View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3918_low_96 (Length: 340)

Name: NF3918_low_96
Description: NF3918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3918_low_96
NF3918_low_96
[»] chr1 (34 HSPs)
chr1 (18-325)||(38878888-38879201)
chr1 (241-329)||(40439823-40439911)
chr1 (238-329)||(17082726-17082817)
chr1 (240-327)||(27742616-27742703)
chr1 (240-329)||(4213071-4213160)
chr1 (268-329)||(23332296-23332357)
chr1 (240-308)||(48858822-48858890)
chr1 (239-329)||(47214206-47214295)
chr1 (239-308)||(9566965-9567034)
chr1 (239-300)||(49647162-49647223)
chr1 (241-329)||(5771731-5771819)
chr1 (240-308)||(32915076-32915144)
chr1 (265-308)||(3558870-3558913)
chr1 (241-308)||(44294015-44294082)
chr1 (240-307)||(48983673-48983740)
chr1 (238-308)||(1689388-1689458)
chr1 (240-310)||(37139925-37139995)
chr1 (238-300)||(43893254-43893316)
chr1 (288-329)||(4857957-4857998)
chr1 (240-329)||(9987950-9988039)
chr1 (240-301)||(15083062-15083122)
chr1 (240-301)||(24806233-24806294)
chr1 (239-308)||(34008178-34008247)
chr1 (239-300)||(40861273-40861333)
chr1 (241-306)||(46543448-46543513)
chr1 (240-329)||(52362481-52362569)
chr1 (241-329)||(649768-649856)
chr1 (240-308)||(902637-902705)
chr1 (240-308)||(10890050-10890118)
chr1 (240-308)||(15705066-15705134)
chr1 (240-308)||(37843437-37843504)
chr1 (273-329)||(40328724-40328780)
chr1 (265-329)||(50775140-50775204)
chr1 (240-308)||(51286371-51286439)
[»] chr3 (29 HSPs)
chr3 (18-196)||(11662649-11662823)
chr3 (240-329)||(41443174-41443263)
chr3 (240-327)||(32362932-32363019)
chr3 (240-321)||(34307532-34307613)
chr3 (239-308)||(53681109-53681178)
chr3 (241-329)||(25188448-25188536)
chr3 (240-308)||(33374491-33374559)
chr3 (241-321)||(38671618-38671697)
chr3 (239-308)||(19961930-19961999)
chr3 (240-301)||(34456789-34456850)
chr3 (240-301)||(50559223-50559284)
chr3 (241-294)||(51873393-51873446)
chr3 (241-329)||(6178409-6178496)
chr3 (240-308)||(49417574-49417642)
chr3 (239-310)||(10811133-10811204)
chr3 (242-301)||(55151728-55151786)
chr3 (239-301)||(34607932-34607993)
chr3 (239-329)||(36670998-36671087)
chr3 (241-299)||(37057071-37057129)
chr3 (240-329)||(288724-288813)
chr3 (239-308)||(24095410-24095479)
chr3 (240-329)||(27168665-27168754)
chr3 (240-301)||(40367607-40367668)
chr3 (240-308)||(108430-108497)
chr3 (240-328)||(9862532-9862620)
chr3 (265-301)||(25847113-25847149)
chr3 (241-301)||(33389008-33389068)
chr3 (265-329)||(42358622-42358686)
chr3 (240-308)||(46019461-46019529)
[»] chr8 (26 HSPs)
chr8 (153-240)||(27411859-27411944)
chr8 (240-335)||(33107844-33107939)
chr8 (240-329)||(1068605-1068694)
chr8 (240-321)||(34435728-34435809)
chr8 (240-329)||(44090886-44090974)
chr8 (21-67)||(27412278-27412324)
chr8 (240-329)||(6991792-6991880)
chr8 (241-329)||(45405967-45406055)
chr8 (240-301)||(28772135-28772196)
chr8 (238-329)||(15716959-15717050)
chr8 (265-327)||(42652619-42652681)
chr8 (240-308)||(6004943-6005010)
chr8 (241-308)||(295545-295612)
chr8 (241-307)||(5600992-5601058)
chr8 (241-307)||(5639562-5639628)
chr8 (239-329)||(9549183-9549272)
chr8 (240-329)||(4994380-4994468)
chr8 (244-301)||(31266245-31266302)
chr8 (239-308)||(31596946-31597015)
chr8 (240-300)||(2730973-2731033)
chr8 (239-307)||(3946238-3946306)
chr8 (240-308)||(7678731-7678798)
chr8 (240-308)||(9738698-9738765)
chr8 (265-329)||(33451547-33451610)
chr8 (242-306)||(40528749-40528813)
chr8 (240-308)||(42047334-42047401)
[»] chr4 (44 HSPs)
chr4 (238-329)||(29227226-29227317)
chr4 (263-329)||(36130336-36130402)
chr4 (240-329)||(52204849-52204938)
chr4 (240-329)||(54000697-54000786)
chr4 (241-311)||(32012896-32012966)
chr4 (238-335)||(50721722-50721819)
chr4 (241-308)||(5932768-5932835)
chr4 (238-301)||(45082978-45083040)
chr4 (240-314)||(50050637-50050710)
chr4 (240-310)||(56557732-56557802)
chr4 (240-301)||(4915684-4915745)
chr4 (240-329)||(7632445-7632534)
chr4 (237-306)||(24209794-24209862)
chr4 (244-329)||(38519796-38519881)
chr4 (240-321)||(39158104-39158185)
chr4 (240-329)||(43174983-43175071)
chr4 (239-300)||(50506391-50506452)
chr4 (240-329)||(51255745-51255834)
chr4 (241-329)||(2738251-2738339)
chr4 (285-321)||(26600190-26600226)
chr4 (232-308)||(56474768-56474844)
chr4 (241-308)||(149489-149556)
chr4 (241-308)||(13139148-13139215)
chr4 (240-311)||(32696180-32696251)
chr4 (242-321)||(41262336-41262415)
chr4 (240-307)||(51225530-51225597)
chr4 (243-329)||(24575835-24575920)
chr4 (238-308)||(40755918-40755987)
chr4 (265-327)||(55266049-55266111)
chr4 (239-308)||(12638823-12638891)
chr4 (239-308)||(22257201-22257269)
chr4 (239-308)||(34116545-34116613)
chr4 (240-329)||(37297048-37297136)
chr4 (239-308)||(40409171-40409239)
chr4 (239-283)||(4914904-4914948)
chr4 (241-329)||(10250499-10250586)
chr4 (240-296)||(12595647-12595703)
chr4 (241-301)||(14443198-14443258)
chr4 (241-329)||(21617183-21617270)
chr4 (241-329)||(30170004-30170091)
chr4 (239-307)||(32696794-32696862)
chr4 (241-329)||(39440484-39440571)
chr4 (241-329)||(49896650-49896737)
chr4 (240-308)||(50890078-50890145)
[»] chr7 (32 HSPs)
chr7 (239-329)||(2008841-2008931)
chr7 (240-335)||(33845041-33845136)
chr7 (239-329)||(43081873-43081962)
chr7 (240-321)||(43807804-43807884)
chr7 (238-329)||(46880899-46880990)
chr7 (240-329)||(37352109-37352198)
chr7 (241-329)||(34978296-34978384)
chr7 (241-328)||(32777691-32777778)
chr7 (240-300)||(30061280-30061340)
chr7 (241-329)||(42598191-42598279)
chr7 (241-300)||(49069249-49069308)
chr7 (239-329)||(13152591-13152680)
chr7 (239-329)||(33180694-33180783)
chr7 (240-310)||(47448825-47448895)
chr7 (239-308)||(34304683-34304751)
chr7 (240-300)||(40112967-40113026)
chr7 (240-307)||(12007191-12007258)
chr7 (269-300)||(20337338-20337369)
chr7 (239-298)||(22195144-22195203)
chr7 (240-307)||(35192279-35192346)
chr7 (240-310)||(9792765-9792835)
chr7 (239-301)||(37899224-37899286)
chr7 (239-329)||(41018661-41018751)
chr7 (239-304)||(8904415-8904480)
chr7 (244-329)||(24532926-24533011)
chr7 (265-329)||(3148750-3148814)
chr7 (240-308)||(7990078-7990145)
chr7 (241-329)||(10055616-10055703)
chr7 (244-308)||(24614321-24614384)
chr7 (241-329)||(31844589-31844675)
chr7 (240-308)||(44184563-44184631)
chr7 (239-283)||(44649355-44649399)
[»] chr6 (17 HSPs)
chr6 (241-335)||(33712320-33712414)
chr6 (241-329)||(18065073-18065161)
chr6 (240-329)||(8645308-8645396)
chr6 (240-310)||(34442065-34442135)
chr6 (240-329)||(8505757-8505846)
chr6 (240-308)||(2242026-2242094)
chr6 (241-329)||(17182099-17182186)
chr6 (240-308)||(32253779-32253846)
chr6 (242-329)||(5570317-5570403)
chr6 (240-307)||(26832645-26832712)
chr6 (240-329)||(17551362-17551451)
chr6 (239-308)||(20822872-20822941)
chr6 (240-308)||(9083066-9083133)
chr6 (238-290)||(9699352-9699403)
chr6 (241-329)||(11635518-11635606)
chr6 (265-301)||(13690006-13690042)
chr6 (241-301)||(14817932-14817991)
[»] chr2 (34 HSPs)
chr2 (240-321)||(37731191-37731272)
chr2 (241-329)||(19916655-19916743)
chr2 (241-329)||(11965793-11965881)
chr2 (250-329)||(37316798-37316877)
chr2 (241-329)||(8427552-8427640)
chr2 (265-329)||(8847511-8847575)
chr2 (240-308)||(2220992-2221060)
chr2 (242-329)||(26206848-26206934)
chr2 (241-335)||(25881544-25881637)
chr2 (243-308)||(35705496-35705561)
chr2 (237-301)||(19109105-19109168)
chr2 (241-308)||(17917389-17917455)
chr2 (241-308)||(22888826-22888892)
chr2 (241-308)||(23690514-23690581)
chr2 (238-329)||(31578431-31578522)
chr2 (241-308)||(36587473-36587539)
chr2 (241-308)||(44287445-44287511)
chr2 (269-307)||(11385019-11385057)
chr2 (240-306)||(14876956-14877022)
chr2 (239-329)||(18510673-18510763)
chr2 (240-306)||(30977888-30977954)
chr2 (240-310)||(38821365-38821435)
chr2 (240-308)||(5167745-5167814)
chr2 (240-301)||(38257676-38257737)
chr2 (239-308)||(43057062-43057131)
chr2 (240-308)||(1352387-1352455)
chr2 (240-308)||(1889146-1889213)
chr2 (241-301)||(7664080-7664140)
chr2 (244-308)||(9194432-9194496)
chr2 (240-308)||(15283255-15283322)
chr2 (241-329)||(28245728-28245815)
chr2 (244-295)||(30783951-30784003)
chr2 (289-329)||(30831802-30831842)
chr2 (240-308)||(34139043-34139110)
[»] scaffold0110 (1 HSPs)
scaffold0110 (240-329)||(28310-28399)
[»] scaffold0618 (1 HSPs)
scaffold0618 (240-329)||(8936-9024)
[»] chr5 (24 HSPs)
chr5 (243-329)||(39195719-39195805)
chr5 (240-321)||(32872889-32872970)
chr5 (238-329)||(13309879-13309970)
chr5 (239-329)||(42446274-42446364)
chr5 (240-308)||(611863-611931)
chr5 (241-308)||(34124621-34124688)
chr5 (239-329)||(33037518-33037607)
chr5 (240-311)||(11954430-11954501)
chr5 (239-310)||(17097804-17097875)
chr5 (241-308)||(22649666-22649732)
chr5 (238-307)||(8920075-8920144)
chr5 (240-329)||(13089765-13089854)
chr5 (240-301)||(18660758-18660818)
chr5 (288-329)||(21210865-21210906)
chr5 (240-329)||(33598962-33599050)
chr5 (240-329)||(40364567-40364656)
chr5 (240-300)||(5996666-5996725)
chr5 (240-308)||(19376137-19376204)
chr5 (240-308)||(19839990-19840058)
chr5 (240-300)||(19844321-19844381)
chr5 (241-329)||(25871430-25871517)
chr5 (240-300)||(32284837-32284897)
chr5 (240-308)||(32912037-32912105)
chr5 (240-308)||(37700459-37700527)
[»] scaffold0201 (1 HSPs)
scaffold0201 (241-321)||(8472-8552)
[»] scaffold0432 (1 HSPs)
scaffold0432 (239-329)||(6503-6593)
[»] scaffold0034 (1 HSPs)
scaffold0034 (240-329)||(101889-101978)
[»] scaffold0128 (1 HSPs)
scaffold0128 (240-308)||(10935-11003)
[»] scaffold0174 (1 HSPs)
scaffold0174 (244-308)||(34798-34862)
[»] scaffold0056 (1 HSPs)
scaffold0056 (240-308)||(76624-76691)
[»] scaffold0041 (1 HSPs)
scaffold0041 (241-329)||(10947-11034)


Alignment Details
Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 325
Target Start/End: Complemental strand, 38879201 - 38878888
Alignment:
Q  18 actttctcccaccgaacataaaagttaatcagtgtgtgttttgtatatacaagatatgaacaacgtatcttaatttgagtggctaacaaacattattatn 117  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38879201 actttctcccaccaaacataaaagttaatcagtgtacgttttgtatatacaagatatgaacaacgtatcttaatttgagtggctaacaaacattattata 38879102  T
Q  118 nnnnnnng--gaacttaaaacaatttagattcattgtttgttagttcactttctaagaaattggttatgaaagcaccaagctaacacgttgtggaaaaat 215  Q
              ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  38879101 aaaagaaaatgaacttaaa-caatttagattcattgtttgttagtttactttctaagaaattggttatgaaagcaccaagc-aacacgttgcggaaaaat 38879004  T
Q  216 ggttttgtacttttgtatttacatagagaaatgatatttgaacggctactttttgacaattt--------ttatgataattttctctctcatacacacat 307  Q
    ||  |||||||||||||||||||||||||||| |||||||||   | |||||||||||| ||        || ||| || ||||||||||||| ||||||    
T  38879003 gg--ttgtacttttgtatttacatagagaaataatatttgaataaccactttttgacaacttatgataacttgtgacaactttctctctcatatacacat 38878906  T
Q  308 tgttcttatactttttct 325  Q
    ||||||| ||||||||||    
T  38878905 tgttcttctactttttct 38878888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 40439911 - 40439823
