View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3925_high_11 (Length: 254)

Name: NF3925_high_11
Description: NF3925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3925_high_11
NF3925_high_11
[»] chr2 (26 HSPs)
chr2 (3-237)||(22439308-22439539)
chr2 (25-74)||(39848178-39848227)
chr2 (36-75)||(18075398-18075437)
chr2 (24-75)||(38213862-38213913)
chr2 (23-74)||(44092364-44092415)
chr2 (25-75)||(4814485-4814535)
chr2 (24-74)||(6419489-6419539)
chr2 (24-74)||(7299350-7299400)
chr2 (24-74)||(26259825-26259875)
chr2 (5-77)||(15899259-15899336)
chr2 (3-74)||(2182275-2182346)
chr2 (24-74)||(38445875-38445925)
chr2 (30-75)||(17740104-17740149)
chr2 (37-74)||(32083770-32083807)
chr2 (19-72)||(35959841-35959894)
chr2 (30-74)||(2994575-2994619)
chr2 (24-76)||(36982954-36983006)
chr2 (3-74)||(45435039-45435110)
chr2 (25-75)||(1845651-1845701)
chr2 (24-74)||(6432054-6432104)
chr2 (25-75)||(9715935-9715985)
chr2 (24-74)||(21197739-21197789)
chr2 (24-74)||(29557892-29557942)
chr2 (24-74)||(29768825-29768875)
chr2 (23-75)||(1833899-1833951)
chr2 (30-74)||(5936389-5936433)
[»] chr1 (29 HSPs)
chr1 (3-74)||(42384684-42384755)
chr1 (3-74)||(38671684-38671755)
chr1 (24-74)||(18343097-18343147)
chr1 (30-75)||(13253726-13253771)
chr1 (24-74)||(12298673-12298723)
chr1 (23-75)||(13077810-13077862)
chr1 (3-75)||(44913098-44913170)
chr1 (5-72)||(7330079-7330146)
chr1 (24-75)||(18353520-18353571)
chr1 (30-74)||(23556278-23556322)
chr1 (30-74)||(42649572-42649616)
chr1 (23-74)||(5499517-5499568)
chr1 (28-75)||(6136361-6136408)
chr1 (24-75)||(19507584-19507635)
chr1 (24-75)||(31493058-31493109)
chr1 (24-75)||(46847235-46847286)
chr1 (24-75)||(52223202-52223253)
chr1 (25-75)||(3831923-3831973)
chr1 (24-74)||(6305550-6305600)
chr1 (24-74)||(8417704-8417754)
chr1 (24-74)||(10312519-10312569)
chr1 (24-74)||(17806285-17806335)
chr1 (24-74)||(37535846-37535896)
chr1 (24-74)||(39860062-39860112)
chr1 (24-74)||(39920139-39920189)
chr1 (24-74)||(50096639-50096689)
chr1 (33-74)||(5506409-5506450)
chr1 (34-75)||(5617031-5617072)
chr1 (23-75)||(44969485-44969537)
[»] scaffold0886 (1 HSPs)
scaffold0886 (24-76)||(1339-1391)
[»] chr7 (29 HSPs)
chr7 (3-75)||(41902381-41902453)
chr7 (3-74)||(31377864-31377935)
chr7 (24-75)||(5667610-5667661)
chr7 (3-74)||(15757201-15757272)
chr7 (24-75)||(21807025-21807076)
chr7 (23-72)||(32585331-32585380)
chr7 (3-74)||(13391553-13391624)
chr7 (24-74)||(3357414-3357464)
chr7 (24-74)||(8485506-8485556)
chr7 (24-74)||(36820538-36820588)
chr7 (24-74)||(43595709-43595759)
chr7 (40-77)||(18532970-18533007)
chr7 (30-74)||(10228406-10228450)
chr7 (30-74)||(45490002-45490046)
chr7 (24-75)||(11410995-11411046)
chr7 (23-74)||(12077604-12077655)
chr7 (24-74)||(1411119-1411169)
chr7 (24-74)||(2732769-2732819)
chr7 (33-75)||(12418921-12418963)
chr7 (24-74)||(14775805-14775855)
chr7 (24-74)||(15226258-15226308)
chr7 (24-74)||(23670694-23670743)
chr7 (24-74)||(27595178-27595228)
chr7 (24-74)||(33447051-33447101)
chr7 (24-74)||(34520856-34520906)
chr7 (24-74)||(41399330-41399380)
chr7 (25-74)||(28031634-28031683)
chr7 (30-74)||(4068327-4068371)
chr7 (30-74)||(35709508-35709552)
[»] chr8 (30 HSPs)
chr8 (3-74)||(32982769-32982840)
chr8 (10-74)||(10921468-10921532)
chr8 (3-74)||(23444886-23444957)
chr8 (24-74)||(14921903-14921953)
chr8 (25-74)||(40691566-40691615)
chr8 (25-69)||(39628472-39628516)
chr8 (25-69)||(39638022-39638066)
chr8 (3-74)||(16364529-16364600)
chr8 (30-77)||(41477987-41478034)
chr8 (24-74)||(12638509-12638559)
chr8 (24-74)||(13451205-13451255)
chr8 (24-74)||(31520512-31520562)
chr8 (25-74)||(2510862-2510911)
chr8 (30-74)||(24580984-24581028)
chr8 (30-74)||(40680886-40680930)
chr8 (25-68)||(10812302-10812345)
chr8 (24-75)||(12615589-12615640)
chr8 (24-75)||(23950743-23950794)
chr8 (24-75)||(33303377-33303428)
chr8 (24-74)||(4377694-4377744)
