View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3929_high_14 (Length: 549)

Name: NF3929_high_14
Description: NF3929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3929_high_14
NF3929_high_14
[»] chr5 (65 HSPs)
chr5 (127-531)||(26209481-26209884)
chr5 (1-191)||(8820718-8820909)
chr5 (126-190)||(29116997-29117061)
chr5 (127-190)||(35135730-35135793)
chr5 (112-178)||(7853609-7853675)
chr5 (1-111)||(28586687-28586797)
chr5 (157-202)||(18704133-18704178)
chr5 (130-190)||(9927524-9927584)
chr5 (10-176)||(11457074-11457238)
chr5 (153-213)||(20982229-20982289)
chr5 (127-191)||(29588818-29588881)
chr5 (3-95)||(32172708-32172800)
chr5 (126-189)||(985573-985636)
chr5 (127-178)||(14295457-14295508)
chr5 (153-191)||(7096221-7096259)
chr5 (153-191)||(13224367-13224405)
chr5 (153-191)||(33459029-33459067)
chr5 (153-191)||(34117627-34117665)
chr5 (131-213)||(37063146-37063228)
chr5 (12-191)||(37611147-37611323)
chr5 (12-191)||(37787877-37788053)
chr5 (143-205)||(39128563-39128625)
chr5 (153-191)||(40048374-40048412)
chr5 (130-191)||(9202819-9202880)
chr5 (127-211)||(11684341-11684423)
chr5 (153-190)||(12407755-12407792)
chr5 (153-190)||(12460094-12460131)
chr5 (127-176)||(12595808-12595857)
chr5 (11-96)||(38047810-38047895)
chr5 (155-191)||(1773521-1773557)
chr5 (153-213)||(26516214-26516274)
chr5 (127-183)||(32969185-32969241)
chr5 (128-191)||(39823190-39823254)
chr5 (136-183)||(10363696-10363743)
chr5 (144-191)||(31208411-31208458)
chr5 (128-191)||(37968829-37968892)
chr5 (154-189)||(40097498-40097533)
chr5 (138-189)||(42583089-42583140)
chr5 (129-191)||(465892-465954)
chr5 (157-191)||(8089241-8089275)
chr5 (136-178)||(10303752-10303794)
chr5 (153-191)||(11054124-11054162)
chr5 (153-191)||(27106017-27106055)
chr5 (132-178)||(28586839-28586885)
chr5 (153-191)||(34690812-34690850)
chr5 (127-189)||(36796774-36796836)
chr5 (131-185)||(43215323-43215376)
chr5 (130-190)||(912719-912780)
chr5 (130-191)||(7674586-7674647)
chr5 (127-191)||(16945051-16945113)
chr5 (130-187)||(29158571-29158627)
chr5 (157-190)||(38033907-38033940)
chr5 (133-190)||(38047929-38047986)
chr5 (153-189)||(4014518-4014554)
chr5 (127-191)||(5377268-5377332)
chr5 (153-185)||(5563648-5563680)
chr5 (128-184)||(9703309-9703365)
chr5 (129-185)||(11615452-11615508)
chr5 (127-191)||(12425509-12425573)
chr5 (153-213)||(19113211-19113271)
chr5 (127-191)||(32172591-32172655)
chr5 (127-191)||(34112813-34112877)
chr5 (115-191)||(37112314-37112390)
chr5 (153-185)||(41981802-41981834)
chr5 (127-191)||(42569048-42569112)
[»] chr3 (77 HSPs)
chr3 (266-515)||(33531681-33531930)
chr3 (11-135)||(37273148-37273273)
chr3 (87-185)||(49586943-49587042)
chr3 (70-191)||(16790369-16790488)
chr3 (127-189)||(1395611-1395673)
chr3 (131-184)||(10101548-10101601)
chr3 (131-184)||(10212473-10212526)
chr3 (129-188)||(42809242-42809301)
chr3 (127-189)||(22214749-22214811)
chr3 (136-190)||(48364956-48365010)
chr3 (1-83)||(49845461-49845543)
chr3 (131-184)||(10357378-10357431)
chr3 (132-184)||(15304420-15304472)
chr3 (144-188)||(33882969-33883013)
chr3 (143-190)||(2128335-2128382)
chr3 (153-212)||(25964359-25964418)
chr3 (127-190)||(32703077-32703140)
chr3 (129-191)||(905040-905102)
chr3 (153-191)||(16790182-16790220)
chr3 (153-191)||(20173982-20174020)
chr3 (127-189)||(42084319-42084381)
chr3 (153-190)||(24605110-24605147)
chr3 (155-188)||(36887463-36887496)
chr3 (127-208)||(41028919-41029000)
chr3 (135-208)||(44374720-44374793)
chr3 (1-66)||(45590735-45590800)
chr3 (127-188)||(48397587-48397648)
chr3 (127-191)||(8007763-8007827)
chr3 (127-191)||(20192674-20192738)
chr3 (1-93)||(21872216-21872308)
chr3 (127-191)||(25129768-25129832)
chr3 (127-187)||(29771751-29771811)
chr3 (153-213)||(36445648-36445708)
chr3 (127-190)||(36783402-36783466)
chr3 (135-191)||(40122828-40122884)
chr3 (129-185)||(42808923-42808979)
chr3 (127-187)||(44061091-44061151)
chr3 (122-202)||(51278220-51278300)
chr3 (49-175)||(52323863-52323990)
chr3 (131-191)||(53736185-53736245)
chr3 (135-190)||(3182438-3182493)
chr3 (130-201)||(23793517-23793587)
chr3 (127-190)||(38462220-38462283)
chr3 (87-188)||(44284087-44284187)
chr3 (1-79)||(24158437-24158515)
chr3 (153-187)||(24235777-24235811)
chr3 (129-191)||(27792810-27792872)
chr3 (155-185)||(32095287-32095317)
chr3 (131-185)||(36646454-36646508)
chr3 (153-191)||(39971257-39971295)
chr3 (153-191)||(41159047-41159085)
chr3 (153-183)||(54775074-54775104)
chr3 (1-38)||(584158-584195)
chr3 (131-188)||(22232767-22232824)
chr3 (158-191)||(23815991-23816024)
chr3 (128-185)||(24887352-24887409)
chr3 (133-178)||(26990685-26990730)
chr3 (153-190)||(30669064-30669101)
chr3 (157-190)||(32663581-32663614)
chr3 (127-184)||(34363950-34364007)
chr3 (127-184)||(37689452-37689509)
chr3 (153-190)||(37788800-37788836)
chr3 (133-190)||(51455852-51455908)
chr3 (154-190)||(2304336-2304372)
chr3 (44-135)||(8933801-8933893)
chr3 (127-187)||(12923393-12923453)
chr3 (153-185)||(20143869-20143901)
chr3 (113-185)||(21131540-21131612)
chr3 (49-135)||(21367681-21367769)
chr3 (127-186)||(21862243-21862303)
chr3 (153-185)||(23269288-23269320)
chr3 (127-191)||(23785193-23785257)
chr3 (155-183)||(23952202-23952230)
chr3 (164-212)||(24158607-24158655)
chr3 (12-104)||(31010448-31010540)
chr3 (154-190)||(39743844-39743880)
chr3 (153-193)||(41155132-41155172)
[»] chr4 (68 HSPs)
chr4 (127-191)||(30024638-30024702)
chr4 (127-191)||(6364087-6364151)
chr4 (127-186)||(49219082-49219141)
chr4 (113-191)||(25487599-25487677)
chr4 (1-83)||(27123273-27123355)
chr4 (86-194)||(5131256-5131367)
chr4 (1-93)||(6987662-6987754)
chr4 (127-191)||(30338660-30338724)
chr4 (127-178)||(4071833-4071884)
chr4 (153-212)||(19422335-19422394)
chr4 (1-92)||(25896842-25896933)
chr4 (127-190)||(26883934-26883997)
chr4 (127-190)||(44119230-44119293)
chr4 (127-190)||(51098254-51098317)
chr4 (44-187)||(21043199-21043342)
chr4 (129-187)||(22684586-22684644)
chr4 (153-191)||(28623227-28623265)
chr4 (131-189)||(49803151-49803209)
chr4 (128-186)||(54327518-54327576)
chr4 (153-190)||(3176216-3176253)
chr4 (127-184)||(19154691-19154748)
chr4 (153-190)||(24936249-24936286)
chr4 (126-191)||(44007939-44008004)
chr4 (153-190)||(51044553-51044590)
chr4 (127-191)||(8130112-8130176)
chr4 (127-202)||(8422907-8422980)
chr4 (136-188)||(23815311-23815363)
chr4 (127-191)||(27043898-27043962)
chr4 (127-191)||(29373955-29374019)
chr4 (127-179)||(47119033-47119085)
chr4 (127-191)||(47946136-47946200)
chr4 (155-191)||(47970256-47970292)
chr4 (131-183)||(52735068-52735120)
chr4 (127-187)||(54325105-54325165)
chr4 (156-191)||(4191677-4191712)
chr4 (153-188)||(35743245-35743280)
chr4 (155-190)||(52645845-52645880)
chr4 (135-190)||(54986361-54986415)
chr4 (143-189)||(3155543-3155589)
chr4 (153-191)||(4798653-4798691)
chr4 (133-191)||(9680602-9680660)
chr4 (126-188)||(17884009-17884071)
chr4 (53-111)||(21952987-21953045)
chr4 (128-190)||(35958594-35958656)
chr4 (133-191)||(44138497-44138555)
chr4 (156-190)||(44249225-44249259)
chr4 (127-186)||(53626717-53626778)
chr4 (46-111)||(4684071-4684136)
chr4 (47-112)||(6978929-6978994)
chr4 (127-184)||(21952906-21952963)
chr4 (1-90)||(25717653-25717742)
chr4 (131-188)||(31038939-31038996)
chr4 (129-178)||(41701511-41701560)
chr4 (153-190)||(42641727-42641764)
chr4 (135-176)||(52294042-52294083)
chr4 (137-185)||(1404366-1404414)
chr4 (155-191)||(4663792-4663828)
chr4 (127-191)||(11389464-11389528)
chr4 (127-191)||(18630618-18630682)
chr4 (44-96)||(19429476-19429528)
chr4 (146-190)||(20907112-20907156)
chr4 (155-191)||(24160928-24160964)
chr4 (127-191)||(25885797-25885861)
chr4 (127-191)||(26520297-26520361)
chr4 (49-93)||(27725271-27725315)
chr4 (127-191)||(30207639-30207702)
chr4 (155-191)||(45128406-45128442)
chr4 (2-66)||(46860002-46860066)
[»] chr7 (64 HSPs)
chr7 (1-190)||(3836604-3836791)
chr7 (59-212)||(39539760-39539914)
chr7 (129-213)||(27121656-27121740)
chr7 (127-190)||(48157188-48157251)
chr7 (131-185)||(39591539-39591593)
chr7 (153-193)||(1432061-1432101)
chr7 (127-191)||(28165029-28165093)
chr7 (131-191)||(35536045-35536105)
chr7 (127-190)||(23918896-23918959)
chr7 (129-191)||(33894561-33894622)
chr7 (130-190)||(1417203-1417263)
chr7 (127-190)||(49060479-49060542)
chr7 (131-189)||(5006581-5006639)
chr7 (128-190)||(22759125-22759187)
chr7 (113-191)||(42656453-42656531)
chr7 (163-200)||(3279656-3279693)
chr7 (135-188)||(28178910-28178963)
chr7 (126-191)||(31341132-31341197)
chr7 (126-187)||(31908377-31908438)
chr7 (127-187)||(43152969-43153030)
chr7 (155-191)||(2013137-2013173)
chr7 (89-191)||(7244640-7244741)
chr7 (1-93)||(8427070-8427162)
chr7 (1-109)||(23214896-23215004)
chr7 (154-190)||(35808999-35809035)
chr7 (153-189)||(44241800-44241836)
chr7 (131-191)||(45593791-45593851)
chr7 (127-191)||(45813248-45813312)
chr7 (129-202)||(47046178-47046255)
chr7 (153-188)||(3968289-3968324)
chr7 (153-212)||(5373142-5373201)
chr7 (154-213)||(6552365-6552424)
chr7 (127-178)||(12835005-12835056)
chr7 (143-190)||(21853200-21853247)
chr7 (153-188)||(25600691-25600726)
chr7 (131-178)||(30456522-30456569)
chr7 (127-190)||(30496643-30496706)
chr7 (127-186)||(39551616-39551675)
chr7 (127-178)||(40689054-40689105)
chr7 (129-184)||(43318598-43318653)
chr7 (44-111)||(48157084-48157151)
chr7 (128-190)||(2012683-2012745)
chr7 (128-190)||(2030648-2030710)
chr7 (128-190)||(5272889-5272951)
chr7 (127-188)||(7453465-7453527)
chr7 (153-191)||(24973882-24973920)
chr7 (156-190)||(28702699-28702733)
chr7 (1-83)||(39542221-39542303)
chr7 (131-188)||(1418372-1418429)
chr7 (157-190)||(2223087-2223120)
chr7 (127-184)||(4572543-4572600)
chr7 (153-190)||(4591481-4591518)
chr7 (129-190)||(30133988-30134049)
chr7 (153-190)||(35007543-35007580)
chr7 (130-175)||(46825052-46825097)
chr7 (124-188)||(389767-389831)
chr7 (153-217)||(991982-992046)
chr7 (127-191)||(2767246-2767310)
chr7 (155-191)||(3610836-3610872)
chr7 (153-189)||(7623078-7623114)
chr7 (127-179)||(30180001-30180053)
chr7 (155-191)||(30535501-30535537)
chr7 (91-190)||(43250710-43250810)
chr7 (127-187)||(47177578-47177638)
[»] chr2 (60 HSPs)
chr2 (1-134)||(15120198-15120332)
chr2 (131-212)||(3673724-3673805)
chr2 (128-213)||(28803575-28803660)
chr2 (127-191)||(10143110-10143174)
chr2 (135-190)||(10150694-10150749)
chr2 (153-198)||(5133703-5133748)
chr2 (127-191)||(2416251-2416315)
chr2 (127-191)||(11344352-11344416)
chr2 (127-191)||(18962106-18962170)
chr2 (146-185)||(1939419-1939458)
chr2 (128-191)||(17952770-17952833)
chr2 (133-188)||(40837502-40837557)
chr2 (1-83)||(9996805-9996887)
chr2 (127-190)||(11513840-11513900)
chr2 (132-205)||(13630354-13630427)
chr2 (153-190)||(24141743-24141780)
chr2 (11-92)||(25609854-25609935)
chr2 (143-191)||(3611164-3611212)
chr2 (127-191)||(4550715-4550779)
chr2 (153-189)||(15173466-15173502)
chr2 (11-83)||(16503420-16503492)
chr2 (127-191)||(25609734-25609798)
chr2 (135-191)||(32098384-32098440)
chr2 (143-187)||(39567845-39567889)
chr2 (127-187)||(43199356-43199416)
chr2 (127-190)||(3423836-3423899)
chr2 (129-188)||(3458598-3458657)
chr2 (1-96)||(28803451-28803546)
chr2 (128-187)||(35459852-35459911)
chr2 (155-190)||(38239647-38239682)
chr2 (135-190)||(40672872-40672927)
chr2 (156-191)||(41033047-41033082)
chr2 (1-83)||(22878165-22878247)
chr2 (135-185)||(29633016-29633066)
chr2 (144-190)||(31461377-31461423)
chr2 (129-191)||(32364794-32364856)
chr2 (49-111)||(32821848-32821910)
chr2 (153-191)||(33576688-33576726)
chr2 (153-191)||(34054995-34055033)
chr2 (1-38)||(1633421-1633458)
chr2 (1-38)||(5043481-5043518)
chr2 (153-190)||(5045251-5045288)
chr2 (1-66)||(6547973-6548038)
chr2 (154-191)||(8820368-8820405)
chr2 (153-190)||(13864589-13864626)
chr2 (154-191)||(29628837-29628874)
chr2 (127-192)||(29935940-29936005)
chr2 (127-191)||(31740027-31740092)
chr2 (153-190)||(32694151-32694188)
chr2 (156-189)||(41022176-41022209)
chr2 (129-191)||(44600477-44600541)
chr2 (129-185)||(656847-656903)
chr2 (153-193)||(5903237-5903277)
chr2 (124-191)||(11393430-11393498)
chr2 (124-191)||(11410091-11410159)
chr2 (127-183)||(14209223-14209279)
chr2 (127-191)||(28902015-28902079)
chr2 (3-83)||(39622018-39622098)
chr2 (127-191)||(41039719-41039778)
chr2 (143-191)||(42420378-42420426)
[»] chr6 (61 HSPs)
chr6 (114-191)||(507158-507235)
chr6 (127-191)||(29274297-29274361)
chr6 (127-190)||(24836267-24836330)
chr6 (1-83)||(2460072-2460154)
chr6 (127-193)||(22742302-22742368)
chr6 (153-191)||(33068655-33068693)
chr6 (127-187)||(2206532-2206592)
chr6 (127-191)||(4006652-4006716)
chr6 (127-191)||(9093624-9093688)
chr6 (155-190)||(5554861-5554896)
chr6 (127-185)||(281916-281974)
chr6 (153-191)||(9559635-9559673)
chr6 (153-187)||(31672012-31672046)
chr6 (10-96)||(32917251-32917337)
chr6 (129-190)||(20671935-20671996)
chr6 (142-191)||(33736776-33736825)
chr6 (157-190)||(34544548-34544581)
chr6 (127-183)||(1402942-1402998)
chr6 (127-191)||(10452428-10452492)
chr6 (48-135)||(10616509-10616597)
chr6 (127-191)||(21959666-21959730)
chr6 (127-187)||(31624200-31624260)
chr6 (156-191)||(4247731-4247766)
chr6 (1-96)||(7148720-7148815)
chr6 (135-186)||(10728575-10728626)
chr6 (131-190)||(10749300-10749358)
chr6 (154-193)||(12631548-12631587)
chr6 (156-191)||(31461616-31461651)
chr6 (131-190)||(33787817-33787876)
chr6 (153-191)||(2514640-2514678)
chr6 (143-213)||(4248874-4248944)
chr6 (153-183)||(5328920-5328950)
chr6 (129-191)||(7713963-7714025)
chr6 (50-112)||(9027616-9027678)
chr6 (157-191)||(10836759-10836793)
chr6 (153-191)||(27889937-27889975)
chr6 (153-187)||(28531635-28531669)
chr6 (129-191)||(29940734-29940796)
chr6 (156-190)||(33116544-33116578)
chr6 (154-191)||(1344235-1344272)
chr6 (113-185)||(2205624-2205694)
chr6 (153-190)||(4420556-4420593)
chr6 (158-191)||(6647327-6647360)
chr6 (131-172)||(9582670-9582711)
chr6 (1-38)||(12111079-12111116)
chr6 (130-191)||(24476540-24476601)
chr6 (131-184)||(24782004-24782057)
chr6 (1-38)||(32205934-32205971)
chr6 (153-190)||(32975917-32975954)
chr6 (157-218)||(33259727-33259788)
chr6 (154-191)||(33416323-33416360)
chr6 (157-190)||(33500579-33500612)
chr6 (153-190)||(34429784-34429821)
chr6 (155-191)||(6654553-6654589)
chr6 (153-213)||(7354120-7354180)
chr6 (131-187)||(8349736-8349792)
chr6 (127-191)||(11340693-11340757)
chr6 (153-189)||(20370839-20370875)
chr6 (44-96)||(27857412-27857464)
chr6 (155-191)||(31668781-31668817)
chr6 (1-61)||(35070388-35070448)
[»] scaffold0024 (2 HSPs)
scaffold0024 (127-191)||(27514-27578)
scaffold0024 (129-191)||(21348-21410)
[»] chr1 (88 HSPs)
chr1 (127-187)||(49517012-49517072)
chr1 (127-190)||(15360833-15360896)
chr1 (127-188)||(45999356-45999417)
chr1 (127-190)||(4200168-4200231)
chr1 (130-205)||(17269174-17269249)
chr1 (135-213)||(7274015-7274093)
chr1 (144-202)||(36641802-36641860)
chr1 (129-190)||(27140424-27140485)
chr1 (135-183)||(14737781-14737829)
chr1 (127-191)||(34619446-34619510)
chr1 (127-187)||(49557083-49557143)
chr1 (135-191)||(50319230-50319286)
chr1 (49-135)||(12564468-12564555)
chr1 (122-213)||(29793986-29794076)
chr1 (127-178)||(31517808-31517859)
chr1 (131-190)||(36151577-36151636)
chr1 (127-190)||(44032067-44032130)
chr1 (127-190)||(48830144-48830207)
chr1 (2-112)||(10199330-10199440)
chr1 (131-185)||(11211062-11211116)
chr1 (1-82)||(5157140-5157221)
chr1 (127-188)||(9572176-9572237)
chr1 (22-111)||(15579521-15579610)
chr1 (153-190)||(23895275-23895312)
chr1 (127-176)||(27738248-27738297)
chr1 (127-188)||(45990126-45990187)
chr1 (122-202)||(48748648-48748725)
chr1 (122-182)||(1879090-1879150)
chr1 (143-191)||(4549804-4549852)
chr1 (127-191)||(23544708-23544772)
chr1 (127-191)||(29007784-29007848)
chr1 (127-191)||(30259555-30259619)
chr1 (127-191)||(41163072-41163136)
chr1 (127-191)||(44936658-44936722)
chr1 (127-191)||(50998490-50998554)
chr1 (153-192)||(172671-172710)
chr1 (127-190)||(4256110-4256173)
chr1 (127-186)||(6074417-6074476)
chr1 (157-212)||(13037781-13037836)
chr1 (128-191)||(15687142-15687205)
chr1 (143-190)||(16982020-16982067)
chr1 (127-178)||(18434546-18434597)
chr1 (127-178)||(26630414-26630465)
chr1 (156-191)||(37818402-37818437)
chr1 (109-191)||(38651461-38651541)
chr1 (127-178)||(39777614-39777665)
chr1 (153-191)||(172279-172317)
chr1 (11-93)||(1662630-1662712)
chr1 (157-191)||(4202227-4202261)
chr1 (153-191)||(4700160-4700198)
chr1 (153-191)||(6976886-6976924)
chr1 (127-185)||(25479525-25479583)
chr1 (1-83)||(28467500-28467582)
chr1 (74-190)||(37593678-37593800)
chr1 (153-191)||(42169636-42169674)
chr1 (127-213)||(43372027-43372113)
chr1 (153-191)||(45769837-45769875)
chr1 (129-191)||(46499924-46499986)
chr1 (153-186)||(4777379-4777412)
chr1 (1-66)||(6659764-6659829)
chr1 (1-66)||(9507315-9507380)
chr1 (22-83)||(15709916-15709977)
chr1 (130-191)||(23370369-23370430)
chr1 (162-191)||(24146362-24146391)
chr1 (153-190)||(25707099-25707136)
chr1 (49-141)||(28689421-28689514)
chr1 (127-172)||(30371105-30371150)
chr1 (11-112)||(31517671-31517772)
chr1 (143-188)||(39803970-39804015)
chr1 (131-212)||(40304126-40304207)
chr1 (136-189)||(40357963-40358016)
chr1 (127-188)||(42556699-42556760)
chr1 (127-188)||(43333640-43333701)
chr1 (153-190)||(49692144-49692181)
chr1 (127-191)||(3062939-3063002)
chr1 (154-190)||(7707158-7707194)
chr1 (127-179)||(9656600-9656652)
chr1 (153-185)||(9777827-9777859)
chr1 (127-190)||(17423006-17423070)
chr1 (128-172)||(28467376-28467420)
chr1 (127-191)||(29793720-29793784)
chr1 (154-190)||(31294616-31294652)
chr1 (127-191)||(33527215-33527279)
chr1 (127-187)||(38578469-38578529)
chr1 (127-191)||(43722383-43722447)
chr1 (49-136)||(44422712-44422800)
chr1 (127-179)||(47877072-47877124)
chr1 (127-191)||(52286616-52286680)
[»] chr8 (58 HSPs)
chr8 (44-193)||(14949824-14949972)
chr8 (1-111)||(4055537-4055647)
chr8 (127-188)||(1470924-1470985)
chr8 (127-191)||(1112791-1112855)
chr8 (127-191)||(42597339-42597403)
chr8 (127-191)||(12361130-12361194)
chr8 (150-190)||(32506996-32507036)
chr8 (127-190)||(4558737-4558800)
chr8 (143-210)||(14482121-14482188)
chr8 (86-148)||(39866740-39866803)
chr8 (153-191)||(11188249-11188287)
chr8 (125-191)||(14280467-14280533)
chr8 (153-191)||(26215434-26215472)
chr8 (153-191)||(29699192-29699230)
chr8 (127-189)||(31884534-31884596)
chr8 (129-191)||(37444485-37444547)
chr8 (135-185)||(40280281-40280331)
chr8 (157-190)||(9928195-9928228)
chr8 (153-190)||(10939346-10939383)
chr8 (153-186)||(26820142-26820175)
chr8 (127-172)||(42237490-42237535)
chr8 (127-187)||(3537099-3537159)
chr8 (1-112)||(9700039-9700150)
chr8 (131-191)||(13652153-13652213)
chr8 (131-191)||(13710796-13710856)
chr8 (1-191)||(33553200-33553389)
chr8 (128-191)||(7514516-7514579)
chr8 (135-190)||(31915345-31915400)
chr8 (127-178)||(35374441-35374492)
chr8 (153-184)||(40728512-40728543)
chr8 (157-191)||(1561217-1561251)
chr8 (153-191)||(1929989-1930027)
chr8 (124-190)||(2364538-2364604)
chr8 (143-185)||(6526267-6526309)
chr8 (153-191)||(7714180-7714218)
chr8 (132-190)||(9699940-9699998)
chr8 (153-191)||(10114428-10114466)
chr8 (127-185)||(11000629-11000687)
chr8 (153-191)||(11119093-11119131)
chr8 (153-191)||(12224993-12225031)
chr8 (153-211)||(18356237-18356295)
chr8 (76-172)||(20672729-20672824)
chr8 (14-72)||(24326109-24326167)
chr8 (1-83)||(40071816-40071898)
chr8 (153-190)||(3945213-3945250)
chr8 (131-172)||(7026688-7026729)
chr8 (127-188)||(16210954-16211015)
chr8 (1-38)||(18331826-18331863)
chr8 (1-38)||(43368621-43368658)
chr8 (10-66)||(1664453-1664509)
chr8 (127-191)||(3936787-3936851)
chr8 (12-80)||(7918713-7918781)
chr8 (127-187)||(8908992-8909052)
chr8 (11-83)||(30191072-30191144)
chr8 (157-185)||(33522430-33522458)
chr8 (127-191)||(34770830-34770894)
chr8 (153-185)||(38561670-38561702)
chr8 (153-189)||(39392755-39392791)
[»] scaffold0103 (1 HSPs)
scaffold0103 (134-189)||(51508-51563)
[»] scaffold0590 (1 HSPs)
scaffold0590 (153-191)||(1168-1206)
[»] scaffold0508 (1 HSPs)
scaffold0508 (131-213)||(9847-9929)
[»] scaffold0275 (1 HSPs)
scaffold0275 (153-191)||(2769-2807)
[»] scaffold0019 (1 HSPs)
scaffold0019 (153-191)||(104228-104266)
[»] scaffold0221 (1 HSPs)
scaffold0221 (132-189)||(20235-20292)
[»] scaffold0100 (2 HSPs)
scaffold0100 (154-191)||(42555-42592)
scaffold0100 (1-82)||(42677-42757)
[»] scaffold0045 (1 HSPs)
scaffold0045 (131-184)||(84201-84254)
[»] scaffold0549 (2 HSPs)
scaffold0549 (127-191)||(1792-1856)
scaffold0549 (127-191)||(3882-3946)
[»] scaffold0199 (1 HSPs)
scaffold0199 (10-66)||(6894-6950)


Alignment Details
Target: chr5 (Bit Score: 331; Significance: 0; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 127 - 531
Target Start/End: Original strand, 26209481 - 26209884
Alignment:
Q  127 atagcttatat-gaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttatattatcacaacc 225  Q
    ||||||||||| |||| |||||  || ||||||||||||  ||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||    
T  26209481 atagcttatattgaaaacaattggactttattttatctt--gttatagaaataacttatacataagcaaatatgtgataagcacttatattatcaaaacc 26209578  T
Q  226 ttaatgcattaaatgaaacccatgtgattattgtgactgtgtacctgaaatatattgtagccaaacgattgtgagctctgatataagaaggatccaaccg 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  26209579 ttaatgcattaaatgaaacccatgtgattattgtgactgtgtacctgaaatatattgttgccaaacgattgtgagctctgttataagaaggatccaaccg 26209678  T
Q  326 aatagattcctcacactcaagaatagcttcttgaaaccttcctaatccaatcaaagcagcactcttattgcaatgataagttgccttatttgaatcaata 425  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26209679 aatagattcctcacactcaataattgcttcttgaaaccttcctaatccaatcaaagcagcactcttattgcaatgataagttgccttatttgaatcaata 26209778  T