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||| ||||||  | | |||||||||| |||||||| || ||||||||||||||||||||||||||| |||||| |||||||    
T  40439911 gagaaatgatacttgaacaaccattttttgacaacttttatgacaactttctctctcatacacacattgttcttctactttctctctct 40439823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 17082817 - 17082726
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||| ||||||||||  |||||||||||||| |||| ||| || ||||||||||||||||||||| ||||| || ||| |||||||    
T  17082817 atagagaaataatatttgaacaactactttttgacaacttttgtgacaactttctctctcatacacacattattcttctattttctctctct 17082726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 27742616 - 27742703
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctct 327  Q
    |||||||||||||||||||  | |||||||||||| |||| ||| || ||||||||||||||||||||||||||| ||| || |||||    
T  27742616 agagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatacacacattgttcttctacattctctct 27742703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 4213071 - 4213160
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | ||||||| || |||| ||| || |||||||||||||| |||||||||||| ||| || |||||||    
T  4213071 agagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactcacattgttcttctaccttctctctct 4213160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 23332296 - 23332357
Alignment:
Q  268 ttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||| |||| |||||||||||| |||||||||||||||||| || ||||||| ||||||    
T  23332296 ttgacaacttttttgataattttctttctcatacacacattgtttttttacttttactctct 23332357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 48858822 - 48858890
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||  | |||||||||||| |||| ||| || |||||||||||||| ||||||    
T  48858822 agagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatactcacatt 48858890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 47214206 - 47214295
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||  ||| ||| |||||| |||| ||| || |||||||||||||| |||||| || || |||||| |||||||    
T  47214206 tagagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacattatt-ttttactttatctctct 47214295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 9567034 - 9566965
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||||  | | |||||||||| |||| ||| || |||||||||||||| ||||||    
T  9567034 tagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacatt 9566965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 49647223 - 49647162
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||  || ||| |||||||||    
T  49647223 tagagaaatgatatttgaacaactattttttgacaatttttatgtgaactttatctctcata 49647162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 5771819 - 5771731
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||    ||||||||| ||||||| ||| || |||||||||||||| |||||| |  || |||||| |||||||    
T  5771819 gagaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacattatcattttactttctctctct 5771731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 32915144 - 32915076
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||  ||| ||| |||||| |||| ||| || |||||||||||||| ||||||    
T  32915144 agagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacatt 32915076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 3558870 - 3558913
Alignment:
Q  265 tttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||    
T  3558870 tttttgacaacttttatgataactttctctctcatactcacatt 3558913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 44294015 - 44294082
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||   ||| ||| |||||||||||   ||||||||||||||||||| ||||||    
T  44294015 gagaaatgatatttgaatatctattttgtgacaatttttgcaataattttctctctcatactcacatt 44294082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 48983740 - 48983673
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacat 307  Q
    |||||||||||||||||||  | | |||||||||| |||| ||| || |||||||||||||| |||||    
T  48983740 agagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacat 48983673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 1689388 - 1689458
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||| ||  ||| ||| | ||||||||| ||| || |||||||||||||| ||||||    
T  1689388 atagagaaatgatatttgtacaactattttataacaatttttgtgacaactttctctctcatactcacatt 1689458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 37139995 - 37139925
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgt 310  Q
    ||||||||| |||||||||  ||| ||| ||| |||| |||||| ||||||||||||||||  ||||||||    
T  37139995 agagaaatgttatttgaacaactattttatgataattcttatgacaattttctctctcatattcacattgt 37139925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 43893254 - 43893316
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    |||||||||||||||||||||  | | ||| | |||| |||||||| ||||||||||||||||    
T  43893254 atagagaaatgatatttgaacatccattttgtcacaacttttatgacaattttctctctcata 43893316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 4857957 - 4857998
Alignment:
Q  288 tttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||| |||||||||||||| |||||| |||||||    
T  4857957 tttctctctcatgcacacattgttcttctactttctctctct 4857998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 9987950 - 9988039
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | |||||||||| |||| ||| || ||||||| |||||| |||||| |  || |||||| |||||||    
T  9987950 agagaaatgatatttgaacaaccaatttttgacaacttttgtgacaactttctctttcatactcacattatatttttactttctctctct 9988039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 15083122 - 15083062
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    |||||||||||||||||||  | | |||||||||| |||| ||| |||||||||||||||||    
T  15083122 agagaaatgatatttgaacaacca-tttttgacaacttttgtgacaattttctctctcatac 15083062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 24806294 - 24806233
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    ||||||||||||||||||   | |||||||||||| |||| ||| || ||||||||||||||    
T  24806294 agagaaatgatatttgaataaccactttttgacaacttttgtgacaactttctctctcatac 24806233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 34008178 - 34008247
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||||  ||| ||| |||||| |||| ||| || ||||| |||||||| ||||||    
T  34008178 tagagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctatctcatactcacatt 34008247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 40861333 - 40861273
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    |||| |||||||||||||||  ||||||||| | ||||||| |||||||||| |||||||||    
T  40861333 tagaaaaatgatatttgaacaactacttttt-ataatttttgtgataattttatctctcata 40861273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 46543513 - 46543448
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacaca 306  Q
    ||||||||||||||||||  | | ||| ||| ||| ||| ||||||||||||||||||||| ||||    
T  46543513 gagaaatgatatttgaacatccattttatgataatctttgtgataattttctctctcatactcaca 46543448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 52362481 - 52362569
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | ||| |||||| |||| ||| || |||||||||||||| |||||| || || |||||| |||||||    
T  52362481 agagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattatt-ttttactttatctctct 52362569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 649768 - 649856
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  | | ||||| |||| |||| ||| || |||||||||||||| |||||| |  || |||||| |||||||    
T  649768 gagaaatgatatttgaacaaccatttttttacaacttttgtgacaactttctctctcatactcacattatctttttactttctctctct 649856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 902637 - 902705
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||  ||| ||  |||||| |||||| | || |||||||||||||| ||||||    
T  902637 agagaaatgatatttgaacatctatttagtgacaacttttataacaactttctctctcatactcacatt 902705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 10890118 - 10890050
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||  | | ||| |||||| |||| ||| || |||||||||||||| ||||||    
T  10890118 agagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatt 10890050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 15705134 - 15705066
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||  | | ||| |||||| |||| ||| || |||||||||||||| ||||||    
T  15705134 agagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatt 15705066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 37843504 - 37843437
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  ||||||||||||||  ||| ||| || |||||||||||||| ||||||    
T  37843504 agagaaatgatatttgtacaactactttttgacaa-ctttgtgacaactttctctctcatactcacatt 37843437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 40328780 - 40328724
Alignment:
Q  273 aatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||| ||||||||||||||||||||| |||||| |  || ||||| ||||||||    
T  40328780 aatttttgtgataattttctctctcatactcacattatgattttacttattctctct 40328724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 50775204 - 50775140
Alignment:
Q  265 tttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||| ||| || |||||||||||||| |||||| |  || |||||| |||||||    
T  50775204 tttttgacaatttttgtgacaactttctctctcatactcacattatgtttttactttatctctct 50775140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 51286439 - 51286371
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||   || ||| |||||| |||| ||| || |||||||||||||| ||||||    
T  51286439 agagaaatgatatttgaacatttattttatgacaacttttgtgacaactttctctctcatactcacatt 51286371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 3e-33; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 11662823 - 11662649
Alignment:
Q  18 actttctcccaccgaacataaaagttaatcagtgtgtgttttgtatatacaagatatgaacaacgtatcttaatttgagtggctaacaaacattattatn 117  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||      
T  11662823 actttctcccaccgaacacaaaagctaattagtgtgtgttttgtatatacaagatatgaacaatgtatcttaatttcagtggctaatgaacattatta-c 11662725  T
Q  118 nnnnnnnggaacttaaaacaatttagattcattgtttgttagttcactttctaagaaa--ttggttatgaaagcaccaagc 196  Q
            |||||| |||||||||||||| |    ||| |||||||||||||||||||  |||||||||||||||||||||    
T  11662724 agaaaaatgaactt-aaacaatttagattta----ttgctagttcactttctaagaaattttggttatgaaagcaccaagc 11662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 41443263 - 41443174
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||   |||||||||||| |||| ||||||||||||||||||||| |||||| ||||| |||||| |||||||    
T  41443263 agagaaatgatatttgaacgatcactttttgacaacttttgtgataattttctctctcatactcacattattcttttactttctctctct 41443174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 32362932 - 32363019
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctct 327  Q
    |||||||||||||||||||  | | |||||||||| |||||||| || ||| ||||||||||||||||||||||| |||||| |||||    
T  32362932 agagaaatgatatttgaacaaccattttttgacaacttttatgacaactttatctctcatacacacattgttcttttactttctctct 32363019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 34307613 - 34307532
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatacttt 321  Q
