgaacagaatgctatagaag 2033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 16989 - 16931
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagag 113  Q
    ||||||||||||||||| |||||||||||||   ||||||||| ||||| |||||||||    
T  16989 ctttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagag 16931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 72866 - 72802
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatg 118  Q
    ||||| ||| |||||| |||||||||   ||||| ||||||||||||||||||||| ||||||||    
T  72866 gcttttgcaccggttttcgacccacctgtggtaggcgactaatccggctcatgcgttgaggcatg 72802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 8274 - 8232
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaat 96  Q
    ||||||||| |||||||||||| ||||||||| ||||||||||    
T  8274 gctttcgcaccggtttccgacctaccaaaggtggacgactaat 8232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 25195 - 25125
Alignment:
Q  55 ctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactg 125  Q
    |||||||| |||||||||| ||||||||||| ||||| ||||| |  |||||||||||  ||||| |||||    
T  25195 ctttcgcaccggtttccgatccaccaaaggtggacgattaatctgattcatgcgtagaaacatgcgcactg 25125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 149496 - 149418
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||| ||| ||||||| |||||||||  ||| | |||||||||   ||| | ||||||||||||||||||||||||||    
T  149496 gcttttgcaccggtttctgacccaccattggtgggcgactaatctacctcgtacgtagaggcatgcacactggtcaagc 149418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 65150 - 65228
Alignment:
Q  54 gctttcgcatcggtttccgacccaccaaaggtagacgactaatccggctcatgcgtagaggcatgcacactggtcaagc 132  Q
    ||||||||| |||||||||| | | |||| ||   |||||||||| |||||||||||||| ||||| |||||| |||||    
T  65150 gctttcgcaccggtttccgatctatcaaaagtgagcgactaatccagctcatgcgtagagacatgcgcactggccaagc 65228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University