View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3918_low_134 (Length: 280)

Name: NF3918_low_134
Description: NF3918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3918_low_134
NF3918_low_134
[»] chr5 (45 HSPs)
chr5 (16-269)||(43001840-43002095)
chr5 (35-98)||(30098391-30098454)
chr5 (36-98)||(14873577-14873639)
chr5 (36-98)||(21576687-21576749)
chr5 (35-99)||(21190997-21191061)
chr5 (35-100)||(19579766-19579831)
chr5 (35-95)||(21194068-21194128)
chr5 (35-98)||(27932289-27932352)
chr5 (35-98)||(31084382-31084445)
chr5 (35-98)||(39698606-39698669)
chr5 (35-98)||(43564935-43564998)
chr5 (48-98)||(35017110-35017160)
chr5 (35-97)||(39268541-39268603)
chr5 (62-98)||(22423766-22423802)
chr5 (40-100)||(24238601-24238661)
chr5 (35-98)||(3966568-3966631)
chr5 (35-98)||(6401563-6401626)
chr5 (35-98)||(11686003-11686066)
chr5 (38-105)||(16304361-16304428)
chr5 (35-98)||(21522815-21522878)
chr5 (35-98)||(21533381-21533444)
chr5 (35-98)||(21542095-21542158)
chr5 (64-98)||(10298633-10298667)
chr5 (64-98)||(17123130-17123164)
chr5 (48-98)||(17593665-17593715)
chr5 (35-88)||(15382539-15382592)
chr5 (64-96)||(4105342-4105374)
chr5 (48-92)||(17088358-17088402)
chr5 (58-98)||(19820330-19820370)
chr5 (38-98)||(23015926-23015986)
chr5 (35-87)||(26312823-26312875)
chr5 (35-98)||(7677770-7677833)
chr5 (35-98)||(28588616-28588679)
chr5 (35-98)||(32766874-32766937)
chr5 (35-98)||(42029806-42029869)
chr5 (35-98)||(42893414-42893477)
chr5 (35-97)||(18592138-18592200)
chr5 (64-98)||(24906254-24906288)
chr5 (64-98)||(41995547-41995581)
chr5 (65-98)||(2436995-2437028)
chr5 (35-96)||(30098982-30099043)
chr5 (35-96)||(36642696-36642756)
chr5 (66-98)||(6770621-6770653)
chr5 (58-98)||(19552478-19552518)
chr5 (58-98)||(38464315-38464355)
[»] chr7 (33 HSPs)
chr7 (15-98)||(5409773-5409856)
chr7 (16-98)||(9778540-9778622)
chr7 (35-98)||(598262-598325)
chr7 (35-98)||(21880206-21880269)
chr7 (35-98)||(24339707-24339770)
chr7 (35-98)||(43027406-43027469)
chr7 (42-98)||(29763131-29763187)
chr7 (35-98)||(32093956-32094020)
chr7 (35-98)||(1433513-1433576)
chr7 (35-98)||(15680863-15680926)
chr7 (35-98)||(32287405-32287468)
chr7 (36-98)||(21864863-21864925)
chr7 (35-95)||(13770750-13770810)
chr7 (37-104)||(17852056-17852123)
chr7 (42-100)||(22868108-22868166)
chr7 (64-98)||(35862034-35862068)
chr7 (64-113)||(28973868-28973917)
chr7 (58-98)||(6490793-6490833)
chr7 (66-98)||(30813882-30813914)
chr7 (44-87)||(3294257-3294300)
chr7 (58-97)||(8842282-8842321)
chr7 (35-98)||(33994266-33994329)
chr7 (37-95)||(43250059-43250118)
chr7 (64-98)||(3991396-3991430)
chr7 (48-98)||(14729770-14729820)
chr7 (64-98)||(29812600-29812634)
chr7 (58-96)||(40287306-40287344)
chr7 (69-98)||(19213881-19213910)
chr7 (65-98)||(20549875-20549908)
chr7 (35-100)||(26033390-26033455)
chr7 (66-98)||(18035807-18035839)
chr7 (38-98)||(25822723-25822783)
chr7 (58-98)||(28155631-28155671)
[»] scaffold0004 (1 HSPs)
scaffold0004 (35-98)||(92876-92939)
[»] chr4 (49 HSPs)
chr4 (35-98)||(23292928-23292991)
chr4 (35-98)||(3947703-3947766)
chr4 (35-95)||(49431080-49431140)
chr4 (35-98)||(36635384-36635447)
chr4 (35-98)||(848016-848079)
chr4 (35-98)||(24613632-24613695)
chr4 (35-98)||(30982809-30982872)
chr4 (42-98)||(715547-715603)
chr4 (42-98)||(752873-752929)
chr4 (35-107)||(12895207-12895279)
chr4 (34-98)||(28964190-28964254)
chr4 (35-95)||(30838275-30838335)
chr4 (35-98)||(5414103-5414166)
chr4 (64-99)||(22440558-22440593)
chr4 (46-97)||(28084589-28084640)
chr4 (35-98)||(34306746-34306809)
chr4 (35-98)||(35157927-35157990)
chr4 (64-98)||(4383449-4383483)
chr4 (64-98)||(5775306-5775340)
chr4 (40-98)||(19482738-19482796)
chr4 (40-98)||(29205527-29205585)
chr4 (65-98)||(3064870-3064903)
chr4 (34-98)||(18513177-18513242)
chr4 (37-98)||(35161092-35161153)
chr4 (58-98)||(40784030-40784070)
chr4 (46-98)||(42640589-42640641)
chr4 (58-98)||(53381532-53381572)
chr4 (35-98)||(2361917-2361980)
chr4 (35-98)||(8423660-8423723)
chr4 (35-98)||(14465007-14465070)
chr4 (35-98)||(15724485-15724548)
chr4 (35-98)||(16073448-16073511)
chr4 (51-98)||(17425349-17425396)
chr4 (35-98)||(22234821-22234884)
chr4 (35-101)||(4157203-4157269)
chr4 (35-101)||(4157490-4157556)
chr4 (64-98)||(11596299-11596333)
chr4 (64-98)||(18844425-18844459)
chr4 (64-98)||(28470448-28470482)
chr4 (64-98)||(30299012-30299046)
chr4 (64-98)||(30327880-30327914)
chr4 (45-98)||(24343577-24343630)
chr4 (61-98)||(35239199-35239236)
chr4 (66-98)||(10499229-10499261)
chr4 (66-98)||(12708227-12708259)
chr4 (35-107)||(12797271-12797343)
chr4 (36-96)||(27706110-27706170)
chr4 (58-94)||(30094090-30094126)
chr4 (58-98)||(37203329-37203369)
[»] chr2 (41 HSPs)
chr2 (35-99)||(2438660-2438724)
chr2 (38-98)||(26769579-26769639)
chr2 (35-98)||(28596523-28596586)
chr2 (35-98)||(37419808-37419871)
chr2 (35-98)||(38117101-38117164)
chr2 (35-99)||(19942319-19942383)
chr2 (35-98)||(11223795-11223857)
chr2 (35-98)||(18840955-18841018)
chr2 (35-98)||(24009349-24009412)
chr2 (35-98)||(27084323-27084386)
chr2 (35-98)||(42511324-42511387)
chr2 (43-103)||(21782741-21782801)
chr2 (36-99)||(15657930-15657993)
chr2 (35-98)||(15972927-15972990)
chr2 (35-98)||(35056933-35056996)
chr2 (35-98)||(37559031-37559094)
chr2 (36-98)||(30717461-30717523)
chr2 (24-98)||(41843489-41843563)
chr2 (58-98)||(10535687-10535727)
chr2 (35-98)||(20242669-20242732)
chr2 (59-98)||(39323316-39323355)
chr2 (35-98)||(44860385-44860448)
chr2 (64-98)||(3444828-3444862)
chr2 (64-98)||(18255946-18255980)
chr2 (64-98)||(19536363-19536397)
chr2 (64-98)||(23354583-23354617)
chr2 (64-98)||(23354926-23354960)
chr2 (64-98)||(34221465-34221499)
chr2 (64-98)||(34691771-34691805)
chr2 (64-98)||(34714183-34714217)
chr2 (36-98)||(36096306-36096368)
chr2 (35-92)||(5040788-5040845)
chr2 (64-97)||(17776681-17776714)
chr2 (65-98)||(20539634-20539667)
chr2 (58-95)||(23058389-23058426)
chr2 (65-98)||(44635577-44635610)
chr2 (35-87)||(12224277-12224329)
chr2 (36-88)||(14996171-14996222)
chr2 (58-98)||(18622679-18622719)
chr2 (35-98)||(22084758-22084824)
chr2 (38-98)||(34784913-34784973)
[»] scaffold0003 (1 HSPs)
scaffold0003 (35-98)||(241659-241722)
[»] chr6 (38 HSPs)
chr6 (35-98)||(17327592-17327655)
chr6 (35-98)||(34595188-34595251)
chr6 (35-103)||(28152152-28152220)
chr6 (35-98)||(31384984-31385047)
chr6 (38-98)||(8365450-8365510)
chr6 (35-98)||(4877997-4878059)
chr6 (35-98)||(10339056-10339119)
chr6 (35-98)||(16766762-16766825)
chr6 (35-98)||(17841531-17841594)
chr6 (35-97)||(32978842-32978904)
chr6 (41-98)||(8776910-8776967)
chr6 (35-98)||(3209453-3209516)
chr6 (35-98)||(12696383-12696446)
chr6 (35-98)||(28715349-28715412)
chr6 (45-98)||(31959214-31959267)
chr6 (58-98)||(5569826-5569866)
chr6 (35-103)||(7248423-7248491)
chr6 (66-98)||(7723201-7723233)
chr6 (45-97)||(7996325-7996377)
chr6 (45-97)||(8022424-8022476)
chr6 (35-98)||(32839573-32839637)
chr6 (35-98)||(6898223-6898286)
chr6 (58-97)||(8389411-8389450)
chr6 (58-97)||(9025448-9025487)
chr6 (35-98)||(9107301-9107364)
chr6 (63-98)||(10649370-10649405)
chr6 (35-98)||(18367901-18367964)
chr6 (35-98)||(24645535-24645598)
chr6 (64-98)||(426480-426514)
chr6 (64-98)||(5732476-5732510)
chr6 (64-98)||(8805526-8805560)
chr6 (41-98)||(9658939-9658997)
chr6 (35-100)||(5000555-5000620)
chr6 (65-98)||(7938184-7938217)
chr6 (65-98)||(10842617-10842650)
chr6 (65-98)||(13360315-13360348)
chr6 (64-105)||(34446654-34446695)
chr6 (58-98)||(26178620-26178660)
[»] chr3 (41 HSPs)
chr3 (35-98)||(55401129-55401192)
chr3 (16-98)||(27505286-27505368)
chr3 (35-99)||(4987221-4987285)
chr3 (35-98)||(20503519-20503582)
chr3 (35-98)||(40993277-40993340)
chr3 (36-98)||(34185054-34185116)
chr3 (38-98)||(41961581-41961641)
chr3 (35-93)||(3631738-3631796)
chr3 (35-100)||(24204981-24205047)
chr3 (58-98)||(4990914-4990954)
chr3 (35-98)||(10955006-10955072)
chr3 (42-98)||(15999952-16000008)
chr3 (24-98)||(5440969-5441044)
chr3 (35-98)||(14216957-14217020)
chr3 (35-98)||(14223086-14223149)
chr3 (35-98)||(15796225-15796288)
chr3 (35-98)||(35222992-35223055)
chr3 (35-98)||(8789490-8789555)
chr3 (58-100)||(25775584-25775626)
chr3 (40-98)||(28918062-28918120)
chr3 (65-98)||(8842413-8842446)
chr3 (35-100)||(29508504-29508569)
chr3 (49-98)||(40052380-40052429)
chr3 (45-98)||(52369851-52369904)
chr3 (35-87)||(7171555-7171607)
chr3 (58-98)||(14979226-14979266)
chr3 (58-98)||(34910394-34910434)
chr3 (35-98)||(13845467-13845530)
chr3 (35-98)||(18427003-18427066)
chr3 (63-98)||(21861657-21861692)
chr3 (35-94)||(25064972-25065031)
chr3 (35-98)||(26492147-26492210)
chr3 (65-100)||(40150525-40150560)
chr3 (39-98)||(49651718-49651777)
chr3 (64-98)||(11610592-11610626)
chr3 (49-98)||(9800119-9800168)
chr3 (63-96)||(21256952-21256985)
chr3 (58-98)||(1389915-1389955)
chr3 (65-105)||(3163966-3164006)
chr3 (66-98)||(11252061-11252093)
chr3 (35-98)||(15864886-15864949)
[»] chr1 (49 HSPs)
chr1 (35-98)||(1486646-1486709)
chr1 (35-95)||(5898211-5898271)
chr1 (35-98)||(9828109-9828172)
chr1 (35-98)||(16297223-16297286)
chr1 (35-98)||(37598885-37598948)
chr1 (35-98)||(40917814-40917877)
chr1 (35-98)||(47989562-47989625)
chr1 (37-98)||(6427531-6427592)
chr1 (58-98)||(22947807-22947847)
chr1 (35-99)||(42359390-42359454)
chr1 (35-98)||(22515829-22515892)
chr1 (35-98)||(32461395-32461458)
chr1 (35-98)||(38078603-38078666)
chr1 (35-98)||(40258875-40258938)
chr1 (35-98)||(46348325-46348388)
chr1 (35-98)||(18337383-18337446)
chr1 (35-98)||(25934681-25934744)
chr1 (35-86)||(40181925-40181976)
chr1 (64-98)||(35702544-35702578)
chr1 (50-103)||(113362-113415)
chr1 (65-98)||(21365994-21366027)
chr1 (35-100)||(29163321-29163386)
chr1 (58-98)||(7918156-7918196)
chr1 (58-98)||(22881569-22881609)
chr1 (58-98)||(27965942-27965982)
chr1 (35-98)||(1815311-1815374)
chr1 (39-98)||(5944352-5944411)
chr1 (39-98)||(10577677-10577736)
chr1 (35-98)||(18556387-18556450)
chr1 (35-98)||(31015091-31015154)
chr1 (35-98)||(51410079-51410142)
chr1 (64-98)||(2218311-2218345)
chr1 (36-98)||(6414933-6414995)
chr1 (64-98)||(9630563-9630597)
chr1 (64-98)||(15765841-15765875)
chr1 (64-98)||(16812639-16812673)
chr1 (64-98)||(34741929-34741963)
chr1 (64-98)||(36878549-36878583)
chr1 (64-98)||(48415668-48415702)
chr1 (64-98)||(48450552-48450586)
chr1 (45-98)||(17778617-17778670)
chr1 (36-88)||(6612112-6612164)
chr1 (58-98)||(10233333-10233373)
chr1 (38-98)||(12919002-12919062)
chr1 (51-99)||(25452107-25452155)
chr1 (35-95)||(26830641-26830701)
chr1 (66-98)||(29144322-29144354)
chr1 (66-98)||(31694641-31694673)
chr1 (66-98)||(46940750-46940782)
[»] scaffold0652 (1 HSPs)
scaffold0652 (35-98)||(404-467)
[»] chr8 (52 HSPs)
chr8 (35-98)||(16641911-16641974)
chr8 (35-98)||(22652041-22652104)
chr8 (35-98)||(29447041-29447104)
chr8 (35-98)||(29510235-29510298)
chr8 (35-98)||(36450696-36450759)
chr8 (35-92)||(126295-126352)
chr8 (35-96)||(5813646-5813707)
chr8 (35-98)||(3025605-3025668)
chr8 (35-98)||(8343381-8343444)
chr8 (35-98)||(15816060-15816123)
chr8 (35-98)||(21465477-21465540)
chr8 (35-98)||(34450963-34451026)
chr8 (35-97)||(40332245-40332307)
chr8 (35-99)||(926729-926793)
chr8 (40-88)||(22943301-22943349)
chr8 (35-98)||(24413501-24413564)
chr8 (35-98)||(26902106-26902169)
chr8 (35-98)||(27067233-27067294)
chr8 (35-94)||(33405330-33405389)
chr8 (58-100)||(44067604-44067646)
chr8 (57-98)||(16987989-16988030)
chr8 (65-98)||(31514938-31514971)
chr8 (42-98)||(14134760-14134816)
chr8 (58-98)||(17751733-17751773)
chr8 (58-98)||(17760720-17760760)
chr8 (35-95)||(22197676-22197736)
chr8 (58-98)||(34127174-34127214)
chr8 (35-98)||(3951478-3951541)
chr8 (39-98)||(18407777-18407836)
chr8 (35-98)||(24858070-24858133)
chr8 (35-98)||(29447509-29447572)
chr8 (64-95)||(31109463-31109494)
chr8 (35-98)||(43737753-43737816)
chr8 (36-98)||(6065588-6065650)
chr8 (64-98)||(25566913-25566947)
chr8 (64-98)||(39820511-39820545)
chr8 (35-99)||(1676765-1676830)
chr8 (65-98)||(3658237-3658270)
chr8 (65-98)||(11927017-11927050)
chr8 (35-98)||(37283757-37283817)
chr8 (58-98)||(8343044-8343084)
chr8 (51-98)||(9383035-9383083)
chr8 (66-98)||(11803355-11803387)
chr8 (66-98)||(11833935-11833967)
chr8 (35-95)||(12570443-12570503)
chr8 (35-95)||(12570669-12570729)
chr8 (58-98)||(13436912-13436952)
chr8 (42-98)||(18964251-18964307)
chr8 (47-99)||(20679336-20679388)
chr8 (66-98)||(24205750-24205782)
chr8 (36-96)||(25172631-25172691)
chr8 (58-98)||(27213602-27213642)
[»] scaffold0053 (1 HSPs)
scaffold0053 (35-98)||(8852-8915)
[»] scaffold0019 (1 HSPs)
scaffold0019 (35-98)||(71790-71853)
[»] scaffold0050 (1 HSPs)
scaffold0050 (35-97)||(70332-70394)
[»] scaffold0306 (1 HSPs)
scaffold0306 (35-100)||(13460-13525)
[»] scaffold0152 (1 HSPs)
scaffold0152 (35-100)||(21802-21867)
[»] scaffold0007 (1 HSPs)
scaffold0007 (24-100)||(225197-225274)
[»] scaffold0793 (1 HSPs)
scaffold0793 (42-98)||(4823-4879)
[»] scaffold0475 (1 HSPs)
scaffold0475 (35-98)||(3362-3425)
[»] scaffold0361 (1 HSPs)
scaffold0361 (35-98)||(14581-14644)
[»] scaffold0136 (1 HSPs)
scaffold0136 (35-98)||(3780-3843)
[»] scaffold0086 (1 HSPs)
scaffold0086 (41-94)||(2999-3052)
[»] scaffold0027 (1 HSPs)
scaffold0027 (65-98)||(46741-46774)
[»] scaffold0450 (1 HSPs)
scaffold0450 (38-98)||(8566-8626)
[»] scaffold0380 (1 HSPs)
scaffold0380 (42-98)||(8662-8718)
[»] scaffold0103 (1 HSPs)
scaffold0103 (50-98)||(51892-51940)