Q  426 gcaattgctttgtcatacaaagccaaagcctcttcaaaattaccctttttgtatgcttcatttcccatagatttcaacacttcagggtctgcaatattgt 525  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26209779 gcaattgctttgtcatacaaagccaaagcctcttcaaacttaccctttttgtatgcttcatttcccattgatttcaacacttcagggtctgcaatattgt 26209878  T
Q  526 gccttt 531  Q
    ||||||    
T  26209879 gccttt 26209884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 8820909 - 8820718
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  8820909 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgttttggagagcttagggaaataacttatgattagtccataagctgtat 8820810  T
Q  101 tcagtttattttataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataact-tatacataag 191  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||    
T  8820809 tcaatttattttataagttctccaagatagcttatatgaaagcaatttcacgtaattttatcttttgttatagaaatatctctatacataag 8820718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 29116997 - 29117061
Alignment:
Q  126 gatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||| |||| || ||| || |||||||||||||||||||||||||||| |||||||||    
T  29116997 gatagcttatacgaaaacagtttgactttattttatcttttgttatagaaataacatatacataa 29117061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 35135730 - 35135793
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||  | ||| || |||||||||||||||||||||||||| |||||||||||    
T  35135730 atagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataa 35135793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 7853675 - 7853609
Alignment:
Q  112 tataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    ||||||||| ||||||||||| ||| | || |||||| || ||||||||||||||||||||||||||    
T  7853675 tataagttctccaagatagctaatacggaaacaatttaactttattttatcttttgttatagaaata 7853609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 28586687 - 28586797
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtat 100  Q
    |||||||| ||| |||||| ||  |||| |||||||||   | ||||||||||||||||||||||| ||||||| ||||||||   ||| |||||||| |    
T  28586687 tttggattgactaatttgaactagtctaatagcataagcatttgtgaaactgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttt 28586786  T
Q  101 tcagtttattt 111  Q
    |||| ||||||    
T  28586787 tcagcttattt 28586797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 18704133 - 18704178
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataagaaaatatatga 202  Q
    |||||||||||||||||||||||||||||||||||||  |||||||    
T  18704133 tttatcttttgttatagaaataacttatacataagaacttatatga 18704178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 9927584 - 9927524
Alignment:
Q  130 gcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||| |||||| |||| ||||||||||||  |||| |||||||||||||||||    
T  9927584 gcttatatgaaaacaatttgacgtaattttatcttttactatacaaataacttatacataa 9927524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 11457238 - 11457074
Alignment:
Q  10 acttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttat 109  Q
    |||||||||| |||||||| | ||| ||   || |||| ||||||| | |||||||| ||||| ||||||||||  ||||||||||||| ||||  ||||    
T  11457238 acttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataagctgt-ttcatattat 11457140  T
Q  110 tt-tataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaa 176  Q
    || |||||| || |||||||| ||  | ||||| |||||| || ||||| ||||||| ||||||||||    
T  11457139 ttctataagctctccaagataact--tttgaaaacaatttgactttattatatctttcgttatagaaa 11457074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 20982229 - 20982289
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    |||||||||| ||||||||||||||| |||||||||||| |  ||||||| ||||||||||    
T  20982229 ttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttat 20982289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 29588881 - 29588818
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| ||||||  | ||||||||| |||||||||||||||| ||||||||||||    
T  29588881 atagcttatatgaaaacaatttt-cattattttatattttgttatagaaatagcttatacataag 29588818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 32172800 - 32172708
Alignment:
Q  3 tggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagc 95  Q
    ||||| || |||||||| ||||| ||||||||||||  || |||| |  ||||||||||||||| ||||| ||||||||||  ||||||||||    
T  32172800 tggatctatttatttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagc 32172708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 985636 - 985573
Alignment:
Q  126 gatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    |||||||||| ||||| || ||| || ||||||||||||||||||| |||||||| ||||||||    
T  985636 gatagcttatgtgaaaacagtttgactttattttatcttttgttatggaaataacatatacata 985573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 14295508 - 14295457
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    ||||||||||||||| || ||| || ||||||||||||||||||||||||||    
T  14295508 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaata 14295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 7096221 - 7096259
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  7096221 ttattttatcttttgttatagaaatagcttatacataag 7096259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 13224405 - 13224367
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  13224405 ttattttatcttttgttatagaaatagcttatacataag 13224367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 33459029 - 33459067
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  33459029 ttattttgtcttttgttatagaaataacttatacataag 33459067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 34117627 - 34117665
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34117627 ttattttatcttttgttaaagaaataacttatacataag 34117665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 37063146 - 37063228
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    |||||||||||  | ||| || ||||||||||||||||||||||||||  ||||||||||| |  ||||||| ||||| ||||    
T  37063146 cttatatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagcatttat 37063228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 37611147 - 37611323
Alignment:
Q  12 ttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttattt 111  Q
    |||||||| |||||||||| ||| |||  || |||| | |||||| ||||||||| | ||| ||||| ||||  || |||||||||| ||||| ||||||    
T  37611147 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttattt 37611246  T
Q  112 t-ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
      ||||| || ||||||||||||||  |||| |||||| |  | |||||  ||||| ||||||||||| ||| ||||||||    
T  37611247 ccataagctctccaagatagcttat--gaaaacaatttgatttgatttt--cttttattatagaaatagcttttacataag 37611323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 37787877 - 37788053
Alignment:
Q  12 ttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttattt 111  Q
    |||||||| |||||||||| ||| |||  || |||| | |||||| ||||||||| | ||| ||||| ||||  || |||||||||| ||||| ||||||    
T  37787877 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttattt 37787976  T
Q  112 t-ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
      ||||| || ||||||||||||||  |||| |||||| |  | |||||  ||||| ||||||||||| ||| ||||||||    
T  37787977 ccataagctctccaagatagcttat--gaaaacaatttgatttgatttt--cttttattatagaaatagcttttacataag 37788053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 39128625 - 39128563
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaa 205  Q
    |||||| || ||||||||||||||||||||||| || |||||||||||| | |||||| ||||    
T  39128625 caatttgactttattttatcttttgttatagaattagcttatacataagcacatatattaaaa 39128563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 40048374 - 40048412
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  40048374 ttattttatcttttgttatagaaacaacttatacataag 40048412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 9202819 - 9202880
Alignment:
Q  130 gcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||| |||||| || ||||||||||||||| || ||||||| |||||| |||||    
T  9202819 gcttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataag 9202880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 11684423 - 11684341
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcactt 211  Q
    ||||||||||||||| || ||||||  |||||||| |||||||||| ||||| ||||||||| || |  ||||||| ||||||||    
T  11684423 atagcttatatgaaaacagtttcac--tattttatattttgttataaaaatagcttatacattagcacttatatgataagcactt 11684341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 12407755 - 12407792
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||||||| |||||||||||    
T  12407755 ttattttatcttttgttatagaaatagcttatacataa 12407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 12460094 - 12460131
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||||||| |||||||||||    
T  12460094 ttattttatcttttgttatagaaatagcttatacataa 12460131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 12595808 - 12595857
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaa 176  Q
    |||| |||||||||| |||||| || ||||||||||||||||||||||||    
T  12595808 atagtttatatgaaaacaatttaactttattttatcttttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 38047810 - 38047895
Alignment:
Q  11 cttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagct 96  Q
    |||| |||| |||||||||||  |||||  || |||  |||||||||||||||||| ||||| ||||||||||  |||||||||||    
T  38047810 cttacttgaacttatctactattataagtacttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccataagct 38047895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 1773521 - 1773557
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||| ||||||||||||    
T  1773521 attttatcttttgttatagaaatagcttatacataag 1773557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 26516274 - 26516214
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    ||||||||||||||||| |||||||| |||||||||||| |  ||||||| |||| |||||    
T  26516274 ttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttat 26516214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 32969185 - 32969241
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataactta 183  Q
    ||||||||||| |||  ||||| || |||||||||||||||||||||||| ||||||    
T  32969185 atagcttatataaaaataatttgactttattttatcttttgttatagaaacaactta 32969241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 39823190 - 39823254
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataa-cttatacataag 191  Q
    ||||||||||||||| | ||| || |||||||||||||||||||| |||||| || |||||||||    
T  39823190 tagcttatatgaaagtagtttgactttattttatcttttgttatataaataatctgatacataag 39823254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 10363743 - 10363696
Alignment:
Q  136 atgaaagcaatttcacgttattttatcttttgttatagaaataactta 183  Q
    |||||| |||||| || |||||||||||||||||||||||||| ||||    
T  10363743 atgaaaacaatttaactttattttatcttttgttatagaaatagctta 10363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 31208458 - 31208411
Alignment:
Q  144 aatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||| |||||| ||||| |||||||||||||||||||||| ||||||    
T  31208458 aatttgacgttaatttatattttgttatagaaataacttatgcataag 31208411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 37968892 - 37968829
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||| ||||||| || ||| || | |||||||||||||||||||||||| ||||||| ||||    
T  37968892 tagcttctatgaaaacactttgacctcattttatcttttgttatagaaatagcttatacctaag 37968829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 40097498 - 40097533
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacata 189  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40097498 tattttatcttctgttatagaaataacttatacata 40097533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 42583140 - 42583089
Alignment:
Q  138 gaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    |||| |||||| || |||||| ||||||||||||||||||| ||||||||||    
T  42583140 gaaaacaatttaactttatttcatcttttgttatagaaataccttatacata 42583089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 465954 - 465892
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||  ||| |||||| || |||||||||||||||| ||||||||| |||||| |||||    
T  465954 agcttatacaaaaacaatttaactttattttatcttttgtcatagaaatagcttatatataag 465892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 8089275 - 8089241
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataag 191  Q
    |||| ||||||||||||||||||||||||||||||    
T  8089275 tttaacttttgttatagaaataacttatacataag 8089241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 10303794 - 10303752
Alignment:
Q  136 atgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    |||||| |||||| || ||||||||||||||||||||||||||    
T  10303794 atgaaaacaatttgactttattttatcttttgttatagaaata 10303752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 11054162 - 11054124
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  11054162 ttattttatcttttattatagaaatagcttatacataag 11054124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 27106017 - 27106055
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  27106017 ttattttatcttttgttatagaaatgacttatacgtaag 27106055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 28586839 - 28586885
Alignment:
Q  132 ttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    |||||||||| || ||| || ||||||||||||||||||||||||||    
T  28586839 ttatatgaaaacagtttgactttattttatcttttgttatagaaata 28586885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 34690850 - 34690812
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  34690850 ttattttatcttttgttatagaaatagcgtatacataag 34690812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 36796774 - 36796836
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    ||||||||| |||||  ||||| || ||||||||| |||||||  ||||||||||||||||||    
T  36796774 atagcttatgtgaaaataatttaaccttattttattttttgttgcagaaataacttatacata 36796836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 43215376 - 43215323
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||||| |||||||||| || |||||| ||||||||||||||||||| ||||||    
T  43215376 cttatataaaagcaatttaactttattt-atcttttgttatagaaatagcttata 43215323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 912719 - 912780
Alignment:
Q  130 gcttatatgaaagcaatttc-acgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||| ||||||  || ||||||||| || ||||||||||||||||||| |||||    
T  912719 gcttatatgaaaacaattttgactttattttatattgtgttatagaaataacttattcataa 912780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 7674647 - 7674586
Alignment:
Q  130 gcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| |||| |||||| |  ||||||||||||||| |||||||||| |||||| |||||    
T  7674647 gcttataagaaaacaatttaaatttattttatcttttggtatagaaatagcttatatataag 7674586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 16945051 - 16945113
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| ||||||| |||||| ||  ||||||||||||| || |||||||| ||||||||||||    
T  16945051 atagcttctatgaaaacaatttaac--tattttatcttttcttgtagaaatagcttatacataag 16945113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 29158571 - 29158627
Alignment:
Q  130 gcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    |||||| |||||||||||| || ||| |||||||||||||| ||||||| ||||||||    
T  29158571 gcttatctgaaagcaatttgactttaatttatcttttgtta-agaaatagcttataca 29158627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 38033940 - 38033907
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||| |||||||||||||||||    
T  38033940 tttatcttttgttatataaataacttatacataa 38033907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 38047929 - 38047986
Alignment:
Q  133 tatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||  ||||| || |||||||||||||||||| ||| ||| |||||||||||    
T  38047929 tatatgaaaataatttgactttattttatcttttgttagagatatagcttatacataa 38047986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 4014518 - 4014554
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacata 189  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  4014518 ttattttatcttttgctatagaaatagcttatacata 4014554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 5377268 - 5377332
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||  ||| ||||||||| ||| |||||||||||||||| |||||  |||| ||||||    
T  5377268 atagcttatacaaaaacaatttcactttagtttatcttttgttatataaatagtttatgcataag 5377332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 5563680 - 5563648
Alignment:
Q  153 ttattttatcttttgttatagaaataacttata 185  Q
    |||||||||||||||||||||||||| ||||||    
T  5563680 ttattttatcttttgttatagaaatagcttata 5563648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 9703309 - 9703365
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    ||||||||||||||  | ||| || ||||||||||| |||||| |||||||||||||    
T  9703309 tagcttatatgaaatgagtttgactttattttatctcttgttacagaaataacttat 9703365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 11615508 - 11615452
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    |||||||| | || |||||| || |||||||||||||||||||| ||||| ||||||    
T  11615508 agcttatacgtaaacaatttgactttattttatcttttgttataaaaatagcttata 11615452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 12425573 - 12425509
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| |||| |||||| || ||||||||||||||  |||| |||||  |||||||||||    
T  12425573 atagcttatacgaaaacaatttaactttattttatcttttactatataaatagtttatacataag 12425509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 19113211 - 19113271
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    ||||||||| |||||||||| |||||  ||||||||||| || ||||||| || |||||||    
T  19113211 ttattttattttttgttataaaaatagtttatacataagcaattatatgataaacacttat 19113271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 32172655 - 32172591
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||| || ||| || || | ||||||||||||||| ||||||||  |||||||||||    
T  32172655 atagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataag 32172591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 34112877 - 34112813
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| ||| || || ||| || |||||||  |||||||||| ||||||||||||    
T  34112877 atagcttatatgaaaacaacttaactttaattaatcttttactatagaaatagcttatacataag 34112813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 115 - 191
Target Start/End: Original strand, 37112314 - 37112390
Alignment:
Q  115 aagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||| |||||| || |||||  ||| |||||| || || |||||||||||| | |||||||| ||||||||||||    
T  37112314 aagttctccaagacaggttatacaaaaacaatttaactttgttttatcttttgctgtagaaatagcttatacataag 37112390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 41981802 - 41981834
Alignment:
Q  153 ttattttatcttttgttatagaaataacttata 185  Q
    ||||||||||||||| |||||||||||||||||    
T  41981802 ttattttatcttttgatatagaaataacttata 41981834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 42569048 - 42569112
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| |||| |||||  || ||||||||||||||| |||||||||| ||| | ||||||    
T  42569048 atagcttatacgaaaacaattagactttattttatcttttgctatagaaatagctttttcataag 42569112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 266 - 515
Target Start/End: Original strand, 33531681 - 33531930
Alignment:
Q  266 gtacctgaaatatattgtagccaaacgattgtgagctctgatataagaaggatccaaccgaatagattcctcacactcaagaatagcttcttgaaacctt 365  Q
    ||||||||| |||||||| ||||||||  | ||||||||   ||||||||| || | || ||||| |||||||||||||| ||| || |  |||||||||    
T  33531681 gtacctgaagtatattgtcgccaaacggctatgagctctaggataagaagggtcaatcctaatagcttcctcacactcaacaattgcatgctgaaacctt 33531780  T
Q  366 cctaatccaatcaaagcagcactcttattgcaatgataagttgccttatttgaatcaatagcaattgctttgtcatacaaagccaaagcctcttcaaaat 465  Q
    || || |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| |||   ||||||||||||||||||||   |||      
T  33531781 cccaaaccaatcaaagcagcactcttgttacaatgataagttgccttattggaatcaatagcaatagctcgttcatacaaagccaaagcctcagaaaatc 33531880  T
Q  466 taccctttttgtatgcttcatttcccatagatttcaacacttcagggtct 515  Q
    | || | ||||||||||||||||||||| ||||||||||| |||||||||    
T  33531881 ttccttgtttgtatgcttcatttcccattgatttcaacacctcagggtct 33531930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 37273273 - 37273148
Alignment:
Q  11 cttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttatt 110  Q
    ||||||||| ||||| || |||||||||  ||||||| |||||||||||||||||| ||||| ||||||||||  ||||||||| ||| ||||  |||||    
T  37273273 cttatttgaacttatttattagcataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatt 37273174  T
Q  111 t-tataagttccccaagatagcttat 135  Q
    |  |||||||| ||||||||||||||    
T  37273173 tccataagttctccaagatagcttat 37273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 49586943 - 49587042
Alignment:
Q  87 tccataagctgtattcagtttattt-tataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    |||||||| ||| |||||||||||| | |||  || |||||||||||||||||||| || ||| || |||||||||||||||||||||||||| ||||||    
T  49586943 tccataagttgttttcagtttatttctttaatctctccaagatagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 70 - 191
Target Start/End: Original strand, 16790369 - 16790488
Alignment:
Q  70 aaataacttatgactagtccataagctgtattcagtttatttt-ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgt 168  Q
    ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |  ||||||||||||||  ||||  ||||| |  ||||||||||| ||||    
T  16790369 aaatagcttatgac-agtccataagctgttttcagtttattttcataagctatccaagatagcttat--gaaaataatttgattttattttatctgttgt 16790465  T
Q  169 tatagaaataacttatacataag 191  Q
    |||| ||||| ||||||||||||    
T  16790466 tataaaaatagcttatacataag 16790488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 1395673 - 1395611
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    |||||||||||||||  ||||| || |||||||||||||||||||||||||| ||||||||||    