chr8 (29-83)||(31689754-31689807)
chr8 (40-74)||(32414983-32415017)
chr8 (24-74)||(32551205-32551255)
chr8 (24-74)||(36054243-36054293)
chr8 (24-74)||(38600366-38600416)
chr8 (24-74)||(39505932-39505982)
chr8 (24-69)||(7382720-7382765)
chr8 (25-74)||(22739006-22739055)
chr8 (30-74)||(11989502-11989546)
chr8 (30-74)||(36685152-36685196)
[»] chr3 (29 HSPs)
chr3 (3-74)||(39889798-39889869)
chr3 (3-74)||(41636786-41636857)
chr3 (3-74)||(50638987-50639058)
chr3 (10-74)||(18983905-18983969)
chr3 (24-75)||(24119832-24119883)
chr3 (24-74)||(52174404-52174454)
chr3 (30-75)||(36265376-36265421)
chr3 (24-75)||(19421414-19421465)
chr3 (24-75)||(24134292-24134343)
chr3 (23-74)||(26019921-26019972)
chr3 (24-75)||(26994331-26994382)
chr3 (24-75)||(36672381-36672432)
chr3 (24-75)||(39391524-39391575)
chr3 (24-79)||(54448102-54448157)
chr3 (24-74)||(1782283-1782333)
chr3 (24-74)||(4356563-4356613)
chr3 (24-74)||(25593215-25593265)
chr3 (40-74)||(28794135-28794169)
chr3 (24-74)||(29077316-29077366)
chr3 (24-74)||(33249889-33249939)
chr3 (24-74)||(34422289-34422339)
chr3 (24-74)||(41129261-41129311)
chr3 (24-74)||(51302886-51302936)
chr3 (24-74)||(54650893-54650943)
chr3 (30-74)||(7046309-7046353)
chr3 (30-74)||(41873860-41873904)
chr3 (30-74)||(42294651-42294695)
chr3 (30-74)||(46068468-46068512)
chr3 (30-74)||(47844984-47845028)
[»] scaffold0275 (1 HSPs)
scaffold0275 (24-76)||(9630-9682)
[»] chr6 (21 HSPs)
chr6 (10-74)||(27613720-27613784)
chr6 (3-74)||(1559103-1559174)
chr6 (24-75)||(32186873-32186924)
chr6 (24-74)||(14500537-14500587)
chr6 (24-75)||(3728648-3728699)
chr6 (24-74)||(12296521-12296571)
chr6 (32-74)||(34858670-34858712)
chr6 (23-75)||(13041256-13041308)
chr6 (24-75)||(4229370-4229421)
chr6 (24-75)||(28890504-28890555)
chr6 (24-74)||(1101725-1101775)
chr6 (24-74)||(3026885-3026935)
chr6 (24-74)||(5153768-5153818)
chr6 (25-67)||(9952417-9952459)
chr6 (24-74)||(13277037-13277087)
chr6 (25-75)||(13641208-13641258)
chr6 (24-74)||(17156756-17156806)
chr6 (24-74)||(24849324-24849374)
chr6 (36-73)||(1449319-1449356)
chr6 (30-71)||(8437189-8437230)
chr6 (34-74)||(478732-478772)
[»] chr5 (23 HSPs)
chr5 (3-75)||(40084480-40084552)
chr5 (24-75)||(18158916-18158967)
chr5 (29-72)||(31624678-31624721)
chr5 (11-72)||(38255227-38255288)
chr5 (10-74)||(7035587-7035651)
chr5 (24-74)||(6643766-6643816)
chr5 (24-74)||(27054034-27054084)
chr5 (24-74)||(36113651-36113701)
chr5 (25-75)||(40515177-40515227)
chr5 (24-76)||(27331743-27331795)
chr5 (43-75)||(32298262-32298294)
chr5 (24-75)||(7079469-7079520)
chr5 (25-76)||(15531320-15531371)
chr5 (24-74)||(491703-491753)
chr5 (24-74)||(15677713-15677763)
chr5 (24-74)||(17869593-17869643)
chr5 (24-74)||(24427131-24427181)
chr5 (25-75)||(25778187-25778237)
chr5 (24-74)||(31271616-31271666)
chr5 (24-74)||(42061931-42061981)
chr5 (25-74)||(28206864-28206913)
chr5 (30-74)||(10932074-10932118)
chr5 (27-75)||(36440803-36440851)
[»] chr4 (24 HSPs)
chr4 (30-74)||(48659864-48659908)
chr4 (14-74)||(20392460-20392520)
chr4 (24-75)||(12582636-12582687)
chr4 (24-74)||(9627963-9628013)
chr4 (24-74)||(47692052-47692102)
chr4 (30-75)||(50636712-50636757)
chr4 (25-74)||(55957296-55957345)
chr4 (30-74)||(17980832-17980876)
chr4 (24-75)||(3095047-3095098)
chr4 (23-74)||(4422582-4422633)
chr4 (28-75)||(34514536-34514583)
chr4 (24-75)||(40730037-40730088)
chr4 (24-75)||(41487921-41487972)
chr4 (35-74)||(45783467-45783506)
chr4 (40-74)||(8673224-8673258)
chr4 (24-74)||(10010468-10010518)
chr4 (24-78)||(20471856-20471910)
chr4 (32-74)||(25039721-25039763)
chr4 (24-74)||(37010607-37010657)
chr4 (24-74)||(38307673-38307723)
chr4 (24-74)||(48800839-48800889)
chr4 (33-74)||(29590025-29590066)
chr4 (30-74)||(518055-518099)
chr4 (30-74)||(16712206-16712250)
[»] scaffold0065 (1 HSPs)
scaffold0065 (23-71)||(40430-40478)
[»] scaffold0951 (1 HSPs)
scaffold0951 (24-78)||(3012-3066)


