View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3925_low_2 (Length: 546)

Name: NF3925_low_2
Description: NF3925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3925_low_2
NF3925_low_2
[»] chr5 (53 HSPs)
chr5 (231-534)||(32009879-32010192)
chr5 (62-230)||(32009750-32009918)
chr5 (65-155)||(9107150-9107240)
chr5 (36-156)||(32942625-32942745)
chr5 (61-156)||(10640009-10640104)
chr5 (61-156)||(16937802-16937897)
chr5 (383-445)||(42568942-42569004)
chr5 (19-70)||(32009681-32009733)
chr5 (79-162)||(39594881-39594964)
chr5 (61-154)||(6096603-6096696)
chr5 (65-162)||(12857251-12857348)
chr5 (396-448)||(10640062-10640114)
chr5 (79-159)||(41419393-41419473)
chr5 (79-159)||(41534512-41534592)
chr5 (79-142)||(35445777-35445840)
chr5 (61-119)||(16457935-16457993)
chr5 (406-440)||(40335790-40335824)
chr5 (396-437)||(9107199-9107240)
chr5 (65-162)||(12857618-12857715)
chr5 (398-439)||(32197844-32197885)
chr5 (81-161)||(32941545-32941626)
chr5 (79-156)||(34736446-34736523)
chr5 (39-71)||(12857733-12857765)
chr5 (255-319)||(13697852-13697916)
chr5 (35-71)||(37954692-37954728)
chr5 (255-318)||(3735585-3735648)
chr5 (65-156)||(7705917-7706008)
chr5 (400-439)||(34198534-34198573)
chr5 (36-71)||(42582919-42582954)
chr5 (84-142)||(15015922-15015980)
chr5 (82-156)||(32010022-32010096)
chr5 (396-438)||(39594916-39594958)
chr5 (401-439)||(40111382-40111420)
chr5 (317-354)||(32009696-32009733)
chr5 (34-71)||(32009967-32010004)
chr5 (42-71)||(42500269-42500298)
chr5 (82-154)||(7674724-7674796)
chr5 (396-440)||(7705915-7705959)
chr5 (73-141)||(7985037-7985105)
chr5 (407-439)||(14331486-14331518)
chr5 (250-318)||(16458072-16458140)
chr5 (396-440)||(16937800-16937844)
chr5 (35-71)||(16937911-16937947)
chr5 (400-440)||(17369316-17369356)
chr5 (35-71)||(24030429-24030465)
chr5 (35-71)||(25461675-25461711)
chr5 (43-71)||(29925855-29925883)
chr5 (406-442)||(34417841-34417877)
chr5 (112-156)||(35299872-35299916)
chr5 (396-440)||(35299874-35299918)
chr5 (169-205)||(37954580-37954616)
chr5 (409-437)||(39105587-39105615)
chr5 (35-71)||(43300884-43300920)
[»] chr1 (72 HSPs)
chr1 (61-156)||(37617384-37617479)
chr1 (61-156)||(2295152-2295247)
chr1 (59-156)||(3233934-3234031)
chr1 (101-153)||(7244576-7244628)
chr1 (79-142)||(38001669-38001732)
chr1 (82-157)||(50644173-50644248)
chr1 (65-150)||(49938807-49938892)
chr1 (81-156)||(2295266-2295342)
chr1 (35-71)||(3234043-3234079)
chr1 (67-155)||(24334257-24334345)
chr1 (61-157)||(27146173-27146269)
chr1 (270-317)||(33835605-33835652)
chr1 (270-317)||(33914159-33914206)
chr1 (79-157)||(7069490-7069568)
chr1 (61-162)||(3887545-3887646)
chr1 (79-156)||(7941680-7941757)
chr1 (87-156)||(33204313-33204382)
chr1 (30-70)||(15609074-15609114)
chr1 (35-71)||(17603412-17603448)
chr1 (96-156)||(28287890-28287950)
chr1 (407-439)||(30013997-30014029)
chr1 (271-318)||(30582042-30582090)
chr1 (35-71)||(42174861-42174897)
chr1 (35-71)||(49938753-49938789)
chr1 (407-438)||(172492-172523)
chr1 (254-309)||(2295016-2295071)
chr1 (406-445)||(5894103-5894142)
chr1 (36-95)||(5894159-5894218)
chr1 (399-438)||(6292604-6292643)
chr1 (65-156)||(14576573-14576664)
chr1 (407-438)||(29045852-29045883)
chr1 (36-71)||(34795453-34795488)
chr1 (36-71)||(37631587-37631622)
chr1 (84-155)||(39976130-39976201)
chr1 (398-437)||(44115825-44115864)
chr1 (279-318)||(47432033-47432072)
chr1 (383-438)||(50644174-50644229)
chr1 (84-154)||(1432594-1432664)
chr1 (65-147)||(6557032-6557114)
chr1 (398-436)||(23445444-23445482)
chr1 (254-316)||(37631655-37631717)
chr1 (319-356)||(3234042-3234079)
chr1 (30-71)||(5709570-5709611)
chr1 (38-71)||(5741615-5741648)
chr1 (271-316)||(7862007-7862052)
chr1 (399-440)||(10199325-10199366)
chr1 (59-152)||(13810052-13810145)
chr1 (62-139)||(17603320-17603397)
chr1 (396-437)||(24334304-24334345)
chr1 (89-138)||(30192027-30192076)
chr1 (83-156)||(33186384-33186457)
chr1 (409-438)||(37617384-37617413)
chr1 (396-437)||(39976130-39976171)
chr1 (397-438)||(41505784-41505825)
chr1 (35-71)||(473170-473206)
chr1 (82-154)||(489267-489339)
chr1 (35-71)||(1510338-1510374)
chr1 (396-440)||(2295300-2295344)
chr1 (407-435)||(2522716-2522744)
chr1 (20-71)||(13809988-13810040)
chr1 (383-435)||(15784413-15784465)
chr1 (400-436)||(17009503-17009539)
chr1 (122-154)||(17631025-17631057)
chr1 (100-155)||(24417655-24417711)
chr1 (409-437)||(24417655-24417683)
chr1 (400-440)||(26184856-26184896)
chr1 (400-436)||(30257797-30257833)
chr1 (383-439)||(33204312-33204368)
chr1 (273-317)||(34795520-34795564)
chr1 (35-71)||(36872738-36872774)
chr1 (231-315)||(37473288-37473372)
chr1 (106-150)||(38116002-38116046)
[»] chr7 (56 HSPs)
chr7 (62-156)||(19302482-19302576)
chr7 (59-118)||(27288001-27288060)
chr7 (256-315)||(46078061-46078120)
chr7 (81-162)||(20526522-20526603)
chr7 (254-318)||(33128669-33128733)
chr7 (65-156)||(4970711-4970802)
chr7 (59-118)||(22940013-22940072)
chr7 (65-155)||(34464141-34464231)
chr7 (63-156)||(5947299-5947392)
chr7 (29-66)||(21568528-21568565)
chr7 (61-142)||(33601343-33601424)
chr7 (59-156)||(34035971-34036068)
chr7 (396-441)||(44822067-44822112)
chr7 (35-71)||(19022613-19022649)
chr7 (82-162)||(33266399-33266479)
chr7 (231-318)||(4970882-4970969)
chr7 (87-142)||(18765366-18765421)
chr7 (36-71)||(46280300-46280335)
chr7 (61-156)||(48470100-48470195)
chr7 (105-162)||(11782956-11783013)
chr7 (117-162)||(19624289-19624334)
chr7 (65-142)||(27863658-27863735)
chr7 (107-156)||(44822060-44822109)
chr7 (396-440)||(19302480-19302524)
chr7 (399-439)||(28691754-28691794)
chr7 (400-440)||(30812251-30812291)
chr7 (61-156)||(45593584-45593680)
chr7 (61-137)||(48140259-48140335)
chr7 (61-116)||(21568454-21568509)
chr7 (320-359)||(46280296-46280335)
chr7 (59-133)||(19022527-19022601)
chr7 (62-120)||(19214361-19214419)
chr7 (396-438)||(33266405-33266447)
chr7 (84-138)||(33287919-33287973)
chr7 (61-139)||(33601963-33602041)
chr7 (82-120)||(44989632-44989670)
chr7 (232-318)||(45806571-45806657)
chr7 (398-443)||(992188-992233)
chr7 (383-436)||(9210917-9210970)
chr7 (319-356)||(19022612-19022649)
chr7 (409-438)||(20526568-20526597)
chr7 (383-436)||(45338549-45338602)
chr7 (408-436)||(7612551-7612579)
chr7 (35-71)||(19214434-19214470)
chr7 (232-312)||(21568728-21568808)
chr7 (398-438)||(24048651-24048691)
chr7 (82-149)||(25670512-25670580)
chr7 (122-162)||(33645873-33645913)
chr7 (35-71)||(34744034-34744070)
chr7 (65-141)||(34744088-34744164)
chr7 (400-436)||(39551469-39551505)
chr7 (35-71)||(40377880-40377916)
chr7 (320-356)||(43694597-43694633)
chr7 (410-438)||(44917445-44917473)
chr7 (35-71)||(45790453-45790489)
chr7 (412-440)||(47134675-47134703)
[»] chr8 (53 HSPs)
chr8 (81-154)||(43717855-43717928)
chr8 (61-156)||(38648407-38648502)
chr8 (396-446)||(38602436-38602486)
chr8 (383-440)||(30251371-30251428)
chr8 (79-156)||(30251373-30251450)
chr8 (43-92)||(32213171-32213220)
chr8 (67-162)||(922319-922415)
chr8 (61-133)||(28763424-28763496)
chr8 (65-161)||(36963268-36963364)
chr8 (85-156)||(1096570-1096641)
chr8 (65-120)||(26771325-26771380)
chr8 (36-71)||(30657800-30657835)
chr8 (89-156)||(38602411-38602478)
chr8 (396-438)||(1074187-1074229)
chr8 (62-152)||(6525874-6525964)
chr8 (67-156)||(35534532-35534621)
chr8 (407-439)||(10727464-10727496)
chr8 (396-440)||(15180648-15180692)
chr8 (59-142)||(1058010-1058093)
chr8 (231-318)||(1058168-1058255)
chr8 (35-70)||(6525823-6525858)
chr8 (65-156)||(10758176-10758267)
chr8 (72-142)||(11376769-11376840)
chr8 (396-439)||(14280339-14280382)
chr8 (81-120)||(27754479-27754518)
chr8 (105-156)||(30657696-30657747)
chr8 (61-156)||(35643907-35644002)
chr8 (396-438)||(1096599-1096641)
chr8 (396-434)||(6525926-6525964)
chr8 (67-125)||(6881989-6882047)
chr8 (99-157)||(9130237-9130295)
chr8 (35-69)||(12976219-12976253)
chr8 (98-156)||(15180632-15180690)
chr8 (407-445)||(16162880-16162918)
chr8 (272-318)||(35534705-35534750)
chr8 (61-155)||(40859703-40859796)
chr8 (399-436)||(1433648-1433685)
chr8 (407-440)||(5349503-5349536)
chr8 (400-437)||(6496811-6496848)
chr8 (407-440)||(7008718-7008751)
chr8 (383-440)||(35534530-35534587)
chr8 (62-139)||(35749506-35749583)
chr8 (399-440)||(43368617-43368658)
chr8 (39-71)||(6881936-6881968)
chr8 (35-71)||(11861810-11861846)
chr8 (35-71)||(15180547-15180583)
chr8 (396-440)||(15247694-15247738)
chr8 (39-71)||(18133666-18133698)
chr8 (320-356)||(30657799-30657835)
chr8 (396-440)||(35374369-35374413)
chr8 (82-142)||(38750434-38750494)
chr8 (407-439)||(40728329-40728361)
chr8 (396-440)||(44843396-44843440)
[»] chr4 (80 HSPs)
chr4 (36-156)||(42403942-42404061)
chr4 (59-155)||(15173223-15173319)
chr4 (61-157)||(41336816-41336912)
chr4 (82-154)||(52315118-52315190)
chr4 (61-156)||(17822784-17822879)
chr4 (61-156)||(54426099-54426194)
chr4 (396-438)||(41336869-41336911)
chr4 (65-154)||(22030263-22030352)
chr4 (79-162)||(27043743-27043826)
chr4 (62-156)||(21731575-21731669)
chr4 (399-445)||(22662163-22662209)
chr4 (399-445)||(22666642-22666688)
chr4 (61-162)||(24169319-24169420)
chr4 (81-142)||(40174633-40174694)
chr4 (35-71)||(9760446-9760482)
chr4 (61-161)||(13126490-13126590)
chr4 (61-157)||(39603089-39603184)
chr4 (81-156)||(8705017-8705092)
chr4 (397-440)||(25571369-25571412)
chr4 (396-439)||(27043748-27043791)
chr4 (82-156)||(55437153-55437227)
chr4 (38-71)||(26892-26925)
chr4 (30-71)||(33586983-33587024)
chr4 (79-156)||(49940086-49940163)
chr4 (254-319)||(50681182-50681247)
chr4 (406-438)||(3891710-3891742)
chr4 (399-439)||(9720572-9720612)
chr4 (274-318)||(9760372-9760416)
chr4 (399-439)||(26590636-26590676)
chr4 (35-71)||(39603198-39603234)
chr4 (396-440)||(42403940-42403984)
chr4 (396-436)||(52315118-52315158)
chr4 (35-71)||(54426049-54426085)
chr4 (396-440)||(55437185-55437229)
chr4 (408-439)||(7367972-7368003)
chr4 (271-318)||(13216298-13216345)
chr4 (397-440)||(17822782-17822825)
chr4 (61-148)||(25904150-25904237)
chr4 (61-120)||(49939906-49939965)
chr4 (61-120)||(50681044-50681103)
chr4 (399-438)||(52169939-52169978)
chr4 (407-438)||(52428784-52428815)
chr4 (82-156)||(437083-437157)
chr4 (383-437)||(15173223-15173277)
chr4 (35-69)||(21731686-21731720)
chr4 (35-69)||(40831059-40831093)
chr4 (82-156)||(53294033-53294107)
chr4 (277-318)||(403462-403503)
chr4 (79-140)||(1706696-1706757)
chr4 (42-71)||(2244064-2244093)
chr4 (319-356)||(9760446-9760483)
chr4 (35-72)||(17884074-17884111)
chr4 (79-120)||(20719777-20719818)
chr4 (396-449)||(21731564-21731617)
chr4 (79-156)||(29774314-29774391)
chr4 (399-436)||(37636107-37636144)
chr4 (383-440)||(39691066-39691123)
chr4 (319-356)||(39691170-39691207)
chr4 (383-432)||(40174653-40174702)
chr4 (257-318)||(43505871-43505932)
chr4 (38-71)||(46588101-46588134)
chr4 (38-71)||(46592237-46592270)
chr4 (407-439)||(679411-679443)
chr4 (383-439)||(2244147-2244203)
chr4 (20-71)||(7839389-7839441)
chr4 (410-438)||(12163006-12163034)
chr4 (412-440)||(16494724-16494752)
chr4 (35-71)||(17822893-17822929)
chr4 (109-157)||(20031854-20031902)
chr4 (407-439)||(28615454-28615486)
chr4 (396-440)||(29388723-29388767)
chr4 (399-439)||(32071975-32072015)
chr4 (410-438)||(37575855-37575883)
chr4 (169-205)||(39603598-39603634)
chr4 (35-71)||(39691171-39691207)
chr4 (399-439)||(41433487-41433527)
chr4 (383-439)||(49940085-49940141)
chr4 (35-71)||(50681117-50681153)
chr4 (125-157)||(52169938-52169970)
chr4 (396-440)||(54426152-54426196)
[»] chr3 (66 HSPs)
chr3 (61-152)||(31365111-31365202)
chr3 (43-156)||(43046704-43046815)
chr3 (62-152)||(31365232-31365322)
chr3 (35-120)||(49034242-49034327)
chr3 (62-142)||(18405764-18405844)
chr3 (383-439)||(25447163-25447219)
chr3 (100-156)||(25447164-25447220)
chr3 (231-318)||(24684917-24685004)
chr3 (231-318)||(30956720-30956807)
chr3 (231-318)||(30972532-30972619)
chr3 (59-156)||(20257590-20257688)
chr3 (35-71)||(901930-901966)
chr3 (396-436)||(26911700-26911740)
chr3 (35-71)||(39980735-39980771)
chr3 (20-71)||(47132321-47132373)
chr3 (255-314)||(19983693-19983752)
chr3 (61-156)||(20880532-20880627)
chr3 (396-435)||(33405114-33405153)
chr3 (231-318)||(35959550-35959637)
chr3 (59-154)||(26911639-26911740)
chr3 (396-438)||(32582846-32582888)
chr3 (79-156)||(9832674-9832751)
chr3 (34-71)||(35696243-35696280)
chr3 (396-440)||(16072958-16073002)
chr3 (20-71)||(20880466-20880518)
chr3 (68-160)||(24684737-24684829)
chr3 (60-156)||(34610725-34610821)
chr3 (35-71)||(36631079-36631115)
chr3 (65-156)||(42799885-42799977)
chr3 (61-156)||(402461-402556)
chr3 (109-156)||(16072960-16073007)
chr3 (36-71)||(30443900-30443935)
chr3 (79-162)||(34637898-34637981)
chr3 (35-70)||(49092785-49092820)
chr3 (271-317)||(18405927-18405973)
chr3 (398-440)||(29114536-29114578)
chr3 (408-438)||(31615479-31615509)
chr3 (107-153)||(33405114-33405160)
chr3 (398-440)||(42747699-42747741)
chr3 (407-445)||(44014710-44014748)
chr3 (127-157)||(45083215-45083245)
chr3 (407-440)||(849824-849857)
chr3 (319-356)||(901930-901967)
chr3 (35-68)||(944560-944593)
chr3 (383-440)||(20170631-20170688)
chr3 (79-156)||(22203504-22203580)
chr3 (401-438)||(26990144-26990181)
chr3 (38-71)||(36189575-36189608)
chr3 (407-440)||(36769880-36769913)
chr3 (319-356)||(39980735-39980772)
chr3 (396-440)||(402459-402503)
chr3 (79-155)||(584120-584196)
chr3 (397-437)||(584156-584196)
chr3 (383-447)||(9832665-9832729)
chr3 (100-156)||(20170633-20170689)
chr3 (35-71)||(21367673-21367709)
chr3 (35-71)||(22203436-22203472)
chr3 (79-155)||(24085258-24085334)
chr3 (65-141)||(30443953-30444029)
chr3 (399-439)||(30657398-30657438)
chr3 (407-439)||(36507010-36507042)
chr3 (90-142)||(36783285-36783337)
chr3 (400-432)||(41848641-41848673)
chr3 (411-439)||(47903998-47904026)
chr3 (399-439)||(50946204-50946244)
chr3 (63-155)||(51929277-51929369)
[»] chr2 (66 HSPs)
chr2 (65-162)||(30331811-30331908)
chr2 (79-154)||(44590098-44590173)
chr2 (35-105)||(20933761-20933831)
chr2 (59-156)||(15305728-15305825)
chr2 (65-154)||(42419853-42419942)
chr2 (254-318)||(42868555-42868619)
chr2 (59-162)||(23974406-23974509)
chr2 (34-92)||(28206272-28206330)
chr2 (254-316)||(41241228-41241290)
chr2 (79-156)||(2416387-2416464)
chr2 (79-156)||(7928217-7928294)
chr2 (383-436)||(42419889-42419942)
chr2 (271-315)||(423790-423834)
chr2 (79-166)||(8017507-8017595)
chr2 (396-439)||(18179058-18179101)
chr2 (396-438)||(2416422-2416464)
chr2 (66-156)||(10619139-10619229)
chr2 (271-317)||(23974585-23974631)
chr2 (82-156)||(27317456-27317530)
chr2 (399-440)||(1830151-1830192)
chr2 (105-162)||(3312177-3312234)
chr2 (383-440)||(27317475-27317532)
chr2 (254-319)||(32592499-32592564)
chr2 (400-437)||(40059381-40059418)
chr2 (400-437)||(40085281-40085318)
chr2 (35-72)||(40279273-40279310)
chr2 (35-72)||(40279343-40279380)
chr2 (64-156)||(2142713-2142805)
chr2 (396-440)||(10619137-10619181)
chr2 (35-71)||(20952361-20952397)
chr2 (35-71)||(26202034-26202070)
chr2 (35-71)||(32592592-32592628)
chr2 (35-71)||(40279413-40279449)
chr2 (400-440)||(41170723-41170763)
chr2 (254-318)||(42659245-42659309)
chr2 (82-142)||(43036633-43036693)
chr2 (35-71)||(43279557-43279593)
chr2 (383-438)||(30331847-30331902)
chr2 (396-435)||(31561664-31561703)
chr2 (407-438)||(37419586-37419617)
chr2 (87-162)||(39073615-39073690)
chr2 (82-156)||(4607002-4607076)
chr2 (409-439)||(7103391-7103421)
chr2 (122-156)||(7103392-7103426)
chr2 (106-156)||(18179050-18179100)
chr2 (232-318)||(41407191-41407277)
chr2 (396-438)||(44600632-44600674)
chr2 (407-440)||(15370240-15370273)
chr2 (323-356)||(23956059-23956092)
chr2 (129-162)||(33197174-33197207)
chr2 (79-120)||(36534842-36534883)
chr2 (254-319)||(38010324-38010389)
chr2 (35-68)||(39659540-39659573)
chr2 (35-72)||(40279203-40279240)
chr2 (396-436)||(1633421-1633461)
chr2 (383-439)||(2142750-2142806)
chr2 (397-449)||(7928206-7928258)
chr2 (399-439)||(8017546-8017586)
chr2 (35-71)||(12289803-12289839)
chr2 (396-440)||(15305783-15305827)
chr2 (64-156)||(20952414-20952506)
chr2 (402-438)||(23974412-23974448)
chr2 (399-439)||(30990357-30990397)
chr2 (402-438)||(33197180-33197216)
chr2 (43-71)||(40835542-40835570)
chr2 (412-440)||(43910930-43910958)
[»] chr6 (36 HSPs)
chr6 (398-440)||(30536882-30536924)
chr6 (82-162)||(10645298-10645378)
chr6 (102-141)||(658463-658502)
chr6 (61-156)||(848045-848139)
chr6 (107-162)||(9911796-9911851)
chr6 (231-318)||(18076085-18076172)
chr6 (99-162)||(21405067-21405130)
chr6 (271-316)||(31623489-31623534)
chr6 (277-318)||(35070724-35070765)
chr6 (254-318)||(8147615-8147678)
chr6 (84-156)||(34404645-34404717)
chr6 (399-438)||(4308889-4308928)
chr6 (396-439)||(21405072-21405115)
chr6 (171-206)||(30641706-30641741)
chr6 (64-111)||(30926578-30926625)
chr6 (396-439)||(34404644-34404687)
chr6 (231-313)||(6538406-6538488)
chr6 (398-440)||(9604902-9604944)
chr6 (400-438)||(31594296-31594334)
chr6 (79-156)||(33089579-33089657)
chr6 (67-120)||(160918-160971)
chr6 (123-160)||(1498089-1498126)
chr6 (399-440)||(7785661-7785702)
chr6 (82-154)||(26559160-26559233)
chr6 (271-316)||(29660143-29660188)
chr6 (127-156)||(31811643-31811672)
chr6 (400-440)||(4325222-4325262)
chr6 (35-71)||(6536621-6536657)
chr6 (169-205)||(6538384-6538420)
chr6 (35-71)||(6538518-6538554)
chr6 (399-431)||(7351597-7351629)
chr6 (35-71)||(8201239-8201275)
chr6 (407-439)||(9202903-9202935)
chr6 (79-139)||(9559358-9559418)
chr6 (254-314)||(30926450-30926510)
chr6 (84-120)||(31813240-31813276)
[»] scaffold0147 (1 HSPs)
scaffold0147 (37-71)||(23639-23673)