[»] scaffold0057 (1 HSPs)
scaffold0057 (62-98)||(24117-24153)
[»] scaffold0512 (1 HSPs)
scaffold0512 (35-98)||(4978-5041)
[»] scaffold0036 (1 HSPs)
scaffold0036 (35-98)||(9678-9741)
[»] scaffold0009 (1 HSPs)
scaffold0009 (58-93)||(188477-188512)
[»] scaffold0008 (1 HSPs)
scaffold0008 (35-98)||(263303-263366)
[»] scaffold0199 (1 HSPs)
scaffold0199 (35-99)||(2002-2067)
[»] scaffold0168 (1 HSPs)
scaffold0168 (65-98)||(21243-21276)


Alignment Details
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 16 - 269
Target Start/End: Original strand, 43001840 - 43002095
Alignment:
Q  16 aattactagtgttggtgatgtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgtatatgatgaaggtt 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43001840 aattacaagtgttggtgatgtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgtatatgatgaaggtt 43001939  T
Q  116 ttcgagtgacatatctaaccaaaacaaattaggctaatgcaaagaagaaaatcttttatgaaatatgtaacatttgatatcattagta--atatattaaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  43001940 ttcgagtgacatatctaaccaaaacaaattaggctaatgcaaagaagaaaatcttttatgaaatatgtaacatttgatatcattagtaatatatattaaa 43002039  T
Q  214 ttcccctaaaaaataatacattaaatgctggggtaatattcattttggtcagtgaa 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43002040 ttcccctaaaaaataatacattaaatgctggggtaatattcattttggtcactgaa 43002095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 30098391 - 30098454
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||||| ||||||||||||||    
T  30098391 gtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcat 30098454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 14873577 - 14873639
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||| | ||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  14873577 tgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcat 14873639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 21576749 - 21576687
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||    
T  21576749 tgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcat 21576687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 21191061 - 21190997
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    ||||||||||| |||||||||  || || ||||||||||||||||||||||||||||||||||||    
T  21191061 gtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcatt 21190997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 19579766 - 19579831
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    |||||||||||||||  |||| |||||| |||||||||||||||||||||||| |||| |||||||    
T  19579766 gtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgtacgtgtttcattg 19579831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 21194128 - 21194068
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    |||| ||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||    
T  21194128 gtgttggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctt 21194068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 27932289 - 27932352
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||| ||||||||||||| ||||||||||  |||||||||    
T  27932289 gtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcat 27932352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 31084382 - 31084445
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||  ||||| ||||||||||||||||||||||| |||||    
T  31084382 gtgtcggacacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcat 31084445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 39698606 - 39698669
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| || ||  |||||  ||||||||||||||||||||||||||||||||||    
T  39698606 gtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 39698669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 43564935 - 43564998
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||  || || |||||||||||||||||| ||||||||||||||||    
T  43564935 gtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcat 43564998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 35017110 - 35017160
Alignment:
Q  48 cacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  35017110 cacgtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcat 35017160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 39268603 - 39268541
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    |||| |||||||||| |||||  ||||  ||||||||||||||||||||||||||||||||||    
T  39268603 gtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 22423802 - 22423766
Alignment:
Q  62 ctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||||||||||||||    
T  22423802 ctggacacgcctaatccgaggagtgtccgtgcttcat 22423766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 24238661 - 24238601
Alignment:
Q  40 ggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    |||||||||||||||| |||||  ||||| || |||||| |||||||||||||||||||||    
T  24238661 ggacacgacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcattg 24238601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 3966568 - 3966631
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| ||| ||||| ||||   ||||||| |||||||||||||||||||||||||||    
T  3966568 gtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgcttcat 3966631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 6401563 - 6401626
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||  ||| |||||| |||| |||||||||||||||||||    
T  6401563 gtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcat 6401626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 11686003 - 11686066
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||| || |||  | |||| |||||| ||||||||||||||||||||    
T  11686003 gtgtcggacacgacacgtgtccaaaaccaaggcacggctaatcggaggagtgtccgtgcttcat 11686066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 16304428 - 16304361
Alignment:
Q  38 tcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgtatat 105  Q
    |||||||||||||||| |  |||||  |||||| |||||||||||| |||||||||||||| ||||||    
T  16304428 tcggacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatagtatat 16304361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 21522815 - 21522878
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||   |||| ||||||||||||||| | |||||||||||| ||||    
T  21522815 gtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcat 21522878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 21533381 - 21533444
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||   |||| ||||||||||||||| | |||||||||||| ||||    
T  21533381 gtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcat 21533444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 21542095 - 21542158
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||| ||||||||| ||||| |||| ||||||||| ||||    
T  21542095 gtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcat 21542158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 10298633 - 10298667
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcat 10298667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 17123130 - 17123164
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||||||||||||    
T  17123130 ggacacgcctaatccgaggagtgtccgtgcttcat 17123164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 17593715 - 17593665
Alignment:
Q  48 cacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||| |||||| |||||||| ||||||||||||||||||| ||||||    
T  17593715 cacgtgtccaacaccgggacacgcttaatccgaggagtgtccgtacttcat 17593665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 15382539 - 15382592
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtc 88  Q
    |||| ||||||||||| ||||  ||||| |||||||||||||||||||||||||    
T  15382539 gtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 4105342 - 4105374
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttc 96  Q
    |||||||||||||||||||||||||||||||||    
T  4105342 ggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 17088358 - 17088402
Alignment:
Q  48 cacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtg 92  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 19820370 - 19820330
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  19820370 acaccgggacacgcctaatcagaggagtgtccgtgcttcat 19820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 23015986 - 23015926
Alignment:
Q  38 tcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||| |||||  |||   ||||||||||||||||||||||||||| |||||||    
T  23015986 tcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 26312823 - 26312875
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgt 87  Q
    ||||||||||||| |||||||  ||||| |||||| |||||||||||||||||    
T  26312823 gtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 7677770 - 7677833
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||| ||| ||||  ||||| ||||||||||||||||||||| ||| |||||||||    
T  7677770 gtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcat 7677833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 28588679 - 28588616
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| | ||  ||||| |||||||| |||||||| |||||||| ||||||||    
T  28588679 gtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcat 28588616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 32766937 - 32766874
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||| | ||||||||||||  ||||| ||| ||| |||||| ||||||||||||||||||||    
T  32766937 gtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcat 32766874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 42029806 - 42029869
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| ||||   ||| | ||||||||| ||||||||||||||||||| ||||    
T  42029806 gtgtcggacacgacacatgtctgtcacgtagacacgccttatccgaggagtgtccgtgcatcat 42029869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 42893414 - 42893477
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||| |||||||||  ||||| |||||||||||||  ||||||||||| ||||||||    
T  42893414 gtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcat 42893477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 18592138 - 18592200
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    ||||||||||| |||||||||  ||| | ||||||| ||||| ||| ||||||||||||||||    
T  18592138 gtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 24906288 - 24906254
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||| |||||||||||||||||||||    
T  24906288 ggacacgcctaattcgaggagtgtccgtgcttcat 24906254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 41995547 - 41995581
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||||||||||||||||    
T  41995547 ggacacgcctaatcctaggagtgtccgtgcttcat 41995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 2436995 - 2437028
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||| ||||||||||    
T  2436995 gacacgcctaatccgaggagtgttcgtgcttcat 2437028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 30099043 - 30098982
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttc 96  Q
    |||||||| ||||||||||||  ||||  |||||||||| |||| |||||||| ||||||||    
T  30099043 gtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 36642756 - 36642696
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttc 96  Q
    |||||||||||||||||||||  ||||  |||||||||||||  |||||||||| |||||||    
T  36642756 gtgtcggacacgacacgtgtccgacacg-ggacacgcctaattggaggagtgtcggtgcttc 36642696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 6770621 - 6770653
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||||||||||||||    
T  6770621 acacgcctaatccgaagagtgtccgtgcttcat 6770653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 19552518 - 19552478
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||| ||||||| |||||||||||||||||||||| |||||    
T  19552518 acacttggacacacctaatccgaggagtgtccgtgtttcat 19552478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 38464355 - 38464315
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||| |||||||||||||||||| |||||||||    
T  38464355 acaccgggacacacctaatccgaggagtgtctgtgcttcat 38464315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 5409856 - 5409773
Alignment:
Q  15 caattactagtgttggtgatgtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||| ||||| ||||  |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  5409856 caattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 5409773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 9778540 - 9778622
Alignment:
Q  16 aattactagtgttggtgatgtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||| ||||| ||||  ||||||||||| |||||||||  ||||| ||||||||||||||| |||||||||||||||||||    
T  9778540 aattacaagtgtcggtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcat 9778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 598262 - 598325
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||    
T  598262 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 598325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 21880206 - 21880269
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| ||||  ||||| |||||||||||||||||| ||||||||||||||||    
T  21880206 gtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcat 21880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 24339707 - 24339770
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||| ||  ||||| ||||||||||||||||||||||| |||||||||||    