Alignment Details
Target: chr2 (Bit Score: 159; Significance: 9e-85; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 22439539 - 22439308
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccctacataatatatatcaggtccgtgttcaaa 102  Q
    ||||||||||||||| |||||||| |||| |||||| |||||||| ||||  ||| ||||||||||||| ||||||||||||||||| ||||||||||||    
T  22439539 tatctactaaacaggccagaccagactagaccgtaggcccctgtaagccggtctggcctattcccaacc-tacataatatatatcagatccgtgttcaaa 22439441  T
Q  103 tcccaaactccaaccnnnnnnntaaattaatacaatctcaaccaataggaaggaggggaggtgaagaaatgcttttgccctagaataaagcagaaaaata 202  Q
    |||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  22439440 tcccaaactccaaccaaaaaaataaattaatacaatctcaaccaataggaaggaggggaggtgaagaaatgcttttgccctagaataaagcag--aaata 22439343  T
Q  203 ttggagcttaatgcatgacgtgactctatcaaagg 237  Q
    |||||||||||||||||||||||||||||||||||    
T  22439342 ttggagcttaatgcatgacgtgactctatcaaagg 22439308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 39848227 - 39848178
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  39848227 aggctaggccgtagacccctgtaggccggcctgacctattcccatcccta 39848178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 18075437 - 18075398
Alignment:
Q  36 tagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18075437 tagacccctgtaggccgacctgacctattcccaaccctac 18075398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 38213862 - 38213913
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  38213862 caggccaggccatagacccctgtaggccggcctgacctattcccaaccctac 38213913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 44092415 - 44092364
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  44092415 ccaggccaggccgtagacccctgtaggtcgacctggcctattcccaacccta 44092364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 4814535 - 4814485
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  4814535 aggctaggccgtagacccctgtaggccgacctgatctatttccatccctac 4814485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 6419539 - 6419489
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  6419539 caggccaggccgtaggcccctgtaggccggcctgacctattcccaacccta 6419489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 7299350 - 7299400
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| |||||||||||| ||||||||||||||||||||||    
T  7299350 caggccaggccgtaggcccctgtaggccaacctgacctattcccaacccta 7299400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 26259875 - 26259825
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  26259875 caggccaggccgtaggcccctgtaggccggcctgacctattcccaacccta 26259825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 15899336 - 15899259
Alignment:
Q  5 tctactaaacaggtcagacca-----ggctaggccgtagacccctgtaggccgacctgacctattcccaaccctacat 77  Q
    |||||||||||||||||||||     ||| |||||| |||||||||||| ||| ||| ||||||||||||||||||||    
T  15899336 tctactaaacaggtcagaccatagcaggccaggccgcagacccctgtagaccggcctaacctattcccaaccctacat 15899259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 2182346 - 2182275
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||  ||| || ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  2182346 tatctactaaacagtccatgccatgccaggccgtaggcccctataggccgacctggcctattcccaacccta 2182275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 38445925 - 38445875
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  38445925 caggccaggccgtaggcccctgtaggccggcctggcctattcccaacccta 38445875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 17740149 - 17740104
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||    
T  17740149 aggccgtaggcccctgtatgccggcctgacctattcccaaccctac 17740104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 32083807 - 32083770
Alignment:
Q  37 agacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||||||||||| |||||||||||||||||||||    
T  32083807 agacccctgtaggccggcctgacctattcccaacccta 32083770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 35959841 - 35959894
Alignment:
Q  19 cagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccc 72  Q
    |||||||||||||| ||||| ||||||||||||  ||||||||||||| |||||    
T  35959841 cagaccaggctaggtcgtaggcccctgtaggccagcctgacctattcctaaccc 35959894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 2994619 - 2994575
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  2994619 aggccgtaggcccctgtaggccggcctggcctattcccaacccta 2994575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 36983006 - 36982954
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctaca 76  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||||    
T  36983006 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctaca 36982954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 45435039 - 45435110
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||| |||||| ||||||||| |||||||||   | |||| ||||||||||||||||    
T  45435039 tatctactaaacagtccagtccaggccaggccgtaggcccctgtagtgtggcctggcctattcccaacccta 45435110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 1845651 - 1845701
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||||||||||| |||||||||| || ||||| ||||||||| ||||||    
T  1845651 aggctaggccgtaggcccctgtaggtcggcctgatctattcccatccctac 1845701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 6432054 - 6432104
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||| |||||||||| |||||    
T  6432054 caggccaggccgtaggcccctgtaggccggcctggcctattcccatcccta 6432104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 9715985 - 9715935
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||||||||||| ||| |||||||||||||| |||||||| | ||||||    
T  9715985 aggctaggccgtaggcccttgtaggccgacctggcctattcctatccctac 9715935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 21197789 - 21197739
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  21197789 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 21197739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 29557892 - 29557942
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||||| ||||||||||| |||||||||||||||| ||||    
T  29557892 caggccaggccatagactcctgtaggccggcctgacctattcccaatccta 29557942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 29768825 - 29768875
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||| ||||||| |||| ||||||||||||||||    
T  29768825 caggccaggccgtaggcccctataggccggcctggcctattcccaacccta 29768875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 1833951 - 1833899
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||| |||| |||| |||||||||| || |||| |||||||||||||||||    
T  1833951 ccaggccaggctgtaggcccctgtaggtcggcctggcctattcccaaccctac 1833899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 5936433 - 5936389
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||| |||||||||||| ||||||||||||||||    
T  5936433 aggccataggcccctataggccgacctggcctattcccaacccta 5936389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 42384684 - 42384755
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||| |||||||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  42384684 tatctactaaacagtccaggccaggctaggccgtaggcccctgtaggccggcctggcctattcccaacccta 42384755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 38671755 - 38671684
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||| |||||| ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  38671755 tatctactaaacagtccaggccaggccaggccgtaggcccctgtaggccggcctggcctattcccaacccta 38671684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 18343097 - 18343147
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  18343097 caggccaggccgtaggcccctgtaggccgacctgacctattcccaacccta 18343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 13253726 - 13253771
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  13253726 aggccatagacccctgtaggccgacctgacctattcccaaccctac 13253771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 12298673 - 12298723
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  12298673 caggccaggccgtaggcccctgtaggccggcctgacctattcccaacccta 12298723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 13077810 - 13077862
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||| ||||||||| |||||||||||||| ||| |||||||||||||||||    
T  13077810 ccaggccaggccgtaggcccctgtaggccgatctggcctattcccaaccctac 13077862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 44913098 - 44913170
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||||||||||||  ||| |||||| || |||||| |||||||||| || |||| |||||||||||||||||    
T  44913098 tatctactaaacagtccaggccaggccagaccgtaggcccctgtaggtcggcctggcctattcccaaccctac 44913170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 7330079 - 7330146
Alignment:
Q  5 tctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccc 72  Q
    ||||||||||||| ||| |||||| ||| ||||| ||||| ||||||| |||| ||||||||||||||    
T  7330079 tctactaaacaggccaggccaggccaggtcgtaggcccctataggccggcctggcctattcccaaccc 7330146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 18353520 - 18353571
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  18353520 caggccaggccataggcccctgtaggccggcctgacctattcccaaccctac 18353571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 23556278 - 23556322