Alignment Details
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 231 - 534
Target Start/End: Original strand, 32009879 - 32010192
Alignment:
Q  231 atttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaa-gataaaataattgtttttata 329  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  32009879 atttgcagcttatagtaagagctgttatcatgatatgcgattatgcataagcttacgtaagctatttttatagaaaaaagataaaataattgtttttata 32009978  T
Q  330 agctgtattgaagaacttatgaaaataggccnnnnnnngcttgtgttttcataa---------aacagtctgaagaaacttatgtgagtagataaactca 420  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  32009979 agctgtattgaagaacttatgaaaataggccaaaaaaagcttgtgttttcataagttctctcaaacagtctgaagaaacttatgtgagtagataaactca 32010078  T
Q  421 aataagtcaatccaaacagggccatagtggaattgactattaaatagtatcaattgtttcggtatcatattacttttctgtagagtttaatcttttgcgt 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32010079 aataagtcaatccaaacagggccatagtggaattgactattaaatagtatcaattgtttcggtatcatattacttttctgtagagtttaatcttttgcgt 32010178  T
Q  521 caattttgaatatt 534  Q
     | |||||||||||    
T  32010179 aatttttgaatatt 32010192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 62 - 230
Target Start/End: Original strand, 32009750 - 32009918
Alignment:
Q  62 ttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccc 161  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  32009750 ttatgaaaattgtcacaagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaacagatagactcaaatatgtcaatccaaacaaaccc 32009849  T
Q  162 tgtatatggcctatttcgataaatagcttatttgcagcttatagtaagagctgttatcatgatatgcga 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32009850 tgtatatggcctatttcgataaatagcttatttgcagcttatagtaagagctgttatcatgatatgcga 32009918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 9107150 - 9107240
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaac 155  Q
    |||||||||||   |||||||||||| |||| | ||||| | |||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  9107150 tgaaaattgtcctaagctgttttcatgagttctcccaaacattctcacaaaacttatgtcactagataaactcaaataagtcaatccaaac 9107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 32942625 - 32942745
Alignment:
Q  36 tgtttttataagctatattggagaacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaac 135  Q
    |||||| ||||||||| |||||||||||||||||| |||||  |||||| ||||||| || | ||||| ||||  |||||||||| |||| |||| || |    
T  32942625 tgttttcataagctatcttggagaacttatgaaaaatgtcataagctgtattcataaattctcccaaacagtcaaacaaaacttatgtcagtagaaaagc 32942724  T
Q  136 tcaaatatgtcaatccaaaca 156  Q
    ||  ||| |||||||||||||    
T  32942725 tcgtataagtcaatccaaaca 32942745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 10640009 - 10640104
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||| |||||  ||||||||||||||||| | ||||| | | |||||||||||| |||| |||||||||||||||| |  ||||||||||    
T  10640009 cttatgaaaaatgtcataagctgttttcataagttctcccaaacaatatcacaaaacttatgtcagtagataaactcaaataagctaatccaaaca 10640104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 16937897 - 16937802
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||| ||||||  ||||||||||||||||| ||||||| | |||||||||||||| |  | ||||||| |||||||| | |||||||||||    
T  16937897 cttatgaaatttgtcataagctgttttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaaataagccaatccaaaca 16937802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 42569004 - 42568942
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacagggccat 445  Q
    ||||||||| | ||||||||||| |||  ||||||||||||||||||||||||||||||||||    
T  42569004 aaacagtctcacgaaacttatgttagtgcataaactcaaataagtcaatccaaacagggccat 42568942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 32009681 - 32009733
Alignment:
Q  19 cttgtatatgc-atagattgtttttataagctatattggagaacttatgaaaa 70  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  32009681 cttgtatatgctataaattgtttttataagctatattggagaacttatgaaaa 32009733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 39594881 - 39594964
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    ||||||||||||||||| | ||||| | ||| |||||||||| |||  ||||||| |||||||| |||||||||||||| ||||    
T  39594881 agctgttttcataagttgtcccaaacaatctaacaaaacttatgtcggtagataagctcaaataagtcaatccaaacaagccct 39594964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 6096603 - 6096696
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaa 154  Q
    |||||||| | |||||| |||||||| | |||||| |||| || |||||||||||||||| | || |||||||  ||||||| |||||||||||    
T  6096603 cttatgaacaatgtcacaagctgtttacgtaagttcttcctaaaagtctcacaaaacttatgccagtagataagttcaaatacgtcaatccaaa 6096696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 12857348 - 12857251
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    ||||||||||||  || |||||||||||||| | |  || ||| |||||||||||| |||||||||||| ||||||||   |||||||||||| ||||    
T  12857348 tgaaaattgtcataagttgttttcataagttctccggaaaagtttcacaaaacttacgtcaatagataagctcaaataaaccaatccaaacaagccct 12857251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 10640062 - 10640114
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagggccatagt 448  Q
    |||||||||| ||||||||||||||||||||  |||||||||||| |||||||    
T  10640062 aaacttatgtcagtagataaactcaaataagctaatccaaacaggcccatagt 10640114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 41419393 - 41419473
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaac 159  Q
    ||||||||||| ||||| | ||||| | |||||||||| ||| |||| ||||| | |||||||| ||||||||||||||||    
T  41419393 agctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataagtcaatccaaacaaac 41419473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 41534512 - 41534592
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaac 159  Q
    ||||||||||| ||||| | ||||| | |||||||||| ||| |||| ||||| | |||||||| ||||||||||||||||    
T  41534512 agctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataagtcaatccaaacaaac 41534592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 35445840 - 35445777
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    |||||||||||||| || |  |||| |||||||||||||||| |||| ||||||||||||||||    
T  35445840 agctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaata 35445777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 119
Target Start/End: Complemental strand, 16457993 - 16457935
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaactt 119  Q
    |||||||||| |||||  ||||||||||||||||| | ||||| |||||||||||||||    
T  16457993 cttatgaaaactgtcataagctgttttcataagttctcccaaacagtctcacaaaactt 16457935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 440
Target Start/End: Complemental strand, 40335824 - 40335790
Alignment:
Q  406 gagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||||||||||||||||||||||||||||    
T  40335824 gagtagataaactcaaataagtcaatccaaacagg 40335790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 9107199 - 9107240
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaac 437  Q
    |||||||||| | |||||||||||||||||||||||||||||    
T  9107199 aaacttatgtcactagataaactcaaataagtcaatccaaac 9107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 12857715 - 12857618
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    ||||||||||||  || |||||||||||||| | |  || ||| |||||||||||| |||||||||| | ||||||||   |||||||||||| ||||    
T  12857715 tgaaaattgtcataagttgttttcataagttctccggaacagtttcacaaaacttacgtcaatagatgagctcaaataaaccaatccaaacaagccct 12857618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 439
Target Start/End: Original strand, 32197844 - 32197885
Alignment:
Q  398 acttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||| |||||||||||||||| ||||||||||||||||    
T  32197844 acttatgtcagtagataaactcaaaaaagtcaatccaaacag 32197885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 32941545 - 32941626
Alignment:
Q  81 ctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaa-ctcaaatatgtcaatccaaacaaaccc 161  Q
    ||||||||||||||| | |||||  |||||||| |||||| |||| |||||||| ||| |||| ||||||||||||| ||||    
T  32941545 ctgttttcataagttctcccaaacggtctcacagaacttatgtcagtagataaagctctaataagtcaatccaaacagaccc 32941626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 34736523 - 34736446
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||| |||| ||||| | |||||  ||||||||||||||| ||||  |||||| |||||||| |||||||||||||    
T  34736523 agctgtgttcaaaagttctcccaaactgtctcacaaaacttatgtcaccagataagctcaaataagtcaatccaaaca 34736446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 12857765 - 12857733
Alignment:
Q  39 ttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||||||||||||||||    
T  12857765 ttttataagctatattggagaacttatgaaaat 12857733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 13697916 - 13697852
Alignment:
Q  255 ttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataat 319  Q
    ||||||||||| | |||| ||||||| ||| | ||| |||||||||||| |||||||||||||||    
T  13697916 ttatcatgataagtgattttgcataaacttgcataaattatttttatagcaaaagataaaataat 13697852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 37954692 - 37954728
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||||||||||||| |||||||||    
T  37954692 ttgtttttataagctatattggagaacatatgaaaat 37954728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 3735648 - 3735585
Alignment:
Q  255 ttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||||| ||| ||||| |||||||||| |||| ||||| ||||| ||||||| ||||||    
T  3735648 ttatcatgataagcgcttatggataagcttacataagctatttctatagcaaaagatgaaataa 3735585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 7706008 - 7705917
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||| |||||  ||||||||||||||||| | ||||| ||  |||||||||||| |  | ||||||  |||||||| |||||||||||||    
T  7706008 tgaaaactgtcataagctgttttcataagttctcccaaagagcgtcacaaaacttatgctagtagatatgctcaaataagtcaatccaaaca 7705917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 439
Target Start/End: Original strand, 34198534 - 34198573
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  34198534 ttatgttagtaaataaactcaaataagtcaatccaaacag 34198573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 42582919 - 42582954
Alignment:
Q  36 tgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||| ||||||||||||||||||||||||||||    
T  42582919 tgtttttgtaagctatattggagaacttatgaaaat 42582954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 15015922 - 15015980
Alignment:
Q  84 ttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    |||||||||||| | ||||| ||||||||||| |||| |||| ||||||| ||||||||    
T  15015922 ttttcataagttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaata 15015980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 32010022 - 32010096
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||||| |  |||| ||||| |  ||||||| || | |||||||||||||||| |||||||||||||    
T  32010022 tgttttcataagttctctcaaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaaca 32010096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 39594916 - 39594958
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||||  |||||||| ||||||||||||||||||||||    
T  39594916 aaacttatgtcggtagataagctcaaataagtcaatccaaaca 39594958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 439
Target Start/End: Original strand, 40111382 - 40111420
Alignment:
Q  401 tatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  40111382 tatgtcagtagataaactcaaataagtcaatcgaaacag 40111420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Original strand, 32009696 - 32009733
Alignment:
Q  317 aattgtttttataagctgtattgaagaacttatgaaaa 354  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  32009696 aattgtttttataagctatattggagaacttatgaaaa 32009733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 32009967 - 32010004
Alignment:
Q  34 attgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  32009967 attgtttttataagctgtattgaagaacttatgaaaat 32010004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 71
Target Start/End: Complemental strand, 42500298 - 42500269
Alignment:
Q  42 tataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||||||||||||||||    
T  42500298 tataagctatattggagaacttatgaaaat 42500269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 7674724 - 7674796
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaa 154  Q
    ||||| |||||||| ||||||  |||||||||||||||| ||   ||||||| |||||||| | |||||||||    
T  7674724 tgtttccataagttcttccaagcagtctcacaaaacttaagtaggtagataagctcaaataagccaatccaaa 7674796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 7705959 - 7705915
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||  ||||||||  ||||||||||||||||||||||||    
T  7705959 aaacttatgctagtagatatgctcaaataagtcaatccaaacagg 7705915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 7985037 - 7985105
Alignment:
Q  73 gtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaat 141  Q
    ||||| |||||||||| |||| | | ||||||||||||||||| |||| | || ||||||| |||||||    
T  7985037 gtcacaagctgttttcttaagctctcccaaatagtctcacaaagcttatgccagtagataatctcaaat 7985105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 439
Target Start/End: Original strand, 14331486 - 14331518
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||||| |||||||||||||||||||||||    
T  14331486 agtagataagctcaaataagtcaatccaaacag 14331518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 16458140 - 16458072
Alignment:
Q  250 agctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||||| ||||| | | ||||  |||||||| | |||| ||||||||||| ||||||||||||||    
T  16458140 agctcttatcctgataagtgcttatatataagcttgcataagctatttttatagcaaaagataaaataa 16458072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 16937844 - 16937800
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||    
T  16937844 aaacttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 16937947 - 16937911
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  16937947 ttgtttttatacgctatattggagaacttaggaaaat 16937911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 17369316 - 17369356
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||| |||||||||  |||||||||||||||||||||||    
T  17369316 ttatgtcagtagataagttcaaataagtcaatccaaacagg 17369356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 24030465 - 24030429
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||| || |||||||||||||    
T  24030465 ttgtttttataagctatattagataacttatgaaaat 24030429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 25461711 - 25461675
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  25461711 ttgtttttataagctctattggagaacttattaaaat 25461675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 29925855 - 29925883
Alignment:
Q  43 ataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||||||||||||    
T  29925855 ataagctatattggagaacttatgaaaat 29925883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 442
Target Start/End: Complemental strand, 34417877 - 34417841
Alignment:
Q  406 gagtagataaactcaaataagtcaatccaaacagggc 442  Q
    |||||||||||||||||||| | ||||||||||||||    
T  34417877 gagtagataaactcaaataaattaatccaaacagggc 34417841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 35299872 - 35299916
Alignment:
Q  112 caaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||| | |||||||||||| |||||||| |||||||||||||    
T  35299872 caaaactcatgtcaatagataagctcaaataagtcaatccaaaca 35299916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 35299874 - 35299918
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||| |||| | ||||||| ||||||||||||||||||||||||    
T  35299874 aaactcatgtcaatagataagctcaaataagtcaatccaaacagg 35299918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 37954580 - 37954616
Alignment:
Q  169 ggcctatttcgataaatagcttatttgcagcttatag 205  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  37954580 ggcctgtttggataaatagcttatttgcagcttatag 37954616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 437
Target Start/End: Original strand, 39105587 - 39105615
Alignment:
Q  409 tagataaactcaaataagtcaatccaaac 437  Q
    |||||||||||||||||||||||||||||    
T  39105587 tagataaactcaaataagtcaatccaaac 39105615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 43300884 - 43300920
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||| |||||||| |||||||||||||||||||    
T  43300884 ttgtttttgtaagctatcttggagaacttatgaaaat 43300920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 37617479 - 37617384
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||| ||||||  |||||||||||||| || |  |||| |||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  37617479 cttatgaaatttgtcaaaagctgttttcataaattctcgcaaacagtctcacaaaacttacggcaatagataaactcaaataagtcaatccaaaca 37617384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 2295152 - 2295247
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||||  ||||||||||||||||| | ||||| |||||||||||||||| | || ||||||| |||||||| | |||| ||||||    
T  2295152 cttatgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaataagccaattcaaaca 2295247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 3234031 - 3233934
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||| ||| |  || |||||||||||||| | || || |||||||||||||||| | || ||||||| |||||||| |||||||||||||    
T  3234031 aacttatgaaaactgttataagttgttttcataagttctccctaacagtctcacaaaacttacggcactagataagctcaaataagtcaatccaaaca 3233934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 7244628 - 7244576
Alignment:
Q  101 aaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaa 153  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  7244628 aaatagtctcacaaaacttatatcaatagataaactcaaataggtcaatccaa 7244576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 38001669 - 38001732
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    ||||||||||||||||| | ||||| |||||||||||||||| |||| | ||||||||||||||    
T  38001669 agctgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaaata 38001732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 50644248 - 50644173
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaa 157  Q
    |||||||||||||| | ||||| ||||||||||||| || || | ||||||| |||||||| ||||||||||||||    
T  50644248 tgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataagtcaatccaaacaa 50644173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 49938807 - 49938892
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatc 150  Q
    ||||||||||||  ||||||||||||||||| | ||||| | |||||||||||||| | ||  | ||||||||||||| |||||||    
T  49938807 tgaaaattgtcataagctgttttcataagttctcccaaacaatctcacaaaacttatgccacgatataaactcaaataagtcaatc 49938892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 2295266 - 2295342
Alignment:
Q  81 ctgttttcataagtttttcc-aaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||| |||||||| ||| ||||||||||| |||||||| |||| ||||||| |||||||| | |||||||||||    
T  2295266 ctgttttaataagtttctcccaaatagtctcagaaaacttaagtcagtagataagctcaaataagccaatccaaaca 2295342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 3234079 - 3234043
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||||||||||||||||||||    
T  3234079 ttgtttttataagctatattggagaacttatgaaaat 3234043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 155
Target Start/End: Original strand, 24334257 - 24334345
Alignment:
Q  67 aaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaac 155  Q
    ||||||||||   |||||||| |||| || |  ||||||||||||||||||||| |||  | |||||||||||||| ||||||||||||    
T  24334257 aaaattgtcattggctgtttttataaattctctcaaatagtctcacaaaacttatgtccgttgataaactcaaataagtcaatccaaac 24334345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 27146269 - 27146173
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaa 157  Q
    |||||||| | |||||  || ||||| | |||||| ||||||  |||||||||||||||| | |||||||||| |||||||  ||||||||||||||    
T  27146269 cttatgaacaatgtcataagttgtttccttaagttcttccaacaagtctcacaaaacttatgccaatagataagctcaaatcagtcaatccaaacaa 27146173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 33835652 - 33835605
Alignment:
Q  270 attatgcataagcttacgtaagttatttttatagaaaaagataaaata 317  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||||    
T  33835652 attatgcataaggttacataagttatttttatagaagaagataaaata 33835605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 33914206 - 33914159
Alignment:
Q  270 attatgcataagcttacgtaagttatttttatagaaaaagataaaata 317  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||||    
T  33914206 attatgcataaggttacataagttatttttatagaagaagataaaata 33914159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 7069490 - 7069568
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaa 157  Q
    ||||||||| ||||||| ||||||||||||| |||||||| |  | | ||||||| |||||||||| | ||||||||||    
T  7069490 agctgttttgataagttcttccaaatagtcttacaaaactaattttagtagataagctcaaatatggccatccaaacaa 7069568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 3887646 - 3887545
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaacc 160  Q
    |||||||| | |||||  || |||||||||||||| ||||||| || || ||||||||||   ||||||  || |||||||| ||||||||||||| |||    
T  3887646 cttatgaacaatgtcataagatgttttcataagttcttccaaacagccttacaaaacttataccaatagtaaagctcaaataagtcaatccaaacagacc 3887547  T
Q  161 ct 162  Q
    ||    
T  3887546 ct 3887545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 7941680 - 7941757
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||||| || ||||||| |||||||||||||| | || |  |||||||||||||||   |||||||||||    
T  7941680 agctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 7941757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 33204382 - 33204313
Alignment:
Q  87 tcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||| | ||||| |||||||||||||||| |||| ||||||| |||||||| ||| ||| |||||    
T  33204382 tcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctcaaataagtcgatctaaaca 33204313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 15609074 - 15609114
Alignment:
Q  30 atagattgtttttataagctatattggagaacttatgaaaa 70  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  15609074 ataggttgtctttataagctatattggagaacttatgaaaa 15609114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 17603448 - 17603412
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17603448 ttgtttttataagctatattggagaacttctgaaaat 17603412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 28287890 - 28287950
Alignment:
Q  96 tttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||||||||||| |||| | ||||| |||||||| |||| | |||||||||||    
T  28287890 tttccaaatagtctcacaaagcttatgccaatatataaactctaataagccaatccaaaca 28287950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 439
Target Start/End: Complemental strand, 30014029 - 30013997
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||||||||||||||||||||||||||||    
T  30014029 agtagataaactcaaataagtcaatccaaacag 30013997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 318
Target Start/End: Complemental strand, 30582090 - 30582042
Alignment:
Q  271 ttatgcataa-gcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  30582090 ttatgcataaagcttacataaggtatttttatagaaaaagataaaataa 30582042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 42174861 - 42174897
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||| |||||||||||||||||||||||    
T  42174861 ttgtttttataagttatattggagaacttatgaaaat 42174897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 49938753 - 49938789
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||| ||||||||||||||||    
T  49938753 ttgtttttataagctatattagagaacttatgaaaat 49938789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 438
Target Start/End: Complemental strand, 172523 - 172492
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||||||||||||||||||||||||||    
T  172523 agtagataaactcaaataagtcaatccaaaca 172492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 2295016 - 2295071
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaag 309  Q
    |||||||||||| | | |||||||||||||||| |||| ||||| |||||||||||    
T  2295016 cttatcatgataagtgcttatgcataagcttacataagctatttctatagaaaaag 2295071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 445
Target Start/End: Complemental strand, 5894142 - 5894103
Alignment:
Q  406 gagtagataaactcaaataagtcaatccaaacagggccat 445  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  5894142 gagtagataaactcaaataagtcaatccaagcaggcccat 5894103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 5894218 - 5894159
Alignment:
Q  36 tgtttttataagctatattggagaacttatgaaaattgtcacgagctgttttcataagtt 95  Q
    ||||||| |||||||| |||||||||||||||| | || ||  |||||||||||||||||    
T  5894218 tgtttttgtaagctatcttggagaacttatgaacaatgacataagctgttttcataagtt 5894159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 6292604 - 6292643
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  6292604 cttatgtcagtagataagctcaaataagtcaatccaaaca 6292643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 14576664 - 14576573
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||  ||||||||||| ||||| | ||||| |||  ||||||| ||| | || ||||||| |||||||| | |||||||||||    
T  14576664 tgaaaattgtcataagctgttttcacaagttgtcccaaacagtgccacaaaatttaagccagtagataagctcaaataagccaatccaaaca 14576573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 438
Target Start/End: Complemental strand, 29045883 - 29045852
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||||||||||||||||||||||||||    
T  29045883 agtagataaactcaaataagtcaatccaaaca 29045852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 34795488 - 34795453
Alignment:
Q  36 tgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||| ||||||||||||||||||||||||||    
T  34795488 tgtttttattagctatattggagaacttatgaaaat 34795453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 37631622 - 37631587
Alignment:
Q  36 tgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37631622 tgtttttgtaagctatattggagaacttatgaaaat 37631587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 39976201 - 39976130
Alignment:
Q  84 ttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaac 155  Q
    |||||||||||| |  |||| ||| |||||||||||| |||| ||||||| |||||||| |||| |||||||    
T  39976201 ttttcataagttctctcaaacagtttcacaaaacttatgtcagtagataatctcaaataagtcagtccaaac 39976130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 437
Target Start/End: Complemental strand, 44115864 - 44115825
Alignment:
Q  398 acttatgtgagtagataaactcaaataagtcaatccaaac 437  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  44115864 acttaagtgagtaggtaaactcaaataagtcaatccaaac 44115825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 318
Target Start/End: Original strand, 47432033 - 47432072
Alignment:
Q  279 aagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  47432033 aagcttacataagctatttttatagaaaaagataaaataa 47432072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 50644229 - 50644174
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||| |  |||| ||||| ||||||||| ||||||||||||||||||||||    