T  24339707 gtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcat 24339770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 43027469 - 43027406
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||| |||||||||||||||||    
T  43027469 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcat 43027406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 29763187 - 29763131
Alignment:
Q  42 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||  ||| | |||||||||||||||||||||||||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcat 29763131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 32094020 - 32093956
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctgg-acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||| || |||||||||||||||||||||| ||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcat 32093956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 1433513 - 1433576
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||| |||| |||||  ||||| ||||||| |||||||||||||||||||||||||||    
T  1433513 gtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcat 1433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 15680863 - 15680926
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  |||||  |||||| ||||| |||||||||||||||||||||    
T  15680863 gtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcat 15680926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 32287468 - 32287405
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||| |||| |||||  ||||| |||||| ||||||||||||||||||||||||||||    
T  32287468 gtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 32287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 21864863 - 21864925
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||  ||||| ||||||| ||||| ||||||||||| |||||||||    
T  21864863 tgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcat 21864925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 13770750 - 13770810
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    ||||||||||| |||||||||  ||||| | ||||||||||||||| ||||||||||||||    
T  13770750 gtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 17852056 - 17852123
Alignment:
Q  37 gtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgtata 104  Q
    |||||||| ||||||||||  |||||  ||||| |||||| ||||||||||||||||||||| |||||    
T  17852056 gtcggacatgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatagtata 17852123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 22868108 - 22868166
Alignment:
Q  42 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    |||| |||||||||| ||||| |||||| | ||||||||||||||||| ||||||||||    
T  22868108 acacaacacgtgtcagacaccgggacacacataatccgaggagtgtccatgcttcattg 22868166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 35862034 - 35862068
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgcttcat 35862068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 28973917 - 28973868
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcattgtatatgatgaagg 113  Q
    ||||||||||||||||||| ||||||||||||||| | || |||||||||    
T  28973917 ggacacgcctaatccgaggtgtgtccgtgcttcatagcatgtgatgaagg 28973868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 6490793 - 6490833
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  6490793 acaccgggacacgcttaatccgaggagtgtccgtgcttcat 6490833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 30813882 - 30813914
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||||||||||    
T  30813882 acacgcctaatccgaggagtgtccgtgcttcat 30813914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 3294300 - 3294257
Alignment:
Q  44 acgacacgtgtcaaacacctggacacgcctaatccgaggagtgt 87  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||    
T  3294300 acgacacgtgtccaacaccgggacacgcctaatccgaagagtgt 3294257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 8842321 - 8842282
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  8842321 acaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 33994266 - 33994329
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||| |||| ||||||  |||||||||||||| |||||||| |||| |||||    
T  33994266 gtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcat 33994329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 43250059 - 43250118
Alignment:
Q  37 gtcggacac-gacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    ||||||||| ||| ||||||  ||||| ||||||||||||| ||||||||||||||||||    
T  43250059 gtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 3991396 - 3991430
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||| |||||||    
T  3991396 ggacacgcctaatccgaggagtgtccgggcttcat 3991430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 14729770 - 14729820
Alignment:
Q  48 cacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||  ||||| |||||||| ||||||||||||||||||| ||||||    
T  14729770 cacgtgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcat 14729820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 29812634 - 29812600
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||| ||||||||||||||||    
T  29812634 ggacacgcctaatccgagaagtgtccgtgcttcat 29812600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 40287344 - 40287306
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttc 96  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  40287344 acaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 19213881 - 19213910
Alignment:
Q  69 cgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||||||    
T  19213881 cgcctaatccgaggagtgtccgtgcttcat 19213910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 20549875 - 20549908
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||| |||||||||||    
T  20549875 gacacgcctaatccgaggagtgcccgtgcttcat 20549908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 26033455 - 26033390
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    ||||| |||| ||||||||||  | |||  ||||| |||||||||||||||||||||| |||||||    
T  26033455 gtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcattg 26033390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 18035839 - 18035807
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||||||||||||||    
T  18035839 acacgtctaatccgaggagtgtccgtgcttcat 18035807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 25822723 - 25822783
Alignment:
Q  38 tcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||  ||| | ||||| ||||||||  ||||||||||||| |||||    
T  25822723 tcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcat 25822783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 28155631 - 28155671
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||||||||||| |||| ||||||||||||||    
T  28155631 acaccaggacacgcctaatccaaggaatgtccgtgcttcat 28155671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 92876 - 92939
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||    
T  92876 gtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcat 92939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 7e-21; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 23292991 - 23292928
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  23292991 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 23292928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 3947766 - 3947703
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcat 3947703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 49431080 - 49431140
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||    
T  49431080 gtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctt 49431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 36635384 - 36635447
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||    
T  36635384 gtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcat 36635447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 848016 - 848079
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||| ||||||| |||||| |||||| |||||||| ||||||||||||| |||||    
T  848016 gtgtcggacacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgtttcat 848079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 24613695 - 24613632
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||  ||||| ||||||| ||||||| |||||||||||||||||||    
T  24613695 gtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcat 24613632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 30982872 - 30982809
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||| | |||||||||||||||||    
T  30982872 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcat 30982809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 715603 - 715547
Alignment:
Q  42 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||| ||||  ||||  |||||||||||||||||||||||||||||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 715547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 752929 - 752873
Alignment:
Q  42 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||| ||||  ||||  |||||||||||||||||||||||||||||||||||    
T  752929 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 752873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 12895279 - 12895207
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgtatatga 107  Q
    ||||||||||||||| || ||  ||| | |||||||||||||||||||||||| |||||||||| | ||||||    
T  12895279 gtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatagcatatga 12895207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 28964254 - 28964190
Alignment:
Q  34 tgtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||| | ||  ||||  |||||||||||||||||||||||||| ||||||||    
T  28964254 tgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcat 28964190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 30838275 - 30838335
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    ||||||||| |||||||||||  |||||  ||||||||||| |||||||||||||||||||    
T  30838275 gtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 5414166 - 5414103
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||  |||||| ||| |||| |||||||||||||||||||    
T  5414166 gtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcat 5414103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 99
Target Start/End: Complemental strand, 22440593 - 22440558
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    ||||||||||||||||||||||||||||||||||||    
T  22440593 ggacacgcctaatccgaggagtgtccgtgcttcatt 22440558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  46 gacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    ||||||||||  ||||  ||||||||||||||||||||||||||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 34306809 - 34306746
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  |||||  ||||||||||||| ||||| ||| ||||||||||    
T  34306809 gtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcat 34306746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 35157990 - 35157927
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||| |||| |||||| | |||||| ||||||||| ||||||||||||||||    
T  35157990 gtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcat 35157927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 4383449 - 4383483
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||||||||||||    
T  4383449 ggacacgcctaatccgaggagtgtccgtgcttcat 4383483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 5775340 - 5775306
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||||||||||||    
T  5775340 ggacacgcctaatccgaggagtgtccgtgcttcat 5775306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 19482738 - 19482796
Alignment:
Q  40 ggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||  ||||  |||||| ||||||||||||||||| ||||||||||    
T  19482738 ggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcat 19482796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 29205527 - 29205585
Alignment:
Q  40 ggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| ||||  ||||  |||||||||||||||||||||||| ||||||||||    
T  29205527 ggacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcat 29205585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 3064903 - 3064870
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||||||||||    
T  3064903 gacacgcctaatccgaggagtgtccgtgcttcat 3064870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 18513242 - 18513177
Alignment:
Q  34 tgtgtcggacac-gacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||| |||  |||||  ||||| |||||||||||||| ||||||||||||||||||||    
T  18513242 tgtgtcggacaccgacgtgtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcat 18513177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 35161092 - 35161153
Alignment:
Q  37 gtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||  ||||| | |||| ||||||||||  ||||||||||||||||    
T  35161092 gtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcat 35161153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 40784030 - 40784070
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  40784030 acaccgggacacacctaatccgaggagtgtccgtgcttcat 40784070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 42640589 - 42640641
Alignment:
Q  46 gacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||   |||| |||||||||||||||||||||| ||||||||||||    
T  42640589 gacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcat 42640641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 53381572 - 53381532