    ||||||||||||||| |||  | | ||||||||||||||||||| || ||||||| |||||| |||||||||||| ||||||    
T  34307613 agagaaatgatatttaaacaacaattttttgacaatttttatgacaactttctctttcatactcacattgttcttctacttt 34307532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 53681109 - 53681178
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||||  | ||||||| | ||||||| |||||||||||||| |||||| ||||||    
T  53681109 tagagaaatgatatttgaacaaccactttttaataatttttgtgataattttctctttcatactcacatt 53681178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 25188536 - 25188448
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  ||| |||||||||| ||||   | || |||||||||| ||| |||||||| |||||||||| |||||||    
T  25188536 gagaaatgatatttgaacaactattttttgacaacttttgcaacaactttctctctcttactcacattgtccttatactttctctctct 25188448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 33374491 - 33374559
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||   | | ||| |||||||||||||||||| |||||||||||||| ||||||    
T  33374491 agagaaatgatatttgaataaccattttatgacaatttttatgataactttctctctcatactcacatt 33374559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 38671618 - 38671697
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatacttt 321  Q
    ||||||||||||||||||  | | ||||| | ||||||| ||| ||||||||||||| ||| |||||||||||||||||||    
T  38671618 gagaaatgatatttgaacaaccatttttt-ataatttttgtgacaattttctctctcgtactcacattgttcttatacttt 38671697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 19961930 - 19961999
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||||  | |||||| |||||||||| ||| || |||||| ||||||||| ||||    
T  19961930 tagagaaatgatatttgaacaaccacttttagacaatttttgtgacaactttctcactcatacactcatt 19961999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 34456789 - 34456850
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    ||||||||||||||||||   | |||||||||||| |||| |||||| ||||||||||||||    
T  34456789 agagaaatgatatttgaataaccactttttgacaacttttgtgataactttctctctcatac 34456850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 50559284 - 50559223
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    |||||||||||||||| ||  ||| |||||||||| |||| ||| |||||||||||||||||    
T  50559284 agagaaatgatatttgtacaactattttttgacaacttttgtgacaattttctctctcatac 50559223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 51873393 - 51873446
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctct 294  Q
    ||||||||||||||||||  ||| ||| ||||||||||||||| ||||||||||    
T  51873393 gagaaatgatatttgaacaactattttgtgacaatttttatgacaattttctct 51873446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 6178496 - 6178409
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||| ||  ||| |||||||||| |||| ||| ||||||||||||||||| |||||| |  || |||||| |||||||    
T  6178496 gagaaatgatatttgtacaacta-tttttgacaacttttgtgacaattttctctctcatactcacattatgtttttactttctctctct 6178409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 49417574 - 49417642
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||  ||| ||| |||||| |||| ||| || |||||||||||||| ||||||    
T  49417574 agagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacatt 49417642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 10811133 - 10811204
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgt 310  Q
    ||||||||||||||||||||  | | ||| |||||| |||| ||| || |||||||||||||| ||||||||    
T  10811133 tagagaaatgatatttgaacaaccattttatgacaacttttgtgacaactttctctctcatactcacattgt 10811204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 55151786 - 55151728
Alignment:
Q  242 agaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    |||||||||||||||||  | | |||||||||| ||||||||||||||| ||||||||||    
T  55151786 agaaatgatatttgaacaacca-tttttgacaacttttatgataattttatctctcatac 55151728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 34607993 - 34607932
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    ||||||||||||||||| ||  | ||||| |||||||||||| ||||||||||||| ||||||    
T  34607993 tagagaaatgatatttgtacaaccactttgtgacaattttta-gataattttctctttcatac 34607932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 36671087 - 36670998
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||  | | ||||| ||||||||| ||| || ||| |||||||||| |||||| |  || ||||||||||||||    
T  36671087 tagagaaatgatatttgaacaaccatttttt-acaatttttgtgacaactttttctctcatactcacattatctttttactttttctctct 36670998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 37057129 - 37057071
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcat 299  Q
    ||||||| ||||||||||  | | ||||||| ||||||||||| |||||||||||||||    
T  37057129 gagaaataatatttgaacaaccattttttgataatttttatgacaattttctctctcat 37057071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 288724 - 288813
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | ||||| | || |||| ||| || |||||||||||||| |||||| || || |||||| |||||||    
T  288724 agagaaatgatatttgaacaacaatttttttataacttttgtgacaactttctctctcatactcacattatttttttactttctctctct 288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 24095479 - 24095410
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||||  | | ||| ||| ||||||| ||| || |||||||||||||| ||||||    
T  24095479 tagagaaatgatatttgaacatccattttatgataatttttgtgacaactttctctctcatactcacatt 24095410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 27168754 - 27168665
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | ||||| | ||||||| ||| || |||||||||||||| || ||| ||||| |||||  |||||||    
T  27168754 agagaaatgatatttgaacaaccattttttaataatttttgtgacaactttctctctcatactcatattattcttctacttcctctctct 27168665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 40367607 - 40367668
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    ||||||||||||||||||   ||| ||||  ||||||||| ||| |||||||||||||||||    
T  40367607 agagaaatgatatttgaataactatttttaaacaatttttgtgacaattttctctctcatac 40367668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 108430 - 108497
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  | ||||| ||||||||||| ||| || |||||||||||||| ||||||    
T  108430 agagaaatgatatttgtacaaccactttgtgacaattttt-tgacaactttctctctcatactcacatt 108497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 9862532 - 9862620
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctc 328  Q
    |||||||||||||||||||  | | |||||| ||| |||| ||| || |||||||||||||   ||||||| ||| || ||||||||||    
T  9862532 agagaaatgatatttgaacaaccattttttgtcaacttttgtgacaactttctctctcatattaacattgtccttttattttttctctc 9862620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 25847149 - 25847113
Alignment:
Q  265 tttttgacaatttttatgataattttctctctcatac 301  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  25847149 tttttgacaatttttatgataactttctctcttatac 25847113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 33389008 - 33389068
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    ||||||||||||||||||  | ||||||  ||||||||| ||| || ||||||||||||||    
T  33389008 gagaaatgatatttgaacaaccacttttaaacaatttttgtgacaactttctctctcatac 33389068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 42358686 - 42358622
Alignment:
Q  265 tttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||| ||| || |||||||||||||| |||||| |  || |||||| |||||||    
T  42358686 tttttgacaatttttgtgacaactttctctctcatactcacattatctttttactttatctctct 42358622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 46019461 - 46019529
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||  ||| |||  ||||| |||| ||| || |||||||||||||| ||||||    
T  46019461 agagaaatgatatttgaacatctattttgcgacaacttttgtgacaactttctctctcatactcacatt 46019529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 27411944 - 27411859
Alignment:
Q  153 ttgttagttcactttctaagaaattggttatgaaagcaccaagctaacacgttgtggaaaaatggttttgtacttttgtatttacata 240  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  27411944 ttgttagttcacttt-taagaaattggttatgaaagcaccaagc-aacacgttgtggaaaaattgttttgtacttttgtatttacata 27411859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 240 - 335
Target Start/End: Complemental strand, 33107939 - 33107844
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctctgctgct 335  Q
    |||||||||||||||||||  | |||||||||||| |||||||| || |||||| |||||||||||||||||||| |||||| |||||||| ||||    
T  33107939 agagaaatgatatttgaacaaccactttttgacaacttttatgacaactttctccctcatacacacattgttcttctactttctctctctgttgct 33107844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 1068605 - 1068694
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | |||||||||||| |||| ||| || ||||||||||||||||||||||||||| |||||| |||||||    
T  1068605 agagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatacacacattgttcttctactttctctctct 1068694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 34435809 - 34435728
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatacttt 321  Q
    |||||||||||||||||||  | |||||||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||    
T  34435809 agagaaatgatatttgaacaaccactttttgacaacttttgtgacaattttctctctcatacacacattgttcttctacttt 34435728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 44090886 - 44090974
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  |||||||| || || |||  ||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  44090886 agagaaatgatatttgaacaactacttttcgataactttg-tgacaattttctctctcatacacacattgttcttctactttctctctct 44090974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 27412324 - 27412278
Alignment:
Q  21 ttctcccaccgaacataaaagttaatcagtgtgtgttttgtatatac 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  27412324 ttctcccaccgaacataaaagttaatcggtgtgtgttttgtatatac 27412278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 6991880 - 6991792
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  ||| ||  ||||||||||| ||||||||||||||||||||| |||||| || || |||||| |||||||    
T  6991880 agagaaatgatatttgaacatctatttggtgacaatttttgtgataattttctctctcatactcacattatt-ttttactttatctctct 6991792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 45406055 - 45405967
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  ||| ||||| | ||||||| |||||||||| |||||||||| |||||||  ||| |||||| |||||||    
T  45406055 gagaaatgatatttgaacaactattttttaataatttttgtgataattttttctctcatactcacattgcccttctactttctctctct 45405967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 28772196 - 28772135
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    |||||||||||||||||||  | | ||||||||||||||| |||||| ||||||||||||||    
T  28772196 agagaaatgatatttgaacaaccattttttgacaatttttgtgataactttctctctcatac 28772135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 15717050 - 15716959
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||     ||||||||| || |||| ||| || ||| ||||||||||| ||||||||||| |||||| |||||||    
T  15717050 atagagaaatgatatttgaataatcactttttgataacttttgtgacaactttttctctcatacatacattgttcttctactttctctctct 15716959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 42652619 - 42652681
Alignment:
