View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3918_low_95 (Length: 344)
Name: NF3918_low_95
Description: NF3918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3918_low_95 |
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Alignment Details
Target: chr8 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 43861566 - 43861891
Alignment:
| Q |
1 |
tgatgaacaagttcaaaaacctaatccctcaaagccattaccacctaagagaattttgtgtgagtttgtgcaaccaaatccggaaatagttaaaaagctt |
100 |
Q |
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| T |
43861566 |
tgatgaacaagttcaaaaacctaatccctcaaaaccattactacctaagagaattttgtgtgagtttgtgcaaccaaatccagaaatagttaaaaagctt |
43861665 |
T |
|
| Q |
101 |
cctcaaaaacaaggattgtggagaaggttttccacaagcatttacaaaggtgttcggcgcctccgtgggaaaaaggaaagatatgcagctcagattagaa |
200 |
Q |
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| T |
43861666 |
cctcaaaaacaaggattgtggagaaggttttccacaagcatttacaaaggttttcggcgcctccgtgggaacaaggaaagatatgcagctcagattagaa |
43861765 |
T |
|
| Q |
201 |
atccatttgaaaagacaactgagtaccttggtactcatgataccgagtatgaagctgctttggcttatcgcagaaagactaaggagttccataaaagaaa |
300 |
Q |
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| T |
43861766 |
atccatttgaaaagacaactgagtaccttggtactcatgataccgagtatgaagctgctttggcttatcgcagaaagactaaggagttccataaaagaaa |
43861865 |
T |
|
| Q |
301 |
gttggctgattcgaacaaggacaaac |
326 |
Q |
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| T |
43861866 |
gttagctgattcgaacaaggacaaac |
43861891 |
T |
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