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  53381572 acaccgggacacacctaatccgaggagtgtccgtgcttcat 53381532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 2361980 - 2361917
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||| ||||||  |||||  ||||| ||||||| || |||||||||||||||||    
T  2361980 gtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcat 2361917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 8423723 - 8423660
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||  ||||  ||||| |||||||||||||| ||| ||||||||||| ||||    
T  8423723 gtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcat 8423660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 14465070 - 14465007
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||||||||||   ||||  ||||||| |||||| ||||||||||||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcat 14465007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 15724548 - 15724485
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| |||||||||| |||||   |||||||||||||||||||| |  |||||||||    
T  15724548 gtgtcggacacaacacgtgtcagacaccaaaacacgcctaatccgaggagtttatgtgcttcat 15724485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 16073448 - 16073511
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||| || ||||  ||||   ||||||||||||||||||||||||| ||||||||    
T  16073448 gtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcat 16073511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 17425396 - 17425349
Alignment:
Q  51 gtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||| ||||  ||||||||||||||||||||||||| |||||||||    
T  17425396 gtgtcagacacaaggacacgcctaatccgaggagtgtctgtgcttcat 17425349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 22234884 - 22234821
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||  ||||| ||||||  |||||||||| ||||| ||||||||||    
T  22234884 gtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcat 22234821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 4157203 - 4157269
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgt 101  Q
    |||||||||||||||| ||||  |||||  || || |||||| ||||||||||| ||||||||||||    
T  4157203 gtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcattgt 4157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 4157490 - 4157556
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgt 101  Q
    |||||||||||||||| ||||  |||||  || ||||||||| |||||||||||  |||||||||||    
T  4157490 gtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcattgt 4157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 11596333 - 11596299
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||| ||||||||||||||||||||    
T  11596333 ggacacgcctaatctgaggagtgtccgtgcttcat 11596299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 18844459 - 18844425
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||| ||||||||||||||||    
T  18844459 ggacacgcctaatccgagaagtgtccgtgcttcat 18844425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 28470448 - 28470482
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||||||||||||||||    
T  28470448 ggacatgcctaatccgaggagtgtccgtgcttcat 28470482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 30299012 - 30299046
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||| |||||||||||||||||||||||||||    
T  30299012 ggacacgtctaatccgaggagtgtccgtgcttcat 30299046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 30327880 - 30327914
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||| |||||||||||||||||||||||||||    
T  30327880 ggacacgtctaatccgaggagtgtccgtgcttcat 30327914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 24343577 - 24343630
Alignment:
Q  45 cgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||| ||||||  ||||| ||||||||||| || ||||||||||||||||||||    
T  24343577 cgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcat 24343630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 35239199 - 35239236
Alignment:
Q  61 cctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  35239199 cctggacacgtctaatccgaggagtgtccgtgcctcat 35239236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 10499261 - 10499229
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||| ||||||||||||||    
T  10499261 acacgcctaatccgaggattgtccgtgcttcat 10499229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 12708227 - 12708259
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||| |||||||||||||    
T  12708227 acacgcctaatccgaggagcgtccgtgcttcat 12708259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 12797343 - 12797271
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgtatatga 107  Q
    ||||||||||||| || ||||  ||||| ||||| | |||||||||||| ||| |||||||| | ||||||||    
T  12797343 gtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttcgtagtatatga 12797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 27706170 - 27706110
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttc 96  Q
    ||||||||||||||||| ||  | ||| |||||||||||||| ||||| ||| ||||||||    
T  27706170 tgtcggacacgacacgtatccgataccgggacacgcctaatctgaggaatgtacgtgcttc 27706110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 30094090 - 30094126
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgct 94  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  30094090 acaccgggacacgcctaatccgaagagtgtccgtgct 30094126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 37203329 - 37203369
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||| |||||||||| ||||||||||||||||    
T  37203329 acaccgggacacgtctaatccgagaagtgtccgtgcttcat 37203369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 2438724 - 2438660
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    |||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  2438724 gtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatt 2438660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 26769579 - 26769639
Alignment:
Q  38 tcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||    
T  26769579 tcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcat 26769639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 28596523 - 28596586
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||  |||||| ||||||||||||||||||||||||||||    
T  28596523 gtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcat 28596586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 37419808 - 37419871
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||  ||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  37419808 gtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 37419871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 38117164 - 38117101
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| |||||||||  ||||| ||||||||||||||||||| |||||||||||||||    
T  38117164 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcat 38117101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 19942319 - 19942383
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    |||||||||||| || |||||  ||||| |||||||||||||||||||||||||| |||||||||    
T  19942319 gtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcatt 19942383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 11223857 - 11223795
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| ||||  ||||| |||||||||||||| ||||||||||||||||||||    
T  11223857 gtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 11223795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 18841018 - 18840955
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||| ||||  ||||| |||||| ||||||||||||||||||||||||||||    
T  18841018 gtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 18840955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 24009349 - 24009412
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||  |||||||||| |||| |||||||||||||||||||    
T  24009349 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 24009412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 27084323 - 27084386
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||  ||||||||    
T  27084323 gtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcat 27084386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 42511387 - 42511324
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| |||||||||  ||||  ||||||| |||||||||||||||||||||||||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcat 42511324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 21782801 - 21782741
Alignment:
Q  43 cacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgtat 103  Q
    ||||||||||||| |||||| ||||||| |||||| | |||||||||||||||||| ||||    
T  21782801 cacgacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatagtat 21782741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 15657930 - 15657993
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    |||||||| |||||||||||  || || ||||||||||| |||||||||||||| |||||||||    
T  15657930 tgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcatt 15657993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 15972927 - 15972990
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  || || |||||| |||||||||| || ||||||||||||||    
T  15972927 gtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcat 15972990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 35056933 - 35056996
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||    |||||||||||| ||||||||||||||||||||    
T  35056933 gtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcat 35056996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 37559031 - 37559094
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||  ||||||||||  ||||| | |||||| ||||||||||||||||||||||||||    
T  37559031 gtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcat 37559094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 30717523 - 30717461
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||   ||||  ||| ||||||||||| |||||||||||||||||||    
T  30717523 tgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcat 30717461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 41843489 - 41843563
Alignment:
Q  24 gtgttggtgatgtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||| |||| |||||||||| |||||||||||  ||||  |||||||| | |||||||||||||| |||||||||    
T  41843489 gtgtcggtgttgtgtcggacgcgacacgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcat 41843563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 10535727 - 10535687
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  10535727 acaccaggacacgcctaatccgaggagtgttcgtgcttcat 10535687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 20242732 - 20242669
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| |||||||||  ||||  |||||||||| |||||| ||||||| |||||||||    
T  20242732 gtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcat 20242669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 98
Target Start/End: Original strand, 39323316 - 39323355
Alignment:
Q  59 cacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  39323316 cacctggacaggcctaatctgaggagtgtccgtgcttcat 39323355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 44860385 - 44860448
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||| |||||||||| |||||  ||| | |||||| |||||| |||||||||||||||||||||    
T  44860385 gtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcat 44860448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 3444862 - 3444828
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||||||||||||||||    
T  3444862 ggacatgcctaatccgaggagtgtccgtgcttcat 3444828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 18255980 - 18255946
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||||||||||||||||    
T  18255980 ggacacgcctaatccaaggagtgtccgtgcttcat 18255946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 19536397 - 19536363
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||| ||||||||    
T  19536397 ggacacgcctaatccgaggagtgtccatgcttcat 19536363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 23354617 - 23354583
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||||| |||||    
T  23354617 ggacacgcctaatccgaggagtgtccgtggttcat 23354583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 23354960 - 23354926
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||| ||||||||    
T  23354960 ggacacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 34221499 - 34221465
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||| ||||||||||||    
T  34221499 ggacacgcctaatccgaggagtttccgtgcttcat 34221465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 34691805 - 34691771
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||||| |||||    
T  34691805 ggacacgcctaatccgaggagtgtccgtgtttcat 34691771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 34714217 - 34714183
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||||| |||||    
T  34714217 ggacacgcctaatccgaggagtgtccgtgtttcat 34714183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 36096368 - 36096306
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||  ||||  |||||||||| | || | |||||||||||||||||    
T  36096368 tgtcggacacgacacgtgtctgacacggggacacgccttaaccaaagagtgtccgtgcttcat 36096306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 5040788 - 5040845