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||    
T  23556278 aggccgtaggcccctgtaggccagcctgacctattcccaacccta 23556322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 42649616 - 42649572
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  42649616 aggccgtaggcccctgtaggccggcctggcctattcccaacccta 42649572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 5499568 - 5499517
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||| |||| |||| ||||||||||||| |||| ||||||||||||||||    
T  5499568 ccaggccaggctgtaggcccctgtaggccggcctggcctattcccaacccta 5499517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 6136361 - 6136408
Alignment:
Q  28 ctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  6136361 ctaggccgtagacccttgtaggccgacctagcctattcccatccctac 6136408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 19507584 - 19507635
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||||||| ||||||||||||  |||| |||||||||||||||||    
T  19507584 caggccaggccgtaggcccctgtaggccagcctggcctattcccaaccctac 19507635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 31493109 - 31493058
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  31493109 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 31493058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 46847235 - 46847286
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  46847235 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 46847286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 52223202 - 52223253
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  52223202 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 52223253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 3831923 - 3831973
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  3831923 aggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 3831973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 6305550 - 6305600
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||| ||||||||||||| |||| ||||||||||||||||    
T  6305550 caggccaggtcgtaggcccctgtaggccggcctggcctattcccaacccta 6305600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 8417704 - 8417754
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  8417704 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 8417754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 10312519 - 10312569
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||  |||| ||||||||||||||||    
T  10312519 caggccaggccgtaggcccctgtaggccagcctggcctattcccaacccta 10312569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 17806285 - 17806335
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  17806285 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 17806335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 37535896 - 37535846
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||  |||| ||||||||||||||||    
T  37535896 caggccaggccgtaggcccctgtaggccagcctggcctattcccaacccta 37535846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 39860112 - 39860062
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  39860112 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 39860062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 39920139 - 39920189
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| |||||||||| || |||| ||||||||||||||||    
T  39920139 caggccaggccgtaggcccctgtaggtcggcctggcctattcccaacccta 39920189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 50096689 - 50096639
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  50096689 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 50096639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 5506450 - 5506409
Alignment:
Q  33 ccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||||||||||||||||||||  |||| ||||||||||    
T  5506450 ccgtagacccctgtaggccgacctggtctatccccaacccta 5506409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 5617031 - 5617072
Alignment:
Q  34 cgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||||||||||| |||| |||||||||||||||||    
T  5617031 cgtaggcccctgtaggccggcctggcctattcccaaccctac 5617072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 44969485 - 44969537
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||| || || ||| ||||||||||||| |||| |||||||||||||||||    
T  44969485 ccaggccagaccataggcccctgtaggccggcctggcctattcccaaccctac 44969537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 1391 - 1339
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctaca 76  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  1391 caggccaggccgtaggcccctgtaggccgacctgacctattcccaaccctaca 1339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 41902453 - 41902381
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||||||||||||  || ||||| |  |||| ||||||||||||||||||||||||||||||||||||||||    
T  41902453 tatctactaaacagtccaaaccagaccgggccatagacccctgtaggccgacctgacctattcccaaccctac 41902381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 31377864 - 31377935
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||| ||| | |||| ||||||||| |||||||||||| ||||| ||||||||||||||||    
T  31377864 tatctactaaacaggccaggctaggccaggccgtaggcccctgtaggccaacctggcctattcccaacccta 31377935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 5667610 - 5667661
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  5667610 caggccaggccgtaggcccctgtaggccggcctgacctattcccaaccctac 5667661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 15757272 - 15757201
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||| |||||| ||||||||| ||||||||||| | |||| ||||||||||||||||    
T  15757272 tatctactaaacagtccaggccaggccaggccgtaggcccctgtaggctggcctggcctattcccaacccta 15757201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 21807025 - 21807076
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||||||||||    
T  21807025 caggccaggccgtaggcccctgtaggccgacctgacttattcccaaccctac 21807076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 32585331 - 32585380
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccc 72  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  32585331 ccaggttaggccgtagacccctgtaggccgacctggcctatttccaaccc 32585380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 13391553 - 13391624
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||| |||||| ||||| ||| ||| ||||||||| |||| ||||||||||||||||    
T  13391553 tatctactaaacagtccaggccaggccaggccataggcccttgtaggccggcctggcctattcccaacccta 13391624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 3357414 - 3357464
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| |||||||||||||||||| ||||||||||||||||    
T  3357414 caggccaggccataggcccctgtaggccgacctggcctattcccaacccta 3357464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 8485556 - 8485506
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||||||||||||||||||||    
T  8485556 caggccaggccataggcccctgtaggccggcctgacctattcccaacccta 8485506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 36820588 - 36820538
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  36820588 caggctaggccataggcccctgtaggccggcctggcctattcccaacccta 36820538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 43595759 - 43595709
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| |||||||||||||||||||||| ||||  ||||||||||||||||    
T  43595759 caggccaggccgtagacccctgtaggccaacctagcctattcccaacccta 43595709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 18533007 - 18532970
Alignment:
Q  40 cccctgtaggccgacctgacctattcccaaccctacat 77  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  18533007 cccctgtaggccggcctgacctattcccaaccctacat 18532970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 10228406 - 10228450
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  10228406 aggccgtaggcccctgtaggccggcctggcctattcccaacccta 10228450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 45490046 - 45490002
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||    
T  45490046 aggccgtaggcccctgtaggccgatctggcctattcccaacccta 45490002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 11410995 - 11411046
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  11410995 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 11411046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 12077604 - 12077655
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  12077604 ccaggccaggccataggcccctgtaggccggcctggcctattcccaacccta 12077655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 1411169 - 1411119
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  1411169 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 1411119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 2732769 - 2732819
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  2732769 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 2732819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 12418963 - 12418921
Alignment:
Q  33 ccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||    
T  12418963 ccgtaggcccctgtaggccggcctgacctattcccaacactac 12418921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 14775855 - 14775805