T  1395673 atagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 10101548 - 10101601
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  10101548 cttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 10212473 - 10212526
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  10212473 cttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 42809301 - 42809242
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||||| |||||| ||  ||||||||||||||||||||||||| |||||||||    
T  42809301 agcttatatgaaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 22214749 - 22214811
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    |||| |||||||||  ||||||||| |||||||||| |||||||||||||||| |||||||||    
T  22214749 ataggttatatgaatacaatttcactttattttatcctttgttatagaaataatttatacata 22214811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 48364956 - 48365010
Alignment:
Q  136 atgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||| |||||| || ||||||||||||||||||| ||||||||||||||||||    
T  48364956 atgaaaacaatttgactttattttatcttttgttatcgaaataacttatacataa 48365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 49845461 - 49845543
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    |||||||| |||||||||| ||||| |||||| |||| | ||  ||||||| |||||||||||||| ||||| ||||||||||    
T  49845461 tttggattgacttatttgagcttatatactagtataaaaacttatgaaactatttgggagagcttatggaaacaacttatgac 49845543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 10357431 - 10357378
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    |||||||||||  ||||| || ||||||||||||||||||||||||||||||||    
T  10357431 cttatatgaaaaaaatttaacattattttatcttttgttatagaaataacttat 10357378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 15304420 - 15304472
Alignment:
Q  132 ttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    |||||||||| |||||| || |||||||||||||||||||||||||| |||||    
T  15304420 ttatatgaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 33883013 - 33882969
Alignment:
Q  144 aatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  33883013 aatttcactttattttatcttttgttatagaaataatttatacat 33882969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 2128335 - 2128382
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||| || |||||||||||||||||||||||||| |||||||||||    
T  2128335 caatttaactttattttatcttttgttatagaaatagcttatacataa 2128382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 25964418 - 25964359
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcactta 212  Q
    |||||||||||||||||||| ||||| |||||||| |||||  ||||||| |||||||||    
T  25964418 ttattttatcttttgttataaaaatagcttatacaaaagaacttatatgataagcactta 25964359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 32703140 - 32703077
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| |||||| |  |||||||||||||| | ||||||||| |||||||||||    
T  32703140 atagcttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataa 32703077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 905040 - 905102
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| || ||| || || |||||||||||||||||||||||||| ||||||| ||||    
T  905040 agcttatatgcaaacaaattgactttattttatcttttgttatagaaatagcttatacttaag 905102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 16790182 - 16790220
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  16790182 ttattttatcttttgttatagaaataacttatatataag 16790220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 20173982 - 20174020
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  20173982 ttattttatcttttgttatagaaataactaatacataag 20174020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 42084319 - 42084381
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    ||||||||||| ||| ||| || || |||||||||| ||||||||||||||| ||||||||||    
T  42084319 atagcttatatcaaaacaagttgacattattttatcctttgttatagaaatagcttatacata 42084381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 24605110 - 24605147
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||| |||||||||||||||||||||||||||||||    
T  24605110 ttatttcatcttttgttatagaaataacttatacataa 24605147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 36887496 - 36887463
Alignment:
Q  155 attttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||||||||||||||||||||||||||    
T  36887496 attttatcttttgttatagaaataacttatacat 36887463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 41028919 - 41029000
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagca 208  Q
    ||||||||| ||||| ||  || || ||||||| |||||||||||||||||| |||||||||||| |  ||||||| |||||    
T  41028919 atagcttatttgaaaacagattgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataagca 41029000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 44374720 - 44374793
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagca 208  Q
    ||||||| |||||| || |||||||||||||||||| ||| ||| |||||||||||| |  ||||||| |||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttatatgataagca 44374793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45590800 - 45590735
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagctta 66  Q
    |||| ||| |||| ||||| ||||||||||||||||||  || |||| ||||||||||||||||||    
T  45590800 tttgaattgacttttttgaacttatctactagcataagcacttgtgagactgtttgggagagctta 45590735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 48397648 - 48397587
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    |||||||| || ||| |||||| || |||||||||||||| ||||| |||||||||||||||    
T  48397648 atagcttaaataaaaacaatttgactttattttatcttttattataaaaataacttatacat 48397587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 8007763 - 8007827
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||| | || ||| || ||| |||||||||||||||||||| | ||||||||||||    
T  8007763 atagcttatatgataacagtttgactttactttatcttttgttatagaaacagcttatacataag 8007827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 20192674 - 20192738
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| |||||||||| |  ||| || |||||||||||||||||||| ||||| ||||||||||||    
T  20192674 atagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataag 20192738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 21872216 - 21872308
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataa 93  Q
    |||||||| |||||||||||||||||||||  ||||||  || |||| ||||||||| | |||||  | ||||| ||||||||  ||||||||    
T  21872216 tttggattaacttatttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccataa 21872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 25129832 - 25129768
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| ||||||||||||| ||| || ||||| ||||||||| ||||| ||||| |||||||||||    
T  25129832 atagattatatgaaagcagtttgactttattgtatcttttggtataggaataagttatacataag 25129768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 29771811 - 29771751
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    |||| ||||||||||  |||||||| ||| ||| ||||||| |||||||||||||||||||    
T  29771811 atagtttatatgaaaataatttcactttactttgtcttttggtatagaaataacttataca 29771751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 36445708 - 36445648
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    ||||||| |||||||||||||||||| ||||||||||| ||   |||||| ||||||||||    
T  36445708 ttattttctcttttgttatagaaatagcttatacataaaaactcatatgataagcacttat 36445648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 36783402 - 36783466
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataac-ttatacataa 190  Q
    |||| |||||||||| |||||| || ||||||||||||||| |||||||||| | ||||||||||    
T  36783402 atagtttatatgaaaacaattttactttattttatcttttggtatagaaatagctttatacataa 36783466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 40122828 - 40122884
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| || ||| || ||||||||||||||||||| |||||| ||||||||||||    
T  40122828 tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 42808979 - 42808923
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||||||| ||| |||||| || |||||||||||||||||||||||| | ||||||    
T  42808979 agcttatataaaaacaatttaactttattttatcttttgttatagaaacagcttata 42808923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 44061091 - 44061151
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||||||  ||| |||||| || ||||||||||||||| |||||||||| ||||||||    
T  44061091 atagcttatagaaaaacaatttaaccttattttatcttttgctatagaaatagcttataca 44061151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 51278220 - 51278300
Alignment:
Q  122 ccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatga 202  Q
    |||||||| |||| |||||| || ||| || |||||| || |||||||||||||||| ||||||||| || || |||||||    
T  51278220 ccaagataacttaaatgaaaacagtttgactttatttaatattttgttatagaaatagcttatacattagcaattatatga 51278300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 175
Target Start/End: Original strand, 52323863 - 52323990
Alignment:
Q  49 actgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttattt---tataagttccccaagatagcttatatgaaagcaa 145  Q
    |||||||| |||||||||  ||||||| |||||||  ||||||||||||| ||||  ||||||    ||||| || |||||||||||  ||| ||| |||    
T  52323863 actgtttgtgagagcttattgaaataatttatgacacgtccataagctgttttcaacttatttccacataagctctccaagatagct--tatcaaaacaa 52323960  T
Q  146 tttcacgttattttatcttttgttatagaa 175  Q
    ||| || |||||||||||||| | ||||||    
T  52323961 tttgaccttattttatcttttatcatagaa 52323990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 53736185 - 53736245
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||  | ||| || ||||||||||||||||||||||||||||| |||| ||||    
T  53736185 cttatatgaaaatagtttgacattattttatcttttgttatagaaataactcatacgtaag 53736245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 3182438 - 3182493
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||| |||||| || ||||||||||||||  ||||||| ||||||||||||||    
T  3182438 tatgaaaacaatttgactttattttatctttttctatagaagtaacttatacataa 3182493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 23793587 - 23793517
Alignment:
Q  130 gcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatg 201  Q
    |||||||||||| || ||| || |||||||||||||||||||| |||||  ||||||||||| || ||||||    
T  23793587 gcttatatgaaatcattttgactttattttatcttttgttata-aaatagtttatacataagcaattatatg 23793517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 38462283 - 38462220
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||| ||||||||| || ||| || ||||||||||||||| |||||||||| |||||| ||||    
T  38462283 atagcatatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataa 38462220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 44284087 - 44284187
Alignment:
Q  87 tccataagctgtattcagtttattt-tataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    |||||||||| | ||||| |||||| |||||| || ||| ||||||||||  |||| || ||| || || |||||| |||||||||||||||| ||||||    
T  44284087 tccataagctattttcagcttatttctataagctctccaggatagcttat--gaaaacagtttgactttgttttattttttgttatagaaatagcttata 44284184  T
Q  186 cat 188  Q
    |||    
T  44284185 cat 44284187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24158437 - 24158515
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataactta 79  Q
    ||||||||  ||||||| | ||||||||||  ||||||  || ||||||||||||| ||||||||| ||||| ||||||    
T  24158437 tttggattggcttatttaagcttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaacaactta 24158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 24235777 - 24235811
Alignment:
Q  153 ttattttatcttttgttatagaaataacttataca 187  Q
    |||| ||||||||||||||||||||||||||||||    
T  24235777 ttatattatcttttgttatagaaataacttataca 24235811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 27792872 - 27792810
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||  | ||| || ||||||||||||||||| | |||||| ||||||||||||    
T  27792872 agcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataag 27792810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 185
Target Start/End: Original strand, 32095287 - 32095317
Alignment:
Q  155 attttatcttttgttatagaaataacttata 185  Q
    |||||||||||||||||||||||||||||||    
T  32095287 attttatcttttgttatagaaataacttata 32095317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 36646454 - 36646508
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||||||||| |||||  || |||||||||||||||| ||||||||| ||||||    
T  36646454 cttatatgaaaacaattatactttattttatcttttgtcatagaaatagcttata 36646508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 39971295 - 39971257
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||| || |||||||||||||||    
T  39971295 ttattttatcttttgttatataagtaacttatacataag 39971257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 41159085 - 41159047
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  41159085 ttattttatctttagttataggaataacttatacataag 41159047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 183
Target Start/End: Complemental strand, 54775104 - 54775074
Alignment:
Q  153 ttattttatcttttgttatagaaataactta 183  Q
    |||||||||||||||||||||||||||||||    
T  54775104 ttattttatcttttgttatagaaataactta 54775074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 584195 - 584158
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataag 38  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  584195 tttggattgacttatttgagcttatctactagcataag 584158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 22232824 - 22232767
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||| || ||| || |||||||||| ||||||||| ||||| |||||||||    
T  22232824 cttatatgaaaacagtttgactttattttatcatttgttatataaatagcttatacat 22232767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 23816024 - 23815991
Alignment:
Q  158 ttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||| ||||||||||||||||||||||||    
T  23816024 ttatcttttattatagaaataacttatacataag 23815991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 24887352 - 24887409
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    |||||||||||||  || ||| || ||||||||||| |||||||||||||| ||||||    
T  24887352 tagcttatatgaatacagtttgactttattttatctattgttatagaaatagcttata 24887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 26990730 - 26990685
Alignment:
Q  133 tatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    |||||||||  ||||| || ||||||||||||||||||||||||||    
T  26990730 tatatgaaaagaatttgactttattttatcttttgttatagaaata 26990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 30669064 - 30669101
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  30669064 ttattttatcttttgttataaaaatagcttatacataa 30669101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 32663614 - 32663581
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||||||||| |||||    
T  32663614 tttatcttttgttatagaaataacttatgcataa 32663581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 34364007 - 34363950
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    ||||||||||||||| |||||  |||||||||||| | | |||||||||||| |||||    
T  34364007 atagcttatatgaaaacaattgtacgttattttatatgtagttatagaaatagcttat 34363950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 37689452 - 37689509
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    |||||||||||||||  ||||| || ||| |||||||||||||||| ||||| |||||    
T  37689452 atagcttatatgaaaataatttaactttactttatcttttgttataaaaatagcttat 37689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 37788836 - 37788800
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37788836 ttattttatcttttgttata-aaataacttatacataa 37788800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 51455852 - 51455908
Alignment:
Q  133 tatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||| | ||||||||| |||||||||||||||||||| |||||| || |||||||    
T  51455852 tatatgacaacaatttcactttattttatcttttgttata-aaataatttttacataa 51455908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 2304336 - 2304372
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  2304336 tattttatcttttattatagaaatagcttatacataa 2304372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 8933893 - 8933801
Alignment:
Q  44 gtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttatttt-ataagttccccaagatagcttat 135  Q
    |||| |||||||||||||| ||| ||||||| ||||||||  ||||| ||| || ||| || ||||||| ||||| || |||||||| |||||    
T  8933893 gtgagactgtttgggagagattaaggaaatagcttatgacatgtccaaaagttgcatttagcttattttcataagctctccaagataacttat 8933801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 12923393 - 12923453
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    |||||||||| ||||||| ||| || |||||||||||||| ||| || |||| ||||||||    
T  12923393 atagcttataagaaagcagtttgactttattttatcttttattacagcaatagcttataca 12923453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 20143901 - 20143869
Alignment:
Q  153 ttattttatcttttgttatagaaataacttata 185  Q
    |||||||||||||| ||||||||||||||||||    
T  20143901 ttattttatcttttattatagaaataacttata 20143869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 21131540 - 21131612
Alignment:
Q  113 ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||| || |||||||||||||||| ||| | |||| |  ||||||||| ||||| ||| |||||||||||||    
T  21131540 ataagctctccaagatagcttatatcaaaaccatttgattttattttatattttgatatggaaataacttata 21131612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 21367769 - 21367681
Alignment:
Q  49 actgtttgggagagcttagggaaataacttatgac-tagtccataagctgtattcagtttatttt-ataagttccccaagatagcttat 135  Q
    ||||||||||||| |||| | ||| | |||||||| | || || ||||||| ||||| ||||||| |||||||| ||||||||||||||    
T  21367769 actgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttat 21367681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 21862243 - 21862303
Alignment:
Q  127 atagcttatatgaaagcaatttcacgt-tattttatcttttgttatagaaataacttatac 186  Q
    ||||||||||||||| |||||| || | ||||||||||||||| ||||||| | |||||||    
T  21862243 atagcttatatgaaaacaatttgacttgtattttatcttttgtaatagaaacagcttatac 21862303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 23269288 - 23269320
Alignment:
Q  153 ttattttatcttttgttatagaaataacttata 185  Q
    |||||||||||||| ||||||||||||||||||    
T  23269288 ttattttatcttttattatagaaataacttata 23269320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 23785257 - 23785193
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||  || ||| || |||||||||||| || | |||||||||||||| ||||||    
T  23785257 atagcttatatgaatacagtttgactttattttatcttctgctgtagaaataacttatgcataag 23785193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 183
Target Start/End: Original strand, 23952202 - 23952230
Alignment:
Q  155 attttatcttttgttatagaaataactta 183  Q
    |||||||||||||||||||||||||||||    
T  23952202 attttatcttttgttatagaaataactta 23952230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 24158607 - 24158655
Alignment:
Q  164 tttgttatagaaataacttatacataagaaaatatatgaaaagcactta 212  Q
    |||||||||||||||||||||||||||| |  ||||||| ||| |||||    
T  24158607 tttgttatagaaataacttatacataagcacttatatgacaagaactta 24158655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 31010540 - 31010448
Alignment:
Q  12 ttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcag 104  Q
    |||||||| |||| |||||| ||||||| || ||||   |||||| || ||||||  |||| ||||||||||  ||||||||||||| |||||    
T  31010540 ttatttgaacttaactactaacataagaacttgtgagtgtgtttgtgaaagcttatagaaacaacttatgacatgtccataagctgttttcag 31010448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 39743880 - 39743844
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  39743880 tattttatattttgttattgaaataacttatacataa 39743844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 41155172 - 41155132
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaa 193  Q
    |||||| ||||| |||||||||||||||||| |||||||||    
T  41155172 ttatttaatcttgtgttatagaaataacttacacataagaa 41155132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 9e-19; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 30024702 - 30024638
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||    
T  30024702 atagcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataag 30024638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 6364151 - 6364087
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||| ||||   |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  6364151 atagcttatgtgaacagaatttcactttattttatcttttgttatagaaatagcttatacataag 6364087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 49219141 - 49219082
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatac 186  Q
    |||||||||||||||  ||||| || ||||||||| ||||||||||||||||||||||||    
T  49219141 atagcttatatgaaaataatttgactttattttatattttgttatagaaataacttatac 49219082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 25487599 - 25487677
Alignment:
Q  113 ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||  |||||||||||||||  ||  | || ||||||||| |||||||||||||||| ||||||||||||    
T  25487599 ataagttccccagaatagcttatatgaaaaaaacgtgactttattttattttttgttatagaaatagcttatacataag 25487677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27123273 - 27123355
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    |||||||| |||||||||| |||||  |||||||||||  || |||| |||||||| ||||||||| ||||| ||||||||||    
T  27123273 tttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgac 27123355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 5131256 - 5131367
Alignment:
Q  86 gtccataagctgtattcagtttatttt-ataagttccccaagatagcttata--tgaaagcaatttcacgttattttatcttttgttatagaaataactt 182  Q
    ||||||||| ||| ||||| ||||||  ||||| || ||| |||||||| ||  ||||| || ||| || |||||||||||||||||||| ||| |||||    