Q  265 tttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctct 327  Q
    ||||| |||||||||||||||| ||||||||| |||| |||||||||||| ||| || |||||    
T  42652619 tttttaacaatttttatgataactttctctctgatactcacattgttcttctacattctctct 42652681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 6004943 - 6005010
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  ||||||| |||||||||||| || || |||||||||||||| ||||||    
T  6004943 agagaaatgatatttgtacaactactttgtgacaattttta-gacaactttctctctcatactcacatt 6005010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 295545 - 295612
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||| ||  | ||||| | ||||||||| |||||| |||||||||||||| ||||||    
T  295545 gagaaatgatatttgtacaaccactttatcacaatttttttgataactttctctctcatactcacatt 295612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 5601058 - 5600992
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacat 307  Q
    ||||||||||||||||||  | | |||||||||| |||| ||| |||||| |||||||||| |||||    
T  5601058 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaattttttctctcatactcacat 5600992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 5639562 - 5639628
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacat 307  Q
    ||||||||||||||||||  | | |||||||||| |||| ||| |||||| |||||||||| |||||    
T  5639562 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaattttttctctcatactcacat 5639628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 9549272 - 9549183
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||| |||||||||||||||  | | ||| |||||| |||| ||| ||||||||||||||||| |||||| || || |||||| |||||||    
T  9549272 tagaaaaatgatatttgaacatccattttgtgacaacttttgtgacaattttctctctcatactcacattatt-ttttactttatctctct 9549183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 4994380 - 4994468
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||| |||  | | || |||||||||||| |||||| ||| |||||||||| |||||| || || |||||| |||||||    
T  4994380 agagaaatgatatttaaacatccatttgttgacaatttttgtgataactttatctctcatactcacattatt-ttttactttatctctct 4994468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 31266302 - 31266245
Alignment:
Q  244 aaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    |||||||||||||||  | | ||||| ||||||||| |||||||| ||||||||||||    
T  31266302 aaatgatatttgaacatccattttttaacaatttttgtgataattctctctctcatac 31266245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 31596946 - 31597015
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||||  | | ||| ||||||||||| ||| || | |||||||||||| ||||||    
T  31596946 tagagaaatgatatttgaacatccattttatgacaatttttgtgacaactctctctctcatactcacatt 31597015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 2731033 - 2730973
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    |||||||||||||||||||  | |||||||||||| |||| | | || |||||||||||||    
T  2731033 agagaaatgatatttgaacaaccactttttgacaacttttgtaacaactttctctctcata 2730973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 3946238 - 3946306
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacat 307  Q
    ||||||||||||||||||||  | | ||| |||||| |||| ||| || |||||||||||||| |||||    
T  3946238 tagagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactcacat 3946306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 7678731 - 7678798
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  | |||||||||||| |||  ||| ||||||||||||||||| ||||||    
T  7678731 agagaaatgatatttgtacaaccactttttgacaactttg-tgacaattttctctctcatactcacatt 7678798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 9738765 - 9738698
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  | ||||| | ||||||||| ||| ||||||||||||||||| ||||||    
T  9738765 agagaaatgatatttgtacaaccactttctcacaattttt-tgacaattttctctctcatactcacatt 9738698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 33451610 - 33451547
Alignment:
Q  265 tttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||| |||| ||| || |||||||||||||| ||||||| |||| |||||| |||||||    
T  33451610 tttttgacaacttttgtgacaactttctctctcatactcacattg-tcttctactttctctctct 33451547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 40528749 - 40528813
Alignment:
Q  242 agaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacaca 306  Q
    |||||||||||||||||  ||| ||| |||||| |||||||| || ||||||| |||||| ||||    
T  40528749 agaaatgatatttgaacaactattttgtgacaacttttatgacaactttctctttcatactcaca 40528813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 42047334 - 42047401
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  |||||||  |||||| ||| ||| ||||||||||||||||| ||||||    
T  42047334 agagaaatgatatttgtacaactactttgggacaatcttt-tgacaattttctctctcatactcacatt 42047401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 238 - 329
Target Start/End: Complemental strand, 29227317 - 29227226
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||||  | ||||||||| ||||||| |||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  29227317 atagagaaatgatatttgaacaaccactttttgataatttttgtgataactttctctctcatacacacattgttcttctactttctctctct 29227226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 36130402 - 36130336
Alignment:
Q  263 actttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||| |||| ||| || ||| ||||||||||||||||||||||| ||||||||||||||    
T  36130402 actttttgacaacttttgtgacaactttatctctcatacacacattgttcttctactttttctctct 36130336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 52204849 - 52204938
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||   || ||||| ||||||||| | |||||||||||| |||||| ||||||||| || |||||| |||||||    
T  52204849 agagaaatgatatttgaacaattattttttaacaatttttgttataattttctctttcatactcacattgtttttctactttctctctct 52204938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 54000697 - 54000786
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | ||||||||||||||||||| | || |||||||||||||| |||||| |  || |||||| |||||||    
T  54000697 agagaaatgatatttgaacaaccactttttgacaatttttataacaactttctctctcatactcacattatcattttactttctctctct 54000786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 311
Target Start/End: Original strand, 32012896 - 32012966
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgtt 311  Q
    ||||||||||||||||||  | | |||||||||| |||| ||| || ||||||||||||||||||||||||    
T  32012896 gagaaatgatatttgaacaaccaatttttgacaacttttgtgacaactttctctctcatacacacattgtt 32012966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 335
Target Start/End: Complemental strand, 50721819 - 50721722
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctctgctgct 335  Q
    |||||||||||||||||||||  | | |||||||||| |||| |||||| ||||||| |||||| |||||| |  || |||||| ||||||| |||||    
T  50721819 atagagaaatgatatttgaacaaccaatttttgacaacttttgtgataactttctctttcatactcacattatatttttactttctctctctactgct 50721722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 5932835 - 5932768
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||  | |||||||||||| |||| ||| || |||||||||||||| ||||||    
T  5932835 gagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatactcacatt 5932768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 45082978 - 45083040
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    |||||||||||||||||||||  | | |||||||||| |||| |||||||||||||||||||||    
T  45082978 atagagaaatgatatttgaacaacca-tttttgacaacttttgtgataattttctctctcatac 45083040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 314
Target Start/End: Original strand, 50050637 - 50050710
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttctt 314  Q
    |||||||||||||||||||   || ||||||||||||||| ||| ||||||||||||||||   |||||||||||    
T  50050637 agagaaatgatatttgaacaatta-tttttgacaatttttgtgacaattttctctctcatatttacattgttctt 50050710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 56557732 - 56557802
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgt 310  Q
    |||||||||||||||||||  | | ||| |||||| |||| ||| ||||||||||||||||| ||||||||    
T  56557732 agagaaatgatatttgaacaacaattttatgacaacttttgtgacaattttctctctcatactcacattgt 56557802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 4915745 - 4915684
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    |||||||||||||||||||  | | ||| ||||||||||||||| || ||||||||||||||    
T  4915745 agagaaatgatatttgaacatccattttgtgacaatttttatgacaactttctctctcatac 4915684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 7632534 - 7632445
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||    | |||||||||| |||| |||||||||||||| |||||| |||||| |  || |||||| |||||||    
T  7632534 agagaaatgatatttgaacaatcaatttttgacaacttttgtgataattttctctttcatactcacattatatttttactttctctctct 7632445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 306
Target Start/End: Complemental strand, 24209862 - 24209794
Alignment:
Q  237 catagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacaca 306  Q
    ||||||||||||||||||  ||| | ||||| |||||||||||| || ||||||||||||||||| ||||    
T  24209862 catagagaaatgatatttatacgaccactttgtgacaattttta-gacaattttctctctcatactcaca 24209794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 38519796 - 38519881
Alignment:
Q  244 aaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||  | | ||||||||||||||| ||| || |||||||||||||| |||||  || || |||||| |||||||    
T  38519796 aaatgatatttgaacaaccattttttgacaatttttgtgacaactttctctctcatactcacatgattattctactttctctctct 38519881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 39158104 - 39158185
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatacttt 321  Q
    |||||||||||||||||||    | ||||||| ||||||| ||| || |||||||||||||| |||||| ||||| ||||||    
T  39158104 agagaaatgatatttgaacaatcattttttgataatttttgtgacaactttctctctcatactcacattattcttctacttt 39158185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 43174983 - 43175071
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | ||||| |||| |||| |||||| |||||||||||||| |||||| || || |||||| |||||||    
T  43174983 agagaaatgatatttgaacaaccatttttt-acaacttttgtgataactttctctctcatactcacattatttttttactttctctctct 43175071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 50506391 - 50506452
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    ||||||||||||||||||||  | | ||||||| |||||||  |||||||||||||||||||    
T  50506391 tagagaaatgatatttgaacaaccattttttgataatttttgagataattttctctctcata 50506452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 51255745 - 51255834
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | |||||||||| |||| ||| || |||||||||||||| |||||  || || |||||| |||||||    
T  51255745 agagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacatgattattctactttctctctct 51255834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 2738339 - 2738251
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||    | ||||||||||||||| |||||| |||||||||||||  |||||| |  || |||||| |||||||    
T  2738339 gagaaatgatatttgaacaatcattttttgacaatttttgtgataactttctctctcatattcacattatctttctactttctctctct 2738251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 26600226 - 26600190