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  14775855 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 14775805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 15226308 - 15226258
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  15226308 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 15226258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 23670743 - 23670694
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  23670743 caggccaggccgtaggcccctgtaggccg-cctggcctattcccaacccta 23670694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 27595228 - 27595178
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||| |||||||||| |||||    
T  27595228 caggccaggccgtaggcccctgtaggccggcctggcctattcccatcccta 27595178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 33447101 - 33447051
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||| |||||||||||||||||  ||||||||||||||||    
T  33447101 caggccaggtcgtaggcccctgtaggccgacctagcctattcccaacccta 33447051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 34520906 - 34520856
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  34520906 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 34520856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 41399380 - 41399330
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  41399380 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 41399330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 28031683 - 28031634
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||||| ||| ||| |||||||||||||||||||||| || |||||    
T  28031683 aggctaggccataggcccatgtaggccgacctgacctattcacatcccta 28031634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 4068327 - 4068371
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  4068327 aggccataggcccctgtaggccggcctggcctattcccaacccta 4068371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 35709552 - 35709508
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||||  |||||||| |||| ||||||||||||||||||||    
T  35709552 aggccgtaggtccctgtagaccgatctgacctattcccaacccta 35709508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 32982840 - 32982769
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||| |||||| ||||||||| ||||||||||||| | |||||||||||||||||||    
T  32982840 tatctactaaacagtccaggccaggccaggccgtaggcccctgtaggccggcttgacctattcccaacccta 32982769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 10921468 - 10921532
Alignment:
Q  10 taaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||||||| |||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  10921468 taaacaggtcaggccaggccaggccataggcccctgtaggccggcctggcctattcccaacccta 10921532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 23444886 - 23444957
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||| |||||| ||||||||| ||||||||||||| |||| |||||||| |||||||    
T  23444886 tatctactaaacagtccaggccaggccaggccgtaggcccctgtaggccggcctggcctattccgaacccta 23444957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 14921903 - 14921953
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  14921903 caggccaggccgtaggcccctgtaggccggcctgacctattcccaacccta 14921953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 40691566 - 40691615
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  40691566 aggctaggccgtaggcccctgtaggccggcctgacctattcccatcccta 40691615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 39628516 - 39628472
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaa 69  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  39628516 aggctaggccgtagacccctgtaggccggcctggcctattcccaa 39628472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 39638066 - 39638022
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaa 69  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  39638066 aggctaggccgtagacccctgtaggccggcctggcctattcccaa 39638022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 16364600 - 16364529
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||   ||  ||||| ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  16364600 tatctactaaacagtctaggtcaggccaggccgtaggcccctgtaggccggcctggcctattcccaacccta 16364529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 41478034 - 41477987
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaaccctacat 77  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  41478034 aggccgtaggcccctgtaggccggcctggcctattcccaaccctacat 41477987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 12638509 - 12638559
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||| |||||||||||||||||| ||||||||||||||||    
T  12638509 caggccaggtcgtaggcccctgtaggccgacctggcctattcccaacccta 12638559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 13451205 - 13451255
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||| |||| ||||| ||||| |||||||||||||||||||||||||||||    
T  13451205 caggttaggtcgtaggcccctataggccgacctgacctattcccaacccta 13451255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 31520512 - 31520562
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| |||||||||||||||||||| || |||| ||||||||||||||||    
T  31520512 caggccaggccgtagacccctgtaggtcggcctggcctattcccaacccta 31520562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 2510862 - 2510911
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||||||||| ||||||||||| | ||||||||||||||| |||||    
T  2510862 aggctaggccgtaggcccctgtaggctggcctgacctattcccatcccta 2510911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 24580984 - 24581028
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  24580984 aggccgtaggcccctgtaggccggcctggcctattcccaacccta 24581028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 40680886 - 40680930
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  40680886 aggccgtaggcccctgtaggccggcctggcctattcccaacccta 40680930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 10812302 - 10812345
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattccca 68  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  10812302 aggctaggccataggcccctgtaggccggcctgacctattccca 10812345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 12615589 - 12615640
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  12615589 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 12615640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 23950743 - 23950794
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  23950743 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 23950794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 33303428 - 33303377
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  33303428 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 33303377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 4377694 - 4377744
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||  ||||||||||||||||    
T  4377694 caggccaggccgtaggcccctgtaggccggcctagcctattcccaacccta 4377744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 31689754 - 31689807
Alignment:
Q  29 taggccgtagacccctgtaggccgacctgacctattcccaaccctacataatata 83  Q
    |||||| |||||||||||||| || ||||||||||||||| ||||| ||||||||    
T  31689754 taggccctagacccctgtaggtcggcctgacctattcccatcccta-ataatata 31689807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 32415017 - 32414983
Alignment:
Q  40 cccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||| |||||||||||||||||||||    
T  32415017 cccctgtaggccggcctgacctattcccaacccta 32414983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 32551255 - 32551205
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| | |||||||||||||||||||    
T  32551255 caggccaggccataggcccctgtaggccggcatgacctattcccaacccta 32551205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 36054293 - 36054243
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  36054293 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 36054243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 38600416 - 38600366
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||  |||| ||||||||||||||||    
T  38600416 caggccaggccgtaggcccctgtaggccagcctggcctattcccaacccta 38600366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 39505982 - 39505932
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||  ||||||||||||||||    
T  39505982 caggccaggccgtaggcccctgtaggccggcctagcctattcccaacccta 39505932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 7382765 - 7382720
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaa 69  Q
    ||||||||||||||| ||||||||||||| ||| || |||||||||    
T  7382765 caggctaggccgtaggcccctgtaggccggcctaacttattcccaa 7382720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 22739006 - 22739055
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||||| ||| ||||||||||||| |||| |||||||||| |||||    
T  22739006 aggctaggccataggcccctgtaggccggcctggcctattcccatcccta 22739055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 11989502 - 11989546
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  11989502 aggccataggcccctgtaggccggcctgccctattcccaacccta 11989546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 36685152 - 36685196
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  36685152 aggccataggcccctgtaggccggcctggcctattcccaacccta 36685196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 39889798 - 39889869
