View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3926_high_2 (Length: 440)
Name: NF3926_high_2
Description: NF3926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3926_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 39 - 425
Target Start/End: Original strand, 45758749 - 45759134
Alignment:
| Q |
39 |
gtgagtcatgatttattttgatcttttttcatcgttttaagagtttcggtaaggatcattggcatgagaaatcaaatgcagatatttaagcaaccccaag |
138 |
Q |
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| T |
45758749 |
gtgagtcatgatttattttgatcttttttcatcattttaagagtttgggtaaggatcattggcatgagaaatcaaatgcagatatttaagcaacctcaag |
45758848 |
T |
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| Q |
139 |
agttaaactttgtgctctaaactctaaattggaaatcctaacgcatacatgcaaaaacaatttccactctgcaatattcaaagatgatcccaagttcaca |
238 |
Q |
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| T |
45758849 |
agttaaactttgtgctctaaactctaaattggaaatcctaacgcatacatgcaaaaacaatttccaccctgcaatattcaaagatgatcccaagttcaca |
45758948 |
T |
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| Q |
239 |
acctcaataacaatctaataaatctaacaataaaaactaacaacgaggtattaacaaggtgaaaaaagtagatgaaccattatgagataccaactgatta |
338 |
Q |
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| T |
45758949 |
acctcaataac-atttaataaatctaacaaaaaaaactaacaacgaggtattaacaaggggaaaaaagtagatgaaccattatgagataccaactgatta |
45759047 |
T |
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| Q |
339 |
tgatagtaattaacatgcatatttcttgttatatagtgaagatgttactgaatacacagtccatagtacaaaattgacattgttcat |
425 |
Q |
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| T |
45759048 |
tgatagtaattaacatgcatatttcttgttatatagtgaagatgttactgaatacacagtccatagtacaaaattgacattgttcat |
45759134 |
T |
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