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtg 92  Q
    ||||||||||||||| |||||  || || ||||||||||| ||| |||||||||||||    
T  5040788 gtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtccgtg 5040845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 17776681 - 17776714
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    ||||| ||||||||||||||||||||||||||||    
T  17776681 ggacaggcctaatccgaggagtgtccgtgcttca 17776714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 20539667 - 20539634
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||| ||||||||||||||||||||||||    
T  20539667 gacacgcctgatccgaggagtgtccgtgcttcat 20539634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 23058426 - 23058389
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  23058426 acaccgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 44635577 - 44635610
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||| ||||||||||||||||||||    
T  44635577 gacacgcctaatctgaggagtgtccgtgcttcat 44635610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 12224277 - 12224329
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgt 87  Q
    ||||||||||||| |||||||  ||||  ||||||||||||||| ||||||||    
T  12224277 gtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgt 12224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 14996222 - 14996171
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtc 88  Q
    |||||||||| |||||||||  ||||| | |||||||||||||||||||||||    
T  14996222 tgtcggacac-acacgtgtctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 18622679 - 18622719
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||| | ||||||||||||||||||||||||||    
T  18622679 acaccgggacacacttaatccgaggagtgtccgtgcttcat 18622719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 22084824 - 22084758
Alignment:
Q  35 gtgtcggacacgacacgtgtc---aaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| |||||||||    | |||| ||||||||||||||||| ||||||| |||||||||    
T  22084824 gtgtcggacacaacacgtgtctgacaccaccgggacacgcctaatccgatgagtgtctgtgcttcat 22084758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 34784973 - 34784913
Alignment:
Q  38 tcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||| ||||  ||||  |||||||||| || ||||||||||| |||||||||    
T  34784973 tcggacacgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcat 34784913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 241659 - 241722
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||    
T  241659 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 241722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 17327655 - 17327592
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||    
T  17327655 gtgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcat 17327592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 34595188 - 34595251
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||||||||||    
T  34595188 gtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcat 34595251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 28152152 - 28152220
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgtat 103  Q
    |||||||||||||||||||||  ||||| ||||| |||||||||||||||||| |||||||||| ||||    
T  28152152 gtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatagtat 28152220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 31384984 - 31385047
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||| ||||||||||||||||  ||||| ||||||||||||||| |||||||||||||||||||    
T  31384984 gtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcat 31385047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 8365510 - 8365450
Alignment:
Q  38 tcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||  ||||  |||||||||||||||||||||| ||||||||||||    
T  8365510 tcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcat 8365450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 4877997 - 4878059
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||||||||    
T  4877997 gtgtcggacacgacacatgtccgacaca-ggacacgcctaatccgaggagtgtccgtgcttcat 4878059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 10339119 - 10339056
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| ||||  ||||  |||||||||||||| ||||||||||||||||||||    
T  10339119 gtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 10339056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 16766762 - 16766825
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| |||||||||  ||||| ||||||||||||||||| || ||||||||||||||    
T  16766762 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcat 16766825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 17841594 - 17841531
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||  ||||   ||||||||||||||||||||||||||||||||||    
T  17841594 gtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcat 17841531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 32978904 - 32978842
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    |||||||||||||||| ||||  ||||| ||||||| ||||||| ||||||||||||||||||    
T  32978904 gtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 8776967 - 8776910
Alignment:
Q  41 gacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||  |||||  ||||| ||||||||||||||||||||||||||||    
T  8776967 gacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcat 8776910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 3209453 - 3209516
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||| |||||||||| |||  ||||| ||||||||||||||||||||||||  |||||||||    
T  3209453 gtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcat 3209516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 12696383 - 12696446
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||| |||||| ||| |||| ||||||||| |||||||||    
T  12696383 gtgtcggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 28715349 - 28715412
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||   ||||| ||||||||||||| |||| ||||| ||||||||||    
T  28715349 gtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcat 28715412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 31959214 - 31959267
Alignment:
Q  45 cgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||  ||||| |||||| ||||||||||||||||||||||||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 31959267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 5569826 - 5569866
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  5569826 acacctgaacacgcctaatctgaggagtgtccgtgcttcat 5569866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 7248423 - 7248491
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgtat 103  Q
    |||| |||||| ||| |||||  ||||| ||||||| | ||||||||||||||||||||||||| ||||    
T  7248423 gtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatagtat 7248491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 7723233 - 7723201
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgcttcat 7723201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 7996377 - 7996325
Alignment:
Q  45 cgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    ||||||||||| |||||  ||||||||||||||| |||||| |||||||||||    
T  7996377 cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 7996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 8022424 - 8022476
Alignment:
Q  45 cgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    ||||||||||| |||||  ||||||||||||||| |||||| |||||||||||    
T  8022424 cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 8022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 32839637 - 32839573
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaaca-cctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||| |||| ||||| |||| || |||||||||||||||||| |||||| |||||||||    
T  32839637 gtgtcggacaagacatgtgtctaacaaccgggacacgcctaatccgagaagtgtctgtgcttcat 32839573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 6898286 - 6898223
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||  |||||| ||||||   ||||||||||||||| |||||| ||||||||||    
T  6898286 gtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcat 6898223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 8389450 - 8389411
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  8389450 acaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 9025487 - 9025448
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  9025487 acaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 9107364 - 9107301
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| ||  |||||  ||||| |||||| |||||||||||||||| |||||||||||    
T  9107364 gtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcat 9107301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 10649370 - 10649405
Alignment:
Q  63 tggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| |||||||||||||||||||    
T  10649370 tggacacgcctaatccaaggagtgtccgtgcttcat 10649405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 18367901 - 18367964
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||| ||||  ||||  |||||||||| |||| |||||||||||||||||||    
T  18367901 gtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 18367964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 24645535 - 24645598
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||  |||||  |||||| ||||||||| ||||||| |||||||||    
T  24645535 gtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcat 24645598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 426514 - 426480
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||| ||||||||||||||||||||    
T  426514 ggacacgcctaatctgaggagtgtccgtgcttcat 426480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 5732510 - 5732476
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||| ||||||||    
T  5732510 ggacacgcctaatccgaggagtgtccatgcttcat 5732476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 8805560 - 8805526
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||||||||||||||||    
T  8805560 ggacatgcctaatccgaggagtgtccgtgcttcat 8805526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 9658939 - 9658997
Alignment:
Q  41 gacacgacacgtgtcaaacacctggacacgcctaa-tccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||  ||||| | |||||||||| ||| |||||||||||||||||||    
T  9658939 gacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcat 9658997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 5000620 - 5000555
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    ||||| |||||||||| | ||  ||||| ||||||| ||||||||| |||||| ||||||||||||    
T  5000620 gtgtcagacacgacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcattg 5000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 7938184 - 7938217
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||| ||||||||||||||||||||||||    
T  7938184 gacacgcctgatccgaggagtgtccgtgcttcat 7938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 10842617 - 10842650
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||| |||||||||||||||||||||||||||    
T  10842617 gacacggctaatccgaggagtgtccgtgcttcat 10842650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 13360348 - 13360315
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| |||||||||||||||||    
T  13360348 gacacgcctaatccgaagagtgtccgtgcttcat 13360315  T

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Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 34446654 - 34446695
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcattgtatat 105  Q
    |||||| |||||||| ||||||||||||||||||| ||||||    
T  34446654 ggacacacctaatccaaggagtgtccgtgcttcatagtatat 34446695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 26178660 - 26178620
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||| |||||||||| |||||||||    
T  26178660 acaccgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

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Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 55401129 - 55401192
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  |||||  ||||||||||||||||||||||||||||||||||    
T  55401129 gtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 55401192  T

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Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 27505286 - 27505368
Alignment:
Q  16 aattactagtgttggtgatgtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||| ||||| ||||  ||||| |||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||||    
T  27505286 aattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcat 27505368  T

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Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 4987285 - 4987221
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    |||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||||    
T  4987285 gtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcatt 4987221  T

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Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 20503519 - 20503582
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||| ||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||||    
T  20503519 gtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 20503582  T