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||| |||||||||| ||| |||||| || |||||| ||||||||||||| |||||||||||||||||||||    
T  39889798 tatcaactaaacaggccaggccaggccagaccgtaggcccctgtaggccggcctgacctattcccaacccta 39889869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 41636786 - 41636857
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||| |||||| ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  41636786 tatctactaaacagtccaggccaggccaggccgtaggcccctgtaggccggcctggcctattcccaacccta 41636857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 50638987 - 50639058
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||| |||||| ||||||||| |||||||||| || |||| ||||||||||||||||    
T  50638987 tatctactaaacagtccaggccaggccaggccgtaggcccctgtaggtcggcctggcctattcccaacccta 50639058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 18983969 - 18983905
Alignment:
Q  10 taaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||| |||||||||| ||||| ||| ||| ||||||||| |||||| ||||||||||||||    
T  18983969 taaacaggccagaccaggccaggccataggcccttgtaggccggcctgacttattcccaacccta 18983905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 24119883 - 24119832
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||| ||||| |||||||||||||||||| |||||||||||||||||    
T  24119883 caggccaggtcgtaggcccctgtaggccgacctggcctattcccaaccctac 24119832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 52174454 - 52174404
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| |||||||||||||||||| ||||||||||||||||    
T  52174454 caggccaggccataggcccctgtaggccgacctggcctattcccaacccta 52174404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 36265421 - 36265376
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||    
T  36265421 aggccgtagacccctgtaggtcgacctggcctattcctaaccctac 36265376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 19421414 - 19421465
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  19421414 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 19421465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 24134292 - 24134343
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||||||| ||||||||||||| |||| |||||||||| ||||||    
T  24134292 caggccaggccgtaggcccctgtaggccggcctggcctattcccatccctac 24134343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 26019972 - 26019921
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||| ||||||||| |||||||| |||| |||| ||||||||||||||||    
T  26019972 ccaggccaggccgtaggcccctgtaagccggcctggcctattcccaacccta 26019921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 26994382 - 26994331
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||||||| || |||||||||| |||| |||||||||||||||||    
T  26994382 caggccaggccgtaggcctctgtaggccggcctggcctattcccaaccctac 26994331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 36672432 - 36672381
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| || |||||| ||||||||||||| |||| |||||||||||||||||    
T  36672432 caggccagaccgtaggcccctgtaggccggcctggcctattcccaaccctac 36672381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 39391524 - 39391575
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  39391524 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 39391575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 54448102 - 54448157
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctacataa 79  Q
    ||||| ||||||||| ||||||||||||| |||| ||||||| |||||||| ||||    
T  54448102 caggccaggccgtaggcccctgtaggccggcctggcctattcgcaaccctatataa 54448157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 1782333 - 1782283
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  1782333 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 1782283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 4356613 - 4356563
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||  |||| ||||||||||||||||    
T  4356613 caggccaggccgtaggcccctgtaggccagcctggcctattcccaacccta 4356563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 25593265 - 25593215
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| || |||||| |||| ||||||||||||| ||||||||||||||||    
T  25593265 caggccagaccgtaggccccagtaggccgacctggcctattcccaacccta 25593215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 28794135 - 28794169
Alignment:
Q  40 cccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||| |||||||||||||||||||||    
T  28794135 cccctgtaggccggcctgacctattcccaacccta 28794169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 29077316 - 29077366
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  29077316 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 29077366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 33249889 - 33249939
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  33249889 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 33249939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 34422339 - 34422289
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||||||| ||||||||||||    
T  34422339 caggccaggccataggcccctgtaggccggcctgacctcttcccaacccta 34422289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 41129311 - 41129261
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||| |||||||| |||  |||| ||||||||||||||||    
T  41129311 caggctaggccgtaggcccctgtatgccagcctggcctattcccaacccta 41129261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 51302886 - 51302936
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||| ||||||||||||| |||| ||||||||||||||||    
T  51302886 caggccaggtcgtaggcccctgtaggccggcctggcctattcccaacccta 51302936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 54650893 - 54650943
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| ||||| |||||||||||||||    
T  54650893 caggccaggccataggcccctgtaggccggcctgatctattcccaacccta 54650943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 7046353 - 7046309
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||| |||| ||||||||||||| |||| ||||||||||||||||    
T  7046353 aggctgtaggcccctgtaggccggcctggcctattcccaacccta 7046309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 41873860 - 41873904
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  41873860 aggccataggcccctgtaggccggcctggcctattcccaacccta 41873904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 42294651 - 42294695
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| ||||||||||||| |||| |||||||||| |||||    
T  42294651 aggccgtaggcccctgtaggccggcctggcctattcccatcccta 42294695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 46068468 - 46068512
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  46068468 aggccataggcccctgtaggccggcctggcctattcccaacccta 46068512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 47844984 - 47845028
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  47844984 aggccataggcccctgtaggccggcctggcctattcccaacccta 47845028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 9630 - 9682
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctaca 76  Q
    |||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  9630 caggctaggccgtagatccttgtaggccggcctgacctattcccaaccctaca 9682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 27613720 - 27613784
Alignment:
Q  10 taaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||| ||| |||||| ||||| ||| ||||||||||||| |||||||||||||||||||||    
T  27613720 taaacaggccaggccaggccaggccataggcccctgtaggccggcctgacctattcccaacccta 27613784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 1559103 - 1559174
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||  ||| |||||| ||||||||| ||||||||||| | |||| ||||||||||||||||    
T  1559103 tatctactaaacagtccaggccaggccaggccgtaggcccctgtaggctggcctggcctattcccaacccta 1559174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 32186924 - 32186873
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  32186924 caggccaggccgtaggcccctgtaggccggcctgacctattcccaaccctac 32186873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 14500537 - 14500587
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  14500537 caggctaggccgtaggcccctataggccgatctgacctattcccaacccta 14500587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 3728699 - 3728648
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  3728699 caggccaggccatagacccctgtaggccggcctgacctattccaaaccctac 3728648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 12296571 - 12296521
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| |||||||||| ||||||||||||||||||||||||    
T  12296571 caggccaggccataggcccctgtaggtcgacctgacctattcccaacccta 12296521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 34858670 - 34858712
Alignment:
Q  32 gccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  34858670 gccgtaggcccctgtaggccggcctgacctattcccaacccta 34858712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 13041308 - 13041256
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||| ||||||||| |||||||||||||  ||| |||||||||||||||||    
T  13041308 ccaggccaggccgtaggcccctgtaggccggtctggcctattcccaaccctac 13041256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 4229421 - 4229370