T  5131256 gtccataagttgttttcagcttatttccataagctctccaggatagcttttacatgaaaacattttaactttattttatcttttgttatataaacaactt 5131355  T
Q  183 atacataagaaa 194  Q
    ||||||||||||    
T  5131356 atacataagaaa 5131367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6987662 - 6987754
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataa 93  Q
    |||| ||| ||||| ||||  ||||||||||||||||| | | |||| |||||||||||||||||| ||| | ||||||||||  ||||||||    
T  6987662 tttgtattgacttaattgagtttatctactagcataagtgtttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataa 6987754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 30338660 - 30338724
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| || ||| || ||||| ||||||||||||||||||||  |||||||||||    
T  30338660 atagcttatatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacataag 30338724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 4071884 - 4071833
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    |||||||||||||||  ||||| || ||||||||||||||||||||||||||    
T  4071884 atagcttatatgaaaataatttgactttattttatcttttgttatagaaata 4071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 19422394 - 19422335
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcactta 212  Q
    ||||| ||||||||||||||||||||||||||||||||| |  ||||||| |||| ||||    
T  19422394 ttattatatcttttgttatagaaataacttatacataagcatttatatgataagcgctta 19422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 25896933 - 25896842
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccata 92  Q
    |||||||| ||||||||||  |||||||||||||| ||  || |||| ||||||| ||||||||||  |||||| ||||||||  |||||||    
T  25896933 tttggattcacttatttgagtttatctactagcattagcacttgtgagactgtttaggagagcttatagaaatagcttatgacatgtccata 25896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 26883997 - 26883934
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| |||||| || | ||||||||| || ||| |||||||||||||||||||    
T  26883997 atagcttatatgaaaacaatttaacttcattttatctcttcttagagaaataacttatacataa 26883934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 44119230 - 44119293
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| ||  || || || |||||||||||| ||||||||||||||||||||||    
T  44119230 atagcttatatgaaaacatattgactttgttttatcttttgctatagaaataacttatacataa 44119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 51098317 - 51098254
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||| ||||||||||||| ||| ||||||||||||||||| | |||| |||| |||||||||||    
T  51098317 atagtttatatgaaagcagtttgacgttattttatcttttataataggaatatcttatacataa 51098254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 187
Target Start/End: Original strand, 21043199 - 21043342
Alignment:
Q  44 gtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttatttt-ataagttccccaagatagcttatatgaaag 142  Q
    |||| |||||||||||||| ||| ||||| | ||||||||  || |||||||||| |||||| |||||| ||| | ||  || |||||||  |||||||     
T  21043199 gtgagactgtttgggagaggttatggaaacagcttatgacacgttcataagctgttttcagtgtattttcatatgctcttcaggatagct--tatgaaaa 21043296  T
Q  143 caatttcacgttattttatcttttgtt-atagaaataacttataca 187  Q
    || ||| ||  || ||||||||||||| ||||||||||||||||||    
T  21043297 cagtttaactataatttatcttttgttaatagaaataacttataca 21043342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 22684586 - 22684644
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||||||||| |||||| || |||||||| | ||||||||||||||| ||||||||    
T  22684586 agcttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttataca 22684644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 28623265 - 28623227
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  28623265 ttattttatcttttgttatataaataacttatacataag 28623227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 49803209 - 49803151
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    ||||| ||||| |||||| || | ||||||||||||| |||||||||||||||||||||    
T  49803209 cttatgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 49803151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 54327518 - 54327576
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatac 186  Q
    |||||||||||||| || ||| || || ||||||||||||||||||||| |||||||||    
T  54327518 tagcttatatgaaaacagtttgactttgttttatcttttgttatagaaacaacttatac 54327576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 3176216 - 3176253
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||| |||||||||||||||||||||||||||||||    
T  3176216 ttatttaatcttttgttatagaaataacttatacataa 3176253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 19154748 - 19154691
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    |||||||||||||||||||||| |  | ||||| ||||||||| ||||||||||||||    
T  19154748 atagcttatatgaaagcaatttgatttgattttttcttttgttttagaaataacttat 19154691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 24936286 - 24936249
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  24936286 ttattttatattttgttatagaaataacttatacataa 24936249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 44007939 - 44008004
Alignment:
Q  126 gatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||| ||||||  | ||||||||||||||| ||||| |||| |||||| |||||    
T  44007939 gatagcttatatgaaaacaatttgtctttattttatcttttggtatagtaatagcttatatataag 44008004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 51044553 - 51044590
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||||||| |||||||||||    
T  51044553 ttattttatcttttgttatagaaatagcttatacataa 51044590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 8130176 - 8130112
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||  ||||| || |||| ||||||||||||||||||| |||| |||| ||||    
T  8130176 atagcttatatgaaaataatttgactttatgttatcttttgttatagaaagaactcatacgtaag 8130112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 8422907 - 8422980
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatga 202  Q
    ||||||||||||||| ||||   || |||||||||||||| ||||| ||||| |||||||||||| | ||||||||    
T  8422907 atagcttatatgaaaacaatg--actttattttatctttttttataaaaatagcttatacataagcacatatatga 8422980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 23815363 - 23815311
Alignment:
Q  136 atgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    |||||| || ||| || ||||||||||||||||||||||||||||||| ||||    
T  23815363 atgaaaacagtttgacattattttatcttttgttatagaaataacttaaacat 23815311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 27043898 - 27043962
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| |||| |||||| || |||||||||| ||||||||| || || ||||||||||||    
T  27043898 atagcttatacgaaaacaatttaactttattttatcctttgttatataagtaccttatacataag 27043962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 29373955 - 29374019
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||  || ||| || |||||||||||| ||||||||||||| |||||| |||||    
T  29373955 atagcttatatgaatacattttgacattattttatcttctgttatagaaatagcttatatataag 29374019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 47119033 - 47119085
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataa 179  Q
    ||||||||||||||| |||||| || || |||||||||||| |||||||||||    
T  47119033 atagcttatatgaaaacaatttaactttgttttatcttttgatatagaaataa 47119085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 47946200 - 47946136
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| |||| |||||| || | ||||||||||  ||||||||||||||||||| |||||    
T  47946200 atagcttatacgaaaacaatttaacttcattttatcttacgttatagaaataacttataaataag 47946136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 47970292 - 47970256
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||| ||||||||||||    
T  47970292 attttatcttttgttatagaaatagcttatacataag 47970256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 52735120 - 52735068
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataactta 183  Q
    |||||||||||| ||||| || |||||||||||||||||| ||||||| ||||    
T  52735120 cttatatgaaagtaatttgactttattttatcttttgttacagaaatagctta 52735068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 54325105 - 54325165
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||||||||||| || ||| || |||||||||||||||| |||||||||  |||||||    
T  54325105 atagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttataca 54325165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 4191712 - 4191677
Alignment:
Q  156 ttttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||| ||||||||||||    
T  4191712 ttttatcttttgttatagaaatagcttatacataag 4191677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 188
Target Start/End: Complemental strand, 35743280 - 35743245
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacat 188  Q
    |||||||||||||||||||||||||||||| |||||    
T  35743280 ttattttatcttttgttatagaaataacttgtacat 35743245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 52645845 - 52645880
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||||| |||||||||||    
T  52645845 attttatcttttgttatagaaatagcttatacataa 52645880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 54986415 - 54986361
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||| || |||| |||| |||||||||||||||| |||||||||||    
T  54986415 tatgaaagcaatttgactttatcttat-ttttgttatagaaatagcttatacataa 54986361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 3155589 - 3155543
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    |||||| || ||||||||||||||| |||||||||| ||||||||||    
T  3155589 caatttaactttattttatcttttgctatagaaatagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 4798653 - 4798691
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  4798653 ttattttatcttttgatatagaaatagcttatacataag 4798691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 9680660 - 9680602
Alignment:
Q  133 tatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| | |||||| || |||||||||||||| |||| |||||| ||||||||||||    
T  9680660 tatatgagaacaatttgactttattttatcttttattatcgaaatagcttatacataag 9680602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 17884071 - 17884009
Alignment:
Q  126 gatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    |||| ||||||  ||| |||||| || |||||||||||||||||||||||||| |||| ||||    
T  17884071 gataacttatacaaaaacaatttaactttattttatcttttgttatagaaatagcttacacat 17884009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 21953045 - 21952987
Alignment:
Q  53 tttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttattt 111  Q
    |||||||||||||| ||||| ||||||||||  |||||||| |||| || |||||||||    
T  21953045 tttgggagagcttatggaaagaacttatgacatgtccataacctgtttttagtttattt 21952987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 35958656 - 35958594
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||| |||  ||||| || |||||||| ||| ||||||||||||| |||||||||||    
T  35958656 tagcttatataaaacaaatttgactttattttaacttatgttatagaaatagcttatacataa 35958594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 44138555 - 44138497
Alignment:
Q  133 tatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| ||||||||||| || |||||||||||| || |||||||| | ||||||||||||    
T  44138555 tatacgaaagcaatttaactttattttatcttctgctatagaaacagcttatacataag 44138497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 44249259 - 44249225
Alignment:
Q  156 ttttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||| ||||||||||||||||||    
T  44249259 ttttatcttttgttattgaaataacttatacataa 44249225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 53626778 - 53626717
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatag--aaataacttatac 186  Q
    ||||||||||||||| || ||| |  |||||||||||||||||||||  |||||||||||||    
T  53626778 atagcttatatgaaaacattttgaatttattttatcttttgttatagaaaaataacttatac 53626717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 4684071 - 4684136
Alignment:
Q  46 gaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttattt 111  Q
    ||||||||||||||||||||||  |||||||||| |||  |||| |||||||| || || ||||||    
T  4684071 gaaactgtttgggagagcttagtaaaataacttaagacatgtccgtaagctgtttttagcttattt 4684136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 6978929 - 6978994
Alignment:
Q  47 aaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttatttt 112  Q
    ||||||||||| ||| ||||  |||||||||||||||  ||| ||||||||| ||||| |||||||    
T  6978929 aaactgtttggcagaacttattgaaataacttatgacatgtctataagctgttttcagcttatttt 6978994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 21952963 - 21952906
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    ||||||||||||||| |||||| || ||||||||  | |||||||||||||| |||||    
T  21952963 atagcttatatgaaaacaatttgactttattttacttgttgttatagaaatagcttat 21952906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 25717742 - 25717653
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtcca 90  Q
    ||||||||  ||||||||| ||||| |||   ||||||  || |||||| ||||||| |||||||| ||||| ||||||||||| |||||    
T  25717742 tttggattgtcttatttgagcttatgtaccgacataagcacttgtgaaattgtttggaagagcttatggaaacaacttatgacttgtcca 25717653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 31038939 - 31038996
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||| |||||| || ||||||||||| || || |||||||||| |||||||    
T  31038939 cttatatgaaaacaatttgactttattttatctattattgtagaaataacgtatacat 31038996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 41701511 - 41701560
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    ||||||||||||| | |||| || |||||||||||||||||||| |||||    
T  41701511 agcttatatgaaaacgatttgactttattttatcttttgttatataaata 41701560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 42641727 - 42641764
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  42641727 ttattttatcttttgttatggaaatagcttatacataa 42641764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 52294042 - 52294083
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaa 176  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||    
T  52294042 tatgaaaacaatttcactttattttatctttggttatagaaa 52294083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 1404414 - 1404366
Alignment:
Q  137 tgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||| |||||| || |||||||||||||| ||||||||||| ||||||    
T  1404414 tgaaaacaatttgaccttattttatcttttattatagaaatagcttata 1404366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 4663792 - 4663828
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataag 191  Q
    |||||||  ||||||||||||||||||||||||||||    
T  4663792 attttattctttgttatagaaataacttatacataag 4663828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 11389528 - 11389464
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| |||||| ||| || ||| || ||| |||||||||| |||||||||||| |||||||||||    
T  11389528 atagtttatattaaaacagtttaactttactttatctttttttatagaaataatttatacataag 11389464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 18630682 - 18630618
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| | | || || ||||||||||||||||||| ||||||  |||| ||||||    
T  18630682 atagcttatatgaaaaccaattgactttattttatcttttgttattgaaatagtttatgcataag 18630618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 19429476 - 19429528
Alignment:
Q  44 gtgaaactgtttgggagagcttagggaaataacttatgactagtccataagct 96  Q
    |||| |||||||||||||||||| ||| | ||||||||||  |||||||||||    
T  19429476 gtgagactgtttgggagagcttatggagaaaacttatgacatgtccataagct 19429528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 20907156 - 20907112
Alignment:
Q  146 tttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||| |||||||||||||| ||||| ||||| |||||||||||    
T  20907156 tttcactttattttatcttttcttatacaaatagcttatacataa 20907112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 24160964 - 24160928
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataag 191  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  24160964 attttatcctttgttatagaaatagcttatacataag 24160928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 25885861 - 25885797
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||| | |||| |||||| || ||||||||||||||| |||||||| | || |||||||||    
T  25885861 atagcttacacgaaaacaatttaactttattttatcttttgctatagaaagagctaatacataag 25885797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 26520297 - 26520361
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||| | |||| |||||| || |||||| ||||||||||||||||| |  |||||||||||    
T  26520297 atagcttacacgaaaacaatttaactttatttcatcttttgttatagaaacagtttatacataag 26520361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 27725315 - 27725271
Alignment:
Q  49 actgtttgggagagcttagggaaataacttatgactagtccataa 93  Q
    |||||||| ||||||||| ||||||||||||||||  ||||||||    
T  27725315 actgtttgagagagcttatggaaataacttatgacatgtccataa 27725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 30207639 - 30207702
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| || ||| |  ||||||||| ||||||||||||| |||| ||||||||||    
T  30207639 atagcttatatgaaaacagtttgat-ttattttattttttgttatagaactaacatatacataag 30207702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 45128406 - 45128442
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||||  |||||||||||    
T  45128406 attttatcttttgttatagaaatagtttatacataag 45128442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 46860066 - 46860002
Alignment:
Q  2 ttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagctta 66  Q
    ||||||| |||||||||| |||||||| |  ||||||  || ||||||||||||| |||||||||    
T  46860066 ttggattgacttatttgaacttatctattcacataagcacttgtgaaactgtttgagagagctta 46860002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 4e-18; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 3836604 - 3836791
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtat 100  Q
    ||||||||  ||||||||| |||||||||| || ||||  || |||||||||||||||||| |||| | ||||| |||||||| | | ||||||| || |    
T  3836604 tttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgac-attacataagccgtct 3836702  T
Q  101 tcagtttatttt-ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||  ||||||| || || || ||||||||||||||| ||||   |||| || | ||||||||  |||||||||||||| |||||||||||    
T  3836703 tcaacttattttcattagctctccaagatagcttatacgaaaatcatttaacttgattttatc--ttgttatagaaatagcttatacataa 3836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 39539760 - 39539914
Alignment:
Q  59 agagcttagggaaataacttatgactagtccataagctgtattcagtttatttt-ataagttccccaagatagcttatatgaaagcaatttcacgttatt 157  Q
    |||| ||| ||||| ||||||||||  ||||||||||||| ||||| ||||||| | ||| |||| | |||||||||||||||| |||||| |  |||||    
T  39539760 agagtttacggaaacaacttatgacatgtccataagctgttttcagcttattttgacaagctcccgaggatagcttatatgaaaacaatttgaatttatt 39539859  T
Q  158 ttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcactta 212  Q
    ||  ||||| |||| |||||| |||||||| ||| |  ||||||| |||||||||    
T  39539860 ttcacttttattatcgaaatagcttatacaaaagcagttatatgataagcactta 39539914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 27121656 - 27121740
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    ||||||||||||| |||||| || |||||||||| ||| ||||||||||| |||||||||||| || ||||||| |||| |||||    
T  27121656 agcttatatgaaaacaatttgactttattttatcatttattatagaaatatcttatacataaggaattatatgataagcgcttat 27121740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 48157188 - 48157251
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||| ||| ||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  48157188 atagcttatattaaaacaatttcactttattttatcttttattatagaaataagttatacataa 48157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 39591539 - 39591593
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  39591539 cttatatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 1432061 - 1432101
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaa 193  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1432061 ttattttatcttttgttatagaaataacttatacataagaa 1432101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 28165093 - 28165029
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| ||| |||||| || | |||||||||||||||||||||| ||||||||||||||    
T  28165093 atagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacataag 28165029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 35536105 - 35536045
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| |||||| || |||||||||||| ||||||||||||| ||||||||||||    
T  35536105 cttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataag 35536045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 23918959 - 23918896
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| |||||| || |||||||||||||||| ||||| |||||||| ||||||    
T  23918959 atagcttatatgaaaacaatttgactttattttatcttttgtaatagagataacttacacataa 23918896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 33894622 - 33894561
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||| || ||| || |||||||||||||||||||||||||| ||||||||||||    
T  33894622 agcttatatgaaaacagtttgac-ttattttatcttttgttatagaaatagcttatacataag 33894561  T

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Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 1417263 - 1417203
Alignment:
Q  130 gcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||| |||||| || |||||||||||||||||||| |||||  ||||||||||    
T  1417263 gcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataa 1417203  T

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Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 49060542 - 49060479
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||| |||  ||||| || ||||||||| |||||||||||||||| |||||||||||    
T  49060542 atagcttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataa 49060479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 5006581 - 5006639