T  50644229 aaacagtctcacaaaacatatgttagtagataagctcaaataagtcaatccaaaca 50644174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 1432594 - 1432664
Alignment:
Q  84 ttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaa 154  Q
    |||||||||||| ||||||| |||||||||||| ||| |||  | ||||| |||||||| | |||||||||    
T  1432594 ttttcataagttcttccaaacagtctcacaaaatttatgtcggtggataagctcaaataagccaatccaaa 1432664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 6557032 - 6557114
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtca 147  Q
    |||||| |||||  |||| |||||||||||| |  ||||||||||||||||||||| || | |||||||  ||||||| ||||    
T  6557032 tgaaaactgtcataagctattttcataagttctctcaaatagtctcacaaaacttatgttagtagataagttcaaataagtca 6557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 23445444 - 23445482
Alignment:
Q  398 acttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  23445444 acttatgagtgtagataaactcaaataagtcaatccaaa 23445482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 37631717 - 37631655
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaat 316  Q
    ||||| |||||| ||| |||| ||||||||||| |||| ||| |||||||| |||||||||||    
T  37631717 cttattatgataagcgcttatacataagcttacataagctatctttatagagaaagataaaat 37631655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 356
Target Start/End: Complemental strand, 3234079 - 3234042
Alignment:
Q  319 ttgtttttataagctgtattgaagaacttatgaaaata 356  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  3234079 ttgtttttataagctatattggagaacttatgaaaata 3234042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 5709570 - 5709611
Alignment:
Q  30 atagattgtttttataagctatattggagaacttatgaaaat 71  Q
    |||| ||||||||| |||| ||||||||||||||||||||||    
T  5709570 ataggttgtttttagaagcaatattggagaacttatgaaaat 5709611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 5741615 - 5741648
Alignment:
Q  38 tttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||| ||||||||||||||||    
T  5741615 tttttataagctatattagagaacttatgaaaat 5741648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 7862007 - 7862052
Alignment:
Q  271 ttatgcataagcttacgtaagttatttttatagaaaaagataaaat 316  Q
    ||||||||||||||   |||| ||||||||||||||||||||||||    
T  7862007 ttatgcataagctttgataagctatttttatagaaaaagataaaat 7862052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Complemental strand, 10199366 - 10199325
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||    
T  10199366 cttatgttagtagataagctcaaataagtcaatccaaccagg 10199325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 13810052 - 13810145
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatcca 152  Q
    ||||| ||||||||||||  | |||| |||||||||| |   ||| |||||||||||||||| |||| ||||||| | |||||| | |||||||    
T  13810052 aacttttgaaaattgtcataaactgtattcataagttctctaaaagagtctcacaaaacttacgtcagtagataagcacaaataagccaatcca 13810145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 17603397 - 17603320
Alignment:
Q  62 ttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaa 139  Q
    |||||||||||||||  |||||||||| |||||| | || |||||||||  |||||||| |   ||||||||||||||    
T  17603397 ttatgaaaattgtcataagctgttttcgtaagttctccctaatagtctcgtaaaacttacgcttatagataaactcaa 17603320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 24334304 - 24334345
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaac 437  Q
    ||||||||||  || |||||||||||||||||||||||||||    
T  24334304 aaacttatgtccgttgataaactcaaataagtcaatccaaac 24334345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 30192027 - 30192076
Alignment:
Q  89 ataagtttttccaaatagtctcacaaaacttaggtcaatagataaactca 138  Q
    ||||||| | ||||| ||||||| |||||||| |||||||||||||||||    
T  30192027 ataagttctcccaaagagtctcataaaacttatgtcaatagataaactca 30192076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 33186384 - 33186457
Alignment:
Q  83 gttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||| | | | | |||||||||||||||| | |||  |||||||||||||| | |||||||||||    
T  33186384 gttttcataagttctcctagacagtctcacaaaacttatgccaacggataaactcaaataagccaatccaaaca 33186457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 438
Target Start/End: Complemental strand, 37617413 - 37617384
Alignment:
Q  409 tagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||||||||||||||||||||||||    
T  37617413 tagataaactcaaataagtcaatccaaaca 37617384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 437
Target Start/End: Complemental strand, 39976171 - 39976130
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaac 437  Q
    |||||||||| ||||||||| ||||||||||||| |||||||    
T  39976171 aaacttatgtcagtagataatctcaaataagtcagtccaaac 39976130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 438
Target Start/End: Original strand, 41505784 - 41505825
Alignment:
Q  397 aacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||| ||||||||| |||||||||| |||||||||||    
T  41505784 aacttatgtcagtagataagctcaaataagccaatccaaaca 41505825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 473170 - 473206
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||| | |||||||||||||||||||||    
T  473170 ttgtttttataagttctattggagaacttatgaaaat 473206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 489267 - 489339
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaa 154  Q
    |||||||||||||||||| ||| ||||| |||||| ||| || | ||||||| || ||||| |||||| ||||    
T  489267 tgttttcataagtttttctaaacagtcttacaaaaattatgttagtagataatctgaaataagtcaatacaaa 489339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 1510374 - 1510338
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  1510374 ttgtttttataagctctattggagaacttacgaaaat 1510338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 2295300 - 2295344
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||| || ||||||||| |||||||||| |||||||||||||    
T  2295300 aaacttaagtcagtagataagctcaaataagccaatccaaacagg 2295344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 435
Target Start/End: Original strand, 2522716 - 2522744
Alignment:
Q  407 agtagataaactcaaataagtcaatccaa 435  Q
    |||||||||||||||||||||||||||||    
T  2522716 agtagataaactcaaataagtcaatccaa 2522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 13809988 - 13810040
Alignment:
Q  20 ttgtatatgc-atagattgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||| ||| ||||||||||||| ||||||| |||||||| |||||||    
T  13809988 ttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaat 13810040  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 15784413 - 15784465
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaa 435  Q
    ||||||||| |  |||||||||| ||||||||| |||||||||||| ||||||    
T  15784413 aaacagtcttacaaaacttatgttagtagataagctcaaataagtcgatccaa 15784465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 17009539 - 17009503
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  17009539 ttatgtcagtagataaactcaaataagtcaattcaaa 17009503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 17631057 - 17631025
Alignment:
Q  122 gtcaatagataaactcaaatatgtcaatccaaa 154  Q
    ||||||||||||||||||| |||||||||||||    
T  17631057 gtcaatagataaactcaaacatgtcaatccaaa 17631025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 24417711 - 24417655
Alignment:
Q  100 caaatagtctcacaaa-acttaggtcaatagataaactcaaatatgtcaatccaaac 155  Q
    |||||||||||||||  |||||  | |||||||||||||||||| ||||||||||||    
T  24417711 caaatagtctcacaagtacttatattaatagataaactcaaataagtcaatccaaac 24417655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 437
Target Start/End: Complemental strand, 24417683 - 24417655
Alignment:
Q  409 tagataaactcaaataagtcaatccaaac 437  Q
    |||||||||||||||||||||||||||||    
T  24417683 tagataaactcaaataagtcaatccaaac 24417655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 26184856 - 26184896
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||| | |||| |||||||||||||||||||||||||||    
T  26184856 ttatgtcaatagaaaaactcaaataagtcaatccaaacagg 26184896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 30257797 - 30257833
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  30257797 ttatgtcagtagataaactcaaataagtaaatccaaa 30257833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 33204368 - 33204312
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||||| |  |||||||||| ||||||||| |||||||||||| ||| ||||||    
T  33204368 aaacagtctcacaaaacttatgtcagtagataagctcaaataagtcgatctaaacag 33204312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 34795564 - 34795520
Alignment:
Q  273 atgcataagcttacgtaagttatttttatagaaaaagataaaata 317  Q
    |||||||||||||  |||| ||||||||| |||||||||||||||    
T  34795564 atgcataagcttagataagctatttttattgaaaaagataaaata 34795520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 36872738 - 36872774
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  36872738 ttgtttttacaagctatattgcagaacttatgaaaat 36872774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 37473288 - 37473372
Alignment:
Q  231 atttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaa 315  Q
    ||||||||||||| | |  || ||||||||||| | ||  ||||| |||||||||| |||| ||||||||||| ||| |||||||    
T  37473288 atttgcagcttattgcacaagttcttatcatgacaagcacttatgtataagcttacataagctatttttatagcaaatgataaaa 37473372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 38116046 - 38116002
Alignment:
Q  106 gtctcacaaaacttaggtcaatagataaactcaaatatgtcaatc 150  Q
    ||||||||||||||| |||| ||||||| |||||||| |||||||    
T  38116046 gtctcacaaaacttacgtcagtagataagctcaaataagtcaatc 38116002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 19302576 - 19302482
Alignment:
Q  62 ttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||||||  |||||||||||||| || | ||||||| |||||||||||||| |||| ||||||| |||||||| |||||| ||||||    
T  19302576 ttatgaaaattgtcataagctgttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaataagtcaattcaaaca 19302482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 27288001 - 27288060
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaact 118  Q
    |||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||||||    
T  27288001 aacttatgaaaattgttataagctgttttcataagttcttccaaatagtctcacaaaact 27288060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 256 - 315
Target Start/End: Original strand, 46078061 - 46078120
Alignment:
Q  256 tatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaa 315  Q
    |||||||||| ||| ||||| |||||||||| ||||||||||||||||||||||||||||    
T  46078061 tatcatgataagcgcttatgtataagcttacataagttatttttatagaaaaagataaaa 46078120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 20526522 - 20526603
Alignment:
Q  81 ctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    ||||||||||||||| |  |||| |||||||||||| ||    ||||||||||||||||||| |||||||||||||||||||    
T  20526522 ctgttttcataagttctctcaaacagtctcacaaaatttctaccaatagataaactcaaataagtcaatccaaacaaaccct 20526603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 33128669 - 33128733
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||||||| | | |||||||||||||||| || |||||||||||||||| |||||||||||    
T  33128669 cttatcatgataagtgcttatgcataagcttacttacgttatttttatagaaagagataaaataa 33128733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 4970802 - 4970711
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||| ||  || |||||||||||||| | ||||| |||||||||| ||||| ||||  |||||| |||||||| |||||||||||||    
T  4970802 tgaaaattgccataagttgttttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaataagtcaatccaaaca 4970711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 22940072 - 22940013
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaact 118  Q
    |||||||||||||||| |  || |||||||||||||| ||||||||||||||||||||||    
T  22940072 aacttatgaaaattgttataagttgttttcataagttcttccaaatagtctcacaaaact 22940013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 34464231 - 34464141
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaac 155  Q
    ||||||||||||  ||||||||||||||||  | ||||| |||||   |||| ||| |||||||||||||||||||||  |||||||||||    
T  34464231 tgaaaattgtcataagctgttttcataagtcctcccaaaaagtcttgtaaaatttatgtcaatagataaactcaaataaatcaatccaaac 34464141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 5947299 - 5947392
Alignment:
Q  63 tatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||| |||||  ||||| ||||| ||||| ||||||| ||||||| ||||||||   |||||||||| |||||||| | |||||||||||    
T  5947299 tatgaaaaatgtcataagctggtttcaaaagttcttccaaacagtctcataaaacttataccaatagataagctcaaataagccaatccaaaca 5947392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 21568565 - 21568528
Alignment:
Q  29 catagattgtttttataagctatattggagaacttatg 66  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21568565 catagattgtttttataagctatattggagaacttatg 21568528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 33601424 - 33601343
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    |||||||||| |||||  ||||||||||||||||| |   ||| |||||||||||||||| | |||||||||| ||||||||    
T  33601424 cttatgaaaagtgtcataagctgttttcataagttctcgaaaagagtctcacaaaacttatgccaatagataagctcaaata 33601343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 34035971 - 34036068
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||| | |||||  || | |||||||||||| |||||| ||||||||||| || || |||| ||||||| |||||||| |||||| ||||||    
T  34035971 aacttatgaacaatgtcataagttattttcataagttcttccaagtagtctcacaatacatatgtcagtagataagctcaaataagtcaattcaaaca 34036068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 441
Target Start/End: Original strand, 44822067 - 44822112
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacaggg 441  Q
    |||||||||| || ||||||||||||||||||||||||||||||||    
T  44822067 aaacttatgtcagcagataaactcaaataagtcaatccaaacaggg 44822112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 19022649 - 19022613
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||||||||||||||||||||    
T  19022649 ttgtttttataagctatattggagaacttatgaaaat 19022613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 33266479 - 33266399
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    ||||||| ||| || | ||||||||| |||||||||||| |||  ||||||| |||||||| ||||||||||||| |||||    
T  33266479 tgttttcgtaaattctcccaaatagtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacataccct 33266399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 4970969 - 4970882
Alignment:
Q  231 atttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||||||||| || ||  | || ||||||| ||| ||||| |||||||||| |||| ||||| ||||| ||||||||||||||    
T  4970969 atttgcagcttatagaaaaagtccctaccatgataagcggttatgtataagcttacataagctatttctatagcaaaagataaaataa 4970882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 18765366 - 18765421
Alignment:
Q  87 tcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    ||||||||| | ||||| |||||||||||||||| |||||||||||| ||||||||    
T  18765366 tcataagttctcccaaacagtctcacaaaacttatgtcaatagataagctcaaata 18765421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 46280335 - 46280300
Alignment:
Q  36 tgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||||||||||||||||||||||    
T  46280335 tgtttttataagctatattggagaacttatgaaaat 46280300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 48470100 - 48470195
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||| || ||  ||||||||||||||||| | ||||| | ||||| |||||||| ||| |||||||| |||||||| | |||||| ||||    
T  48470100 cttatgaaaaatgccataagctgttttcataagttctcccaaacaatctcataaaacttatgtctatagataagctcaaataagccaatcctaaca 48470195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 11783013 - 11782956
Alignment:
Q  105 agtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    |||||||| |||||||  ||| ||||||| |||||||| |||||||||||||||||||    
T  11783013 agtctcactaaacttacatcagtagataatctcaaataagtcaatccaaacaaaccct 11782956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 19624289 - 19624334
Alignment:
Q  117 cttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||||    
T  19624289 cttatgtcaatagataaactcaaataagtcaagccaaacaaaccct 19624334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 27863735 - 27863658
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    |||||||| || | ||||||||||||||||| |  ||||||||||||||||||||| | || | ||||| ||||||||    
T  27863735 tgaaaattttctcaagctgttttcataagttctctcaaatagtctcacaaaacttatgccagtggataagctcaaata 27863658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 44822060 - 44822109
Alignment:
Q  107 tctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||||| ||||  ||||||||||||||| |||||||||||||    
T  44822060 tctcacaaaacttatgtcagcagataaactcaaataagtcaatccaaaca 44822109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 19302524 - 19302480
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||    
T  19302524 aaacttatgtcagtagataagctcaaataagtcaattcaaacagg 19302480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 28691794 - 28691754
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  28691794 cttatgttagcagataaactcaaataagtcaatccaaacag 28691754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 30812251 - 30812291
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  30812251 ttatgtcagtaggtaaactcaaataagtcaatccaaacagg 30812291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 45593584 - 45593680
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaat-agataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||| |||||  || |||||| ||||||| | ||||| ||||||||||| |||| |||| | | ||||||||||||| | |||||||||||    
T  45593584 cttatgaaaaatgtcatcagatgtttttataagttctcccaaacagtctcacaaagcttatgtcagtaatataaactcaaataagccaatccaaaca 45593680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 48140259 - 48140335
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactc 137  Q
    ||||| |||||||| || |||||||||||||  || | ||||| ||||||||| |||||| | ||||||||||||||    
T  48140259 cttataaaaattgttacaagctgttttcatacattctcccaaacagtctcacataacttatgccaatagataaactc 48140335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 21568509 - 21568454
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaa 116  Q
    |||||||||||||| |  ||||||||||||||||| | ||||| ||||||||||||    
T  21568509 cttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaaaa 21568454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 46280335 - 46280296
Alignment:
Q  320 tgtttttataagctgtattgaagaacttatgaaaataggc 359  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  46280335 tgtttttataagctatattggagaacttatgaaaataggc 46280296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 19022601 - 19022527
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataa 133  Q
    ||||||||||||||||||  || ||||||||||| || | ||||| | |||||||||||| | |||| |||||||    
T  19022601 aacttatgaaaattgtcataagttgttttcataaattctcccaaacaatctcacaaaactcatgtcagtagataa 19022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 19214419 - 19214361
Alignment:
Q  62 ttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaactta 120  Q
    |||||||||||||||   |||||||||||||||| | ||||| | ||||||||||||||    
T  19214419 ttatgaaaattgtcatttgctgttttcataagttctcccaaacaatctcacaaaactta 19214361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 438
Target Start/End: Complemental strand, 33266447 - 33266405
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||||  |||||||| ||||||||||||||||||||||    
T  33266447 aaacttatgtcggtagataagctcaaataagtcaatccaaaca 33266405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 33287919 - 33287973
Alignment:
Q  84 ttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactca 138  Q
    ||||||||| || | |||||||||||||||||||||||||||  |||||| ||||    
T  33287919 ttttcataaattctcccaaatagtctcacaaaacttaggtcataagataagctca 33287973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 33602041 - 33601963
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaa 139  Q
    |||||||||| |||||  |||||||||||||||||||   ||| ||||||| |||||||| | || ||||||| |||||    
T  33602041 cttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 33601963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 44989670 - 44989632
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaactta 120  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  44989670 tgttttcataagttttcccaaacagtctcacaaaactta 44989632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 45806657 - 45806571
Alignment:
Q  232 tttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||||||||| || ||| |||||||| ||| ||  ||||| |||||||| | |||| ||| ||||||| |||||| |||||||    
T  45806657 tttgcagcttatagcaaaagcacttatcataataagcacttatgtataagcttgcataagctatgtttatagcaaaagagaaaataa 45806571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 443
Target Start/End: Original strand, 992188 - 992233
Alignment:
Q  398 acttatgtgagtagataaactcaaataagtcaatccaaacagggcc 443  Q
    |||||||| |||||||||| ||||||||| ||||||||||| ||||    
T  992188 acttatgttagtagataaaatcaaataagccaatccaaacaaggcc 992233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 9210917 - 9210970
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    ||||||||| |  |||||||| | ||||||||| ||||||||||||||||||||    
T  9210917 aaacagtctcagaaaacttatatcagtagataagctcaaataagtcaatccaaa 9210970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 356
Target Start/End: Complemental strand, 19022649 - 19022612
Alignment:
Q  319 ttgtttttataagctgtattgaagaacttatgaaaata 356  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  19022649 ttgtttttataagctatattggagaacttatgaaaata 19022612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 438
Target Start/End: Original strand, 20526568 - 20526597
Alignment:
Q  409 tagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||||||||||||||||||||||||    
T  20526568 tagataaactcaaataagtcaatccaaaca 20526597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 45338549 - 45338602
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    ||||||||| || |||||||||  ||| |||||||||||||||| |||||||||    
T  45338549 aaacagtctcaaaaaacttatgctagtggataaactcaaataagccaatccaaa 45338602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 436
Target Start/End: Original strand, 7612551 - 7612579
Alignment:
Q  408 gtagataaactcaaataagtcaatccaaa 436  Q
    |||||||||||||||||||||||||||||    
T  7612551 gtagataaactcaaataagtcaatccaaa 7612579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 19214470 - 19214434
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||| |||||||||||||| |||||||||||||||    
T  19214470 ttgtttgtataagctatattgtagaacttatgaaaat 19214434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 21568808 - 21568728
Alignment:
Q  232 tttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagata 312  Q
    |||||||||||||| |  ||  |||||||||||| ||  ||||| |||||||| | |||| ||||||||||| ||||||||    
T  21568808 tttgcagcttatagcataagtgcttatcatgataagcacttatgtataagcttgcataagctatttttatagcaaaagata 21568728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 24048651 - 24048691
Alignment:
Q  398 acttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    |||||||| ||||||||||||||||||||| ||| ||||||    
T  24048651 acttatgtcagtagataaactcaaataagtaaattcaaaca 24048691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 25670580 - 25670512
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaa-aacttaggtcaatagataaactcaaatatgtcaat 149  Q
    ||||||||||||||||  |||| |||||||||| | |||| |||||||||||| ||||| || ||||||    
T  25670580 tgttttcataagttttctcaaacagtctcacaagagcttatgtcaatagataagctcaagtaagtcaat 25670512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 33645913 - 33645873
Alignment:
Q  122 gtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    |||||||||||||||||||| || |||| ||||||||||||    
T  33645913 gtcaatagataaactcaaatctgccaatacaaacaaaccct 33645873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 34744034 - 34744070
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  34744034 ttgttttcataagctatattggagaacttataaaaat 34744070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 34744088 - 34744164
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaat 141  Q
    ||||||||||||  || | ||||||| |||| ||||||| ||||||||||| |||| || | ||||||| |||||||    
T  34744088 tgaaaattgtcataagttcttttcattagttcttccaaacagtctcacaaatcttatgttagtagataagctcaaat 34744164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 39551505 - 39551469
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    |||||| |||||| |||||||||||||||||||||||    
T  39551505 ttatgtaagtagaaaaactcaaataagtcaatccaaa 39551469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 40377916 - 40377880
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  40377916 ttgttttcataacctatattggagaacttatgaaaat 40377880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 43694633 - 43694597
Alignment:
Q  320 tgtttttataagctgtattgaagaacttatgaaaata 356  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  43694633 tgtttttataagctatatcgaagaacttatgaaaata 43694597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 438
Target Start/End: Complemental strand, 44917473 - 44917445
Alignment:
Q  410 agataaactcaaataagtcaatccaaaca 438  Q
    |||||||||||||||||||||||||||||    
T  44917473 agataaactcaaataagtcaatccaaaca 44917445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 45790489 - 45790453
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||| |||||||||| |||||||||||||    
T  45790489 ttgtttttataaactatattggataacttatgaaaat 45790453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 440
Target Start/End: Complemental strand, 47134703 - 47134675
Alignment:
Q  412 ataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||||||||||||||||||||||    
T  47134703 ataaactcaaataagtcaatccaaacagg 47134675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 43717928 - 43717855
Alignment:
Q  81 ctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaa 154  Q
    ||||||||||||||| | |||||||||||||||||||||| |||||||||||| |||||||| | |||||||||    
T  43717928 ctgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaataagccaatccaaa 43717855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 38648407 - 38648502
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||| || ||||| |||||||||||||||| | | ||||| |||||||||||||||| |||| ||||||| || ||||| | |||||| ||||    
T  38648407 cttatgagaactgtcatgagctgttttcataaggtctcccaaacagtctcacaaaacttatgtcagtagataatcttaaataagccaatcctaaca 38648502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 446
Target Start/End: Original strand, 38602436 - 38602486
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagggccata 446  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  38602436 aaacttatgtcagtagataagctcaaataagtcaatccaaacaggcccata 38602486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 30251428 - 30251371
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||||| | ||||||||||| ||||||||| |||||||||| |||||||||||||    