Alignment:
Q  285 aattttctctctcatacacacattgttcttatacttt 321  Q
    |||||||||||||||||||||||||||||| ||||||    
T  26600226 aattttctctctcatacacacattgttcttctacttt 26600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 308
Target Start/End: Complemental strand, 56474844 - 56474768
Alignment:
Q  232 atttacatagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||| |||||||||||||||||||||    | ||||| ||||||||| ||| |||||||||||| |||| ||||||    
T  56474844 atttaaatagagaaatgatatttgaacaatcatttttttacaatttttgtgacaattttctctcttatactcacatt 56474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 149556 - 149489
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||    ||||||||| ||||||| ||| || |||||||||||||| ||||||    
T  149556 gagaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacatt 149489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 13139148 - 13139215
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||  | | ||| ||| ||||||||||| || |||||||||||||| ||||||    
T  13139148 gagaaatgatatttgaacatccattttatgataatttttatgacaactttctctctcatactcacatt 13139215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 32696180 - 32696251
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgtt 311  Q
    |||||||||||||||||||  | | |||||||||| | || |||||| |||||||||||||  |||||||||    
T  32696180 agagaaatgatatttgaacatcaattttttgacaactattgtgataactttctctctcatattcacattgtt 32696251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 41262415 - 41262336
Alignment:
Q  242 agaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatacttt 321  Q
    ||||||||||||| |||  ||| |||||||||||||||   | ||||||||||||| ||| |||||||| ||| ||||||    
T  41262415 agaaatgatatttaaacaactattttttgacaatttttgcaacaattttctctctcttactcacattgtccttctacttt 41262336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 51225597 - 51225530
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacat 307  Q
    |||||||||||||||||||  ||| ||| ||| ||||||||||| || ||||||||| |||| |||||    
T  51225597 agagaaatgatatttgaacatctattttgtgataatttttatgacaactttctctctaatactcacat 51225530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 329
Target Start/End: Complemental strand, 24575920 - 24575835
Alignment:
Q  243 gaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||  | | || ||||||| ||||||||||| ||||||||||||||  |||||||  || |||||| |||||||    
T  24575920 gaaatgatatttgaacaacca-ttattgacaacttttatgataaatttctctctcatacttacattgtctttttactttctctctct 24575835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 40755918 - 40755987
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||| ||  | | ||| | ||||||||| ||||||||||||||||||||| ||||||    
T  40755918 atagagaaatgatatttgtacaaccattttctaacaattttt-tgataattttctctctcatactcacatt 40755987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 55266049 - 55266111
Alignment:
Q  265 tttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctct 327  Q
    |||||| ||| |||||| ||||||||||||||||||  |||||||| ||| |||||| |||||    
T  55266049 tttttgtcaacttttattataattttctctctcatattcacattgtccttttactttctctct 55266111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 12638823 - 12638891
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||| ||  ||||||| | |||||||||| || || |||||||||||||| ||||||    
T  12638823 tagagaaatgatatttgtacaactactttgtaacaattttta-gacaactttctctctcatactcacatt 12638891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 22257269 - 22257201
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||||  ||||||| |||||| |||| ||| ||||| |||| |||||| ||||||    
T  22257269 tagagaaatgatatttgaacaactactttgtgacaactttt-tgacaatttcctctatcatactcacatt 22257201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 34116613 - 34116545
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||| ||  | ||||| |||||| |||| ||| ||||||||||||||||| ||||||    
T  34116613 tagagaaatgatatttgtacaaccactttgtgacaactttt-tgacaattttctctctcatactcacatt 34116545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 37297048 - 37297136
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | ||||| |||| |||| ||| ||||||||||||||||| |||||| |  || |||||| |||||||    
T  37297048 agagaaatgatatttgaacaaccatttttt-acaacttttgtgacaattttctctctcatactcacattatctttttactttctctctct 37297136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 40409239 - 40409171
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||| ||  ||||||| ||||| ||||| ||| || |||||||||||||| ||||||    
T  40409239 tagagaaatgatatttgtacatctactttgtgacagttttt-tgacaactttctctctcatactcacatt 40409171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 4914904 - 4914948
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatga 283  Q
    ||||||||||||||||||||  ||| ||| |||||||||||||||    
T  4914904 tagagaaatgatatttgaacaactattttgtgacaatttttatga 4914948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 10250586 - 10250499
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  ||| ||||| |||| |||| ||| || |||||||||||||| |||||| |  || |||||| |||||||    
T  10250586 gagaaatgatatttgaacaactatttttt-acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctct 10250499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 12595703 - 12595647
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctct 296  Q
    |||||||||||||||||||  | | ||||||| ||||||| | ||||||||||||||    
T  12595703 agagaaatgatatttgaacatccattttttgataatttttgtcataattttctctct 12595647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 14443198 - 14443258
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    ||||||||||||||||||    | |||||||||| |||| ||| |||||||||||||||||    
T  14443198 gagaaatgatatttgaacaatcattttttgacaacttttgtgacaattttctctctcatac 14443258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 21617183 - 21617270
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  | | ||| ||||||||||| | | || |||||||||||||| |||||| || || |||||| |||||||    
T  21617183 gagaaatgatatttgaacatccattttgtgacaatttttgttacaactttctctctcatactcacattatt-ttttactttatctctct 21617270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 30170091 - 30170004
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||| ||||||||||  ||| ||| |||||| |||| ||| || |||||||||||||| |||||| || || |||||| |||||||    
T  30170091 gagaaattatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacattatt-ttttactttatctctct 30170004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 32696862 - 32696794
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacat 307  Q
    ||||||||||||||||| ||  | | ||| | |||| |||| ||||||||||||||||||||| |||||    
T  32696862 tagagaaatgatatttgtacaaccattttctaacaacttttgtgataattttctctctcatactcacat 32696794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 39440484 - 39440571
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  | | ||||| |||| |||| |||||||||||||| |||||| |||||| |  || |||||| |||||||    
T  39440484 gagaaatgatatttgaacaaccatttttt-acaacttttgtgataattttctctttcatactcacattttcattttactttctctctct 39440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 49896737 - 49896650
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||| || |||   || |||||||||| ||||||||||||||| |||||||||  |||||| || || |||||| |||||||    
T  49896737 gagaaatgatagttaaacatatattttttgacaacttttatgataattttttctctcatagtcacattatt-ttttactttatctctct 49896650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 50890145 - 50890078
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  ||| |||||||||| |||| ||| || |||||||||||||| ||||||    
T  50890145 agagaaatgatatttgtacaacta-tttttgacaacttttgtgacaactttctctctcatactcacatt 50890078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 2008931 - 2008841
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||  | |||||||||||| |||| ||| || ||||||||||||||||||||||||||| |||||| |||||||    
T  2008931 tagagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatacacacattgttcttctactttctctctct 2008841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 335
Target Start/End: Original strand, 33845041 - 33845136
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctctgctgct 335  Q
    ||||||||||||||||||   | |||||||||||| |||| ||| || ||||||| ||||||||||||||||||| |||||||| |||||| ||||    
T  33845041 agagaaatgatatttgaataaccactttttgacaacttttgtgacaactttctctttcatacacacattgttcttctactttttttctctgttgct 33845136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 43081962 - 43081873
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||| ||||||||||  | |||||||||||| |||||||| || ||||||||| ||||||||||||||||| |||||| |||||||    
T  43081962 tagagaaat-atatttgaacaaccactttttgacaacttttatgacaactttctctcttatacacacattgttcttctactttctctctct 43081873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 43807884 - 43807804
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatacttt 321  Q
    |||||||||||||||||||  ||| | ||||||||||||||||| |||||| |||||||||| |||||||||||| ||||||    
T  43807884 agagaaatgatatttgaacaacta-tatttgacaatttttatgacaattttttctctcatactcacattgttcttttacttt 43807804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 46880899 - 46880990
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||||  | | ||||||| |||||||  |||||||||||||||||||| || ||||||||| |||| | |||||||    
T  46880899 atagagaaatgatatttgaacaaccattttttgataatttttgcgataattttctctctcatactcatattgttcttctactatctctctct 46880990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 37352109 - 37352198
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | ||||||||||||||| |||||||||| |||||||||  |||||||  ||| |||||| |||||||    
T  37352109 agagaaatgatatttgaacaaccattttttgacaatttttgtgataattttttctctcatattcacattgcccttctactttctctctct 37352198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 34978296 - 34978384
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||    ||||||||||||||||| ||| || |||||||||||||| |||||| | ||| |||||| |||||||    
T  34978296 gagaaatgatatttgaacaatcactttttgacaatttttgtgacaactttctctctcatactcacattatccttttactttctctctct 34978384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 32777778 - 32777691
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctc 328  Q
    ||||||||||||||||||  | | |||||||||| |||||||| || |||||||||||||| |||| ||| ||| |||||| ||||||    
T  32777778 gagaaatgatatttgaacaaccattttttgacaacttttatgacaactttctctctcatactcacactgtccttctactttctctctc 32777691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 30061280 - 30061340
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    ||||||||||||||| |||  ||| ||||||||||||||| ||| ||||||||||||||||    
T  30061280 agagaaatgatattttaacaactattttttgacaatttttgtgacaattttctctctcata 30061340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 42598279 - 42598191
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||| ||  ||| ||||| ||||||||| |||||| ||| |||||||||| || ||| |  |||||||||||||||||    
T  42598279 gagaaatgatatttgtacaactattttttaacaatttttgtgataactttatctctcatactcatattatatttatactttttctctct 42598191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 49069249 - 49069308