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Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 40993340 - 40993277
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| ||||  ||||| |||||||||||||||||||||||||| ||||||||    
T  40993340 gtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcat 40993277  T

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Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 34185116 - 34185054
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||| |||| |||||  ||||| |||||||||||||||||||||||||||||||||||    
T  34185116 tgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 34185054  T

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Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 41961641 - 41961581
Alignment:
Q  38 tcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||  ||||  |||||||||||||||||| ||||||||||||||||    
T  41961641 tcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcat 41961581  T

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Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 3631738 - 3631796
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgc 93  Q
    |||||||||||||||| ||||  ||||| ||||||||||| ||||||||||||||||||    
T  3631738 gtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 24205047 - 24204981
Alignment:
Q  35 gtgtcggacac-gacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    ||||||||||| ||| ||||||  ||||| ||||||||||||| |||||||||||||||||||||||    
T  24205047 gtgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcattg 24204981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 4990954 - 4990914
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  4990954 acacgtggacacgcctaatccgaggagtgtccgtgcttcat 4990914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 10955006 - 10955072
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgagg---agtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||   ||||||||||||||||    
T  10955006 gtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcat 10955072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 16000008 - 15999952
Alignment:
Q  42 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||||||||||| ||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcat 15999952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 5441044 - 5440969
Alignment:
Q  24 gtgttggtgatgtgtcggacacgacacgtgtcaaacacctggacacg-cctaatccgaggagtgtccgtgcttcat 98  Q
    |||| |||| |||||| |||||||||| |||| ||||||  |||||| |||||| |||||||||||||||||||||    
T  5441044 gtgtcggtgttgtgtcagacacgacacatgtccaacaccgagacacggcctaattcgaggagtgtccgtgcttcat 5440969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 14216957 - 14217020
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||   ||||  |||||| ||||||||||| ||||||||||||||||    
T  14216957 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcat 14217020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 14223086 - 14223149
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||   ||||  |||||| ||||||||||| ||||||||||||||||    
T  14223086 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcat 14223149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 15796288 - 15796225
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| ||||||||| |||||| | ||||||||||||| | |||||| ||||||||||    
T  15796288 gtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcat 15796225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 35222992 - 35223055
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||| ||||||||||  ||||  |||||||| | ||||||||||||||||||||||||    
T  35222992 gtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcat 35223055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 8789555 - 8789490
Alignment:
Q  35 gtgtcggacacgacacg--tgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||   ||||  |||||  ||||||||||||||||||||||||||||||||||    
T  8789555 gtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcat 8789490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 25775584 - 25775626
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  25775584 acaccaggacacgcctaatccgaggagtgttcgtgcttcattg 25775626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 28918062 - 28918120
Alignment:
Q  40 ggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||  ||||  ||||||||||||||| |||||||||| ||||||||    
T  28918062 ggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 8842413 - 8842446
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||||||||||    
T  8842413 gacacgcctaatccgaggagtgtccgtgcttcat 8842446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 29508504 - 29508569
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    ||||||||||||||||  |||  ||||| ||||||| ||||||| || ||||||||||||||||||    
T  29508504 gtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcattg 29508569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 40052380 - 40052429
Alignment:
Q  49 acgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||  ||||| |||||||||||||||||||||||| ||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcat 40052429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 52369851 - 52369904
Alignment:
Q  45 cgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||| |||||| |||||| |||||| |||| |||||||||||||||||||||||    
T  52369851 cgacgcgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttcat 52369904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 7171555 - 7171607
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgt 87  Q
    |||||||||||||||||||||  |||||  |||||||||||||| ||||||||    
T  7171555 gtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 14979226 - 14979266
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  14979226 acaccgggacacgcctaacccgaggagtgtccgtgcttcat 14979266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 34910394 - 34910434
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  34910394 acaccgggacacgtctaatccgaggagtgtccgtgcttcat 34910434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 13845530 - 13845467
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||| |||||||  ||||   ||||||||| |||| |||||||||||||||||||    
T  13845530 gtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcat 13845467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 18427003 - 18427066
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||| ||||||||||||   |||| |||||| ||||||| |||||||||||||| |||||    
T  18427003 gtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcat 18427066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 21861657 - 21861692
Alignment:
Q  63 tggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21861657 tggacacacctaatccgaggagtgtccgtgcttcat 21861692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 25064972 - 25065031
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgct 94  Q
    |||||||||||||||||||||  ||||| |||||||  | ||||||||||||| ||||||    
T  25064972 gtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagtgttcgtgct 25065031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 26492210 - 26492147
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| ||||  |||||  |||||| |||||||||||| |||||| |||||||    
T  26492210 gtgtcggacacgacacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcat 26492147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 40150560 - 40150525
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    ||||| ||||||||||||||||||||||||||||||    
T  40150560 gacacacctaatccgaggagtgtccgtgcttcattg 40150525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 49651777 - 49651718
Alignment:
Q  39 cggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||| | ||  ||||| |||||| ||||||||||| ||||||||||||||||    
T  49651777 cggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcat 49651718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 11610592 - 11610626
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||| ||||||||||||||||||||    
T  11610592 ggacacgcctaatctgaggagtgtccgtgcttcat 11610626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 9800119 - 9800168
Alignment:
Q  49 acgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||  |||||||||||||||||||| |||| || ||||||||||||    
T  9800119 acgtgtcggacacctggacacgcctaatcggaggcgtttccgtgcttcat 9800168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 21256985 - 21256952
Alignment:
Q  63 tggacacgcctaatccgaggagtgtccgtgcttc 96  Q
    ||||||| ||||||||||||||||||||||||||    
T  21256985 tggacacacctaatccgaggagtgtccgtgcttc 21256952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 1389915 - 1389955
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||| ||||||||| |||||||||||||||||||    
T  1389915 acaccaggacatgcctaatccaaggagtgtccgtgcttcat 1389955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 3164006 - 3163966
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcattgtatat 105  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  3164006 gacacgcctaattcgaggagtgtccatgcttcatagtatat 3163966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 11252061 - 11252093
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||| |||||||||    
T  11252061 acacgcctaatccgaggagtgtctgtgcttcat 11252093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 15864886 - 15864949
Alignment:
Q  35 gtgtcggacac-gacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| ||||||||||  ||||  ||||||||||||||| | |||||||||||||||||    
T  15864886 gtgtcggacaccgacacgtgtctgacacg-ggacacgcctaatccaaagagtgtccgtgcttcat 15864949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 1486709 - 1486646
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||    
T  1486709 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 5898271 - 5898211
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    ||||| ||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  5898271 gtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctt 5898211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 9828109 - 9828172
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||  ||||| ||||||| |||||||||||||||||||||||||||    
T  9828109 gtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcat 9828172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 16297286 - 16297223
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||  |||||  ||||| |||||||||||||||||||||||||||||||||||    
T  16297286 gtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 37598885 - 37598948
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  |||   |||||||||||||||||||||||||||||||||||    
T  37598885 gtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcat 37598948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 40917814 - 40917877
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||| ||||||||||||||||  ||||| |||||||||||||||||||| ||||||||||||||    
T  40917814 gtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcat 40917877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 47989562 - 47989625
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| ||||  ||| | |||||||||||||||||||||||||||||||||||    
T  47989562 gtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcat 47989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 6427531 - 6427592
Alignment:
Q  37 gtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||  ||||| |||||||||||||| || |||||||||||||||||    
T  6427531 gtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcat 6427592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 22947807 - 22947847
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22947807 acacctggacacgcctaatccgaggagtgtccgtgcttcat 22947847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 42359454 - 42359390
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    |||||||||| |||  |||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  42359454 gtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatt 42359390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 22515892 - 22515829
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| | ||  |||||  ||||||||||||||||||||||||||||||||||    
T  22515892 gtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 22515829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 32461458 - 32461395
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| || ||||||||||||||||    
T  32461458 gtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcat 32461395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 38078666 - 38078603
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| |||  |||||| |||||||||||||||||||||| | ||||||||||    
T  38078666 gtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcat 38078603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 40258938 - 40258875
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||| ||||  ||||| |||||||||||||||||||||||||| ||||||||    
T  40258938 gtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcat 40258875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 46348388 - 46348325
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  |||||  ||||||||| |||||||| |||||||||||||||    
T  46348388 gtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcat 46348325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 18337383 - 18337446