T  30251428 aaacagtctcacgaaacttatgtcagtagataagctcaaataagccaatccaaacagg 30251371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 30251450 - 30251373
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||| |||||| | ||||| |||||||| ||||||| |||| ||||||| |||||||| | |||||||||||    
T  30251450 agctgttttcgtaagttctcccaaacagtctcacgaaacttatgtcagtagataagctcaaataagccaatccaaaca 30251373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 32213171 - 32213220
Alignment:
Q  43 ataagctatattggagaacttatgaaaattgtcacgagctgttttcataa 92  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  32213171 ataagctatattggaaaacttatgaaaattgtcataagctgttttcataa 32213220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 922415 - 922319
Alignment:
Q  67 aaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtc-aatccaaacaaaccct 162  Q
    |||| ||||| |||||||||  |||| || | ||||| ||| ||||||||||||||||| || ||||||||||||| ||| |||||||||| |||||    
T  922415 aaaaatgtcatgagctgtttctataaattatcccaaacagtatcacaaaacttaggtcagtatataaactcaaataagtctaatccaaacagaccct 922319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 28763424 - 28763496
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataa 133  Q
    |||||||||||||| |  ||||||||||||||||| | ||||| |||||||||||||||| || | |||||||    
T  28763424 cttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaaaacttatgttactagataa 28763496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 36963364 - 36963268
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccc 161  Q
    ||||||||||||  |||||||||  |||||| | ||||| |||||||||||||||| | || ||||| | |||||||| | ||||||||||| ||||    
T  36963364 tgaaaattgtcaaaagctgtttttgtaagttctcccaaacagtctcacaaaacttatgccagtagattagctcaaataagccaatccaaacagaccc 36963268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 1096570 - 1096641
Alignment:
Q  85 tttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||| ||| | ||||| | |||||||||||||| |||| || ||||||||||||| |||||||||||||    
T  1096570 tttcatatgttctcccaaaaaatctcacaaaacttatgtcactaaataaactcaaataagtcaatccaaaca 1096641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 26771325 - 26771380
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaactta 120  Q
    ||||||||||||  ||||||||||||||||| | ||||| ||||||||||||||||    
T  26771325 tgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaaaactta 26771380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 30657835 - 30657800
Alignment:
Q  36 tgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||||||||||||||||||||||    
T  30657835 tgtttttataagctatattggagaacttatgaaaat 30657800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 38602411 - 38602478
Alignment:
Q  89 ataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||| | ||||| || ||||||||||||| |||| ||||||| |||||||| |||||||||||||    
T  38602411 ataagttctcccaaacagcctcacaaaacttatgtcagtagataagctcaaataagtcaatccaaaca 38602478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 438
Target Start/End: Complemental strand, 1074229 - 1074187
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    |||||||| |||||| |||||||||||||||||||||||||||    
T  1074229 aaacttatatgagtaaataaactcaaataagtcaatccaaaca 1074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 6525874 - 6525964
Alignment:
Q  62 ttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatcca 152  Q
    |||||||||||||||  | | ||  ||||||||||| ||||| |||| ||||||||||| || | |||||||||||||||| | |||||||    
T  6525874 ttatgaaaattgtcataaacagtcatcataagttttcccaaacagtcacacaaaacttatgttagtagataaactcaaataagacaatcca 6525964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 35534621 - 35534532
Alignment:
Q  67 aaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||  ||||||||||| ||||| |  |||| |||||||||||||||| || | ||||||| |||||||| |||| || |||||    
T  35534621 aaaattgtcataagctgttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaataagtcattctaaaca 35534532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 439
Target Start/End: Original strand, 10727464 - 10727496
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||||||||||||||||||||||||||||    
T  10727464 agtagataaactcaaataagtcaatccaaacag 10727496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 15180648 - 15180692
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||  |||||||||||||||||||| |||||||||||||    
T  15180648 aaacttatggcagtagataaactcaaataagccaatccaaacagg 15180692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 142
Target Start/End: Complemental strand, 1058093 - 1058010
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    |||| ||||||| |||||  ||| ||||||| ||||| | ||||| |||||||||||||||| || | ||||||| ||||||||    
T  1058093 aactaatgaaaaatgtcataagcagttttcaaaagttctcccaaacagtctcacaaaacttatgtaagtagataagctcaaata 1058010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 1058255 - 1058168
Alignment:
Q  231 atttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||||||||| |  ||| ||||  |||||| ||| ||||| |||||||||| |||| ||||||||||| |||  |||||||||    
T  1058255 atttgcagcttatagcacaagcgcttactatgataagcgcttatgtataagcttacataagctatttttatagcaaatcataaaataa 1058168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 6525823 - 6525858
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaa 70  Q
    |||||||||||||||||||| |||||||||||||||    
T  6525823 ttgtttttataagctatatttgagaacttatgaaaa 6525858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 10758267 - 10758176
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||  |||||||||||||| || |  |||| |||||||||||||||| || |  ||||||  ||||||| |||||| ||||||    
T  10758267 tgaaaattgtcataagctgttttcataaattctatcaaacagtctcacaaaacttatgttagcagataagttcaaataagtcaattcaaaca 10758176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 11376769 - 11376840
Alignment:
Q  72 tgtcacgagctgttttcataagtttttccaaatagtctcacaa-aacttaggtcaatagataaactcaaata 142  Q
    |||||| |||| |||||||||||| | |||||||||||||||| ||||||  ||| ||||||| ||||||||    
T  11376769 tgtcacaagctattttcataagttctcccaaatagtctcacaagaacttatatcagtagataagctcaaata 11376840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 439
Target Start/End: Complemental strand, 14280382 - 14280339
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||||  |||||||||| ||||||||||||||||||||||    
T  14280382 aaacttatgccagtagataaaatcaaataagtcaatccaaacag 14280339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 27754479 - 27754518
Alignment:
Q  81 ctgttttcataagtttttccaaatagtctcacaaaactta 120  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  27754479 ctgttttcataagttctcccaaatagtctcacaaaactta 27754518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 30657747 - 30657696
Alignment:
Q  105 agtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||| ||| |||| |||||||||||||||| ||| |||||||||    
T  30657747 agtctcacaaaatttatgtcattagataaactcaaataagtcgatccaaaca 30657696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 35644002 - 35643907
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||||  | || |||||||||||| | ||||| |||||||||||| ||| | || ||||||| | |||||| | |||||| ||||    
T  35644002 cttatgaaaattgtcataaactattttcataagttatcccaaacagtctcacaaaaattatgccagtagataagcccaaataagccaatcccaaca 35643907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 1096599 - 1096641
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    |||||||||| | || |||||||||||||||||||||||||||    
T  1096599 aaacttatgtcactaaataaactcaaataagtcaatccaaaca 1096641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 434
Target Start/End: Original strand, 6525926 - 6525964
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatcca 434  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  6525926 aaacttatgttagtagataaactcaaataagacaatcca 6525964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 6881989 - 6882047
Alignment:
Q  67 aaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtca 125  Q
    |||||| ||| |||||||||||||| ||| | ||||| |||||||||||||||| ||||    
T  6881989 aaaattatcatgagctgttttcataggttctcccaaacagtctcacaaaacttatgtca 6882047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 9130295 - 9130237
Alignment:
Q  99 ccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaa 157  Q
    |||||||||||||||||||||| | || ||||||| |||||||| |  |||||||||||    
T  9130295 ccaaatagtctcacaaaacttatgccagtagataagctcaaataagctaatccaaacaa 9130237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 69
Target Start/End: Original strand, 12976219 - 12976253
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaa 69  Q
    |||||||||||||||||||| ||||||||||||||    
T  12976219 ttgtttttataagctatattagagaacttatgaaa 12976253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 15180632 - 15180690
Alignment:
Q  98 tccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||| ||||||| |||||||| | || |||||||||||||||| | |||||||||||    
T  15180632 tccaaaaagtctcataaaacttatggcagtagataaactcaaataagccaatccaaaca 15180690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 445
Target Start/End: Original strand, 16162880 - 16162918
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacagggccat 445  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  16162880 agtagataaactcaaataagccaatccaaacaggcccat 16162918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 318
Target Start/End: Complemental strand, 35534750 - 35534705
Alignment:
Q  272 tatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  35534750 tatgcataagcttacataagatatttttatag-aaaagataaaataa 35534705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 40859796 - 40859703
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaac 155  Q
    ||||||||||||||||  ||||||||||||||| | | | ||| || ||||||||||||| || |  |||||| |||||||| | ||||||||||    
T  40859796 cttatgaaaattgtcataagctgttttcataag-tctccaaaacagcctcacaaaacttatgttagcagataagctcaaataagccaatccaaac 40859703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 1433648 - 1433685
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  1433648 cttatgtgagtatataaattcaaataagtcaatccaaa 1433685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 440
Target Start/End: Complemental strand, 5349536 - 5349503
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||| |||||||||||||||||||||||||    
T  5349536 agtagatatactcaaataagtcaatccaaacagg 5349503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 6496848 - 6496811
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaac 437  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  6496848 ttatgttagtagataaactcaaacaagtcaatccaaac 6496811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 440
Target Start/End: Original strand, 7008718 - 7008751
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||||||||||||||||||||| ||||||||    
T  7008718 agtagataaactcaaataagtcaattcaaacagg 7008751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 35534587 - 35534530
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||||| |  |||||||||| ||||||||| ||||||||||||| || |||||||    
T  35534587 aaacagtctcacaaaacttatgttagtagataagctcaaataagtcattctaaacagg 35534530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 35749583 - 35749506
Alignment:
Q  62 ttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaa 139  Q
    ||||||||| ||  || ||||||||||||||||| |  |||| || ||| ||||||||| |||||||||||| |||||    
T  35749583 ttatgaaaaatgctacaagctgttttcataagttctctcaaacagcctcgcaaaacttatgtcaatagataagctcaa 35749506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Complemental strand, 43368658 - 43368617
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||| |||||||||  |||||||||||||||||||||||    
T  43368658 cttatgttagtagataagatcaaataagtcaatccaaacagg 43368617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 6881936 - 6881968
Alignment:
Q  39 ttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||| ||||||||||||||||||||    
T  6881936 ttttataagctaaattggagaacttatgaaaat 6881968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 11861810 - 11861846
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||| | ||||||||||||||||    
T  11861810 ttgtttttataagctataatagagaacttatgaaaat 11861846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 15180547 - 15180583
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||| |||||||||||||||||||||| |||||||    
T  15180547 ttgtttctataagctatattggagaacttctgaaaat 15180583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 15247738 - 15247694
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||| |||||||||| |||||||||||||  ||||||||    
T  15247738 aaacttatgtaagtagataaattcaaataagtcaaatcaaacagg 15247694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 18133666 - 18133698
Alignment:
Q  39 ttttataagctatattggagaacttatgaaaat 71  Q
    |||||||| ||||||||||||||||||||||||    
T  18133666 ttttataaactatattggagaacttatgaaaat 18133698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 30657835 - 30657799
Alignment:
Q  320 tgtttttataagctgtattgaagaacttatgaaaata 356  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  30657835 tgtttttataagctatattggagaacttatgaaaata 30657799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 35374413 - 35374369
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||| |||| |||||||| ||||||||| ||||||||||||||    
T  35374413 aaacttgtgtgggtagataagctcaaataactcaatccaaacagg 35374369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 38750434 - 38750494
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    |||| ||||||||| || |||||| |||||||||||||| |  | ||||||||||||||||    
T  38750434 tgttctcataagttctttcaaataatctcacaaaacttatgcaagtagataaactcaaata 38750494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 439
Target Start/End: Complemental strand, 40728361 - 40728329
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||| ||||||||||||||||||||||||    
T  40728361 agtagatagactcaaataagtcaatccaaacag 40728329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 44843396 - 44843440
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||  ||| ||||||||| ||||||||||||||||||||    
T  44843396 aaacttatgcaagtggataaactccaataagtcaatccaaacagg 44843440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 9e-19; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 42404061 - 42403942
Alignment:
Q  36 tgtttttataagctatattggagaacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaac 135  Q
    ||||||||||||| ||||| |||  ||||||||||||||||  ||||||||||| || || | |||||||| | ||||||||||| |||| | ||||| |    
T  42404061 tgtttttataagccatatttgagtgcttatgaaaattgtcataagctgttttcagaaattctcccaaatag-cacacaaaacttatgtcagttgataagc 42403963  T
Q  136 tcaaatatgtcaatccaaaca 156  Q
    ||||||| |||||||||||||    
T  42403962 tcaaataagtcaatccaaaca 42403942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 15173319 - 15173223
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaac 155  Q
    ||||||||||||||||||  |||| |||||||||  | | ||||| |||||||||||||||| |||| |||||||  ||||||| ||||||||||||    
T  15173319 aacttatgaaaattgtcataagctattttcataaagtctcccaaacagtctcacaaaacttatgtcagtagataagttcaaataagtcaatccaaac 15173223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 41336816 - 41336912
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaa 157  Q
    |||||||||| |||||  |||||||||| |||||| |||| ||   |||||||||||||| || | |||||||||||||||| ||||||||||||||    
T  41336816 cttatgaaaactgtcataagctgttttcttaagttcttcctaactatctcacaaaacttatgtgagtagataaactcaaataagtcaatccaaacaa 41336912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 52315190 - 52315118
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaa 154  Q
    |||||| ||||||| ||||||| | |||||||||||||| |||| |||||||||||||||| |||||||||||    
T  52315190 tgttttgataagttcttccaaacaatctcacaaaacttacgtcagtagataaactcaaataagtcaatccaaa 52315118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 17822879 - 17822784
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||| |||||  ||||||||||||| ||| | | ||||||||||||| |||||| |||| ||||||| |||||||| || ||||||||||    
T  17822879 cttatgaaaaatgtcataagctgttttcatatgttctcctaaatagtctcacagaacttatgtcagtagataagctcaaataagttaatccaaaca 17822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 54426099 - 54426194
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||||  |||||||||| |||||| | ||||  |||||||||||||||| | || ||||||| |||||||| | |||||||||||    
T  54426099 cttatgaaaattgtcataagctgttttcctaagttctcccaagcagtctcacaaaacttatgccagtagataagctcaaataagccaatccaaaca 54426194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 41336869 - 41336911
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41336869 aaacttatgtgagtagataaactcaaataagtcaatccaaaca 41336911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 22030263 - 22030352
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaa 154  Q
    ||||||||||||  ||||||||||||||||| | |||||||| ||||||||||||| |  |||||| || |||||||| |||||| ||||    
T  22030263 tgaaaattgtcataagctgttttcataagttctcccaaataggctcacaaaacttatgctaatagacaagctcaaataagtcaatacaaa 22030352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 27043826 - 27043743
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    |||| ||| ||||| || ||||||| ||| |||||||||||| |||| ||||||| |||||||| ||||||||||||| |||||    
T  27043826 agctatttgcataacttcttccaaacagtttcacaaaacttatgtcagtagataagctcaaataagtcaatccaaacagaccct 27043743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 21731669 - 21731575
Alignment:
Q  62 ttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||| |  ||||||||||||||||| | ||||| | |||||||||||||| |||| ||||||  ||||||||   |||||||||||    
T  21731669 ttatgaaaattgtgataagctgttttcataagttctcccaaacaatctcacaaaacttatgtcagtagatatgctcaaataaaccaatccaaaca 21731575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 445
Target Start/End: Complemental strand, 22662209 - 22662163
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacagggccat 445  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  22662209 cttatgttagtagataaactcaaataagtcaatccaaacaggcccat 22662163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 399 - 445
Target Start/End: Complemental strand, 22666688 - 22666642
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacagggccat 445  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  22666688 cttatgttagtagataaactcaaataagtcaatccaaacaggcccat 22666642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 24169319 - 24169420
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaacc 160  Q
    |||||||||| |||||  |||| |||| | ||||| |  ||||||||||||||||||||| | || ||||||||||| |||| | |||||||||||| ||    
T  24169319 cttatgaaaaatgtcataagctatttttaaaagttctctcaaatagtctcacaaaacttatgccagtagataaactctaataagccaatccaaacaagcc 24169418  T
Q  161 ct 162  Q
    ||    
T  24169419 ct 24169420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 40174633 - 40174694
Alignment:
Q  81 ctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    ||||||||||||||| | ||||| |||||||||||||||| || | ||||||||||||||||    
T  40174633 ctgttttcataagttatcccaaacagtctcacaaaacttatgttagtagataaactcaaata 40174694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 9760446 - 9760482
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||||||||||||||||||||    
T  9760446 ttgtttttataagctatattggagaacttatgaaaat 9760482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 13126590 - 13126490
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaacc 160  Q
    ||||||| || |||||  ||||||||| ||||||| ||||||| |||||||||||||||| || | ||| ||| || ||||| | ||||||||||| |||    
T  13126590 cttatgataaatgtcataagctgtttttataagttcttccaaacagtctcacaaaacttatgttagtaggtaagctaaaataagccaatccaaacagacc 13126491  T
Q  161 c 161  Q
    |    
T  13126490 c 13126490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 39603184 - 39603089
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaa 157  Q
    ||||| ||||||||||  |||||||||| |||||| | ||||| ||||||||||||||||   ||||||| || |||||||| | ||||||||||||    
T  39603184 cttataaaaattgtcataagctgttttcctaagttctcccaaacagtctcacaaaacttataccaataga-aagctcaaataagccaatccaaacaa 39603089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 8705017 - 8705092
Alignment:
Q  81 ctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||| ||||||| | ||||  |||||||||||||||| |||||||||||| |||||||  | |||||||||||    
T  8705017 ctgtttttataagttctcccaatcagtctcacaaaacttatgtcaatagataagctcaaatgagccaatccaaaca 8705092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 25571369 - 25571412
Alignment:
Q  397 aacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  25571369 aacttatgtcagtagataaactcaaataagccaatccaaacagg 25571412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 439
Target Start/End: Complemental strand, 27043791 - 27043748
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  27043791 aaacttatgtcagtagataagctcaaataagtcaatccaaacag 27043748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 55437153 - 55437227
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||||| || |||| | | |||||||||||| | || |||||||||||||||| | |||||||||||    
T  55437153 tgttttcataagttctttcaaacaatttcacaaaacttatggcagtagataaactcaaataagccaatccaaaca 55437227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 26925 - 26892
Alignment:
Q  38 tttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||||||||||||||||||||    
T  26925 tttttataagctatattggagaacttatgaaaat 26892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 33587024 - 33586983
Alignment:
Q  30 atagattgtttttataagctatattggagaacttatgaaaat 71  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  33587024 ataggttgtttttataagctatatcggagaacttatgaaaat 33586983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 49940163 - 49940086
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||||| |  |||| |||||||||||||||| || |  || ||| |||||||| |||||||||||||    
T  49940163 agctgttttcataagttctctcaaacagtctcacaaaacttatgttagcaggtaagctcaaataagtcaatccaaaca 49940086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 50681247 - 50681182
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataat 319  Q
    |||||||||||| ||| ||||| ||||||||||  ||| ||||||||||| | |||||||||||||    
T  50681247 cttatcatgataagcgtttatgtataagcttacaaaagctatttttataggataagataaaataat 50681182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 438
Target Start/End: Original strand, 3891710 - 3891742
Alignment:
Q  406 gagtagataaactcaaataagtcaatccaaaca 438  Q
    |||||||||||||||||||||||||||||||||    
T  3891710 gagtagataaactcaaataagtcaatccaaaca 3891742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 9720612 - 9720572
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  9720612 cttatgttagtagataaactcaaataagtcaatcccaacag 9720572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 9760372 - 9760416
Alignment:
Q  274 tgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||||| | |||||||||||||| ||||||||||||||||    
T  9760372 tgcataagctttcataagttatttttattgaaaaagataaaataa 9760416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 26590636 - 26590676
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  26590636 cttatgtaagtagataaactcaaataattcaatccaaacag 26590676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 39603234 - 39603198
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||| |||||||||||||||||||||||    
T  39603234 ttgtttttataaggtatattggagaacttatgaaaat 39603198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 42403984 - 42403940
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||    
T  42403984 aaacttatgtcagttgataagctcaaataagtcaatccaaacagg 42403940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 52315158 - 52315118
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  52315158 aaacttacgtcagtagataaactcaaataagtcaatccaaa 52315118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 54426049 - 54426085
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||| ||||||||||||||||||||||||    
T  54426049 ttgtttttataatctatattggagaacttatgaaaat 54426085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 55437185 - 55437229
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||  |||||||||||||||||||| |||||||||||||    
T  55437185 aaacttatggcagtagataaactcaaataagccaatccaaacagg 55437229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 439
Target Start/End: Complemental strand, 7368003 - 7367972
Alignment:
Q  408 gtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||||||||||||||||||||||||||||    
T  7368003 gtagataaactcaaataagtcaatccaaacag 7367972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 318
Target Start/End: Complemental strand, 13216345 - 13216298
Alignment:
Q  271 ttatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||||| |||||  ||||||||||||||| ||||||||||||||    
T  13216345 ttatgcataaacttacacaagttatttttatagcaaaagataaaataa 13216298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 17822825 - 17822782
Alignment:
Q  397 aacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||    
T  17822825 aacttatgtcagtagataagctcaaataagttaatccaaacagg 17822782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 25904237 - 25904150
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaa 148  Q
    |||||||||| || ||  ||||||||||||||| | | ||||| |||||||||||| ||| |||| | ||||| |||||||| |||||    
T  25904237 cttatgaaaaatggcataagctgttttcataagctctcccaaacagtctcacaaaatttatgtcattggataagctcaaataagtcaa 25904150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 49939965 - 49939906
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaactta 120  Q
    |||||||| | |||||  |||| |||||||||||| ||||||||||||||||||| ||||    
T  49939965 cttatgaacaatgtcataagctcttttcataagttcttccaaatagtctcacaaagctta 49939906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 50681103 - 50681044
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaactta 120  Q
    ||||||||||||||||  | ||||||||||||||| |  |||| ||||||||||||||||    
T  50681103 cttatgaaaattgtcattaactgttttcataagttctctcaaacagtctcacaaaactta 50681044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 52169978 - 52169939
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  52169978 cttatgtaaatagataaactcaaataagtcaatccaaaca 52169939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 438
Target Start/End: Original strand, 52428784 - 52428815
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||||||||||||||||||||||||||    
T  52428784 agtagataaactcaaataagtcaatccaaaca 52428815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 437157 - 437083
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||||||| |||||||||||||||||| ||| |  | ||||||  ||||||||   |||||||||||    
T  437157 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 437083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 15173277 - 15173223
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaac 437  Q
    ||||||||| |  |||||||||| |||||||||  ||||||||||||||||||||    
T  15173277 aaacagtctcacaaaacttatgtcagtagataagttcaaataagtcaatccaaac 15173223  T

