View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3918_low_231 (Length: 211)
Name: NF3918_low_231
Description: NF3918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3918_low_231 |
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Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 38063611 - 38063439
Alignment:
| Q |
25 |
cacaaatgggaccctaaaaaacagaaaaagtgcgcgtgctataagaagctaagatgctggagtgaatgatagtaaggaacaaacaaaaggaacctaaaag |
124 |
Q |
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| T |
38063611 |
cacaaatgggaccctaaaaaacagaaaaagtgcgcgtgctataagaagctaagatgctggagtgaatgatagtaaggaacaaacaaaaggaacctaaaag |
38063512 |
T |
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| Q |
125 |
gtggtgactactttggcatctttcactgtcatactgacaaatgagaagaaatgtattgtacaccgttgtttgt |
197 |
Q |
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| T |
38063511 |
atggtgactactttcgcatctttcactgtcatactgacaaatgagaagaaatgtattgtacaccgttgtttgt |
38063439 |
T |
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