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| |||||||||  ||||  ||||| |||| ||||||||||||||||||||||||    
T  18337383 gtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcat 18337446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 25934681 - 25934744
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||  ||| |||||| |||| |||||||||||||||||||    
T  25934681 gtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcat 25934744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 40181925 - 40181976
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtg 86  Q
    ||||||||||| |||||||||  ||||| |||||||||||||||||||||||    
T  40181925 gtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 35702578 - 35702544
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||||||||||||||    
T  35702578 ggacacgcctaatccgaggagtgtccgtgcttcat 35702544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 113362 - 113415
Alignment:
Q  50 cgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattgtat 103  Q
    |||||| |||||| ||||||||||||||||||||||| || |||||||| ||||    
T  113362 cgtgtccaacaccgggacacgcctaatccgaggagtgcccatgcttcatagtat 113415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 21366027 - 21365994
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||||||||||    
T  21366027 gacacgcctaatccgaggagtgtccgtgcttcat 21365994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 29163386 - 29163321
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    ||||||||||||||||||| |  ||||| ||||||| |||||| ||| ||||| ||||||||||||    
T  29163386 gtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcattg 29163321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 7918196 - 7918156
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  7918196 acaccaggacacacctaatccgaggagtgtccgtgcttcat 7918156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 22881609 - 22881569
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  22881609 acaccgggacacgtctaatccgaggagtgtccgtgcttcat 22881569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 27965982 - 27965942
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  27965982 acaccgggacacgcctaatccgaggagtgtccatgcttcat 27965942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 1815311 - 1815374
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||| ||||  ||||| |||||||||||||| |||||||| ||||| |||||    
T  1815311 gtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcat 1815374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 5944352 - 5944411
Alignment:
Q  39 cggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||| |||| ||||  ||||| ||| |||||||||||||||||||| ||||||||||    
T  5944352 cggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcat 5944411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 10577736 - 10577677
Alignment:
Q  39 cggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||| ||||||  ||||  |||||||||| |||| |||||||||||||||||||    
T  10577736 cggacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 10577677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 18556450 - 18556387
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||| |||||||| ||  ||||  |||||||||||||||||| ||||||||||||||||    
T  18556450 gtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcat 18556387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 31015091 - 31015154
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||| | ||||||||||||||| |||||  || |||||||||    
T  31015091 gtgtcggacacgacacgtgtctgacatcgggacacgcctaatccaaggaggatcagtgcttcat 31015154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 51410079 - 51410142
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||| ||  |||||  |||||||||||||| |||||| | ||||||||||    
T  51410079 gtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcat 51410142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 2218311 - 2218345
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||| ||||||||||||||||||||    
T  2218311 ggacacgcctaatctgaggagtgtccgtgcttcat 2218345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 6414995 - 6414933
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||  |||||  |||||   | ||||||||||||||||||||||||    
T  6414995 tgtcggacacgacacgtgtctgacaccgcgacacatttcatccgaggagtgtccgtgcttcat 6414933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 9630597 - 9630563
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||||| ||||||||||    
T  9630597 ggacacgcctaatccgaggagtgttcgtgcttcat 9630563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 15765841 - 15765875
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||| |||||||||||||||||    
T  15765841 ggacacgcctaatccgaagagtgtccgtgcttcat 15765875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 16812639 - 16812673
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||| ||||||||||||||||||||    
T  16812639 ggacacgcctaatctgaggagtgtccgtgcttcat 16812673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 34741929 - 34741963
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||| |||||||||||||||||    
T  34741929 ggacacgcctaatccgaagagtgtccgtgcttcat 34741963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 36878549 - 36878583
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||||||||||||||||    
T  36878549 ggacacgcctaatcccaggagtgtccgtgcttcat 36878583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 48415702 - 48415668
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||||||||||||||||    
T  48415702 ggacacgcctaatccaaggagtgtccgtgcttcat 48415668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 48450586 - 48450552
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||| |||||||||||||||||||||||||||    
T  48450586 ggacacgtctaatccgaggagtgtccgtgcttcat 48450552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 17778617 - 17778670
Alignment:
Q  45 cgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||  ||||| ||||| |||||||||||| ||||| ||||||||||    
T  17778617 cgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 6612164 - 6612112
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtc 88  Q
    |||||||||||| | |||||  ||||| ||||||||||||||| |||||||||    
T  6612164 tgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 10233333 - 10233373
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||| ||||||| ||||||||||||||||||||    
T  10233333 acaccaggacacacctaatcagaggagtgtccgtgcttcat 10233373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 12919002 - 12919062
Alignment:
Q  38 tcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||  ||||  ||||||| || ||||||| ||||| ||||||||||    
T  12919002 tcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcat 12919062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 25452155 - 25452107
Alignment:
Q  51 gtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    |||||| ||||| | ||||||||||| |||| |||||||||||||||||    
T  25452155 gtgtcagacaccggaacacgcctaattcgagcagtgtccgtgcttcatt 25452107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 26830641 - 26830701
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    ||||| ||||| ||||||||   | ||| |||||||||||||| |||||||||||||||||    
T  26830641 gtgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 29144354 - 29144322
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||||||||||||||    
T  29144354 acacgcctaatccgaagagtgtccgtgcttcat 29144322  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 31694673 - 31694641
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||| ||||||||||||||||||||    
T  31694673 acacgcctaatctgaggagtgtccgtgcttcat 31694641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 46940782 - 46940750
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||| ||||||||||    
T  46940782 acacgcctaatccgaggagtgttcgtgcttcat 46940750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 467 - 404
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||| ||||||  ||||| |||||| ||||||||||||||||||||||||||||    
T  467 gtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 16641974 - 16641911
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| ||||| |||||| |||||| |||||||||||||||||| |||||||||    
T  16641974 gtgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcat 16641911  T

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Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 22652041 - 22652104
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||  ||||| ||||||| |||||||||||||||||||||||||||    
T  22652041 gtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcat 22652104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 29447104 - 29447041
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||  ||||| ||||||||||||||| |||||||||||||||||||    
T  29447104 gtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcat 29447041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 29510298 - 29510235
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||| ||||||  ||||| |||||| ||||||||||||||||||||||||||||    
T  29510298 gtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 29510235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 36450759 - 36450696
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||||||||||| |||||||||    
T  36450759 gtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcat 36450696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 126352 - 126295
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtg 92  Q
    ||||||||||||||||||||| || ||| ||||||| |||||||||||||||||||||    
T  126352 gtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 5813646 - 5813707
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttc 96  Q
    |||||||||||||||||||||  ||||| |||||||||||||  ||||||||||||||||||    
T  5813646 gtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 3025605 - 3025668
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||   |||||| |||||||||||||||||||||||||||    
T  3025605 gtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 8343381 - 8343444
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||| ||||||| |||||||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcat 8343444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 15816123 - 15816060
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||  ||  ||||| |||||||||||||||||| ||||||||||||||||    
T  15816123 gtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 15816060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 21465477 - 21465540
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||| |||||  ||| |||||||||  ||||||||||||||||||||    
T  21465477 gtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcat 21465540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 34451026 - 34450963
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  ||||  |||||||||| |||| |||||||||||||||||||    
T  34451026 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 34450963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 40332245 - 40332307
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    |||| ||||||||||||||||  ||||| |||| |||||||||||||||||||||||| ||||    
T  40332245 gtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 926793 - 926729
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    ||||||||| |||||||||||  ||||| ||||| || | |||||||||||||||||||||||||    
T  926793 gtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcatt 926729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 22943349 - 22943301
Alignment:
Q  40 ggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtc 88  Q
    ||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 24413564 - 24413501
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||  |||||| |||| | ||||||| |||||||||| ||||||||||||||||    
T  24413564 gtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcat 24413501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 26902169 - 26902106
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||   |||  |||||||||| ||| ||||||||||||||||||||    
T  26902169 gtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgcttcat 26902106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 27067294 - 27067233
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| ||||| |||||| ||| ||| |||||||||||||||||||||||||||    
T  27067294 gtgtcggacacgacatgtgtcgaacacc-gga-acgtctaatccgaggagtgtccgtgcttcat 27067233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 33405389 - 33405330
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgct 94  Q
    |||||||||||||||| ||||  ||||||||||||| ||||||| | |||||||||||||    
T  33405389 gtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgct 33405330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 44067604 - 44067646
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  44067604 acaccaggacacgcctaattcgaggagtgtccgtgcttcattg 44067646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 16987989 - 16988030
Alignment:
Q  57 aacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||| |||||| ||||||||||||||||||||||||||||    
T  16987989 aacaccgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 31514938 - 31514971
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||||||||||    