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Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 21731720 - 21731686
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaa 69  Q
    |||||||||||||||||||||||||| ||||||||    
T  21731720 ttgtttttataagctatattggagaatttatgaaa 21731686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 40831093 - 40831059
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaa 69  Q
    |||||||||||||||| ||||||||||||||||||    
T  40831093 ttgtttttataagctagattggagaacttatgaaa 40831059  T

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Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 53294107 - 53294033
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||| |||||| ||||| ||||| |||||||| | |||| ||||||| | |||||  |||||||||||||    
T  53294107 tgttttcatgagttttcccaaacagtcttacaaaactcatgtcagtagataagcacaaattagtcaatccaaaca 53294033  T

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Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 403462 - 403503
Alignment:
Q  277 ataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||| ||||||||| |||||||| ||||||||||||||    
T  403462 ataagcttgcgtaagttacttttatagcaaaagataaaataa 403503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 1706696 - 1706757
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaa 140  Q
    |||||||||||||| || |  ||||  ||||||||||||||| |||| ||||||||||||||    
T  1706696 agctgttttcataatttctctcaaaccgtctcacaaaacttatgtcagtagataaactcaaa 1706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 71
Target Start/End: Original strand, 2244064 - 2244093
Alignment:
Q  42 tataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||||||||||||||||    
T  2244064 tataagctatattggagaacttatgaaaat 2244093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 356
Target Start/End: Original strand, 9760446 - 9760483
Alignment:
Q  319 ttgtttttataagctgtattgaagaacttatgaaaata 356  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  9760446 ttgtttttataagctatattggagaacttatgaaaata 9760483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 17884074 - 17884111
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaatt 72  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  17884074 ttgttttcataagctatattggagagcttatgaaaatt 17884111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 20719777 - 20719818
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaactta 120  Q
    |||||||||| |||||| |||||||||||| |||||||||||    
T  20719777 agctgttttcttaagttcttccaaatagtcgcacaaaactta 20719818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 449
Target Start/End: Complemental strand, 21731617 - 21731564
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagggccatagtg 449  Q
    |||||||||| ||||||||  |||||||||  ||||||||||||| ||||||||    
T  21731617 aaacttatgtcagtagatatgctcaaataaaccaatccaaacaggcccatagtg 21731564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 29774314 - 29774391
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||| |||||||||||| | | ||| ||||||||||||||   |||| || ||||||||||||| |||| ||||||||    
T  29774314 agctattttcataagttctcctaaacagtctcacaaaactctagtcagtaaataaactcaaataagtcattccaaaca 29774391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 37636144 - 37636107
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  37636144 cttatgttagtagataaactcaaataaatcaatccaaa 37636107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 39691123 - 39691066
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||||| |  |||||||||  ||||||||| ||||||||||||||| ||||||||    
T  39691123 aaacagtctcacaaaacttatgctagtagataagctcaaataagtcaattcaaacagg 39691066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 356
Target Start/End: Complemental strand, 39691207 - 39691170
Alignment:
Q  319 ttgtttttataagctgtattgaagaacttatgaaaata 356  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  39691207 ttgtttttataagctatattgaagaacttacgaaaata 39691170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 40174653 - 40174702
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatc 432  Q
    ||||||||| |  |||||||||| ||||||||||||||||||| ||||||    
T  40174653 aaacagtctcacaaaacttatgttagtagataaactcaaataaatcaatc 40174702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 43505871 - 43505932
Alignment:
Q  257 atcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||| ||  ||||| |||||||| | |||| ||||||||||| ||||||||||||||    
T  43505871 atcatgataagcacttatgtataagcttgcataagctatttttatagcaaaagataaaataa 43505932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 46588134 - 46588101
Alignment:
Q  38 tttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||| |||||||||||||||||||||||    
T  46588134 tttttataagttatattggagaacttatgaaaat 46588101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 46592270 - 46592237
Alignment:
Q  38 tttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||| |||||||||||||||||||||||    
T  46592270 tttttataagttatattggagaacttatgaaaat 46592237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 439
Target Start/End: Original strand, 679411 - 679443
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||||||||||||||||||||| |||||||    
T  679411 agtagataaactcaaataagtcaattcaaacag 679443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 439
Target Start/End: Original strand, 2244147 - 2244203
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||| | || |||||||||| |||||||||||||  |||| |||||||||||||    
T  2244147 aaacagtttcaaaaaacttatgtcagtagataaactcggataaatcaatccaaacag 2244203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 7839441 - 7839389
Alignment:
Q  20 ttgtatatgc-atagattgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||| ||| ||||||||||||||||| |||| |||||||| ||||||    
T  7839441 ttgtatatgctataaattgtttttataagctagattgaagaacttacgaaaat 7839389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 438
Target Start/End: Original strand, 12163006 - 12163034
Alignment:
Q  410 agataaactcaaataagtcaatccaaaca 438  Q
    |||||||||||||||||||||||||||||    
T  12163006 agataaactcaaataagtcaatccaaaca 12163034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 440
Target Start/End: Complemental strand, 16494752 - 16494724
Alignment:
Q  412 ataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||||||||||||||||||||||    
T  16494752 ataaactcaaataagtcaatccaaacagg 16494724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 17822929 - 17822893
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  17822929 ttgttttcataagctatcttggagaacttatgaaaat 17822893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 20031854 - 20031902
Alignment:
Q  109 tcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaa 157  Q
    |||||||||||| | ||  | ||||||||||||||||||||||||||||    
T  20031854 tcacaaaacttacgccagaatataaactcaaatatgtcaatccaaacaa 20031902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 439
Target Start/End: Original strand, 28615454 - 28615486
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||||||| ||||||||||||||||||||    
T  28615454 agtagataaacttaaataagtcaatccaaacag 28615486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 29388723 - 29388767
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||| |||||||||  ||||||||||||| |||||||||    
T  29388723 aaacttatgttagtagataaggtcaaataagtcaacccaaacagg 29388767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 32071975 - 32072015
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||| | ||||||||||||||||||||| |||||||||    
T  32071975 cttatgtcaatagataaactcaaataagtcagtccaaacag 32072015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 438
Target Start/End: Complemental strand, 37575883 - 37575855
Alignment:
Q  410 agataaactcaaataagtcaatccaaaca 438  Q
    |||||||||||||||||||||||||||||    
T  37575883 agataaactcaaataagtcaatccaaaca 37575855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 39603634 - 39603598
Alignment:
Q  169 ggcctatttcgataaatagcttatttgcagcttatag 205  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  39603634 ggcctatttggataaacagcttatttgcagcttatag 39603598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 39691207 - 39691171
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  39691207 ttgtttttataagctatattgaagaacttacgaaaat 39691171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 41433487 - 41433527
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||| || |||||||||||||||||||||| |||||||    
T  41433487 cttatgtcaggagataaactcaaataagtcaattcaaacag 41433527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 49940141 - 49940085
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||||| |  |||||||||| || || ||| |||||||||||||||||||||||    
T  49940141 aaacagtctcacaaaacttatgttagcaggtaagctcaaataagtcaatccaaacag 49940085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 50681153 - 50681117
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  50681153 ttgtttatataagctatattggagaaattatgaaaat 50681117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 157
Target Start/End: Complemental strand, 52169970 - 52169938
Alignment:
Q  125 aatagataaactcaaatatgtcaatccaaacaa 157  Q
    |||||||||||||||||| ||||||||||||||    
T  52169970 aatagataaactcaaataagtcaatccaaacaa 52169938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 54426152 - 54426196
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||    
T  54426152 aaacttatgccagtagataagctcaaataagccaatccaaacagg 54426196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 31365202 - 31365111
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatcca 152  Q
    ||||||||||||||||  ||||| ||||||||||| | ||||| |||||||||||||||| | |||||||||| |||||||| | |||||||    
T  31365202 cttatgaaaattgtcataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaaataagccaatcca 31365111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 43046704 - 43046815
Alignment:
Q  43 ataagctatattggagaacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    ||||||||| |||||||||||||||| ||| |||  ||||||||||||||||| | ||||| ||||||||||||| || || |||||||||  |||||||    
T  43046704 ataagctatcttggagaacttatgaacatt-tcaaaagctgttttcataagttctcccaaacagtctcacaaaacatatgt-aatagataagttcaaata 43046801  T
Q  143 tgtcaatccaaaca 156  Q
     ||||||| |||||    
T  43046802 agtcaatctaaaca 43046815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 31365322 - 31365232
Alignment:
Q  62 ttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatcca 152  Q
    |||||||||||||||  |||||| |||||||||| | ||||| ||| |||||||| ||| | ||||||||||||||||||| | |||||||    
T  31365322 ttatgaaaattgtcataagctgtattcataagttctcccaaacagtgtcacaaaaattatgccaatagataaactcaaataagccaatcca 31365232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 49034327 - 49034242
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaactta 120  Q
    ||||||||||||||||||||||||||||| ||||||||||||   || |||||||||| || | ||||  |||||||||| |||||    
T  49034327 ttgtttttataagctatattggagaacttctgaaaattgtcagatgccgttttcataaattctcccaatcagtctcacaagactta 49034242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 18405844 - 18405764
Alignment:
Q  62 ttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    ||||||||| ||||  || ||||||||||||||| || |||| |||||||||||||||| |||| ||||||| ||||||||    
T  18405844 ttatgaaaagtgtcgtgaactgttttcataagttcttgcaaacagtctcacaaaacttatgtcagtagataagctcaaata 18405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 25447219 - 25447163
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||||| |  |||||||||| |||||||||||||||||||||||||||||||||    
T  25447219 aaacagtctcacaaaacttatgtcagtagataaactcaaataagtcaatccaaacag 25447163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 25447220 - 25447164
Alignment:
Q  100 caaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||| |||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  25447220 caaacagtctcacaaaacttatgtcagtagataaactcaaataagtcaatccaaaca 25447164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 24685004 - 24684917
Alignment:
Q  231 atttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||||||||| |  |  ||| ||||||||| ||| || |||||||| |||| |||| ||||||||||||||||||||||||||    
T  24685004 atttgcagcttatagcacaaattctcatcatgataagcgcttttgcataagtttacataagctatttttatagaaaaagataaaataa 24684917  T