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    ||||||||||| || ||| || ||||||||||||||||||||| |||| ||||||||||    
T  5006581 cttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 22759187 - 22759125
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||| ||||||  | |||||||||||||||||||| ||||| |||| ||||||    
T  22759187 tagcttatatgaaaacaattttcctttattttatcttttgttatacaaatagcttaaacataa 22759125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Complemental strand, 42656531 - 42656453
Alignment:
Q  113 ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||| || |||||||||||||||  |||   |||| || |||||||||||||||||||||||||| |||||| |||||    
T  42656531 ataagctctccaagatagcttatacaaaaatgatttgactttattttatcttttgttatagaaatagcttatatataag 42656453  T

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Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 3279656 - 3279693
Alignment:
Q  163 ttttgttatagaaataacttatacataagaaaatatat 200  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  3279656 ttttgttatagaaataacttatacataagcaaatatat 3279693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 28178963 - 28178910
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||| |||| | || |||||||||||||||||||||||||| |||||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 31341197 - 31341132
Alignment:
Q  126 gatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| ||||||| ||| || ||| || |||||||||||||||||||| ||||| ||||||||||||    
T  31341197 gataacttatataaaaccagtttgactttattttatcttttgttatacaaatagcttatacataag 31341132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 31908377 - 31908438
Alignment:
Q  126 gatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||||||||||||||||||| || |||||| |||| ||||||| |||||| | ||||||    
T  31908377 gatagcttatatgaaagcaatttgactttatttcatctattgttatcgaaatagcatataca 31908438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 43152969 - 43153030
Alignment:
Q  127 atagcttatatgaaag-caatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||| |||||||  |||||| || |||||||||||||||||||||||||| ||||||||    
T  43152969 atagcttgtatgaaaaacaatttaactttattttatcttttgttatagaaatagcttataca 43153030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 2013173 - 2013137
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||||| |||||||||||    
T  2013173 attttatcttttgttatagaaataaattatacataag 2013137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 191
Target Start/End: Complemental strand, 7244741 - 7244640
Alignment:
Q  89 cataagctgtattcagtttatttt-ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    |||||| ||| ||||| ||||||| ||||| || |||| |||||||||  |||| || ||| || || |||||||||||| |||||||||| ||||||||    
T  7244741 cataagttgttttcagcttattttcataagctctccaatatagcttat--gaaaacagtttgactttcttttatcttttgatatagaaatagcttataca 7244644  T
Q  188 taag 191  Q
    ||||    
T  7244643 taag 7244640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8427162 - 8427070
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataa 93  Q
    |||||||| | |||||||| ||||||||||| ||||||  || |||| |||||||||| |||| || ||||| |||||| |||  ||||||||    
T  8427162 tttggattgatttatttgagcttatctactaacataagtacttgtgagactgtttgggggagcctatggaaacaacttacgacgtgtccataa 8427070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23215004 - 23214896
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtat 100  Q
    |||||||| |||||||||| |||||||||||||||||   ||  ||| |||||||| ||||  ||| | ||| ||||||||||   |||||||||| |||    
T  23215004 tttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacatttccataagctctat 23214905  T
Q  101 tcagtttat 109  Q
    |||| ||||    
T  23214904 tcagcttat 23214896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 35808999 - 35809035
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35808999 tattttatcttttgttatagaaatagcttatacataa 35809035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 44241836 - 44241800
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacata 189  Q
    ||||||||||| |||||||||||||||||||||||||    
T  44241836 ttattttatctgttgttatagaaataacttatacata 44241800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 45593791 - 45593851
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| || ||| || ||||||||| |||||||| ||||||| ||||||||||||    
T  45593791 cttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataag 45593851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 45813248 - 45813312
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| |||||||||| ||| || || ||||||||||||||| |||||||||| |||||| |||||    
T  45813248 atagattatatgaaaacaagttgactttattttatcttttggtatagaaatagcttataaataag 45813312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 47046178 - 47046255
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaata----acttatacataagaaaatatatga 202  Q
    ||||||||||||| |||||| || |||||||||| |||||| ||||||||    |||||||||||||||  |||||||    
T  47046178 agcttatatgaaaacaatttgactttattttatcctttgttgtagaaataacatacttatacataagaagttatatga 47046255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 3968289 - 3968324
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||||||| ||||||||||||||||||||    
T  3968289 ttattttatcttttgctatagaaataacttatacat 3968324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 5373201 - 5373142
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcactta 212  Q
    |||||||||||||||||||||||||| | |||||||||| |  || |||| |||||||||    
T  5373201 ttattttatcttttgttatagaaatagcatatacataagcacttacatgataagcactta 5373142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 6552365 - 6552424
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    |||||||||||||||| |||||||||||| |||||||| |  ||||||| ||| ||||||    
T  6552365 tattttatcttttgttgtagaaataacttgtacataagcacttatatgataagtacttat 6552424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 12835005 - 12835056
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    |||||| |||||||| |||||| || ||||||||||||||||| ||||||||    
T  12835005 atagctaatatgaaaacaatttgactttattttatcttttgttgtagaaata 12835056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 21853200 - 21853247
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||| || |||||||||||||||| |||||||||||||||| ||||    
T  21853200 caatttaactttattttatcttttgtaatagaaataacttatatataa 21853247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 188
Target Start/End: Complemental strand, 25600726 - 25600691
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||| ||||||||||||||||||||||||||    
T  25600726 ttattttatattttgttatagaaataacttatacat 25600691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 30456522 - 30456569
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    ||||||||||| |||||| || ||||||||||||||||| ||||||||    
T  30456522 cttatatgaaaacaatttgactttattttatcttttgttttagaaata 30456569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 30496706 - 30496643
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||| ||||| |||| |||||| || ||||||||| ||||||||||||||||  ||||||||||    
T  30496706 ataggttatacgaaaacaatttgactttattttatattttgttatagaaatagtttatacataa 30496643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 39551616 - 39551675
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatac 186  Q
    ||||||||||||||| || ||| || ||| | |||||||||||||||||||| |||||||    
T  39551616 atagcttatatgaaaacagttttactttagtatatcttttgttatagaaatagcttatac 39551675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 40689054 - 40689105
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    |||||||||||||||  ||||| || ||||||||||||||| ||||||||||    
T  40689054 atagcttatatgaaaataatttaactttattttatcttttgctatagaaata 40689105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 43318598 - 43318653
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    ||||||||||| | |||||| || |||||||||| ||||||||||||||| |||||    
T  43318598 agcttatatgataacaatttgactttattttatcatttgttatagaaatagcttat 43318653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 48157084 - 48157151
Alignment:
Q  44 gtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttattt 111  Q
    |||| ||||||||||||||||||  |||| |||||||| |  ||||||||||||| ||||| ||||||    
T  48157084 gtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttattt 48157151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 2012683 - 2012745
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||| |||||| || |||||| || |||||  ||||||||| |||||||||||    
T  2012683 tagcttatatgaaaacaatttgacattatttaatattttggcatagaaatagcttatacataa 2012745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 2030710 - 2030648
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||| |||||| || |||||| || |||||  ||||||||| |||||||||||    
T  2030710 tagcttatatgaaaacaatttgacattatttaatattttggcatagaaatagcttatacataa 2030648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 5272889 - 5272951
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||| |||| | || | |||||||||||||||||| |||||  ||||||||||    
T  5272889 tagcttatatgaaaacaatgtgacttaattttatcttttgttatataaatagtttatacataa 5272951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 7453465 - 7453527
Alignment:
Q  127 atagcttatatgaaagcaa-tttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||||||| ||| ||| || ||||||||||||||| |||||||| | |||||||||    
T  7453465 atagcttatatgaaaacaaatttgactttattttatcttttgctatagaaaaatcttatacat 7453527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 24973920 - 24973882
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  24973920 ttattttatcttttgttatagaaatagcttttacataag 24973882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 28702733 - 28702699
Alignment:
Q  156 ttttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||||||||||| |||||||||||    
T  28702733 ttttatcttttgttatagaaatagcttatacataa 28702699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39542221 - 39542303
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    ||||| || ||||||||||  |||||||||||||||||  || | || || ||||  ||||||||| ||||||||||||||||    
T  39542221 tttgggttgacttatttgagtttatctactagcataagcacttgcgagacagttttagagagcttatggaaataacttatgac 39542303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 1418429 - 1418372
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||| ||  || || ||||| ||||||||||||||||||||| ||||||||    
T  1418429 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 1418372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 2223120 - 2223087
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||| |||||||||||    
T  2223120 tttatcttttgttatagaaatagcttatacataa 2223087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 4572600 - 4572543
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    ||||||||||||| | ||| || || |||||||||||||||||||||| ||| |||||    
T  4572600 atagcttatatgatatcaaattgactttattttatcttttgttatagatatagcttat 4572543  T

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Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 4591518 - 4591481
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  4591518 ttattttatcttttgttatagagatagcttatacataa 4591481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 30134049 - 30133988
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||| |||| ||| || || ||||||||||||||||| || ||||| |||||||||||    
T  30134049 agcttatacgaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataa 30133988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 35007580 - 35007543
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  35007580 ttattttatctttagttatagaaatagcttatacataa 35007543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 46825097 - 46825052
Alignment:
Q  130 gcttatatgaaagcaatttcacgttattttatcttttgttatagaa 175  Q
    |||||||||||| |||||| || |||||||||||||| ||||||||    
T  46825097 gcttatatgaaaacaatttgactttattttatctttttttatagaa 46825052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 389767 - 389831
Alignment:
Q  124 aagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    |||||| ||||||  ||| |||||| || ||||||| |||| ||||||| |||||||||||||||    
T  389767 aagataccttataccaaaacaatttaactttattttttcttctgttataaaaataacttatacat 389831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 992046 - 991982
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttatatta 217  Q
    ||||||||| |||||||||||||| ||||||||| |||| |  ||||||| || |||||| ||||    
T  992046 ttattttattttttgttatagaaacaacttatacgtaagcacttatatgataaacacttaaatta 991982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 2767246 - 2767310
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||| ||||| ||||||    ||||||||||||||||||||||||||  |||||| ||||    
T  2767246 atagcttatgtgaaaacaatttatatttattttatcttttgttatagaaatagattatacttaag 2767310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 3610836 - 3610872
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  3610836 attttatcttttgttgtagaaatagcttatacataag 3610872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 7623114 - 7623078
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacata 189  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  7623114 ttattttaccttttgttataaaaataacttatacata 7623078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 30180053 - 30180001
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataa 179  Q
    |||||||||| |||| |||||| || ||||||||||||||| ||| |||||||    
T  30180053 atagcttatacgaaaacaatttaactttattttatcttttgctatcgaaataa 30180001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 30535537 - 30535501
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  30535537 attttatcttttgttatagaagtaacttatacgtaag 30535501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 43250710 - 43250810
Alignment:
Q  91 taagctgtattcagtttatttt-ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    |||| ||| |||||||||| || ||||| || |||| |||||||||| ||||   | || || ||||||||||||||||| |||| ||| ||||||||||    
T  43250710 taagttgttttcagtttatattcataagctctccaaaatagcttatacgaaaaacaattaactttattttatcttttgttctagacatagcttatacata 43250809  T
Q  190 a 190  Q
    |    
T  43250810 a 43250810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 47177638 - 47177578
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||||||||||| |||||| || || |||| | ||||| |||||||||| ||||||||    
T  47177638 atagcttatatgaaaacaatttaactttgttttgtattttgatatagaaataccttataca 47177578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 15120332 - 15120198
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtat 100  Q
    |||||||| |||||||||| |||||||||||||||||    | ||||| ||||||||||||||||| ||||| ||||||||||  || ||| |||||| |    
T  15120332 tttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttatgacatgttcattagctgttt 15120233  T
Q  101 tcagtttatttt-ataagttccccaagatagctta 134  Q
    | || ||||||| ||||| || ||| |||||||||    
T  15120232 taagcttattttgataagctctccatgatagctta 15120198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 3673805 - 3673724
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcactta 212  Q
    ||||||||||| |||||| || ||||||||| ||||||||||||||||||| ||||||||| |  ||||||| || ||||||    
T  3673805 cttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttatatgacaaacactta 3673724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 28803575 - 28803660
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    |||||||||||||| || ||| || ||||||||||||||||||| ||||||||||||| ||||| |  ||||||| ||||| ||||    
T  28803575 tagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataagcatttat 28803660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 10143174 - 10143110
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| ||| || ||| || | |||||||||||||||||||||||||||||||||||||    
T  10143174 atagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataag 10143110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 10150749 - 10150694
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||| | |||| ||||||||||||||||| |||||||||||||||||||||||    
T  10150749 tatgaaaaccatttaacgttattttatcttttattatagaaataacttatacataa 10150694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 5133748 - 5133703
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatat 198  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  5133748 ttattttatcttttgttatagaaatagcttatacataagcaaatat 5133703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 2416315 - 2416251
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| ||| |||||| || | ||||||||||||| || ||||||||||||||||||||    
T  2416315 atagcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatacataag 2416251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 11344352 - 11344416
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| ||||||| |||||| || || ||||||||||||||||||||||| ||||| ||||||    
T  11344352 atagcttgtatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataag 11344416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 18962106 - 18962170
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| || ||| || |||||||||||||||||||| ||||| || |||||||||    
T  18962106 atagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataag 18962170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 1939419 - 1939458
Alignment:
Q  146 tttcacgttattttatcttttgttatagaaataacttata 185  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  1939419 tttcactttattttatcttttgttatagaaataacttata 1939458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 17952770 - 17952833
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||  | ||| || |||||||||||||||||||||||||| |||||| |||||    
T  17952770 tagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataag 17952833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 40837502 - 40837557
Alignment:
Q  133 tatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||| |||||| || ||| |||||||||||||||||||||| |||||||||    
T  40837502 tatatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9996887 - 9996805
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    ||||| || |||||||||| |||||| |||||||||||  || |||| |||| |||||||||||||  |||| ||||||||||    
T  9996887 tttggcttgacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatgac 9996805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 11513900 - 11513840
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| |||||| || |||||||||||||||||   | ||||||||||||||||    
T  11513900 atagcttatatgaaaacaatttgactttattttatcttttgtt---gtaataacttatacataa 11513840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 13630354 - 13630427
Alignment:
Q  132 ttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaa 205  Q
    |||||||||| || ||| || |||| |||||||||| || |||||||||||||||||||| |  ||||||||||    
T  13630354 ttatatgaaaacagtttgactttatcttatcttttgatagagaaataacttatacataagcacctatatgaaaa 13630427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 24141743 - 24141780
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||| |||||||||||||||||||||    
T  24141743 ttattttatcttttgtgatagaaataacttatacataa 24141780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 25609935 - 25609854
Alignment:
Q  11 cttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccata 92  Q
    ||||||||| ||||||||||| ||||||| || |||| |||| |||| | |||||| ||||| |||||||||| | ||||||    
T  25609935 cttatttgagcttatctactaacataagaacttgtgagactgcttggaatagcttatggaaacaacttatgacaaatccata 25609854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 3611212 - 3611164
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||| || |||||||| |||||| |||||||||||||||||||||||    
T  3611212 caatttaactttattttaccttttgctatagaaataacttatacataag 3611164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 4550779 - 4550715
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| |||||||||| ||  || ||||||||||||||||| |||| |||| ||||||||||||||    
T  4550779 atagtttatatgaaaacagcttgacgttattttatcttttattatggaaacaacttatacataag 4550715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 15173502 - 15173466
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacata 189  Q
    |||||| ||||||||||||||||||||||||||||||    
T  15173502 ttatttcatcttttgttatagaaataacttatacata 15173466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 16503492 - 16503420
Alignment:
Q  11 cttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    |||||||||  ||||||| | |||||||  || |||| ||||||||||||||||||| |||||| ||||||||    
T  16503492 cttatttgagattatctagtggcataagtacttgtgacactgtttgggagagcttagagaaatagcttatgac 16503420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 25609798 - 25609734
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| ||||  || || || |||||||||||||| ||||||||||| ||||||||||||    
T  25609798 atagcttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataag 25609734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 32098384 - 32098440
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| || ||| || |||||||||||||||||||||||||| |||||| |||||    
T  32098384 tatgaaaacactttgactttattttatcttttgttatagaaatagcttatatataag 32098440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 39567889 - 39567845
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    |||||| || |||||||||||||||||||||||||| ||||||||    
T  39567889 caatttaactttattttatcttttgttatagaaatatcttataca 39567845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 43199416 - 43199356
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    |||||||||| |||   ||||| || ||||||||||||||||| |||||||||||||||||    
T  43199416 atagcttatacgaagataatttaactttattttatcttttgttgtagaaataacttataca 43199356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 3423836 - 3423899