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    ||||||||||||||| ||  | |||||||||||| |||| ||||||||||||||||||||    
T  49069249 gagaaatgatatttgtacaaccactttttgacaacttttgtgataattttctctctcata 49069308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 13152591 - 13152680
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||  | | |||||||||| |||| ||| || |||||||||||||| |||||| | ||| |||||| |||||||    
T  13152591 tagagaaatgatatttgaacaacca-tttttgacaacttttgtgacaactttctctctcatactcacattatccttttactttctctctct 13152680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 33180783 - 33180694
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||    | ||| |||||| |||||||| ||||||||||||||||| |||||| || || |||||| |||||||    
T  33180783 tagagaaatgatatttgaacattcattttgtgacaacttttatgacaattttctctctcatactcacattatt-ttttactttatctctct 33180694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 47448825 - 47448895
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgt 310  Q
    |||||||||||||||||||  | | |||||||||| |||| ||| || |||||||||||||| ||||||||    
T  47448825 agagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacattgt 47448895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 34304751 - 34304683
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||| |||||||||||| ||  ||| |||||||||||||||| || ||||||||||||||||| ||||||    
T  34304751 tagaaaaatgatatttgtacaactattttttgacaattttta-gacaattttctctctcatactcacatt 34304683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 40113026 - 40112967
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    |||||||||||||||||||  ||| ||||| ||||||||| ||| ||||||||||||||||    
T  40113026 agagaaatgatatttgaacaactatttttt-acaatttttgtgagaattttctctctcata 40112967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 12007258 - 12007191
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacat 307  Q
    |||||||||||||||||||  | | |||||||||| |||| ||| || |||||||||||||| |||||    
T  12007258 agagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacat 12007191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 300
Target Start/End: Original strand, 20337338 - 20337369
Alignment:
Q  269 tgacaatttttatgataattttctctctcata 300  Q
    ||||||||||||||||||||||||||||||||    
T  20337338 tgacaatttttatgataattttctctctcata 20337369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 22195203 - 22195144
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctca 298  Q
    ||||||||||||||||||||  ||  |||||||||| |||| |||||| |||||||||||    
T  22195203 tagagaaatgatatttgaacaactgatttttgacaacttttgtgataactttctctctca 22195144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 35192346 - 35192279
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacat 307  Q
    |||||||| ||||||||||  | | ||| |||||| ||||||||||||||| |||||||||| |||||    
T  35192346 agagaaataatatttgaacatccattttgtgacaacttttatgataattttttctctcatactcacat 35192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 9792765 - 9792835
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgt 310  Q
    |||||||||||||||||||  | ||||||  |||| |||| |||||| |||||||||||||| | ||||||    
T  9792765 agagaaatgatatttgaacaaccacttttaaacaacttttgtgataactttctctctcatactctcattgt 9792835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 37899286 - 37899224
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    ||||||||||||||||||||  | | ||| ||||||||||| ||| || ||||||||||||||    
T  37899286 tagagaaatgatatttgaacatccattttgtgacaatttttgtgacaactttctctctcatac 37899224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 41018661 - 41018751
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||  ||| |||| ||||| |||| ||| || ||||| |||||||| |||||| |  || |||||| |||||||    
T  41018661 tagagaaatgatatttgaacaactatttttggacaacttttgtgacaactttctatctcatactcacattatatttttactttctctctct 41018751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 8904480 - 8904415
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacaca 304  Q
    ||||||||||||||||||||  |   ||| ||| ||||||| ||| ||||||||||||||||||||    
T  8904480 tagagaaatgatatttgaacaaccgttttgtgataatttttgtgacaattttctctctcatacaca 8904415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 329
Target Start/End: Complemental strand, 24533011 - 24532926
Alignment:
Q  244 aaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||  ||| ||| ||| ||||||| ||| |||||| |||||||||| |||||| |  || |||||| |||||||    
T  24533011 aaatgatatttgaacaactattttctgataatttttgtgacaattttttctctcatactcacattatgtttttactttctctctct 24532926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 3148750 - 3148814
Alignment:
Q  265 tttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||| |||||||| |||||||||||| ||||| |||||  | || |||||| |||||||    
T  3148750 tttttgacaacttttatgacaattttctctcttatacatacatttctgttctactttctctctct 3148814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 7990078 - 7990145
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  ||| ||| ||| ||||||| |||||||||||||||| |||| ||||||    
T  7990078 agagaaatgatatttgtacatctattttatgataattttt-tgataattttctctcttatactcacatt 7990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 10055703 - 10055616
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||| ||||  ||| ||| ||||||||||| ||  |||||||| |||||||| |||||| || || |||||| |||||||    
T  10055703 gagaaatgatattcgaacatctattttgtgacaatttttgtggcaattttctttctcatactcacattatt-ttttactttatctctct 10055616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 24614384 - 24614321
Alignment:
Q  244 aaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||  ||| ||||| | ||||||| |||||||||||| |||||||| ||||||    
T  24614384 aaatgatatttgaacaactatttttt-ataatttttgtgataattttctttctcatactcacatt 24614321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 31844675 - 31844589
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  | | ||| ||||||||||||||| |||||||||| | |||| |||||| || || |||||| |||||||    
T  31844675 gagaaatgatatttgaacatcca-tttgtgacaatttttatgacaattttctcttttatactcacattatt-ttttactttatctctct 31844589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 44184631 - 44184563
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||  ||| |||  ||||| |||| ||| || |||||||||||||| ||||||    
T  44184631 agagaaatgatatttgaacatctattttgcgacaacttttgtgacaactttctctctcatactcacatt 44184563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 44649399 - 44649355
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatga 283  Q
    ||||||||||||||||||||  | | |||||||||||||||||||    
T  44649399 tagagaaatgatatttgaacaaccaatttttgacaatttttatga 44649355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 33712320 - 33712414
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctctgctgct 335  Q
    ||||||||||||||||||  | |||||||||||| |||| ||| || ||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  33712320 gagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatacacacattgttcttctactttctctctctgttgct 33712414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 18065161 - 18065073
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||    |||||||||||| |||| ||| || ||| ||||||||||||||||||||||| |||||| |||||||    
T  18065161 gagaaatgatatttgaacaatcactttttgacaacttttgtgacaactttttctctcatacacacattgttcttctactttctctctct 18065073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 8645308 - 8645396
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | |||||||||||| |||| ||| || |||||||||||||| |||||| | ||| |||||| |||||||    
T  8645308 agagaaatgatatttgaacaac-actttttgacaacttttgtgacaactttctctctcatactcacattatccttttactttctctctct 8645396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 310
Target Start/End: Complemental strand, 34442135 - 34442065
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgt 310  Q
    ||||||||||||||||| |  ||| ||| |||||| |||| ||| ||||||||||||||||| ||||||||    
T  34442135 agagaaatgatatttgagcaactattttatgacaacttttgtgacaattttctctctcatactcacattgt 34442065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 8505846 - 8505757
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||    | |||||||||| |||| ||| || |||||||||||||  |||||| | ||| ||||||||||||||    
T  8505846 agagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcatattcacattatccttttactttttctctct 8505757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 2242094 - 2242026
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||    | ||||||||||||||| ||| || |||||||||||||| ||||||    
T  2242094 agagaaatgatatttgaacaatcattttttgacaatttttgtgacaactttctctctcatactcacatt 2242026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 17182099 - 17182186
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||| |||  ||| ||||||| ||||||| ||| ||||||||||||||||  ||| ||||| |  ||||||||||||||    
T  17182099 gagaaatgatattttaacaactattttttgataatttttgtgacaattttctctctcatattcacgttgtt-tactactttttctctct 17182186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 32253779 - 32253846
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  | ||||||||| ||||||  ||||||||||||||||||||| ||||||    
T  32253779 agagaaatgatatttgtacaaccactttttgataattttg-tgataattttctctctcatactcacatt 32253846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 5570403 - 5570317
Alignment:
Q  242 agaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||  | | ||||| ||||||||| ||| ||||||||||||||||| |||||| |  || || |||||||||||    
T  5570403 agaaatgatatttgaacaaccatttttt-acaatttttgtgacaattttctctctcatactcacattatatttttattttttctctct 5570317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 26832645 - 26832712
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacat 307  Q
    ||||||||||||||||||   | | |||||||||||||||   ||||||||||||||||||| |||||    
T  26832645 agagaaatgatatttgaagatccattttttgacaattttttatataattttctctctcatactcacat 26832712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 17551451 - 17551362
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | |||||||||| |||| | | || |||||||||||||| |||||| |  || |||||| |||||||    
T  17551451 agagaaatgatatttgaacaaccattttttgacaacttttgtaacaactttctctctcatactcacattatgtttttactttatctctct 17551362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 20822941 - 20822872
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||||  | | ||| |||||| |||| ||| || |||||||||||||| ||||||    
T  20822941 tagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatt 20822872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 9083133 - 9083066
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| |   ||| ||||| ||||||||| |||||| |||||||||||||| ||||||    
T  9083133 agagaaatgatatttgtataactattttttaacaatttttgtgataa-tttctctctcatactcacatt 9083066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 9699403 - 9699352
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataatttt 290  Q
    |||||||||||||||||||||   || ||||||||||||||| ||||||||||    
T  9699403 atagagaaatgatatttgaacaa-tattttttgacaatttttgtgataatttt 9699352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 11635606 - 11635518