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Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 30956807 - 30956720
Alignment:
Q  231 atttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||||||||| |  ||  |||||||||||| ||  |||||||||||||||| |||| ||||| ||||| ||||||||||||||    
T  30956807 atttgcagcttatagcacaagggcttatcatgataagcatttatgcataagcttacataagctatttctatagcaaaagataaaataa 30956720  T

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Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 30972619 - 30972532
Alignment:
Q  231 atttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||||||||| |  ||  |||||||||||| ||  |||||||||||||||| |||| ||||| ||||| ||||||||||||||    
T  30972619 atttgcagcttatagcacaagggcttatcatgataagcatttatgcataagcttacataagctatttctatagcaaaagataaaataa 30972532  T

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Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 20257590 - 20257688
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagat-aaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||||||  ||||| ||||||||||| | ||||| |||||||||||| ||| | |  ||||| ||||||||||| | |||||||||||    
T  20257590 aacttatgaaaattgtcattagctgctttcataagttctcccaaacagtctcacaaaatttatggctgtagataaaactcaaataagccaatccaaaca 20257688  T

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Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 901930 - 901966
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||||||||||||||||||||    
T  901930 ttgtttttataagctatattggagaacttatgaaaat 901966  T

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Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 26911700 - 26911740
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  26911700 aaacttatgtcagtagataaactcaaataagtcaatccaaa 26911740  T

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Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 39980735 - 39980771
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||||||||||||||||||||    
T  39980735 ttgtttttataagctatattggagaacttatgaaaat 39980771  T

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Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 47132321 - 47132373
Alignment:
Q  20 ttgtatatgc-atagattgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  47132321 ttgtatatgctataggttgtttttataagctatattggagaagttatgaaaat 47132373  T

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Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 19983693 - 19983752
Alignment:
Q  255 ttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaa 314  Q
    |||| |||||| ||| ||||| |||||||||| |||||||||| ||||||||||||||||    
T  19983693 ttattatgataagcgtttatgtataagcttacataagttatttctatagaaaaagataaa 19983752  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 20880532 - 20880627
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||||  ||||||||||||| ||| | ||||||||||| |  ||||||| |  | ||||||| |||||||| | |||||||||||    
T  20880532 cttatgaaaattgtcataagctgttttcataggttctcccaaatagtctaaggaaacttatgcaagtagataagctcaaataagccaatccaaaca 20880627  T

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Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 435
Target Start/End: Complemental strand, 33405153 - 33405114
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaa 435  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  33405153 aaacttatgtcagtagataaactcaaataagtcaatccaa 33405114  T

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Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 35959637 - 35959550
Alignment:
Q  231 atttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||||||||  |  |||||||||||||||| | | ||||| ||||||| || |||| ||||| ||||||||| ||||||||||    
T  35959637 atttgcagcttatatcacaagctcttatcatgataagagcttatgtataagctcacataagctatttctatagaaaaggataaaataa 35959550  T

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Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 26911639 - 26911740
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaac------ttaggtcaatagataaactcaaatatgtcaatcca 152  Q
    ||||||||||||||||||  |||||||||||||  || | |||||  ||||||||||||      ||| |||| |||||||||||||||| |||||||||    
T  26911639 aacttatgaaaattgtcataagctgttttcatatattatcccaaacggtctcacaaaacaaaaacttatgtcagtagataaactcaaataagtcaatcca 26911738  T
Q  153 aa 154  Q
    ||    
T  26911739 aa 26911740  T

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Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 32582846 - 32582888
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  32582846 aaacttatggtagtagataaactcaaataagtcaatccaaaca 32582888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 9832751 - 9832674
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||| ||||| | ||||| ||| | |||||||||| ||||||| |||| |||||||| ||||||| |||||    
T  9832751 agctgttttcaaaagttctcccaaacagtttgacaaaacttatgtcaataaataagctcaaataagtcaatctaaaca 9832674  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 35696243 - 35696280
Alignment:
Q  34 attgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||||||||||||| |||||||    
T  35696243 attgtttttataagctatattggagaacttgtgaaaat 35696280  T