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||||||| ||| ||||||||| |||| |||||||||||||||||    
T  4229421 caggccaggccgtaggcccatgtaggccggcctggcctattcccaaccctac 4229370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 28890555 - 28890504
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  28890555 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 28890504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 1101725 - 1101775
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||  ||||||||||||||||    
T  1101725 caggccaggccgtaggcccctgtaggccggcctagcctattcccaacccta 1101775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 3026935 - 3026885
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  3026935 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 3026885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 5153768 - 5153818
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  5153768 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 5153818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 9952459 - 9952417
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattccc 67  Q
    |||||||||||||| ||||||| | ||||||||||||||||||    
T  9952459 aggctaggccgtaggcccctgttgaccgacctgacctattccc 9952417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 13277037 - 13277087
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  13277037 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 13277087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 13641208 - 13641258
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||||||| ||| ||||||||||||| |||||||||||| || ||||||    
T  13641208 aggctaggccctaggcccctgtaggccggcctgacctattctcatccctac 13641258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 17156756 - 17156806
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||  |||| ||||||||||||||||    
T  17156756 caggccaggccgtaggcccctgtaggccagcctggcctattcccaacccta 17156806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 24849324 - 24849374
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  24849324 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 24849374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 1449356 - 1449319
Alignment:
Q  36 tagacccctgtaggccgacctgacctattcccaaccct 73  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  1449356 tagacccctgtaggccggcctggcctattcccaaccct 1449319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 8437230 - 8437189
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacc 71  Q
    ||||| ||| |||||||||||||||||| |||||||||||||    
T  8437230 aggccataggcccctgtaggccgacctggcctattcccaacc 8437189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 478772 - 478732
Alignment:
Q  34 cgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||||||||| | || ||||||||||||||||    
T  478772 cgtagacccctgtaggccggcatggcctattcccaacccta 478732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 40084480 - 40084552
Alignment:
Q  3 tatctactaaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||||||||||||  ||| |||||| ||||||||| ||||||||||| | |||| |||||||||||||||||    
T  40084480 tatctactaaacagtccaggccaggccaggccgtaggcccctgtaggctggcctggcctattcccaaccctac 40084552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 18158916 - 18158967
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  18158916 caggctaggccgtaggcccctgtaggccggcctggcctattcccaaccctac 18158967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 31624678 - 31624721
Alignment:
Q  29 taggccgtagacccctgtaggccgacctgacctattcccaaccc 72  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  31624678 taggccgtagacccctgtaggccggcctgacctattcccaaccc 31624721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 38255227 - 38255288
Alignment:
Q  11 aaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaaccc 72  Q
    |||||||||| | ||||| |||||||||||||||||||  || |||||||||||||||||||    
T  38255227 aaacaggtcaaaacaggccaggccgtagacccctgtagatcggcctgacctattcccaaccc 38255288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 7035587 - 7035651
Alignment:
Q  10 taaacaggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||||||  ||||| || || ||||||||||||||||| |||| ||||||||||||||||    
T  7035587 taaacaggtcaggtcaggccagaccatagacccctgtaggccggcctggcctattcccaacccta 7035651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 6643816 - 6643766
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||||||||||||||||||||    
T  6643816 caggccaggccataggcccctgtaggccggcctgacctattcccaacccta 6643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 27054084 - 27054034
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  27054084 caggccaggccgtaggcccctgtaggccggcctggcctattcccaacccta 27054034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 36113651 - 36113701
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  36113651 caggccaggccgtaggcccctgtaggccggcctggcctattcccaacccta 36113701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 40515177 - 40515227
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||||||| |||||| |||||||||| ||||||||||||||| ||||||    
T  40515177 aggctaggccatagacctctgtaggccggcctgacctattcccatccctac 40515227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 27331795 - 27331743
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctaca 76  Q
    ||||| |||| |||| |||||||||||||||||  ||||||||||||||||||    
T  27331795 caggccaggctgtaggcccctgtaggccgacctagcctattcccaaccctaca 27331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 32298294 - 32298262
Alignment:
Q  43 ctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||||||||||||||||||||||||||||||    
T  32298294 ctgtaggccgacctgacctattcccaaccctac 32298262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 7079469 - 7079520
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  7079469 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 7079520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 15531320 - 15531371
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaaccctaca 76  Q
    |||||||| ||||| ||||||||||||| || |||||||||||| |||||||    
T  15531320 aggctaggtcgtaggcccctgtaggccggccagacctattcccatccctaca 15531371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 491703 - 491753
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  491703 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 491753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 15677763 - 15677713
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  15677763 caggccaggccctaggcccctgtaggccggcctggcctattcccaacccta 15677713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 17869643 - 17869593
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||| ||||||| |||| ||||||||||||||||    
T  17869643 caggccaggccgtaggcccctataggccggcctggcctattcccaacccta 17869593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 24427181 - 24427131
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||||||| ||||||||||||| |||  ||||||||||||||||    
T  24427181 caggccaggccgtaggcccctgtaggccggcctagcctattcccaacccta 24427131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 25778187 - 25778237
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||||||||||| ||| ||||||||| |||| |||||||||| ||||||    
T  25778187 aggctaggccgtaggcccttgtaggccggcctggcctattcccatccctac 25778237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 31271616 - 31271666
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  31271616 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 31271666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 42061981 - 42061931
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  42061981 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 42061931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 28206913 - 28206864
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||||| ||| |||||||||| || ||||||||||||||| |||||    
T  28206913 aggctaggccataggcccctgtaggtcggcctgacctattcccatcccta 28206864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 10932074 - 10932118
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| |||||||||||||||||  ||||||||||||||||    
T  10932074 aggccataggcccctgtaggccgacctagcctattcccaacccta 10932118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 36440803 - 36440851
Alignment:
Q  27 gctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||| ||||| ||||||||||| | ||||||||||||||| ||||||    
T  36440803 gctaggtcgtaggcccctgtaggctggcctgacctattcccatccctac 36440851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 48659864 - 48659908
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  48659864 aggccgtaggcccctgtaggccgacctgacctattcccaacccta 48659908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 20392520 - 20392460
Alignment:
Q  14 caggtcagaccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||| | ||||| ||||||||||||||||||||||| | || ||||||||||||||||    
T  20392520 caggtcaaaacaggccaggccgtagacccctgtaggccggcttggcctattcccaacccta 20392460  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 12582636 - 12582687
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||||||| ||||||||||||| |||| |||||||||||||||||    
T  12582636 caggccaggccgtaggcccctgtaggccggcctggcctattcccaaccctac 12582687  T