T  31514938 gacacgcctaatccgaggagtgtccgtgcttcat 31514971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 14134760 - 14134816
Alignment:
Q  42 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||   |||| ||||||||||||| ||||||||||||||| |||||    
T  14134760 acacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcat 14134816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 17751733 - 17751773
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  17751733 acaccgggacacgcctaatccgaggagtgtccgcgcttcat 17751773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 17760720 - 17760760
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  17760720 acaccgggacacgcctaatccgaggagtgtccgcgcttcat 17760760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 22197736 - 22197676
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    |||||||||| ||||||||||  ||||| |  ||||||||||| |||||||||||||||||    
T  22197736 gtgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctt 22197676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 34127214 - 34127174
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  34127214 acacctggacacacctaatccaaggagtgtccgtgcttcat 34127174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 3951541 - 3951478
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||  ||||  | ||||||||||||| |||||| ||||||||||||    
T  3951541 gtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcat 3951478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 18407777 - 18407836
Alignment:
Q  39 cggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||| ||||  ||||  |||||||||||||  ||||||||||||||||||||    
T  18407777 cggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcat 18407836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 24858070 - 24858133
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||  || || |||||||||||||| |||||||||  |||||||||    
T  24858070 gtgtcggacacgacatgtgtcccacgccgggacacgcctaatcagaggagtgtttgtgcttcat 24858133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 29447509 - 29447572
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||||| |||||  ||||| ||||| | |||||| ||||||||||||||||||||    
T  29447509 gtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcat 29447572  T

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Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 95
Target Start/End: Complemental strand, 31109494 - 31109463
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgctt 95  Q
    ||||||||||||||||||||||||||||||||    
T  31109494 ggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 43737816 - 43737753
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| |||||  ||||  ||| |||||| |||| |||||||||||||||||||    
T  43737816 gtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcat 43737753  T

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Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 6065650 - 6065588
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||| ||||  ||||| | |||||| |||| | |||||||||||||||||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcat 6065588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 25566913 - 25566947
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||| |||||||||    
T  25566913 ggacacgcctaatccgaggagtgtctgtgcttcat 25566947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 39820511 - 39820545
Alignment:
Q  64 ggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||| ||||||||||||||||    
T  39820511 ggacacgcctaatccgagaagtgtccgtgcttcat 39820545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 1676765 - 1676830
Alignment:
Q  35 gtgtcggacac-gacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    ||||||||||| ||||| ||||  ||||||| |||| |||||||||| | ||||||||||||||||    
T  1676765 gtgtcggacaccgacacatgtctgacacctgcacacacctaatccgaagggtgtccgtgcttcatt 1676830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 3658237 - 3658270
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||| |||||||||||||||||||||    
T  3658237 gacacgcctaattcgaggagtgtccgtgcttcat 3658270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 11927050 - 11927017
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| |||||||||||||||||    
T  11927050 gacacgcctaatccgatgagtgtccgtgcttcat 11927017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 37283817 - 37283757
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||| |||||||||||||||| |   || ||||||| ||||||||||||||| |||||||||||    
T  37283817 gtgtgggacacgacacgtgtcta---ccgggacacgtctaatccgaggagtgcccgtgcttcat 37283757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 8343044 - 8343084
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||||||||||||| ||||||| |||||||||    
T  8343044 acaccgggacacgcctaatccgaagagtgtctgtgcttcat 8343084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 9383035 - 9383083
Alignment:
Q  51 gtgtcaaacac-ctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| | ||||||||||||||| || ||||||||||||||||    
T  9383035 gtgtcaaacacacaggacacgcctaatccaagcagtgtccgtgcttcat 9383083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 11803355 - 11803387
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||||||||||||||||||||    
T  11803355 acacgtctaatccgaggagtgtccgtgcttcat 11803387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 11833935 - 11833967
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||| |||||||||    
T  11833935 acacgcctaatccgaggagtgtctgtgcttcat 11833967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 12570503 - 12570443
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    ||||| ||||| |||||||||  ||||| |||||||||||||| || || |||||||||||    
T  12570503 gtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctt 12570443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 12570729 - 12570669
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgctt 95  Q
    ||||| ||||| |||||||||  ||||| |||||||||||||| || || |||||||||||    
T  12570729 gtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctt 12570669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 13436952 - 13436912
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||||||||||| ||||||||| |||||||||    
T  13436952 acaccgggacacgcctaatccaaggagtgtctgtgcttcat 13436912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 18964251 - 18964307
Alignment:
Q  42 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||| |||| |||||   ||||||||| |||||||||||||| |||||||||    
T  18964251 acacgacacctgtctaacacggagacacgccttatccgaggagtgtctgtgcttcat 18964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 20679388 - 20679336
Alignment:
Q  47 acacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    |||||||||  ||||| |||||||||| | ||||||||||||| |||||||||    
T  20679388 acacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcatt 20679336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 24205782 - 24205750
Alignment:
Q  66 acacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||| |||||    
T  24205782 acacgcctaatccgaggagtgtccgtgtttcat 24205750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 25172691 - 25172631
Alignment:
Q  36 tgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttc 96  Q
    |||||||||||| |||| ||||||||  | ||||| ||||||||| ||||||| |||||||    
T  25172691 tgtcggacacgatacgtatcaaacactagaacacgtctaatccgaagagtgtcagtgcttc 25172631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 27213602 - 27213642
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||| |||||||||| ||||||||||||||||    
T  27213602 acaccgggacacggctaatccgagaagtgtccgtgcttcat 27213642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 8852 - 8915
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  |||||  ||||||||||||| ||||||| ||||||||||||    
T  8852 gtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcat 8915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 71790 - 71853
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||| |||||||||  ||||| ||||||| ||||||||||||||||| |||||||||    
T  71790 gtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcat 71853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 70332 - 70394
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttca 97  Q
    |||||||||||||||||||||  ||||| ||||| ||||||||||| |||||| |||||||||    
T  70332 gtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 13460 - 13525
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    ||||||||||||||||| |||  ||||  |||||| |||||||| |||||||||||||||||||||    
T  13460 gtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcattg 13525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 21867 - 21802
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    ||||||||||||||||| |||  ||||  |||||| |||||||| |||||||||||||||||||||    
T  21867 gtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcattg 21802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 225274 - 225197
Alignment:
Q  24 gtgttggtgatgtgtcggacac-gacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 100  Q
    |||||||||  ||||||||||| ||| |||||   ||||| ||||||||||||| |||||||||||||||||||||||    
T  225274 gtgttggtgtcgtgtcggacactgacgcgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttcattg 225197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 4879 - 4823
Alignment:
Q  42 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||| ||||  ||||  |||||||||||||||||||||||||||||||||||    
T  4879 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 4823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 3362 - 3425
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||| ||||||||    ||||  |||||||||||||||||||||||||||||||||||    
T  3362 gtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcat 3425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 14581 - 14644
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  |||||  |||||||||||||  |||||||| ||||||||||    
T  14581 gtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcat 14644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 3843 - 3780
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||| ||||  ||| |  ||||||||||||||||||||||||| ||||||||    
T  3843 gtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcat 3780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 2999 - 3052
Alignment:
Q  41 gacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgct 94  Q
    ||||||||||||||   ||||| | |||||||||||||||||||||||||||||    
T  2999 gacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgct 3052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 46741 - 46774
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||||||||||||||||    
T  46741 gacacgcctaatccgaggagtgtccgtgcttcat 46774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 8626 - 8566
Alignment:
Q  38 tcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||| |||||||  ||||  | ||||||||||| |||||||||||||||||||||    
T  8626 tcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcat 8566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 8662 - 8718
Alignment:
Q  42 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||  ||||  ||| ||||||||||| |||||||||||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcat 8718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 51892 - 51940
Alignment:
Q  50 cgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||| |||||| |||||||||||||||||||| ||||| ||||||||    
T  51892 cgtgtccaacaccgggacacgcctaatccgaggaatgtccatgcttcat 51940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 24117 - 24153
Alignment:
Q  62 ctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||| |||||||||||||||||    
T  24117 ctggacacgcctaatccgatgagtgtccgtgcttcat 24153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 5041 - 4978
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    |||||||||||||||||||||  |||    |||| ||||||||||||||||||| |||||||||    
T  5041 gtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcat 4978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 9741 - 9678
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| |||||||||| ||||  ||| | |||||||  ||||||||||||||||||||||||||    
T  9741 gtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 93
Target Start/End: Original strand, 188477 - 188512
Alignment:
Q  58 acacctggacacgcctaatccgaggagtgtccgtgc 93  Q
    ||||| ||||||||||||||||||||||||||||||    
T  188477 acaccaggacacgcctaatccgaggagtgtccgtgc 188512  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 263366 - 263303
Alignment:
Q  35 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||| ||||||||||||||   | |||  |||||||||||||||||||||||||||| |||||    
T  263366 gtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 2002 - 2067
Alignment:
Q  35 gtgtcggacac-gacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcatt 99  Q
    ||||||||||| ||||| ||||  ||||||| |||| |||||||||| | ||||||||||||||||    
T  2002 gtgtcggacaccgacacatgtctgacacctgcacacacctaatccgaagggtgtccgtgcttcatt 2067  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 98
Target Start/End: Original strand, 21243 - 21276
Alignment:
Q  65 gacacgcctaatccgaggagtgtccgtgcttcat 98  Q
    ||||||||||||||||||||| ||||||||||||    
T  21243 gacacgcctaatccgaggagtatccgtgcttcat 21276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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