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Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 16073002 - 16072958
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||    
T  16073002 aaacttatgtcattagataagctcaaataagtcaatccaaacagg 16072958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 20880466 - 20880518
Alignment:
Q  20 ttgtatatgc-atagattgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||| ||| | |||||||| |||||||||||||||||||||||||||    
T  20880466 ttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaat 20880518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 24684829 - 24684737
Alignment:
Q  68 aaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaacc 160  Q
    |||||||||  || ||||||||||||||   |||||  |||||| |||||||| | || ||||||| |||||||| || ||||||||||||||    
T  24684829 aaattgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaacaaacc 24684737  T

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Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 34610821 - 34610725
Alignment:
Q  60 acttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||| | |||||  ||| ||||||||||||| | |||||||||   |||||||||| |||| ||||||| |||||||| ||| || ||||||    
T  34610821 acttatgaacaatgtcataagcagttttcataagttctcccaaatagttgtacaaaacttatgtcagtagataagctcaaataagtccatacaaaca 34610725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 36631115 - 36631079
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36631115 ttgtttttatgagctatattggagaacttatgaaaat 36631079  T

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Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 42799977 - 42799885
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaa-ctcaaatatgtcaatccaaaca 156  Q
    |||||| ||||| ||  |||||||||||||| | ||||| ||| ||||||||| || |||| |||||||| |||||||| | |||||||||||    
T  42799977 tgaaaactgtcatgacatgttttcataagttctcccaaagagtttcacaaaacatatgtcagtagataaagctcaaataagccaatccaaaca 42799885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 402556 - 402461
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||| | |||||  ||||||||||||| ||| | ||||| |||||  ||||||||| || | | |||||||||||||| ||||| |||||||    
T  402556 cttatgaacaatgtcataagctgttttcatacgttctcccaaacagtcttgcaaaacttatgttagttgataaactcaaataggtcaacccaaaca 402461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 16073007 - 16072960
Alignment:
Q  109 tcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||| |||| ||||||| |||||||| |||||||||||||    
T  16073007 tcacaaaacttatgtcattagataagctcaaataagtcaatccaaaca 16072960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 30443900 - 30443935
Alignment:
Q  36 tgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||| ||||||||||||||||||||||||    
T  30443900 tgtttttataaactatattggagaacttatgaaaat 30443935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 34637981 - 34637898
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    ||||||||||||||||| | ||||| | ||||||||||  |   ||||||  ||| |||||||| |||||||||||||||||||    
T  34637981 agctgttttcataagttctcccaaacaatctcacaaaatgtgtatcaataattaacctcaaataagtcaatccaaacaaaccct 34637898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 49092785 - 49092820
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaa 70  Q
    |||||||||||||||||||| |||||||||||||||    
T  49092785 ttgtttttataagctatattagagaacttatgaaaa 49092820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 18405973 - 18405927
Alignment:
Q  271 ttatgcataagcttacgtaagttatttttatagaaaaagataaaata 317  Q
    ||||| |||||||||| |||||||||| ||||| |||||||||||||    
T  18405973 ttatgtataagcttacataagttatttatataggaaaagataaaata 18405927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 29114536 - 29114578
Alignment:
Q  398 acttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||| |||||||||| ||||||||||||||| |||||||    
T  29114536 acttatgtcagtagataaagtcaaataagtcaatcgaaacagg 29114578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 438
Target Start/End: Complemental strand, 31615509 - 31615479
Alignment:
Q  408 gtagataaactcaaataagtcaatccaaaca 438  Q
    |||||||||||||||||||||||||||||||    
T  31615509 gtagataaactcaaataagtcaatccaaaca 31615479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 33405160 - 33405114
Alignment:
Q  107 tctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaa 153  Q
    |||| ||||||||| |||| |||||||||||||||| ||||||||||    
T  33405160 tctcccaaaacttatgtcagtagataaactcaaataagtcaatccaa 33405114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 42747741 - 42747699
Alignment:
Q  398 acttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||  |||||||||||||||||||||||| |||||||||    
T  42747741 acttatggaagtagataaactcaaataagtcaaaccaaacagg 42747699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 445
Target Start/End: Complemental strand, 44014748 - 44014710
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacagggccat 445  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  44014748 agtagataaactcaaataagccaatccaaacaggcccat 44014710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 157
Target Start/End: Original strand, 45083215 - 45083245
Alignment:
Q  127 tagataaactcaaatatgtcaatccaaacaa 157  Q
    |||||||||||||||||||||||||||||||    
T  45083215 tagataaactcaaatatgtcaatccaaacaa 45083245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 440
Target Start/End: Original strand, 849824 - 849857
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||| |||||||||||||||||||||||    
T  849824 agtagataaattcaaataagtcaatccaaacagg 849857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 356
Target Start/End: Original strand, 901930 - 901967
Alignment:
Q  319 ttgtttttataagctgtattgaagaacttatgaaaata 356  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  901930 ttgtttttataagctatattggagaacttatgaaaata 901967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 944560 - 944593
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaa 68  Q
    |||||||||||||||| |||||||||||||||||    
T  944560 ttgtttttataagctaaattggagaacttatgaa 944593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 20170688 - 20170631
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||||| |  |||||||||| | ||||||| |||||||||| |||||||||||||    
T  20170688 aaacagtctcactaaacttatgtcactagataagctcaaataagccaatccaaacagg 20170631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 22203504 - 22203580
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||||| | ||||| |||||||||||| | | |||  ||||||| ||| ||||||| ||||||||||    
T  22203504 agctgttttcataagttct-ccaaacagtctcacaaaattaatgtcggtagataagctcgaatatgttaatccaaaca 22203580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 438
Target Start/End: Complemental strand, 26990181 - 26990144
Alignment:
Q  401 tatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  26990181 tatgtcagtagataagctcaaataagtcaatccaaaca 26990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 36189575 - 36189608
Alignment:
Q  38 tttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||| |||||||||||||||||||||||    
T  36189575 tttttataagatatattggagaacttatgaaaat 36189608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 440
Target Start/End: Complemental strand, 36769913 - 36769880
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||| |||||||||||||||||||||||    
T  36769913 agtagataaaatcaaataagtcaatccaaacagg 36769880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 356
Target Start/End: Original strand, 39980735 - 39980772
Alignment:
Q  319 ttgtttttataagctgtattgaagaacttatgaaaata 356  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  39980735 ttgtttttataagctatattggagaacttatgaaaata 39980772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 402503 - 402459
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||| ||| |||||||||||||| ||||| |||||||||    
T  402503 aaacttatgttagttgataaactcaaataggtcaacccaaacagg 402459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 584120 - 584196
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaac 155  Q
    |||||||||||||| || | | ||| ||||||||| |||||| |  | ||||||| |||||||| ||||||||||||    
T  584120 agctgttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 437
Target Start/End: Original strand, 584156 - 584196
Alignment:
Q  397 aacttatgtgagtagataaactcaaataagtcaatccaaac 437  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  584156 aacttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 447
Target Start/End: Complemental strand, 9832729 - 9832665
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacagggccatag 447  Q
    ||||||| |||  |||||||||| | || |||| |||||||||||||||| ||||||| ||||||    
T  9832729 aaacagtttgacaaaacttatgtcaataaataagctcaaataagtcaatctaaacaggtccatag 9832665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 20170689 - 20170633
Alignment:
Q  100 caaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||| |||||||| ||||||| |||| ||||||| |||||||| | |||||||||||    
T  20170689 caaacagtctcactaaacttatgtcactagataagctcaaataagccaatccaaaca 20170633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 21367673 - 21367709
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  21367673 ttgttttcataagctatcttggagaacttatgaaaat 21367709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 22203436 - 22203472
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  22203436 ttgttttcataagctatcttggagaacttatgaaaat 22203472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 24085334 - 24085258
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaac 155  Q
    ||||||||||||||||| | | ||  |||||||||||||||| | |  ||||||| |||||||| | ||||||||||    
T  24085334 agctgttttcataagttctccaaaccagtctcacaaaacttatgccggtagataagctcaaataagccaatccaaac 24085258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 141
Target Start/End: Original strand, 30443953 - 30444029
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaat 141  Q
    ||||||||||||  ||||||||||||||| | | ||||| |||||||| ||| ||| | || ||||||| |||||||    
T  30443953 tgaaaattgtcataagctgttttcataagctctaccaaacagtctcaccaaatttatgccagtagataagctcaaat 30444029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 30657398 - 30657438
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||| ||||||||||||||||||| ||||| |||||||    
T  30657398 cttatgtcagtagataaactcaaataaatcaattcaaacag 30657438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 439
Target Start/End: Complemental strand, 36507042 - 36507010
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||||||||||||||| ||||||||||||    
T  36507042 agtagataaactcaaataagccaatccaaacag 36507010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 36783337 - 36783285
Alignment:
Q  90 taagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    |||||| | ||||| ||||||||||||||||  | ||||||||||||||||||    
T  36783337 taagttctcccaaacagtctcacaaaacttatattaatagataaactcaaata 36783285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 432
Target Start/End: Complemental strand, 41848673 - 41848641
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatc 432  Q
    |||||| ||||||||||||||||||||||||||    
T  41848673 ttatgttagtagataaactcaaataagtcaatc 41848641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 411 - 439
Target Start/End: Complemental strand, 47904026 - 47903998
Alignment:
Q  411 gataaactcaaataagtcaatccaaacag 439  Q
    |||||||||||||||||||||||||||||    
T  47904026 gataaactcaaataagtcaatccaaacag 47903998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 50946244 - 50946204
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||| || |||||||||||||||||||| |||||||||    
T  50946244 cttatgttaggagataaactcaaataagtcattccaaacag 50946204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 51929369 - 51929277
Alignment:
Q  63 tatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaac 155  Q
    ||||||||||||||  | ||||||||| || || |  |||||||| |||||||||||| | || || ||||  ||||||| ||||||||||||    
T  51929369 tatgaaaattgtcataatctgttttcagaaattctctcaaatagtatcacaaaacttatgccagtaaataaggtcaaataagtcaatccaaac 51929277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 5e-17; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 30331811 - 30331908
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    ||||||||||||  || | |||||||||||| | ||||| |||||||||||||||| |||| ||||||| || ||||| |||||||||||||| ||||    
T  30331811 tgaaaattgtcataaggttttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaatccaaacaagccct 30331908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 44590098 - 44590173
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaa 154  Q
    ||||||||||||||||| || ||||  ||||||||||||||| ||| ||||||||||||||||| | |||||||||    
T  44590098 agctgttttcataagttctttcaaacggtctcacaaaacttatgtctatagataaactcaaataagccaatccaaa 44590173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 20933761 - 20933831
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaattgtcacgagctgttttcataagtttttccaaata 105  Q
    |||||||| |||||||||||||| ||||||||||||||||||  | ||||||||||||||| | |||||||    
T  20933761 ttgtttttctaagctatattggaaaacttatgaaaattgtcataaactgttttcataagttctcccaaata 20933831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 15305728 - 15305825
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||| ||  || |||| ||| ||||| | ||||| ||| |||||||||||| |||||||||||| |||||||| | |||||||||||    
T  15305728 aacttatgaaaattgccataagttgttgtcaaaagttctaccaaacagtttcacaaaacttatgtcaatagataagctcaaataagccaatccaaaca 15305825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 154
Target Start/End: Original strand, 42419853 - 42419942
Alignment:
Q  65 tgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaa 154  Q
    |||||| |||||  |||||||||| |||||| | ||||| ||||||| |||||||| ||||  ||||||||||||||| |||||||||||    
T  42419853 tgaaaaatgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaaataagtcaatccaaa 42419942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 42868619 - 42868555
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||||||| ||| ||||||||||| |||| |||| |||||| |||||||||||||||||||    
T  42868619 cttatcatgataggcgcttatgcataagtttacataagctattttcatagaaaaagataaaataa 42868555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 23974509 - 23974406
Alignment:
Q  59 aacttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaa 158  Q
    ||||| ||||||||||||  ||||||||||||||||| | | ||| | |||||| || || | |||| ||||||||| |||||| ||||||||||||| |    
T  23974509 aacttgtgaaaattgtcataagctgttttcataagttctccaaaacaatctcactaatctcatgtcagtagataaacccaaataagtcaatccaaacata 23974410  T
Q  159 ccct 162  Q
    ||||    
T  23974409 ccct 23974406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 28206272 - 28206330
Alignment:
Q  34 attgtttttataagctatattggagaacttatgaaaattgtcacgagctgttttcataa 92  Q
    |||||||||||||||||||||||||||||||| |||||| |||  ||| ||||||||||    
T  28206272 attgtttttataagctatattggagaacttataaaaattatcataagcagttttcataa 28206330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 41241290 - 41241228
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaat 316  Q
    |||||||||||||||| ||||| |||||||||| |||| ||||| ||||| ||||||||||||    
T  41241290 cttatcatgatatgcgcttatggataagcttacataagctatttctataggaaaagataaaat 41241228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 2416387 - 2416464
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||| ||||||| ||||||  ||| |||||||||||| || | |||||||||||||||| ||||||| |||||    
T  2416387 agctgttttaataagttcttccaagcagtttcacaaaacttatgttagtagataaactcaaataagtcaatctaaaca 2416464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 7928294 - 7928217
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||| ||||| || | || ||||||||| |||||| |||||||||||| |||||||| | |||||||||||    
T  7928294 agctgttttcaaaagttctttctaacagtctcacacaacttatgtcaatagataagctcaaataagccaatccaaaca 7928217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 42419889 - 42419942
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    ||||||||| || |||||||||| || |||||||||||||||||||||||||||    
T  42419889 aaacagtctcaaaaaacttatgtcagaagataaactcaaataagtcaatccaaa 42419942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 423834 - 423790
Alignment:
Q  271 ttatgcataagcttacgtaagttatttttatagaaaaagataaaa 315  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  423834 ttatgcataagcttccgcaagttatttttatagaaaaagataaaa 423790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 8017507 - 8017595
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaa-cttaggtcaatagataaactcaaatatgtcaatccaaacaaaccctgtat 166  Q
    ||||||||||||||||| | ||||||| || |||||   |||| |||||||||||| |||||||| ||||||||||||| ||| |||||    
T  8017507 agctgttttcataagttctcccaaataatcgcacaagtgcttatgtcaatagataacctcaaataagtcaatccaaacagaccttgtat 8017595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 439
Target Start/End: Original strand, 18179058 - 18179101
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  18179058 aaacttatgttagtagataagctcaaataagtcaatccaaacag 18179101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 2416422 - 2416464
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    |||||||||| |||||||||||||||||||||||||| |||||    
T  2416422 aaacttatgttagtagataaactcaaataagtcaatctaaaca 2416464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 10619229 - 10619139
Alignment:
Q  66 gaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||| ||  |||||||||||| |||| | ||||   ||||||||||||||  |||| |||||||||||||||  |||||||||||||    
T  10619229 gaaaattgacataagctgttttcatgagttctcccaaggggtctcacaaaacttgtgtcagtagataaactcaaatgagtcaatccaaaca 10619139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 23974631 - 23974585
Alignment:
Q  271 ttatgcataagcttacgtaagttatttttatagaaaaagataaaata 317  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||    
T  23974631 ttatgcataagcttacttaagctatttttatagaaaaagacaaaata 23974585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 27317456 - 27317530
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||||| |  |||| ||||||| |||||||| |||  ||||||| |||||||| |||||||||||||    
T  27317456 tgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatccaaaca 27317530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 440
Target Start/End: Original strand, 1830151 - 1830192
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||| |||| |||||||||||||||||||||||||||||    
T  1830151 cttatgtcagtaaataaactcaaataagtcaatccaaacagg 1830192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 3312177 - 3312234
Alignment:
Q  105 agtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    |||||||||||||||| |||| ||||||| |||||||| | |||||||||||| ||||    
T  3312177 agtctcacaaaacttacgtcagtagataagctcaaataagccaatccaaacaagccct 3312234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 27317475 - 27317532
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||||| |  ||||||||||  |||||||| ||||||||||||||||||||||||    
T  27317475 aaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatccaaacagg 27317532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 32592499 - 32592564
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataat 319  Q
    |||||||| ||| ||| ||||| |||||||| | |||  |||||||||||||||||||||||||||    
T  32592499 cttatcattataagcgcttatgtataagcttgcataaactatttttatagaaaaagataaaataat 32592564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 40059418 - 40059381
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaac 437  Q
    |||||| |||||||||||||||||||||||||||||||    
T  40059418 ttatgtcagtagataaactcaaataagtcaatccaaac 40059381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 40085318 - 40085281
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaac 437  Q
    |||||| |||||||||||||||||||||||||||||||    
T  40085318 ttatgtcagtagataaactcaaataagtcaatccaaac 40085281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 40279273 - 40279310
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaatt 72  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  40279273 ttgttttcataagctatattggagaacttatgaaaatt 40279310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 40279343 - 40279380
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaatt 72  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  40279343 ttgttttcataagctatattggagaacttatgaaaatt 40279380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 2142713 - 2142805
Alignment:
Q  64 atgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||| |||||||| |  |||||||||||||| | ||||| ||||||| |||||||| |    |||||||||||||||| ||||| |||||||    