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Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 9627963 - 9628013
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| |||||||||||||||||| ||||||||||||||||    
T  9627963 caggccaggccataggcccctgtaggccgacctggcctattcccaacccta 9628013  T

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Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 47692052 - 47692102
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||||||||||||||||| |||| ||||||||||||||||    
T  47692052 caggccaggccatagacccctgtaggccggcctggcctattcccaacccta 47692102  T

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Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 50636757 - 50636712
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||    
T  50636757 aggccgtaggcccctgtaggccggcttgacctattcccaaccctac 50636712  T

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Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 55957345 - 55957296
Alignment:
Q  25 aggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||||| |||||||||||||| |||| ||||||||||||||| |||||    
T  55957345 aggctaggtcgtagacccctgtaagccggcctgacctattcccatcccta 55957296  T

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Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 17980876 - 17980832
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  17980876 aggccgtaggcccctgtaggccggcctggcctattcccaacccta 17980832  T

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Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 3095098 - 3095047
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  3095098 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 3095047  T

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Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 4422582 - 4422633
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||| || |||||| |||||||||||| |||| |||||||||||||||||    
T  4422582 ccaggccagaccgtaggcccctgtaggccaacctaacctattcccaacccta 4422633  T

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Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 34514536 - 34514583
Alignment:
Q  28 ctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    |||||||||||| |||||||| ||||||||||||||| ||| ||||||    
T  34514536 ctaggccgtagagccctgtagaccgacctgacctattaccacccctac 34514583  T

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Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 40730088 - 40730037
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  40730088 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 40730037  T

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Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 41487921 - 41487972
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctac 75  Q
    ||||| ||||| ||| ||||||||||||| |||| |||||||||||||||||    
T  41487921 caggccaggccataggcccctgtaggccggcctggcctattcccaaccctac 41487972  T

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Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 45783506 - 45783467
Alignment:
Q  35 gtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  45783506 gtaggcccctgtaggccggcctgacctattcccaacccta 45783467  T

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Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 8673224 - 8673258
Alignment:
Q  40 cccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| |||||||||||||||||||||||||    
T  8673224 cccctgtagaccgacctgacctattcccaacccta 8673258  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 10010518 - 10010468
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  10010518 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 10010468  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 20471910 - 20471856
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctacata 78  Q
    ||||| ||| |||||||||||||| |||  ||| |||||||||||||||||||||    
T  20471910 caggccaggtcgtagacccctgtaagccagcctaacctattcccaaccctacata 20471856  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 25039763 - 25039721
Alignment:
Q  32 gccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||| |||||||||||||  ||||||||||||||||||||    
T  25039763 gccgtaggcccctgtaggccggtctgacctattcccaacccta 25039721  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 37010657 - 37010607
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  37010657 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 37010607  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 38307723 - 38307673
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  38307723 caggccaggccataggcccctgtaggccggcctggcctattcccaacccta 38307673  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 48800889 - 48800839
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||||| |||||||||||||||||||||  ||||||||||| ||||    
T  48800889 caggccaggccatagacccctgtaggccgacctagcctattcccaatccta 48800839  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 29590066 - 29590025
Alignment:
Q  33 ccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    |||||| ||||||||||||| ||| |||||||||||||||||    
T  29590066 ccgtaggcccctgtaggccggcctaacctattcccaacccta 29590025  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 518055 - 518099
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||||||| || |||||||||| ||||| |||||||||||||||    
T  518055 aggccgtaggccactgtaggccggcctgaactattcccaacccta 518099  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 16712206 - 16712250
Alignment:
Q  30 aggccgtagacccctgtaggccgacctgacctattcccaacccta 74  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  16712206 aggccataggcccctgtaggccggcctggcctattcccaacccta 16712250  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 40430 - 40478
Alignment:
Q  23 ccaggctaggccgtagacccctgtaggccgacctgacctattcccaacc 71  Q
    |||||| ||||| ||| ||||||||||||| ||||||||||||||||||    
T  40430 ccaggccaggccataggcccctgtaggccggcctgacctattcccaacc 40478  T

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Target: scaffold0951 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 3066 - 3012
Alignment:
Q  24 caggctaggccgtagacccctgtaggccgacctgacctattcccaaccctacata 78  Q
    ||||| ||| |||||||||||||| |||  ||| |||||||||||||||||||||    
T  3066 caggccaggtcgtagacccctgtaagccagcctaacctattcccaaccctacata 3012  T

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