View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3919_low_9 (Length: 394)
Name: NF3919_low_9
Description: NF3919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3919_low_9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 380; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 3 - 394
Target Start/End: Original strand, 36867355 - 36867746
Alignment:
| Q |
3 |
cagaaatgaattggatagacatgaagttatgtgagaggatcaaggattggtgaagaacatttagtccttgagtaaggaaggtatagaatccattgattga |
102 |
Q |
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| T |
36867355 |
cagaaatgaattggatagacatgaagttatgtgagaggatcaaggattggtgaagaacatttagtccttgagtaaggaaggtatagaatccattgattga |
36867454 |
T |
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| Q |
103 |
agaagagtttgtgcatgaattagaagacatgatggaattgaaaggtagggaaaagagagtggagttgaagtaaagttgatggagattgaaagatttatat |
202 |
Q |
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| T |
36867455 |
agaagagtttgtgcatgaattagaagacatgatggaattgaaaggtagggaaaagagagtggagttgaagtaaagttgatggagattgatagatttatat |
36867554 |
T |
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| Q |
203 |
aattggaagattaagggaaaaaagatgcaataattaaacaagtgggtatctaagaggtttctaaccttttatggtgttaagttactatttgttgggtgta |
302 |
Q |
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| T |
36867555 |
aattggaagattacgggaaaaaagatgcaataattaaacaagtgggtatctaagaggtttctaaccttttatggtgttaagttactatttgttgggtgta |
36867654 |
T |
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| Q |
303 |
attatgactgttccttatagagtggagaggatgattaggaatcttatataatttgccttaaaagaaactatataatcttaaaaagagaaata |
394 |
Q |
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| T |
36867655 |
attatgactgttccttatagagtggagaggatgattaggaatcttaaataatttgccttaaaagaaactatataatcttaaaaagagaaata |
36867746 |
T |
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