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||    | |||||||||| |||| ||| || |||||||||||||  ||||||| |||| || ||| |||||||    
T  11635606 gagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcatattcacattgctcttctattttctctctct 11635518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 13690042 - 13690006
Alignment:
Q  265 tttttgacaatttttatgataattttctctctcatac 301  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  13690042 tttttgacaatttttatgataactttctttctcatac 13690006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 14817932 - 14817991
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    ||||||||||||||||||  ||| ||||| ||||||||| ||| || ||||||||||||||    
T  14817932 gagaaatgatatttgaacaactatttttt-acaatttttgtgacaactttctctctcatac 14817991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 37731272 - 37731191
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatacttt 321  Q
    |||||||||||||||||||  | |||||||||||| |||| ||| |||||||||||||||||||||||||||||| ||||||    
T  37731272 agagaaatgatatttgaacaaccactttttgacaacttttgtgacaattttctctctcatacacacattgttcttctacttt 37731191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 19916655 - 19916743
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  | ||||||| | ||||||| ||| || ||||||||||||||||||||||||||| |||||| |||||||    
T  19916655 gagaaatgatatttgaacaaccactttttaataatttttgtgacaactttctctctcatacacacattgttcttctactttctctctct 19916743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 11965793 - 11965881
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||    |||||||||||| |||| ||| |  ||||||||||||||||||||||||||| |||||| |||||||    
T  11965793 gagaaatgatatttgaacaatcactttttgacaacttttgtgacagctttctctctcatacacacattgttcttctactttctctctct 11965881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 250 - 329
Target Start/End: Complemental strand, 37316877 - 37316798
Alignment:
Q  250 tatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||  | |||||||||||| |||| ||| || ||||||||||||||||||||||||||| |||||| |||||||    
T  37316877 tatttgaacaaccactttttgacaacttttgtgacaactttctctctcatacacacattgttcttctactttctctctct 37316798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 8427552 - 8427640
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||| || ||||||||||||||  ||||| | ||| |||||| |||||||    
T  8427552 gagaaatgatatttgaacatctattttttgacaatttttgtgacaactttctctctcatacttacattatacttttactttctctctct 8427640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 8847511 - 8847575
Alignment:
Q  265 tttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||| ||||| |||||| |||||||    
T  8847511 tttttaacaatttttatgataactttctttctcatacacacattattcttctactttctctctct 8847575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 2220992 - 2221060
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||| ||||||||||  ||| ||| ||||||||||| |||||| |||||||||||||| ||||||    
T  2220992 agagaaataatatttgaacatctattttgtgacaatttttgtgataactttctctctcatactcacatt 2221060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 329
Target Start/End: Original strand, 26206848 - 26206934
Alignment:
Q  242 agaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||  ||| ||| ||||||||||| | |||| |||||||||||||| |||||| || || |||||| |||||||    
T  26206848 agaaatgatatttgaacatctattttatgacaatttttgttataactttctctctcatactcacattatt-ttttactttatctctct 26206934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 25881544 - 25881637
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctctgctgct 335  Q
    ||||||||||||||||||  ||| |||  |||||||||| ||| || |||||||||||||| |||||| || || |||||| |||||||| ||||    
T  25881544 gagaaatgatatttgaacatctattttgcgacaatttttgtgacaactttctctctcatactcacattatt-ttttactttatctctctgttgct 25881637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 35705496 - 35705561
Alignment:
Q  243 gaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||| ||||||||||  ||| ||  |||||| |||||||||||||||||||||||||| ||||||    
T  35705496 gaaattatatttgaacatctatttggtgacaacttttatgataattttctctctcatactcacatt 35705561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 19109168 - 19109105
Alignment:
Q  237 catagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    |||| |||||||||||||||||  ||| ||||| ||||||||| |||||| ||||||||||||||    
T  19109168 catacagaaatgatatttgaacaactatttttt-acaatttttgtgataaatttctctctcatac 19109105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 17917389 - 17917455
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||| ||   || ||||| ||||||||| ||||||||||||||||||||| ||||||    
T  17917389 gagaaatgatatttgtacaattattttttaacaattttt-tgataattttctctctcatactcacatt 17917455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 22888892 - 22888826
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||  | | ||||||||||||||| ||| || |||||||||||||| ||||||    
T  22888892 gagaaatgatatttgaacaacca-tttttgacaatttttgtgacaactttctctctcatactcacatt 22888826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 23690581 - 23690514
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||| | ||  | |||||||||||| |||||||| || |||||||||||||| ||||||    
T  23690581 gagaaatgatattagtacaaccactttttgacaacttttatgacaactttctctctcatactcacatt 23690514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 31578431 - 31578522
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||| ||||||||||||||   ||| |||| |||| ||||| ||| || ||| |||||||||| |||||| ||||| |||||| |||||||    
T  31578431 atagaaaaatgatatttgaataactatttttagacagtttttgtgacaactttttctctcatactcacattattcttttactttatctctct 31578522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 36587539 - 36587473
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||  | | ||||||||||||||| ||| || |||||||||||||| ||||||    
T  36587539 gagaaatgatatttgaacaaccattttttgacaattttt-tgacaactttctctctcatactcacatt 36587473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 44287511 - 44287445
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||  ||| ||||| |||| |||| |||||||||| |||||||||| ||||||    
T  44287511 gagaaatgatatttgaacaacta-ttttttacaacttttgtgataattttttctctcatactcacatt 44287445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 11385057 - 11385019
Alignment:
Q  269 tgacaatttttatgataattttctctctcatacacacat 307  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  11385057 tgacaatttttgtgataattttctctctcatactcacat 11385019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 14876956 - 14877022
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacaca 306  Q
    ||||||||||||| |||||  ||| |||||||||| |||| ||| || |||||||||||||| ||||    
T  14876956 agagaaatgatatgtgaacaactattttttgacaacttttgtgacaactttctctctcatactcaca 14877022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 18510673 - 18510763
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||  ||| |||||||||| ||||   | || |||| ||||| ||| |||||||| ||| |||||| |||||||    
T  18510673 tagagaaatgatatttgaacaactattttttgacaacttttgcaacaactttccctctcttactcacattgtccttctactttctctctct 18510763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 30977888 - 30977954
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacaca 306  Q
    |||||||||||||||||||  | | ||| |||||| |||||||| || |||||||||||||| ||||    
T  30977888 agagaaatgatatttgaacatccattttgtgacaacttttatgacaactttctctctcatactcaca 30977954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 310
Target Start/End: Original strand, 38821365 - 38821435
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgt 310  Q
    |||||||||||||||||||  | | ||| |||||| |||| ||| |||||||| |||||||| ||||||||    
T  38821365 agagaaatgatatttgaacaaccattttatgacaacttttgtgacaattttctttctcatactcacattgt 38821435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 5167814 - 5167745
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttat-gataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  | ||||| ||||||||||| | || ||||||||||||||||| ||||||    
T  5167814 agagaaatgatatttgtacaaccactttgtgacaatttttttagacaattttctctctcatactcacatt 5167745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 38257737 - 38257676
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    ||||||||||||||| |||   || ||| |||||||||||||||||| ||| ||||||||||    
T  38257737 agagaaatgatatttaaacatttattttgtgacaatttttatgataactttttctctcatac 38257676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Original strand, 43057062 - 43057131
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||||  | ||||||| |||| |||| ||| || ||||||||| |||| ||||||    
T  43057062 tagagaaatgatatttgaacaaccactttttaacaacttttgtgacaactttctctcttatactcacatt 43057131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 1352387 - 1352455
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||    | |||||||||| |||||||| || ||||||| |||||| ||||||    
T  1352387 agagaaatgatatttgaacaatcaatttttgacaacttttatgaaaactttctctttcatactcacatt 1352455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 1889146 - 1889213
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  | ||||| ||||||||||| ||| || |||||||||||||| ||||||    
T  1889146 agagaaatgatatttgtacaaccactttctgacaattttt-tgacaactttctctctcatactcacatt 1889213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 7664140 - 7664080
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    ||||||||||||||||||   || |||| |||||||||| |||||| ||||| ||||||||    
T  7664140 gagaaatgatatttgaacaattatttttggacaatttttgtgataactttctatctcatac 7664080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 9194432 - 9194496
Alignment:
Q  244 aaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||  | | ||| |||||| |||||||| || |||||||||||||| ||||||    
T  9194432 aaatgatatttgaacatccattttgtgacaacttttatgacaactttctctctcatactcacatt 9194496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 15283322 - 15283255
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  | ||||| |||||||||||| || || |||||||||||||| ||||||    
T  15283322 agagaaatgatatttgtacaaccactttgtgacaattttta-gacaactttctctctcatactcacatt 15283255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 28245728 - 28245815
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  ||| |||  ||||| |||| ||| || |||||||||||||| |||||| || || |||||| |||||||    
T  28245728 gagaaatgatatttgaacatctattttgcgacaacttttgtgacaactttctctctcatactcacattatt-ttttactttatctctct 28245815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 30783951 - 30784003
Alignment:
Q  244 aaatgatatttgaacggctactttt-tgacaatttttatgataattttctctc 295  Q
    |||||||||||||||  ||| |||| |||||||||||||||||||||| ||||    
T  30783951 aaatgatatttgaacaactatttttttgacaatttttatgataattttatctc 30784003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 30831802 - 30831842
Alignment:
Q  289 ttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||| |||||||||||| |||||| |||||||    
T  30831802 ttctctctcatactcacattgttcttctactttctctctct 30831842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 34139110 - 34139043