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||| ||||||||||  ||||| || ||||||||||||||| || | |||||||||||||||||    
T  3423836 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 3423899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 3458657 - 3458598
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    |||||||||||||  | ||| || |||||||||||||||||||| |||||||||| ||||    
T  3458657 agcttatatgaaaaaagtttgactttattttatcttttgttataaaaataacttagacat 3458598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28803451 - 28803546
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagct 96  Q
    |||||||| |||||||||| |||||||||  |||||||  |  |||| |||||||| |||| | || ||||| ||||||||||  |||||||||||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataagct 28803546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 35459911 - 35459852
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||||| |||| |||||| || ||||||||||||||| |||| ||||| ||||||||    
T  35459911 tagcttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttataca 35459852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 38239647 - 38239682
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||||| |||||||||||    
T  38239647 attttatcttttgttatagaaatagcttatacataa 38239682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 40672872 - 40672927
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||| |||| | || |||||||||||||| | |||||||||||||||||||||    
T  40672872 tatgaaaacaatgtgactttattttatcttttttcatagaaataacttatacataa 40672927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 191
Target Start/End: Original strand, 41033047 - 41033082
Alignment:
Q  156 ttttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||| ||||||||||||    
T  41033047 ttttatcttttgttatagaaatagcttatacataag 41033082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22878247 - 22878165
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    |||||||| |||||||||| |||||| |||  ||||||  || |||| ||||||||||||| |||| ||||| || |||||||    
T  22878247 tttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaaattatgac 22878165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 29633066 - 29633016
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||||| |||||| || ||||| ||| |||||||||||||||||||||||    
T  29633066 tatgaaaacaatttgactttattctattttttgttatagaaataacttata 29633016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 31461423 - 31461377
Alignment:
Q  144 aatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||| || |||||||||||||||||||||||||| |||||| ||||    
T  31461423 aatttgactttattttatcttttgttatagaaatagcttatatataa 31461377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 32364794 - 32364856
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||| |||| |||||| | ||||||||||||   |||||||||||| ||||||||||||    
T  32364794 agcttatacgaaaacaatttaatgttattttatctgaagttatagaaatagcttatacataag 32364856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 32821910 - 32821848
Alignment:
Q  49 actgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttattt 111  Q
    ||||||||| |||| |||  |||| ||||||||||  ||||||||||||| ||||||||||||    
T  32821910 actgtttggaagagtttatagaaacaacttatgacatgtccataagctgttttcagtttattt 32821848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 33576688 - 33576726
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  33576688 ttattgtatcttttgttatagaaataacctatacataag 33576726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 34054995 - 34055033
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  34054995 ttattttatcttttgttatagaaatagcctatacataag 34055033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1633421 - 1633458
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataag 38  Q
    |||||||||||||||||||  |||||||||||||||||    
T  1633421 tttggatttacttatttgagtttatctactagcataag 1633458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5043481 - 5043518
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataag 38  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  5043481 tttggattgacttatttgaccttatctactagcataag 5043518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 5045251 - 5045288
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  5045251 ttattttatcttttgttataaaaatagcttatacataa 5045288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6548038 - 6547973
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagctta 66  Q
    |||||||| |||||||  | ||||||||||||||||||| || |||| |||||||| | |||||||    
T  6548038 tttggattgacttattcaagcttatctactagcataagaacttgtgagactgtttgagggagctta 6547973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 8820368 - 8820405
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  8820368 tattttatcttttgttatataaatagcttatacataag 8820405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 13864626 - 13864589
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  13864626 ttattttaccttttgttatagaaatagcttatacataa 13864589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 29628837 - 29628874
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||||||||| || |||||    
T  29628837 tattttatcttttgttatagaaataacttttatataag 29628874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 29936005 - 29935940
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataaga 192  Q
    |||||||| ||| || |||||| |||||||||||| | ||||||||||||||  |||||| |||||    
T  29936005 atagcttacatggaaacaatttgacgttattttatttgttgttatagaaatagtttatacttaaga 29935940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 31740027 - 31740092
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataac-ttatacataag 191  Q
    |||||||||||||||  | ||| || ||||||||||||| |||||||||||| | |||||||||||    
T  31740027 atagcttatatgaaaatagtttgactttattttatctttagttatagaaatagctttatacataag 31740092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 32694188 - 32694151
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  32694188 ttattttatcttttgatatagaaatagcttatacataa 32694151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 41022209 - 41022176
Alignment:
Q  156 ttttatcttttgttatagaaataacttatacata 189  Q
    |||||||||||||||| |||||||||||||||||    
T  41022209 ttttatcttttgttattgaaataacttatacata 41022176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 44600541 - 44600477
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatctttt--gttatagaaataacttatacataag 191  Q
    ||||||||||||| | |||| || ||||||||||||||  | |||||||||| ||||||||||||    
T  44600541 agcttatatgaaaactatttaactttattttatctttttggctatagaaatagcttatacataag 44600477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 656847 - 656903
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    |||||||| |||| |||||| |   ||||||||||||||||||||||||| ||||||    
T  656847 agcttatacgaaaacaatttgattatattttatcttttgttatagaaatagcttata 656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 5903277 - 5903237
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaa 193  Q
    ||||||||| |||||||||||||||||| ||| ||||||||    
T  5903277 ttattttatattttgttatagaaataacgtatgcataagaa 5903237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 11393430 - 11393498
Alignment:
Q  124 aagatagcttatatgaaagc-aatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||| | ||||| |  ||||| ||||||||| |||||||||| |||||| |||||    
T  11393430 aagatagcttatatgaaaacgaatttgaatttattatatcttttgatatagaaatagcttatagataag 11393498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 11410091 - 11410159
Alignment:
Q  124 aagatagcttatatgaaagc-aatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||| | ||||| |  ||||| ||||||||| |||||||||| |||||| |||||    
T  11410091 aagatagcttatatgaaaacgaatttgaatttattatatcttttgatatagaaatagcttatagataag 11410159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 14209279 - 14209223
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataactta 183  Q
    ||||||||||||||| || ||| |  ||||||||||||||||||| |||||| ||||    
T  14209279 atagcttatatgaaaacagtttgaatttattttatcttttgttattgaaatagctta 14209223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 28902079 - 28902015
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| || ||| |  |||||||| ||| ||||||| ||||| ||||||||||||    
T  28902079 atagcttatatgaaaacagtttaattttattttaacttatgttataaaaatagcttatacataag 28902015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 39622098 - 39622018
Alignment:
Q  3 tggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    ||||||||||||||||| |||||||||| | |||||  || | || |||||||| |||| |||| | ||| ||||||||||    
T  39622098 tggatttacttatttgaacttatctacttgtataagcacttgcgacactgtttgagagaacttatgaaaacaacttatgac 39622018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 41039719 - 41039778
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| ||||||||||     ||||||||||||||| | ||||||| ||||||||||||    
T  41039719 atagcttatataaaagcaattt-----tattttatcttttgtcacagaaatagcttatacataag 41039778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 42420378 - 42420426
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||| |||||||||||||||||| |||| ||||| ||||||| ||||    
T  42420378 caatttaacgttattttatcttttgctataaaaatagcttatacgtaag 42420426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 5e-17; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 507235 - 507158
Alignment:
Q  114 taagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| |||||||||||||||  ||| |||| | || ||||||||||||||||||||||||||| |||||||||||    
T  507235 taagttctccaagatagcttatacaaaaacaatctaactttattttatcttttgttatagaaataatttatacataag 507158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 29274297 - 29274361
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| |||||| || ||||||||||||||| |||||||||| ||||||||||||    
T  29274297 atagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataag 29274361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 24836267 - 24836330
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||| ||||| |||| |||||| || ||||||||||||||||||||||||||||||||||||||    
T  24836267 atagtttatacgaaaacaatttgactttattttatcttttgttatagaaataacttatacataa 24836330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2460072 - 2460154
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    |||||||| |||||||||| |||||  |||||||||||  || |||| |||||||| ||||||||| ||||| ||||||||||    
T  2460072 tttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgac 2460154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 22742368 - 22742302
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaa 193  Q
    ||||||||||||||| |||||| || |||||||||| ||||||||| ||||| |||||| |||||||    
T  22742368 atagcttatatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataagaa 22742302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 33068655 - 33068693
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33068655 ttattttatcttttgttatagaaataacttatacataag 33068693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 2206592 - 2206532
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||||||| ||| |||||  || |||||||||||||||||||| ||||||||||||||    
T  2206592 atagcttatataaaaacaattatactttattttatcttttgttataaaaataacttataca 2206532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 4006716 - 4006652
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| ||| |||||| || |||||||||| ||||||||||||||| ||||| ||||||    
T  4006716 atagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataag 4006652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 9093624 - 9093688
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| |||| |||||| || ||||||||||||||| |||||||||| ||||| ||||||    
T  9093624 atagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataag 9093688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 5554861 - 5554896
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||||||||||||||||||||||||    
T  5554861 attttatcttttgttatagaaataacttatacataa 5554896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 281916 - 281974
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||||||||||||| ||| || || ||||||||||||||||||||| |||| ||||||    
T  281916 atagcttatatgaaaacaagttgactttattttatcttttgttataggaatagcttata 281974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 9559635 - 9559673
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  9559635 ttattttatcttttgctatagaaataacttatacataag 9559673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 31672046 - 31672012
Alignment:
Q  153 ttattttatcttttgttatagaaataacttataca 187  Q
    |||||||||||||||||||||||||||||||||||    
T  31672046 ttattttatcttttgttatagaaataacttataca 31672012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 32917337 - 32917251
Alignment:
Q  10 acttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagct 96  Q
    ||||||| || |||| ||||||| ||||   || |||| |||||||||||||||||| ||||| ||||||||||  |||||||||||    
T  32917337 acttattagagcttacctactagaataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagct 32917251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 20671935 - 20671996
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||| |||| |||||| || ||||||||||||||| | |||||||| |||||||||||    
T  20671935 agcttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataa 20671996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 33736825 - 33736776
Alignment:
Q  142 gcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| || ||||||||| || ||||||||||||||||||||||||||    
T  33736825 gcaatttaactttattttatgttatgttatagaaataacttatacataag 33736776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 34544548 - 34544581
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||||||||||||||||||||||    
T  34544548 tttatcttttgttatagaaataacttatacataa 34544581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 1402998 - 1402942
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataactta 183  Q
    |||||||||||||||  | ||| || |||||||||||||||||||||||||| ||||    
T  1402998 atagcttatatgaaaatagtttaactttattttatcttttgttatagaaatagctta 1402942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 10452428 - 10452492
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||  | ||| |  ||||||||| |||||||||||||||| ||||||||||||    
T  10452428 atagcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataag 10452492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 10616509 - 10616597
Alignment:
Q  48 aactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagttta-ttttataagttccccaagatagcttat 135  Q
    |||| |||||||||||||| ||||| ||||||||||  |||| |||| ||| ||||| ||| ||||||||| || |||| |||||||||    
T  10616509 aactatttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagcttat 10616597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 21959730 - 21959666
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||| || ||| || || ||||||||||||||||||| |||||| ||||||| ||||    
T  21959730 atagcttatatgcaaacaaattgactttattttatcttttgttatggaaatagcttatacttaag 21959666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 31624260 - 31624200
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    |||| ||||| |||| |||||| |  |||||||||||||||||||||||||| ||||||||    
T  31624260 atagattatacgaaaacaatttaaacttattttatcttttgttatagaaatagcttataca 31624200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 191
Target Start/End: Original strand, 4247731 - 4247766
Alignment:
Q  156 ttttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||| ||||||||||||    
T  4247731 ttttatcttttgttatagaaatagcttatacataag 4247766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7148815 - 7148720
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagct 96  Q
    ||||| || |||||||||| |||||||| | |||||||  || |||| | ||||  | |||||||| ||||| ||||||||||| |||||||||||    
T  7148815 tttggtttgacttatttgagcttatctagtcgcataagcacttgtgagagtgttcagcagagcttacggaaacaacttatgacttgtccataagct 7148720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 10728626 - 10728575
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatac 186  Q
    ||||||| |||||| || ||||||||||||||| | ||||||||||||||||    
T  10728626 tatgaaaacaatttaactttattttatcttttgctttagaaataacttatac 10728575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 10749300 - 10749358
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||  ||||| || |||||||||||||| |||||||||| ||||||||||||    
T  10749300 cttatatgaaaataatttaactttattttatcttttattatagaaat-acttatacataa 10749358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 12631587 - 12631548
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataagaa 193  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  12631587 tattttatctttggttatagaaatagcttatacataagaa 12631548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 31461651 - 31461616
Alignment:
Q  156 ttttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||| ||||||||||||    
T  31461651 ttttatcttttgttatagaaatagcttatacataag 31461616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 33787817 - 33787876
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||| |||||| || || |||||| ||||||||||||||||  ||||||||||    
T  33787817 cttatatgaaatcaatttgactttgttttatattttgttatagaaatagtttatacataa 33787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 2514678 - 2514640
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  2514678 ttattttatcttttattatagaaatagcttatacataag 2514640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 4248944 - 4248874
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    |||||| || ||||||||||||||||||| |||||| |||||| ||||| |  ||||||| |||| |||||    
T  4248944 caatttgactttattttatcttttgttattgaaatagcttatatataagcacttatatgacaagcgcttat 4248874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 183
Target Start/End: Complemental strand, 5328950 - 5328920
Alignment:
Q  153 ttattttatcttttgttatagaaataactta 183  Q
    |||||||||||||||||||||||||||||||    
T  5328950 ttattttatcttttgttatagaaataactta 5328920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 7714025 - 7713963
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||| |||||| || |||||||||||||||||||  || ||  |||||||||||    
T  7714025 agcttatatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataag 7713963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 9027678 - 9027616
Alignment:
Q  50 ctgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttatttt 112  Q
    |||||||  |||||||| ||||||||||||||||  ||||||||| ||| ||||| |||||||    
T  9027678 ctgtttgaaagagcttatggaaataacttatgacatgtccataagttgttttcagcttatttt 9027616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 10836793 - 10836759
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||| ||||||||||||||||    
T  10836793 tttatcttttgttatagatataacttatacataag 10836759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 27889937 - 27889975
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  27889937 ttattttatctgttgttatagaaataacttgtacataag 27889975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 28531635 - 28531669
Alignment:
Q  153 ttattttatcttttgttatagaaataacttataca 187  Q
    |||||||||||||||||||| ||||||||||||||    
T  28531635 ttattttatcttttgttatataaataacttataca 28531669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 29940796 - 29940734
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||| |||||| ||| || || |||||||||||||||||||||||| | ||||||| ||||    
T  29940796 agcttaaatgaaaacaaattgactttattttatcttttgttatagaaaaagcttatacttaag 29940734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 33116578 - 33116544
Alignment:
Q  156 ttttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| |||||||||||||||||||    
T  33116578 ttttatcttttgttaaagaaataacttatacataa 33116544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 1344235 - 1344272
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataag 191  Q
    ||||| || |||||||||||||||||||||||||||||    
T  1344235 tatttaatgttttgttatagaaataacttatacataag 1344272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 2205624 - 2205694
Alignment:
Q  113 ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||| || ||||||||||||||  |||| |||||| || || |||||||||||||| |||||||| ||||||    
T  2205624 ataagctctccaagatagcttat--gaaaacaatttgactttgttttatcttttgttttagaaatagcttata 2205694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 4420593 - 4420556
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||||||||||| || |||||||||||    
T  4420593 ttattttatcttttgttatagaagtagcttatacataa 4420556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 6647360 - 6647327
Alignment:
Q  158 ttatcttttgttatagaaataacttatacataag 191  Q
    |||| |||||||||||||||||||||||||||||    
T  6647360 ttattttttgttatagaaataacttatacataag 6647327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 9582670 - 9582711
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttata 172  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||    
T  9582670 cttatataaaaacaatttcactttattttatcttttgttata 9582711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12111116 - 12111079
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataag 38  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  12111116 tttggattgacttatttgagcttatctactagcataag 12111079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 24476601 - 24476540
Alignment:
Q  130 gcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||  ||||| ||   ||||||||||||| |||||||||| ||||||||||||    
T  24476601 gcttatatgaaaataatttaactacattttatcttttgctatagaaatagcttatacataag 24476540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 24782057 - 24782004
