View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3921_high_2 (Length: 464)
Name: NF3921_high_2
Description: NF3921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3921_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 419; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 1 - 450
Target Start/End: Original strand, 30483003 - 30483446
Alignment:
| Q |
1 |
ttgttagattcttgtggtaaggaatcatgccaccagcatcatgtcgaaaacttatcctatcagtgcataattgccatgcaccacttgcctgtgcgaaatc |
100 |
Q |
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| T |
30483003 |
ttgttagattcttgtggtaaggaatcatgccaccagcatcatgtcgaaaacttatcctatcagtgcataattgccatgcaccacttgcctg------atc |
30483096 |
T |
|
| Q |
101 |
ataaattaattagtcctcaatatattaattttttcccttagtgtaattaaattttttccctgcataccttatcaacatgaatggctttcctgactgcatc |
200 |
Q |
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| T |
30483097 |
ataaattaattagtcctcaatatattaattttttcccttagtgtaattaaattttttccctgcataccttatcaacatgaatggctttcctgactgcatc |
30483196 |
T |
|
| Q |
201 |
gttgtttagccacgtggttgctacttcatcattctgcgttttgcgaaatttgttattggtttccttaatcagtgccaggttaacacgacccaaattaaat |
300 |
Q |
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| T |
30483197 |
gttgtttagccatgtggttgctacttcatcattctgcgttttgcgaaatttgttattggtttccttaatcagtgccaggttaacacgacccaaattaaat |
30483296 |
T |
|
| Q |
301 |
ttatatcataaaaacttacaacacaagggacatgtctcctttgggcagccattaattgaggccataaggtaacaaggccatctctgactggtgccctaaa |
400 |
Q |
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| T |
30483297 |
tcatatcataaaaacttacaacacaagggacatgtctcctttgggcagccattaattgaggccataaggtaacaaggccatctctgactggtgccctaaa |
30483396 |
T |
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| Q |
401 |
aggccaagctctaccaaacatcctctttctcacttggagaggtctctctg |
450 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30483397 |
aggccaagctctaccaaacatcctctttctcacttggagaggtctctctg |
30483446 |
T |
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