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  ||||||| ||| ||||||| ||| |||||| |||||||||| ||||||    
T  34139110 agagaaatgatatttgtacatctactttgtgataattttt-tgacaattttatctctcatactcacatt 34139043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 28399 - 28310
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | ||||||||| || |||| ||| || ||||||||||||||||||||||||||| |||||| |||||||    
T  28399 agagaaatgatatttgaacaaccactttttgataacttttgtgacaactttctctctcatacacacattgttcttctactttctctctct 28310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 9024 - 8936
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  |||||||| || || |||  ||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  9024 agagaaatgatatttgaacaactacttttcgataactttg-tgacaattttctctctcatacacacattgttcttctactttctctctct 8936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 329
Target Start/End: Original strand, 39195719 - 39195805
Alignment:
Q  243 gaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||    ||||||||| ||||||| ||| || ||||||||||||||| ||||||||||| |||||| |||||||    
T  39195719 gaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatacagacattgttcttctactttctctctct 39195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 32872970 - 32872889
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatacttt 321  Q
    |||||||||||||||||||  ||| |||||||||| |||| ||| |||||||| | |||||| ||||||||||| |||||||    
T  32872970 agagaaatgatatttgaacaactattttttgacaacttttgtgacaattttctttttcatactcacattgttctcatacttt 32872889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 13309879 - 13309970
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||| |||||||||||||||  ||| ||||||||||||||| |||||| |||||||||||||  |||||| |  || |||||| |||||||    
T  13309879 atagaaaaatgatatttgaacaactattttttgacaatttttgtgataactttctctctcatattcacattatgtttttactttctctctct 13309970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 42446364 - 42446274
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||  ||| |||||||||| ||||   | || |||||||||| ||| |||||||| ||| ||||||||||||||    
T  42446364 tagagaaatgatatttgaacaactattttttgacaacttttgcaacaactttctctctcttactcacattgtccttctactttttctctct 42446274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 611863 - 611931
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||   ||||||||||||| |||| ||| || |||||||||||||| ||||||    
T  611863 agagaaatgatatttgaacaattactttttgacaacttttgtgacaactttctctctcatactcacatt 611931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 34124621 - 34124688
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||  | | ||| ||| ||||||| ||||||||||||||||||||| ||||||    
T  34124621 gagaaatgatatttgaacatccattttatgataatttttgtgataattttctctctcatactcacatt 34124688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 33037518 - 33037607
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||  | | ||||| |||| |||||||| || |||||||||||||| |||||| |  || ||||||||||||||    
T  33037518 tagagaaatgatatttgaacaaccatttttt-acaacttttatgacaactttctctctcatactcacattatctttttactttttctctct 33037607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 11954430 - 11954501
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgtt 311  Q
    |||||||||||||||||||  ||| | ||| | ||||||| ||| || |||||||||||||| |||||||||    
T  11954430 agagaaatgatatttgaacaactattgttttataatttttgtgacaactttctctctcatactcacattgtt 11954501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 310
Target Start/End: Complemental strand, 17097875 - 17097804
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgt 310  Q
    ||||||||||||||||||||  | | ||||||| || |||| ||| |||||||| |||||||| ||||||||    
T  17097875 tagagaaatgatatttgaacaaccattttttgataacttttgtgacaattttctatctcatactcacattgt 17097804  T

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Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 22649732 - 22649666
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    ||||||||||||||||||  | | ||||| ||||||||| ||| ||||||||||||||||| ||||||    
T  22649732 gagaaatgatatttgaacaaccatttttt-acaatttttgtgacaattttctctctcatactcacatt 22649666  T

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Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 8920075 - 8920144
Alignment:
Q  238 atagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacat 307  Q
    |||||||||||||||||||||  | | ||| |||||| |||| ||| || |||||||||||||| |||||    
T  8920075 atagagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactcacat 8920144  T

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Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 13089854 - 13089765
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||||  | | |||||||||| |||| ||| || ||||||| |||||| |||||| |  || |||||| |||||||    
T  13089854 agagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctttcatactcacattatcattctactttatctctct 13089765  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 18660758 - 18660818
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatac 301  Q
    |||||||||||||||||||  | | |||||||||| |||| ||| |||||||||||||||||    
T  18660758 agagaaatgatatttgaacaacca-tttttgacaacttttgtgacaattttctctctcatac 18660818  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 21210865 - 21210906
Alignment:
Q  288 tttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||| ||||| |||||| |||||||    
T  21210865 tttctctctcatacacacattattcttctactttctctctct 21210906  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 33598962 - 33599050
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||| ||   || ||||||| ||||||| |||||| ||||| |||||||| |||||| |  || ||||||||||||||    
T  33598962 agagaaatgatatttgtacatgta-tttttgataatttttgtgataactttctttctcatactcacattatgtttttactttttctctct 33599050  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 329
Target Start/End: Original strand, 40364567 - 40364656
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||| || || |||| ||| | |||| |||||||| || |||||||||||||| |||||| |  || |||||| |||||||    
T  40364567 agagaaatgatatctgtacagctattttataacaacttttatgacaactttctctctcatactcacattatatttctactttctctctct 40364656  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 5996666 - 5996725
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    |||||||||||||||| ||  ||| ||||| |||||||||| || ||||||||||||||||    
T  5996666 agagaaatgatatttgtacaactattttttaacaattttta-gacaattttctctctcata 5996725  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 19376204 - 19376137
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||| ||  | ||||| |||||| |||| |||||| |||||||||||||| ||||||    
T  19376204 agagaaatgatatttgtacaaccactttctgacaactttt-tgataactttctctctcatactcacatt 19376137  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 19840058 - 19839990
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||    | ||| ||||||||||| ||| || |||||||||||||| ||||||    
T  19840058 agagaaatgatatttgaacattcattttatgacaatttttgtgacaactttctctctcatactcacatt 19839990  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 19844381 - 19844321
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    |||||||||||||||| ||  ||| ||||||| || |||| |||||| |||||||||||||    
T  19844381 agagaaatgatatttgtacaactattttttgataacttttgtgataactttctctctcata 19844321  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 25871517 - 25871430
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||  | | ||| |||||||||||   ||||||||||||||||| | |||||| || || |||||| |||||||    
T  25871517 gagaaatgatatttgaacatccattttgtgacaatttttgctataattttctctctcatgctcacattatt-ttttactttatctctct 25871430  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 32284897 - 32284837
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcata 300  Q
    ||||||||||| ||||||    || |||| ||||||||||||||||||||| |||||||||    
T  32284897 agagaaatgatgtttgaataattatttttggacaatttttatgataattttatctctcata 32284837  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 32912037 - 32912105
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||    | ||| ||| ||||||| ||| ||||||||||||||||| ||||||    
T  32912037 agagaaatgatatttgaacattcattttatgataatttttgtgacaattttctctctcatactcacatt 32912105  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 37700459 - 37700527
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||  | | ||  |||||||| || |||||| |||||||||||||| ||||||    
T  37700459 agagaaatgatatttgaacatccatttggtgacaattattgtgataactttctctctcatactcacatt 37700527  T

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Target: scaffold0201 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 8472 - 8552
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatacttt 321  Q
    ||||||||||||||||||    | ||||| ||||||||||||| || |||||||||||||| |||||||| ||| ||||||    
T  8472 gagaaatgatatttgaacaatcattttttaacaatttttatgacaactttctctctcatactcacattgtccttctacttt 8552  T

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Target: scaffold0432 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 6593 - 6503
Alignment:
Q  239 tagagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||||||||||    | ||||| |||| |||| ||| || ||| |||||||||| |||||||||||| |||||| |||||||    
T  6593 tagagaaatgatatttgaacaatcattttttaacaacttttgtgacaactttatctctcatactcacattgttcttctactttctctctct 6503  T

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Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 101978 - 101889
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    ||||||||||||| |||||  | | |||||||||| |||| ||| || |||||||||||||| |||||||| ||| || ||| |||||||    
T  101978 agagaaatgatatctgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacattgtccttctattttctctctct 101889  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 10935 - 11003
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||| ||||||  | |||||||||||| |||| ||| || |||||||||||||| ||||||    
T  10935 agagaaatgataattgaacaaccactttttgacaacttttgtgacaactttctctctcatactcacatt 11003  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 34862 - 34798
Alignment:
Q  244 aaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||| ||   || ||| ||||||||||||||| || |||||||||||||| ||||||    
T  34862 aaatgatatttgtacaattaatttgtgacaatttttatgacaactttctctctcatactcacatt 34798  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 76691 - 76624
Alignment:
Q  240 agagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacatt 308  Q
    |||||||||||||||||||  ||| ||||| | ||||||| ||| || |||||||||||||| ||||||    
T  76691 agagaaatgatatttgaacaactatttttt-ataatttttgtgacaactttctctctcatacccacatt 76624  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 11034 - 10947
Alignment:
Q  241 gagaaatgatatttgaacggctactttttgacaatttttatgataattttctctctcatacacacattgttcttatactttttctctct 329  Q
    |||||||||||||||||   ||| ||||| | ||||||| ||||||||||||| ||||||| |||||| |  || |||||| |||||||    
T  11034 gagaaatgatatttgaataactatttttt-ataatttttttgataattttctccctcatactcacattatctttttactttctctctct 10947  T

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