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    ||||||||||| |||||| |  | |||||||||||||||||||||||| |||||    
T  24782057 cttatatgaaaacaatttgatttgattttatcttttgttatagaaatagcttat 24782004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32205934 - 32205971
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataag 38  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  32205934 tttggattgacttatttgaccttatctactagcataag 32205971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 32975954 - 32975917
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  32975954 ttattttatattttgttacagaaataacttatacataa 32975917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 33259788 - 33259727
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttatattat 218  Q
    |||||||||||||||| ||||| |||||||||||| |  |||||| ||||| ||||| ||||    
T  33259788 tttatcttttgttataaaaatagcttatacataagcacttatatgtaaagctcttatcttat 33259727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 33416360 - 33416323
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  33416360 tattttatcttttgttataaaaatagcttatacataag 33416323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 33500579 - 33500612
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||| |||||||||||    
T  33500579 tttatcttttgttatagaaatagcttatacataa 33500612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 34429784 - 34429821
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||| || |||||||||||||||||||||||    
T  34429784 ttattttatctcttattatagaaataacttatacataa 34429821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 6654589 - 6654553
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataag 191  Q
    |||||||  ||||||||||||||||||||||||||||    
T  6654589 attttattatttgttatagaaataacttatacataag 6654553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 7354180 - 7354120
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    ||||||||||||||||||||||||||  |||||||| | ||  | ||||||||||| ||||    
T  7354180 ttattttatcttttgttatagaaatagtttatacatgaaaacttgtatgaaaagcatttat 7354120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 8349736 - 8349792
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||| ||| |||||| || |||||||||||||||||| |||||||  |||||||    
T  8349736 cttatataaaaacaatttaactttattttatcttttgttagagaaatagtttataca 8349792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 11340693 - 11340757
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||| |||||||||  || || || ||||||||||||||||||||||| || |||||| |||||    
T  11340693 atagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataag 11340757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 20370875 - 20370839
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacata 189  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  20370875 ttattttatcttttgttataaaaatagcttatacata 20370839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 27857464 - 27857412
Alignment:
Q  44 gtgaaactgtttgggagagcttagggaaataacttatgactagtccataagct 96  Q
    ||||||||||||||||||||||| | ||| ||||||||||   ||||||||||    
T  27857464 gtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataagct 27857412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 31668781 - 31668817
Alignment:
Q  155 attttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  31668781 attttatgttttgttatagaaatagcttatacataag 31668817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35070388 - 35070448
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggaga 61  Q
    ||||||||| ||||||||| ||||||||||| ||||||  || |||  |||||||||||||    
T  35070388 tttggattttcttatttgagcttatctactaacataagcacttgtgggactgtttgggaga 35070448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 27578 - 27514
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| |||||||||| |||||| || |||||||||||| ||||||||||||||||||||||||||    
T  27578 atagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataag 27514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 21348 - 21410
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||| |||| |||||| || ||||||||||||||  |||| ||||| ||||||||||||    
T  21348 agcttatacgaaaacaatttaactttattttatcttttcctataaaaatagcttatacataag 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 88)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 49517072 - 49517012
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    |||||||| |||||| |||||| || |||||||||||||||||||||||||||||||||||    
T  49517072 atagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttataca 49517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 15360896 - 15360833
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| || ||| || ||||||||||||||||||||||||||||| ||||||||    
T  15360896 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataa 15360833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 45999356 - 45999417
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    |||||||||||||||||| ||| || |||| ||||||||||||||||||||| |||||||||    
T  45999356 atagcttatatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacat 45999417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 4200231 - 4200168
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| ||| || || |||||||||||||||||||| |||||||||||| ||||    
T  4200231 atagcttatatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataa 4200168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 17269249 - 17269174
Alignment:
Q  130 gcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaa 205  Q
    |||||||||||| |||||| || |||||||  |||||||| ||||||||||||||||||||| |  ||||||||||    
T  17269249 gcttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttatatgaaaa 17269174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 7274015 - 7274093
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    ||||||| |||||| || |||||| ||||||||||||| ||||||| |||||||||| |  ||||||| ||||||||||    
T  7274015 tatgaaaacaatttgactttatttcatcttttgttataaaaataacatatacataagcatttatatgataagcacttat 7274093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 36641860 - 36641802
Alignment:
Q  144 aatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatga 202  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||| || |||||||    
T  36641860 aatttgactttattttatcttttgttatagaaataacttatatataagtaattatatga 36641802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 27140485 - 27140424
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||| ||| |||||| |  ||||||||||||||||||||||||||||||| ||||||    
T  27140485 agcttatataaaaacaatttaatattattttatcttttgttatagaaataacttacacataa 27140424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 14737781 - 14737829
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataactta 183  Q
    ||||||| |||||| || |||||||||||||||||||||||||||||||    
T  14737781 tatgaaaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 34619446 - 34619510
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||  ||| |||||| || |||||||||||||||||||||||||  ||||||||||||    
T  34619446 atagcttatacaaaaacaatttaaccttattttatcttttgttatagaaatggcttatacataag 34619510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 49557143 - 49557083
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    |||||||| |||||  | |||| || |||||||||||||||||||||||||||||||||||    
T  49557143 atagcttaaatgaatactatttaactttattttatcttttgttatagaaataacttataca 49557083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 50319286 - 50319230
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||| ||| || || |||||||||||||||||||||||||| ||||||||||||    
T  50319286 tatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacataag 50319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 12564468 - 12564555
Alignment:
Q  49 actgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttattt-tataagttccccaagatagcttat 135  Q
    |||||||||||||||||| | | ||| |||||||| |||| ||||| ||| ||||| ||||||  |||||||| ||||||||||||||    
T  12564468 actgtttgggagagcttacgtatatagcttatgacaagtcaataagttgttttcagcttatttccataagttctccaagatagcttat 12564555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 29793986 - 29794076
Alignment:
Q  122 ccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    |||| ||||||||| ||||| |||||| || |||||||||||||||||| | ||||| | |||||||||  | ||||||||||| |||||||    
T  29793986 ccaaaatagcttatttgaaaacaatttgac-ttattttatcttttgttacaaaaatagcctatacataaacacatatatgaaaaacacttat 29794076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 31517808 - 31517859
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    ||||||||||||||| |||||| || ||||||||||||||||| ||||||||    
T  31517808 atagcttatatgaaatcaatttaactttattttatcttttgttgtagaaata 31517859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 36151577 - 36151636
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||| |||| |||||| || ||||||||||||||||||| |||||| |||||||||||    
T  36151577 cttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 44032067 - 44032130
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| |||||| || |||||||| |||||||||||||||   |||||||||||    
T  44032067 atagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataa 44032130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 48830144 - 48830207
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||  | ||| || ||||||||||||| || |||||||||||||||||||||    
T  48830144 atagcttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataa 48830207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10199330 - 10199440
Alignment:
Q  2 ttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtatt 101  Q
    ||||||| |||||||||| ||||||||||| ||||||  || |||| ||| ||||||||| || | | ||||| ||||||||  || |||||| ||| ||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataagttgtttt 10199429  T
Q  102 cagtttatttt 112  Q
    ||| |||||||    
T  10199430 cagcttatttt 10199440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 11211116 - 11211062
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    |||||||||||  ||||| || ||||||||||||||||| |||||||||||||||    
T  11211116 cttatatgaaaaaaatttaactttattttatcttttgttctagaaataacttata 11211062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5157221 - 5157140
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatga 82  Q
    |||||||| |||||||||| |||||||||   |||||   || |||||||||||||||||||||||  |||| |||||||||    
T  5157221 tttggattgacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaacaacttatga 5157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 9572176 - 9572237
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||  |||||||||| || ||||||||||||||| |||||||||| || ||||||    
T  9572176 atagcttatacaaaagcaatttaactttattttatcttttgctatagaaatagctaatacat 9572237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 15579610 - 15579521
Alignment:
Q  22 ttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttattt 111  Q
    |||||||||||||||||| || |  | |||||||||||||||||  ||||| ||||||||||  ||||||||| |||  |||| ||||||    
T  15579610 ttatctactagcataagaacttgcaagactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgttctcagcttattt 15579521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 23895312 - 23895275
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||||||| |||||||||||    
T  23895312 ttattttatcttttgttatagaaatagcttatacataa 23895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 27738248 - 27738297
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaa 176  Q
    ||||||||||||||| |||||| || ||||||||||||||||| ||||||    
T  27738248 atagcttatatgaaaacaatttgactttattttatcttttgttgtagaaa 27738297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 45990126 - 45990187
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||||||| |||||| || ||||||||||||||| |||| ||||| | |||||||    
T  45990126 atagcttatatgaaaacaattttactttattttatcttttgatataaaaatagcatatacat 45990187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 202
Target Start/End: Original strand, 48748648 - 48748725
Alignment:
Q  122 ccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatga 202  Q
    ||||||||||||||  |||| |||||| || |||||| ||||||||| ||||||||| |||||||||||| | ||||||||    
T  48748648 ccaagatagcttat--gaaaacaatttaactttatttcatcttttgt-atagaaatagcttatacataagcacatatatga 48748725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 1879090 - 1879150
Alignment:
Q  122 ccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataactt 182  Q
    |||||| ||||||||||||| || ||| || |||||||||||| |||||||||||| ||||    
T  1879090 ccaagacagcttatatgaaaacattttgactttattttatcttctgttatagaaatgactt 1879150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 4549852 - 4549804
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||| || |||||||||||||||||||||||||| ||| ||||||||    
T  4549852 caatttaactttattttatcttttgttatagaaatagcttgtacataag 4549804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 23544708 - 23544772
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| |||||| || | ||||||||||||   ||||||||| ||||||||||||    
T  23544708 atagcttatatgaaaacaatttgacttaattttatctttttccatagaaatagcttatacataag 23544772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 29007784 - 29007848
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||  | ||| || ||| ||| ||||||||||||||||||||||| |||||||    
T  29007784 atagcttatatgaaaatagtttgactttaatttttcttttgttatagaaataacttagacataag 29007848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 30259555 - 30259619
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| |||||| ||| || ||||||||| |||||||||||||||| ||| | ||||||    
T  30259555 atagcttatatcaaagcagtttgactttattttatattttgttatagaaatagcttgtgcataag 30259619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 41163072 - 41163136
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| ||||||||||| || | |||||||||||||  ||| |||||||| |||||||||    
T  41163072 atagcttatacgaaagcaatttaacttcattttatcttttgcaataaaaataactcatacataag 41163136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 44936658 - 44936722
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||  | ||| || |||| ||||||||||||||||||||||||| ||| ||||    
T  44936658 atagcttatatgaaaatagtttgactttatcttatcttttgttatagaaataacttctacttaag 44936722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 50998554 - 50998490
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||| | ||| |  || ||||||||||||||| ||||||| ||||||||||||    
T  50998554 atagcttatatgaaagtagtttgattttgttttatcttttgttacagaaatagcttatacataag 50998490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 192
Target Start/End: Original strand, 172671 - 172710
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataaga 192  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  172671 ttatgttatcttttgttatagaaatagcttatacataaga 172710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 4256110 - 4256173
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||| ||||  ||||| || ||||| ||||||||||| |||||||| |||||||||||    
T  4256110 atagcttatacgaaaataatttaactttattgtatcttttgttgtagaaatagcttatacataa 4256173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 6074476 - 6074417
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatac 186  Q
    ||||||||||||||| || ||| || |||| | ||||||||||||||||||| |||||||    
T  6074476 atagcttatatgaaaacagtttaactttatatcatcttttgttatagaaatagcttatac 6074417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 13037836 - 13037781
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcactta 212  Q
    |||||||||||||||||||||| |||||||||||| |  ||||||| ||| |||||    
T  13037836 tttatcttttgttatagaaatagcttatacataagcacttatatgacaagaactta 13037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 15687142 - 15687205
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||| |||| |||||| || ||||||||| |||||||||||||||| ||| ||| ||||    
T  15687142 tagcttatacgaaaacaatttaactttattttatattttgttatagaaatagcttgtacttaag 15687205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 16982020 - 16982067
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||| ||| ||||||||||||||||||| ||||||| ||||||||||    
T  16982020 caattccactttattttatcttttgttatcgaaataagttatacataa 16982067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 18434546 - 18434597
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    ||||||||||||| |||| ||| || ||||||||||||||||||| ||||||    
T  18434546 atagcttatatgagagcagtttgactttattttatcttttgttatggaaata 18434597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 26630465 - 26630414
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    ||||||||||||||| |||||| || |||||| || ||||||||||||||||    
T  26630465 atagcttatatgaaaacaattttactttatttcattttttgttatagaaata 26630414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 37818437 - 37818402
Alignment:
Q  156 ttttatcttttgttatagaaataacttatacataag 191  Q
    |||||||| |||||||||||||||||||||||||||    
T  37818437 ttttatctcttgttatagaaataacttatacataag 37818402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 38651461 - 38651541
Alignment:
Q  109 ttttataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||| || ||| ||||||||||  |||| |||||  || ||| ||||||||||||||||||| || ||||||||||||    
T  38651461 ttttataagctctccaggatagcttat--gaaaacaattcgactttagtttatcttttgttatagaattagcttatacataag 38651541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 39777665 - 39777614
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    ||||||| |||||||||| ||| || ||||| ||||||||||||||||||||    
T  39777665 atagcttgtatgaaagcagtttgactttattctatcttttgttatagaaata 39777614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 172317 - 172279
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  172317 ttattttatctttagttatagaaatagcttatacataag 172279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 1662712 - 1662630
Alignment:
Q  11 cttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataa 93  Q
    ||||||||| ||||||||||||||||||  |  | || ||| |||| ||||||||| ||||| ||||||||||  ||||||||    
T  1662712 cttatttgagcttatctactagcataagtacatgcgagactatttgcgagagcttacggaaacaacttatgacatgtccataa 1662630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 4202227 - 4202261
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||||||| ||||    
T  4202227 tttatcttttgttatagaaataacttatacttaag 4202261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 4700160 - 4700198
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  4700160 ttattttatcttttgttatagaaatagcttgtacataag 4700198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 6976924 - 6976886
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  6976924 ttatcttatcttttgttatagaaatatcttatacataag 6976886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 25479583 - 25479525
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||| ||||||||  |||||| |||||||||||||||| |||||||||| | ||||||    
T  25479583 atagcctatatgaagacaatttgacgttattttatctttggttatagaaagatcttata 25479525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28467582 - 28467500
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    |||||||| ||||||||||  |||| ||||||||| ||  ||  ||| ||| |||||||||| ||| ||||||||||||||||    
T  28467582 tttggattgacttatttgagtttatttactagcattagcacttatgagactatttgggagagattatggaaataacttatgac 28467500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 190
Target Start/End: Original strand, 37593678 - 37593800
Alignment:
Q  74 aacttatgactagtccataagctgtattcagtttatttt-ataagttccccaagatagcttat-----atgaaagcaatttcacgttattttatcttttg 167  Q
    ||||||||||  || |||||||||| ||||| ||||||| ||||| ||  ||| |||||||||     | |||| |||| | || |||||||||||| ||    
T  37593678 aacttatgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagcttatgaaatacgaaaacaatctaacattattttatcttgtg 37593777  T
Q  168 ttatagaaataacttatacataa 190  Q
    ||||||||||| |||||||||||    
T  37593778 ttatagaaataccttatacataa 37593800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 42169636 - 42169674
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  42169636 ttattttatcttctgttatagaaataacttatagataag 42169674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 43372027 - 43372113
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    ||||||||| |||||  ||||| ||  |||||||||| |||||||||||||| | ||||||||||  | ||||||| |||| |||||    
T  43372027 atagcttatgtgaaaataatttgactctattttatctattgttatagaaatagcctatacataagccattatatgataagcgcttat 43372113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 45769837 - 45769875
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  45769837 ttattttatcttttgttatagaaataatttacacataag 45769875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 46499924 - 46499986
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||| || ||| |||||| || |||||||||||||| ||||||||||| |||||| |||||    
T  46499924 agcttaaataaaaacaatttgactttattttatcttttcttatagaaatagcttatagataag 46499986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 4777379 - 4777412
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatac 186  Q
    ||||||||||||||| ||||||||||||||||||    
T  4777379 ttattttatcttttgctatagaaataacttatac 4777412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6659829 - 6659764
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagctta 66  Q
    |||||||| |||||||| | ||||||||||||||||||  || |||| ||| ||||||| ||||||    
T  6659829 tttggattgacttattttagcttatctactagcataagcacttgtgagactatttgggatagctta 6659764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9507380 - 9507315
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagctta 66  Q
    |||| |||| ||||||||| |||||||||||||||| |   | |||| ||||||||||||||||||    
