View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3918_low_211 (Length: 235)
Name: NF3918_low_211
Description: NF3918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3918_low_211 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 37941107 - 37941322
Alignment:
| Q |
1 |
tatatacgtacacataatttgagggacccaagaccaaaagtacaaggcaaagaagaaatgtttaattgatttgatggtcatatagttaagttgaggaaat |
100 |
Q |
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| T |
37941107 |
tatatacgtacacataatttgagggacccaagaccaaaagtacaaggcaaagaagaaatgtttaattgatttgatggtcatatagttaagttgaggaaat |
37941206 |
T |
|
| Q |
101 |
accaaaattcactctttcatacattagaattatactaccaataccatttttcatgaacaaaaacataatgagtgaacttaattatactagcatcagttgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37941207 |
accaaaattcactctttcatacattagaattatactaccagtaccatttttcatgaacaaaaacataatgagtgaacttaattatactagcatcagttgc |
37941306 |
T |
|
| Q |
201 |
tttacaaaatacactt |
216 |
Q |
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|||||||| ||||||| |
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| T |
37941307 |
tttacaaattacactt |
37941322 |
T |
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