T  2142713 atgaacattgtcacaacttgttttcataagttctcccaaacagtctcataaaacttatgcatgtagataaactcaaataagtcaaaccaaaca 2142805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 10619181 - 10619137
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||    
T  10619181 aaacttgtgtcagtagataaactcaaatgagtcaatccaaacagg 10619137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 20952361 - 20952397
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||| ||||||||||||||||||||||||||    
T  20952361 ttgtttttattagctatattggagaacttatgaaaat 20952397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 26202034 - 26202070
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26202034 ttgtttttataagatatattggagaacttatgaaaat 26202070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 32592592 - 32592628
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||| ||||||||||||||||||||||    
T  32592592 ttgtttttataagcaatattggagaacttatgaaaat 32592628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 40279413 - 40279449
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||| |||||||||||||||||||||||||||||    
T  40279413 ttgttttcataagctatattggagaacttatgaaaat 40279449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 41170723 - 41170763
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||| |||||||||||||||||||| |||||||||||||    
T  41170723 ttatgttagtagataaactcaaataagccaatccaaacagg 41170763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 42659309 - 42659245
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||||||| ||| ||||| |||||||||| |||| ||||||||| ||||| | ||||||||    
T  42659309 cttatcatgataagcgcttatgtataagcttacataagctatttttatggaaaatggtaaaataa 42659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 43036633 - 43036693
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaata 142  Q
    |||| ||||||||||| ||||||| |||||||||||||| || | ||||||| ||||||||    
T  43036633 tgttctcataagttttcccaaatactctcacaaaacttatgtaactagataagctcaaata 43036693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 43279593 - 43279557
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||||||||||||||| |||||||    
T  43279593 ttgtttttataagctatattggagaacttgtgaaaat 43279557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 438
Target Start/End: Original strand, 30331847 - 30331902
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||| |  |||||||||| ||||||||| || |||||||||||||||||||    
T  30331847 aaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaatccaaaca 30331902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 435
Target Start/End: Complemental strand, 31561703 - 31561664
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaa 435  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  31561703 aaacttatgttagtagataatctcaaataagtcaatccaa 31561664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 438
Target Start/End: Complemental strand, 37419617 - 37419586
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||||||||||||||||||||||||||    
T  37419617 agtagataaactcaaataagtcaatccaaaca 37419586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 39073690 - 39073615
Alignment:
Q  87 tcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    ||||||||| ||||||| |||||||||||| ||| |||  ||||| ||||||||||  |||||| ||||| |||||    
T  39073690 tcataagttcttccaaacagtctcacaaaaattatgtcggtagatgaactcaaataaatcaatctaaacataccct 39073615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 4607002 - 4607076
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||| ||||| | ||||||||||||||||||||||  |   ||||||| |||||||| | |||||||||||    
T  4607002 tgttttcacaagttctcccaaatagtctcacaaaacttatattggtagataagctcaaataagccaatccaaaca 4607076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 439
Target Start/End: Complemental strand, 7103421 - 7103391
Alignment:
Q  409 tagataaactcaaataagtcaatccaaacag 439  Q
    |||||||||||||||||||||||||||||||    
T  7103421 tagataaactcaaataagtcaatccaaacag 7103391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 7103426 - 7103392
Alignment:
Q  122 gtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||||||||| |||||||||||||    
T  7103426 gtcaatagataaactcaaataagtcaatccaaaca 7103392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 18179050 - 18179100
Alignment:
Q  106 gtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||| || | ||||||| |||||||| |||||||||||||    
T  18179050 gtctcacaaaacttatgttagtagataagctcaaataagtcaatccaaaca 18179100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 318
Target Start/End: Original strand, 41407191 - 41407277
Alignment:
Q  232 tttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||||||||| |  ||| |||||||||||| ||  ||||| |||||||||| |||| ||||| | ||  ||||||||||||||    
T  41407191 tttgcagcttatagcacaagcgcttatcatgataagcacttatgtataagcttacataagctatttctgtaccaaaagataaaataa 41407277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 44600632 - 44600674
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||||||||||  ||||||||||||||| |||||||||||    
T  44600632 aaacttatgtgagtgcataaactcaaataagccaatccaaaca 44600674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 440
Target Start/End: Complemental strand, 15370273 - 15370240
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||||| ||||||||||||||||||||||||    
T  15370273 agtagataagctcaaataagtcaatccaaacagg 15370240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 356
Target Start/End: Complemental strand, 23956092 - 23956059
Alignment:
Q  323 ttttataagctgtattgaagaacttatgaaaata 356  Q
    |||||||||||||||||||||| |||||||||||    
T  23956092 ttttataagctgtattgaagaatttatgaaaata 23956059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 33197207 - 33197174
Alignment:
Q  129 gataaactcaaatatgtcaatccaaacaaaccct 162  Q
    |||||||||||||| |||||||||||||||||||    
T  33197207 gataaactcaaataagtcaatccaaacaaaccct 33197174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 36534842 - 36534883
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaactta 120  Q
    ||||||||||||||||| | ||||| ||||||||||||||||    
T  36534842 agctgttttcataagttatcccaaacagtctcacaaaactta 36534883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 38010324 - 38010389
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataat 319  Q
    |||||||||||||||  ||| |  |||||||||||||||| ||| ||||  |||||||||||||||    
T  38010324 cttatcatgatatgcccttacgtctaagcttacgtaagttgtttctatattaaaagataaaataat 38010389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 39659573 - 39659540
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaa 68  Q
    |||||||||||||||||||| |||||||||||||    
T  39659573 ttgtttttataagctatattagagaacttatgaa 39659540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 40279203 - 40279240
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaatt 72  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  40279203 ttgttttcataagctatgttggagaacttatgaaaatt 40279240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 1633461 - 1633421
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaa 436  Q
    |||||||||  ||||||||||||||||||||| ||||||||    
T  1633461 aaacttatgctagtagataaactcaaataagtaaatccaaa 1633421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 439
Target Start/End: Original strand, 2142750 - 2142806
Alignment:
Q  383 aaacagtctgaagaaacttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||||| |  |||||||||   ||||||||||||||||||||||| ||||||||    
T  2142750 aaacagtctcataaaacttatgcatgtagataaactcaaataagtcaaaccaaacag 2142806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 397 - 449
Target Start/End: Complemental strand, 7928258 - 7928206
Alignment:
Q  397 aacttatgtgagtagataaactcaaataagtcaatccaaacagggccatagtg 449  Q
    ||||||||| | ||||||| |||||||||| ||||||||||||| || |||||    
T  7928258 aacttatgtcaatagataagctcaaataagccaatccaaacaggcccttagtg 7928206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 8017546 - 8017586
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||| | ||||||| |||||||||||||||||||||||    
T  8017546 cttatgtcaatagataacctcaaataagtcaatccaaacag 8017586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 12289803 - 12289839
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||  |||||||||||||||||||||||    
T  12289803 ttgtttttataatttatattggagaacttatgaaaat 12289839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 440
Target Start/End: Original strand, 15305783 - 15305827
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||| | ||||||| |||||||||| |||||||||||||    
T  15305783 aaacttatgtcaatagataagctcaaataagccaatccaaacagg 15305827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 20952414 - 20952506
Alignment:
Q  64 atgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||| ||  | ||||||||||||||| |   ||||||||| |||||||||  | || || |||| |||||||| |||||||||||||    
T  20952414 atgaaaattggcataaactgttttcataagttctcttaaatagtctaacaaaacttttgccagtatataagctcaaataagtcaatccaaaca 20952506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 23974448 - 23974412
Alignment:
Q  402 atgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  23974448 atgtcagtagataaacccaaataagtcaatccaaaca 23974412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 30990397 - 30990357
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||| ||||||||| |||||||||| ||||||||||||    
T  30990397 cttatgttagtagataagctcaaataagccaatccaaacag 30990357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 33197216 - 33197180
Alignment:
Q  402 atgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  33197216 atgtcagttgataaactcaaataagtcaatccaaaca 33197180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 40835542 - 40835570
Alignment:
Q  43 ataagctatattggagaacttatgaaaat 71  Q
    |||||||||||||||||||||||||||||    
T  40835542 ataagctatattggagaacttatgaaaat 40835570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 440
Target Start/End: Complemental strand, 43910958 - 43910930
Alignment:
Q  412 ataaactcaaataagtcaatccaaacagg 440  Q
    |||||||||||||||||||||||||||||    
T  43910958 ataaactcaaataagtcaatccaaacagg 43910930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 398 - 440
Target Start/End: Complemental strand, 30536924 - 30536882
Alignment:
Q  398 acttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  30536924 acttatgtaagtagataaactcaaataagtcaatccaaacagg 30536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 10645378 - 10645298
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    |||||||||||||| | ||||| ||||| |||||||||| |||| ||||||| |||||||  | ||||||||||| |||||    
T  10645378 tgttttcataagttctcccaaacagtcttacaaaacttatgtcattagataacctcaaattagccaatccaaacataccct 10645298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 658502 - 658463
Alignment:
Q  102 aatagtctcacaaaacttaggtcaatagataaactcaaat 141  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  658502 aatagtctcacaaaacttatgtcaatagataaactcaaat 658463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 848045 - 848139
Alignment:
Q  61 cttatgaaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||| ||||| |||||  ||| ||||| ||||||| ||||||| |||||||||||||||| | | |||||||| |||||||| | |||||||||||    
T  848045 cttaagaaaaatgtcataagcagtttttataagttcttccaaacagtctcacaaaacttatg-ctatagataagctcaaataaggcaatccaaaca 848139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 9911851 - 9911796
Alignment:
Q  107 tctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    |||||||||||||| | || ||||||||||||||||  ||||||||||||||||||    
T  9911851 tctcacaaaacttacgacattagataaactcaaataaatcaatccaaacaaaccct 9911796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 18076085 - 18076172
Alignment:
Q  231 atttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    ||||||||||||||| |  ||| |||||||| ||| ||  ||||| |||||||| | |||||||||||||||| |||||| |||||||    
T  18076085 atttgcagcttatagcacaagcgcttatcataataagcacttatgtataagcttgcataagttatttttatagcaaaagagaaaataa 18076172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 21405130 - 21405067
Alignment:
Q  99 ccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaacaaaccct 162  Q
    ||||||| |||||||||||||| |||| || |||| |||||||| ||||||||||||| |||||    
T  21405130 ccaaatattctcacaaaacttatgtcagtatataagctcaaataagtcaatccaaacagaccct 21405067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 31623489 - 31623534
Alignment:
Q  271 ttatgcataagcttacgtaagttatttttatagaaaaagataaaat 316  Q
    |||||||||||||||| | || ||||||||||||||||||||||||    
T  31623489 ttatgcataagcttacattagctatttttatagaaaaagataaaat 31623534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 35070765 - 35070724
Alignment:
Q  277 ataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||||| |||| ||||||||||||||||||||||||||    
T  35070765 ataagcttacataagctatttttatagaaaaagataaaataa 35070724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 8147615 - 8147678
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaaataa 318  Q
    |||||||||||| ||| ||| ||||||||| || |||| ||||||||||| ||||||||||||||    
T  8147615 cttatcatgataagcgcttaagcataagct-acataagctatttttatagcaaaagataaaataa 8147678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 34404717 - 34404645
Alignment:
Q  84 ttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    |||||||||||| | ||||| | || ||||||||||| |||| | |||||||||||||| || ||||||||||    
T  34404717 ttttcataagttctcccaaagactcacacaaaacttatgtcagttgataaactcaaataagtaaatccaaaca 34404645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 4308889 - 4308928
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  4308889 cttatgtcagtagataaactcaaataagccaatccaaaca 4308928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 439
Target Start/End: Complemental strand, 21405115 - 21405072
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||||| |||| |||| |||||||||||||||||||||||    
T  21405115 aaacttatgtcagtatataagctcaaataagtcaatccaaacag 21405072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 30641741 - 30641706
Alignment:
Q  171 cctatttcgataaatagcttatttgcagcttatagt 206  Q
    ||||||| ||||||||||||||||||||||||||||    
T  30641741 cctatttggataaatagcttatttgcagcttatagt 30641706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 30926578 - 30926625
Alignment:
Q  64 atgaaaattgtcacgagctgttttcataagtttttccaaatagtctca 111  Q
    |||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  30926578 atgaaaattgtcataagctgttttcataagttcttccaaacagtctca 30926625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 439
Target Start/End: Complemental strand, 34404687 - 34404644
Alignment:
Q  396 aaacttatgtgagtagataaactcaaataagtcaatccaaacag 439  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||    
T  34404687 aaacttatgtcagttgataaactcaaataagtaaatccaaacag 34404644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 6538406 - 6538488
Alignment:
Q  231 atttgcagcttatagtaagagctcttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataa 313  Q
    ||||||||||||||| |  ||| ||||| |||||| ||| ||||| |||||||| | ||||||| |||| ||| |||||||||    
T  6538406 atttgcagcttatagcacaagcacttataatgataagcgcttatgtataagcttgcataagttagttttttagcaaaagataa 6538488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 9604902 - 9604944
Alignment:
Q  398 acttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||||||||||||||  ||||||||||||||| |||||||    
T  9604902 acttatgtgagtagataaggtcaaataagtcaatcgaaacagg 9604944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 438
Target Start/End: Complemental strand, 31594334 - 31594296
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaaca 438  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  31594334 ttatgtaagtagataaacacaaataagtcaatccaaaca 31594296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 33089579 - 33089657
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaa-acttaggtcaatagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||||| |   ||||||||||||||| || || |||| ||||||| |||||||| ||||| |||||||    
T  33089579 agctgttttcataagttctctgaaatagtctcacaaatacatatgtcagtagataagctcaaataagtcaacccaaaca 33089657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 160971 - 160918
Alignment:
Q  67 aaaattgtcacgagctgttttcataagtttttccaaatagtctcacaaaactta 120  Q
    ||||||||||  |||||||||| || ||| ||||||||||||| ||||||||||    
T  160971 aaaattgtcataagctgttttcgtatgttcttccaaatagtctaacaaaactta 160918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 1498089 - 1498126
Alignment:
Q  123 tcaatagataaactcaaatatgtcaatccaaacaaacc 160  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  1498089 tcaatagataaactcaaataagtcaatcgaaacaaacc 1498126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Complemental strand, 7785702 - 7785661
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    ||||||| |||||||||| ||||||||| |||||||||||||    
T  7785702 cttatgtcagtagataaattcaaataagacaatccaaacagg 7785661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 26559233 - 26559160
Alignment:
Q  82 tgttttcataagtttttccaaatagtctcacaaa-acttaggtcaatagataaactcaaatatgtcaatccaaa 154  Q
    |||||||||||||| ||||||| |||||||||||  |||| | || ||| |||||||||||| || ||||||||    
T  26559233 tgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaa 26559160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 29660188 - 29660143
Alignment:
Q  271 ttatgcataagcttacgtaagttatttttatagaaaaagataaaat 316  Q
    ||||| ||||||||||||||| ||||| ||| ||||||||||||||    
T  29660188 ttatgtataagcttacgtaagctatttctattgaaaaagataaaat 29660143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 31811672 - 31811643
Alignment:
Q  127 tagataaactcaaatatgtcaatccaaaca 156  Q
    ||||||||||||||||||||||||||||||    
T  31811672 tagataaactcaaatatgtcaatccaaaca 31811643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 4325262 - 4325222
Alignment:
Q  400 ttatgtgagtagataaactcaaataagtcaatccaaacagg 440  Q
    |||||| |||||||||||| |||| ||||||||||||||||    
T  4325262 ttatgttagtagataaactaaaattagtcaatccaaacagg 4325222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 6536621 - 6536657
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  6536621 ttgtttttagaagctatattggagaatttatgaaaat 6536657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 6538384 - 6538420
Alignment:
Q  169 ggcctatttcgataaatagcttatttgcagcttatag 205  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  6538384 ggcctgtttggataaatagcttatttgcagcttatag 6538420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 6538518 - 6538554
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  6538518 ttgtttttataggctatattggagaacttattaaaat 6538554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 7351629 - 7351597
Alignment:
Q  399 cttatgtgagtagataaactcaaataagtcaat 431  Q
    ||||||| |||||||||||||||||||||||||    
T  7351629 cttatgtcagtagataaactcaaataagtcaat 7351597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 8201239 - 8201275
Alignment:
Q  35 ttgtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  8201239 ttgtttttataagttatgttggagaacttatgaaaat 8201275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 439
Target Start/End: Complemental strand, 9202935 - 9202903
Alignment:
Q  407 agtagataaactcaaataagtcaatccaaacag 439  Q
    ||||||||| |||||||||||||||||||||||    
T  9202935 agtagataagctcaaataagtcaatccaaacag 9202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 9559418 - 9559358
Alignment:
Q  79 agctgttttcataagtttttccaaatagtctcacaaaacttaggtcaatagataaactcaa 139  Q
    |||||||||||||| || | | ||| |||||||||||||||| | |||||||||| |||||    
T  9559418 agctgttttcataacttctcctaaacagtctcacaaaacttatgccaatagataatctcaa 9559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 30926450 - 30926510
Alignment:
Q  254 cttatcatgatatgcgattatgcataagcttacgtaagttatttttatagaaaaagataaa 314  Q
    |||||||||||| || |||| | |||||||||| |||| ||||| ||||| ||||||||||    
T  30926450 cttatcatgataagcaattaagtataagcttacataagctatttctatagtaaaagataaa 30926510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 31813240 - 31813276
Alignment:
Q  84 ttttcataagtttttccaaatagtctcacaaaactta 120  Q
    |||||||||||| | ||||||||||||||||||||||    
T  31813240 ttttcataagttctcccaaatagtctcacaaaactta 31813276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 23639 - 23673
Alignment:
Q  37 gtttttataagctatattggagaacttatgaaaat 71  Q
    ||||||||||||||||||||||||||| |||||||    
T  23639 gtttttataagctatattggagaacttgtgaaaat 23673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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