T  9507380 tttgaatttgcttatttgagcttatctactagcataggcatttgtgagactgtttgggagagctta 9507315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 15709977 - 15709916
Alignment:
Q  22 ttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    |||||||||||||||||  ||  ||| ||||||||||||| |||| ||||||| ||||||||    
T  15709977 ttatctactagcataagcacttttgagactgtttgggagaacttacggaaatagcttatgac 15709916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 23370369 - 23370430
Alignment:
Q  130 gcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||| ||  ||||| || ||||||||||||| ||||||||| ||||||| ||||    
T  23370369 gcttatatgaaaccagcttcactttgttttatcttttgtaatagaaatagcttatacgtaag 23370430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 191
Target Start/End: Original strand, 24146362 - 24146391
Alignment:
Q  162 cttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||||||||||    
T  24146362 cttttgttatagaaataacttatacataag 24146391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 25707136 - 25707099
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  25707136 ttattttatcttttgttatagaaatatcttatagataa 25707099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 28689421 - 28689514
Alignment:
Q  49 actgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttatttt-ataagttccccaagatagcttatatgaaa 141  Q
    |||||||  |||| |||| ||||| | ||||||||  ||||||||| ||| ||||| ||||||| ||||| |  ||||||||||||||||||||    
T  28689421 actgttttagagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaa 28689514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 30371150 - 30371105
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttata 172  Q
    ||||||||||||||| |||||| |  ||||||||||||||||||||    
T  30371150 atagcttatatgaaaacaatttgagtttattttatcttttgttata 30371105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 31517671 - 31517772
Alignment:
Q  11 cttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttatt 110  Q
    ||||||||| ||||| |||| |||||||  || |||| ||||||||||||| ||||   ||| |||| |||||  || |||||||||| ||||| |||||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttatt 31517770  T
Q  111 tt 112  Q
    ||    
T  31517771 tt 31517772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 39803970 - 39804015
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    |||||| || ||||||| ||||||||| ||||||||||||||||||    
T  39803970 caatttgactttattttgtcttttgttgtagaaataacttatacat 39804015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 40304126 - 40304207
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcactta 212  Q
    ||||||||||| |||| | |  |||||||||||||||||||| ||||| ||||||| |||| ||  |||||| || ||||||    
T  40304126 cttatatgaaaacaatgtgattttattttatcttttgttatataaatagcttatacctaagcaataatatgataaacactta 40304207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 40357963 - 40358016
Alignment:
Q  136 atgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    |||||| |||||| || ||||||||||  |||||||||||||| ||||||||||    
T  40357963 atgaaaacaatttgactttattttatccattgttatagaaatagcttatacata 40358016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 42556699 - 42556760
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||| |||| | ||| |  |||||| ||||||||| |||||||||||||||||||    
T  42556699 atagcttatataaaagtagtttgattttatttcatcttttgtcatagaaataacttatacat 42556760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 43333701 - 43333640
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||||||| || ||  || ||||||||| |||| || ||||||||||||||||||    
T  43333701 atagcttatatgaaaccagttcgactttattttatattttcttctagaaataacttatacat 43333640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 49692144 - 49692181
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  49692144 ttattttatcctttattatagaaataacttatacataa 49692181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 3063002 - 3062939
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| |||||| ||| |||||| || ||||||||||||||||| ||| |||||| ||||||||||    
T  3063002 atagtttatataaaaacaatttgacattattttatcttttgttgtag-aataacctatacataag 3062939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 7707194 - 7707158
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  7707194 tattttatcttttgttatcgaaataacttatatataa 7707158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 9656652 - 9656600
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataa 179  Q
    |||||||||||||||  ||||| || ||||||||| ||||| |||||||||||    
T  9656652 atagcttatatgaaaataatttaactttattttattttttgctatagaaataa 9656600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 9777859 - 9777827
Alignment:
Q  153 ttattttatcttttgttatagaaataacttata 185  Q
    |||||||||||||||||||| ||||||||||||    
T  9777859 ttattttatcttttgttataaaaataacttata 9777827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 17423006 - 17423070
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatc-ttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||| ||  || || |||||||||| |||||||||||||| | |||||||||||    
T  17423006 atagcttatatgaaatcagcttgactttattttatcgttttgttatagaaaaagcttatacataa 17423070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 28467376 - 28467420
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttata 172  Q
    ||||||||||||||  ||||| || ||||||||||||||||||||    
T  28467376 tagcttatatgaaaataatttgactttattttatcttttgttata 28467420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 29793784 - 29793720
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| |||| ||| || || |||| |||||||||||| |||||||| ||| ||||||||    
T  29793784 atagcttatacgaaaacaacttaactttatgttatcttttgttgtagaaatagcttgtacataag 29793720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 31294616 - 31294652
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||||||||||||| || ||||||||    
T  31294616 tattttatcttttgttatagaaatagctaatacataa 31294652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 33527215 - 33527279
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||| |||||||||| || ||| ||  |||||||||||||||| |||||||| ||||| ||||||    
T  33527215 atagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcataag 33527279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 38578529 - 38578469
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||||||  |||  ||||| || |||| ||||||||||||||||||||| ||||||||    
T  38578529 atagcttatacaaaaataatttaactttatgttatcttttgttatagaaatagcttataca 38578469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 43722383 - 43722447
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| | || |||||  || |||||||||||| ||||||| ||||| ||||||||||||    
T  43722383 atagcttatacggaaccaattgaactttattttatcttctgttatataaatagcttatacataag 43722447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 44422800 - 44422712
Alignment:
Q  49 actgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttatttt-ataagttccccaagatagcttata 136  Q
    ||||| |||||||||||| | ||||| ||||||||  ||||||||||||  | ||| ||||||| ||||| || ||| |||||||||||    
T  44422800 actgtctgggagagcttatgaaaatagcttatgacatgtccataagctgactacagcttattttcataagctctccaggatagcttata 44422712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 47877124 - 47877072
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataa 179  Q
    |||| |||||||||| |||||| |  ||||||||||||||||||| |||||||    
T  47877124 atagtttatatgaaaacaatttgattttattttatcttttgttattgaaataa 47877072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 52286680 - 52286616
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||    ||| || ||||||||||||||||| |||||||| ||||| ||||||    
T  52286680 atagcttatatgaaaattgtttaactttattttatcttttgttgtagaaatatcttattcataag 52286616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 9e-16; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 44 - 193
Target Start/End: Complemental strand, 14949972 - 14949824
Alignment:
Q  44 gtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtattcagtttattt-tataagttccccaagatagcttatatgaaag 142  Q
    |||| ||||||| |||||||||| | ||||||||||||||  ||||||||||||| ||||| |||||| |||||  ||   | |||||||  |||||||     
T  14949972 gtgagactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagct--tatgaaaa 14949875  T
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacataagaa 193  Q
     | ||| ||  |||||||||||||||||||||| || ||||||||||||||    
T  14949874 gagtttgactctattttatcttttgttatagaagtagcttatacataagaa 14949824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4055537 - 4055647
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtat 100  Q
    ||||||||| ||||||||| ||||||| |||  ||||  ||| || |||||||||||||||| |||  |||||||||||||||  |||||||| |||| |    
T  4055537 tttggattttcttatttgaacttatctgctattataaatgcttgtaaaactgtttgggagagtttatagaaataacttatgacatgtccataaactgttt 4055636  T
Q  101 tcagtttattt 111  Q
    |||| ||||||    
T  4055637 tcagcttattt 4055647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 1470924 - 1470985
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    |||||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||    
T  1470924 atagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 1112855 - 1112791
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||| ||||| |||||| || |||||||||||||||||||||||||| | ||||||||||    
T  1112855 atagcttatgtgaaaacaatttaaccttattttatcttttgttatagaaatagcatatacataag 1112791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 42597403 - 42597339
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||  |||||| |||||| || |||||||||||||||||||||||||| ||||||||||||    
T  42597403 atagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatacataag 42597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 12361194 - 12361130
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| |||||| || | |||||||||||  |||||||||||||||||| |||||    
T  12361194 atagcttatatgaaaacaatttgacttcattttatctttatttatagaaataacttatatataag 12361130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 32507036 - 32506996
Alignment:
Q  150 acgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  32507036 acgttattttatcttttgttgtagaaataacttatacataa 32506996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 4558800 - 4558737
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||| |||||||||  ||||| || |||||||||||||| ||||||||||| |||||||||||    
T  4558800 atagcatatatgaaaataatttaactttattttatcttttattatagaaatagcttatacataa 4558737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 14482188 - 14482121
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcact 210  Q
    |||||| || ||||||||||||||||||||||||||  ||||||||||| |  ||||||| |||||||    
T  14482188 caatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcact 14482121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 39866740 - 39866803
Alignment:
Q  86 gtccataagctgtattcagtttatttt-ataagttccccaagatagcttatatgaaagcaattt 148  Q
    ||||||||||||| ||||||||||||| ||||| ||  ||||||||||||||||||| ||||||    
T  39866740 gtccataagctgttttcagtttattttcataagctcttcaagatagcttatatgaaaacaattt 39866803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 11188249 - 11188287
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  11188249 ttattttatcttttgttatagaaacaacttatacataag 11188287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 14280467 - 14280533
Alignment:
Q  125 agatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||| |||||| |  | ||||||||||||| ||||||||||  |||||||||||    
T  14280467 agatagcttatatgaaaacaatttaatttaattttatcttttgctatagaaataggttatacataag 14280533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 26215472 - 26215434
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  26215472 ttattttatcttttgttatagaaatagcttatacataag 26215434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 29699230 - 29699192
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  29699230 ttattttatcttttgttatagaaataacttgtacataag 29699192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 31884596 - 31884534
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    ||||||||||||||| |||||  |  | ||||||| |||||||||||||||||||||||||||    
T  31884596 atagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacata 31884534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 37444485 - 37444547
Alignment:
Q  129 agcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||| |||| |||||| || ||| ||||||||||||||||| |||| ||||||||||||    
T  37444485 agcttatacgaaaacaatttaactttactttatcttttgttatagtaatagcttatacataag 37444547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 40280281 - 40280331
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||||| |||||| || ||||||||||||||||| |||||||||||||||    
T  40280281 tatgaaaacaattttactttattttatcttttgttgtagaaataacttata 40280331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 9928228 - 9928195
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||||||||||||||||||||||    
T  9928228 tttatcttttgttatagaaataacttatacataa 9928195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 10939383 - 10939346
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||||| |||||||||||||||||||||    
T  10939383 ttattttatcttttgtaatagaaataacttatacataa 10939346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 26820175 - 26820142
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatac 186  Q
    ||||||||||||||||||||||||||||||||||    
T  26820175 ttattttatcttttgttatagaaataacttatac 26820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 42237490 - 42237535
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttata 172  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||    
T  42237490 atagcttatatgaaaacaatttaactttattttatcttttgttata 42237535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 3537099 - 3537159
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    |||||||||| |||| |||||| || ||||||||||||||| |||||||||  ||||||||    
T  3537099 atagcttatacgaaaacaatttgactttattttatcttttgctatagaaattgcttataca 3537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 9700150 - 9700039
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaat-aacttatgactagtccataagctgta 99  Q
    |||||||| |||||||||| |||||||||||||||||   || |||| ||| |||| |||||||| | ||||| || |||||||  |||||||||||||     
T  9700150 tttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagctt-gtgaaatcaatttatgacatgtccataagctgtt 9700052  T
Q  100 ttcagtttatttt 112  Q
    ||||  |||||||    
T  9700051 ttcaccttatttt 9700039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 13652213 - 13652153
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| ||||||||| | |||  |||||||| |||||||||| ||||||||||||    
T  13652213 cttatatgaaaacaatttcacttcattccatcttttgctatagaaatagcttatacataag 13652153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 13710856 - 13710796
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||| ||||||||| | |||  |||||||| |||||||||| ||||||||||||    
T  13710856 cttatatgaaaacaatttcacttcattccatcttttgctatagaaatagcttatacataag 13710796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 33553389 - 33553200
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgactagtccataagctgtat 100  Q
    ||||||||  ||||||||| ||||||||  | ||||||  || ||||  |||||||| ||||||||  |||  ||||||||||  |||| ||||||||      
T  33553389 tttggattagcttatttgagcttatctatcaacataagcacttgtgatgctgtttggaagagcttattgaagcaacttatgacatgtccctaagctgttc 33553290  T
Q  101 tcagtttatttt-ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
     ||| ||||||  ||||| ||  |||||||||||||  |||| |||||| || |||||||||||| ||| ||| |||||||| | |||||||    
T  33553289 ccagcttatttccataagctcttcaagatagcttat--gaaaacaatttgactttattttatcttatgtcatataaataactcacacataag 33553200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 7514579 - 7514516
Alignment:
Q  128 tagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||| |||||  || ||||||||  ||||| |||||||||| ||||||||||||    
T  7514579 tagcttatatgaaaacaattgaacattattttagtttttgctatagaaatagcttatacataag 7514516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 31915345 - 31915400
Alignment:
Q  135 tatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||| |||||| || ||||| |||||||||||||||| ||| |||||||||||    
T  31915345 tatgaaaacaatttgactttattctatcttttgttatagatatagcttatacataa 31915400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 35374441 - 35374492
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaata 178  Q
    ||||||||||||||| |||||| || ||||||||||||| | ||||||||||    
T  35374441 atagcttatatgaaaacaatttaactttattttatctttcgctatagaaata 35374492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 184
Target Start/End: Original strand, 40728512 - 40728543
Alignment:
Q  153 ttattttatcttttgttatagaaataacttat 184  Q
    ||||||||||||||||||||||||||||||||    
T  40728512 ttattttatcttttgttatagaaataacttat 40728543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 1561251 - 1561217
Alignment:
Q  157 tttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||| |||||||||||||||||||||||||    
T  1561251 tttatctttcgttatagaaataacttatacataag 1561217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 1930027 - 1929989
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  1930027 ttattttatctttttctatagaaataacttatacataag 1929989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 2364538 - 2364604
Alignment:
Q  124 aagatagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||||||||||||  |||| ||||| || ||||||||||||||| |||| ||||| | |||||||||    
T  2364538 aagatagcttatacaaaagaaatttgactttattttatcttttgctataaaaatagcgtatacataa 2364604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 6526267 - 6526309
Alignment:
Q  143 caatttcacgttattttatcttttgttatagaaataacttata 185  Q
    ||||||||| |||||||||||| ||||||||| ||||||||||    
T  6526267 caatttcactttattttatcttctgttatagagataacttata 6526309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 7714218 - 7714180
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  7714218 ttattttatcttttgttatagatgtaacttatacataag 7714180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 9699998 - 9699940
Alignment:
Q  132 ttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataa 190  Q
    |||| ||||| |||||| || |||||||| |||||||||| |||||| |||||||||||    
T  9699998 ttatttgaaaacaatttgaccttattttaacttttgttatcgaaatagcttatacataa 9699940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 10114466 - 10114428
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  10114466 ttattttatcttttgctatagaaatagcttatacataag 10114428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 11000629 - 11000687
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttata 185  Q
    |||||||||  |||| |||||| || ||||||||||||||||||| |||||| ||||||    
T  11000629 atagcttattcgaaaacaatttgactttattttatcttttgttatggaaatagcttata 11000687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 11119093 - 11119131
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  11119093 ttattttatcttttgttatagaaatatcgtatacataag 11119131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 12224993 - 12225031
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  12224993 ttattttatcttttgtcttagaaataacttatacataag 12225031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 18356295 - 18356237
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcactt 211  Q
    ||||||||||||||| |||||||| |||||| ||||||| || ||||||| ||| ||||    
T  18356295 ttattttatcttttgctatagaaacaacttacacataagcaattatatgataagtactt 18356237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 20672824 - 20672729
Alignment:
Q  76 cttatgactagtccataagctgtattcagtttatttt-ataagttccccaagatagcttatatgaaagcaatttcacgttattttatcttttgttata 172  Q
    ||||||||  || |||||||||| ||||| ||||||| ||||| || ||| |||||||||||  ||| || ||| || ||||||||||||||||||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttata--aaaacagtttgactttattttatcttttgttata 20672729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 24326167 - 24326109
Alignment:
Q  14 atttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaa 72  Q
    |||||| |||||||||| |||||||  || |||| |||||||||||||||||| |||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaa 24326109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40071898 - 40071816
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    |||||||| |||| ||||| ||||||| ||| |||| || |  |||| | |||||||||||||||| ||||| ||||||||||    
T  40071898 tttggattgacttctttgagcttatctcctaccatatgaacatgtgagagtgtttgggagagcttatggaaacaacttatgac 40071816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 3945250 - 3945213
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataa 190  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  3945250 ttattttatcttttgttattgaaataacttatatataa 3945213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 7026729 - 7026688
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttata 172  Q
    ||||||||||| |||||| || ||||||||||||||||||||    
T  7026729 cttatatgaaaacaattttactttattttatcttttgttata 7026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 16210954 - 16211015
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacat 188  Q
    ||||||||||||||| |||| | || |||||||||| |||  |||||||||| |||||||||    
T  16210954 atagcttatatgaaaacaatgtaactttattttatcatttactatagaaatagcttatacat 16211015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18331863 - 18331826
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataag 38  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  18331863 tttggattgacttatttgatcttatctactaacataag 18331826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43368621 - 43368658
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataag 38  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  43368621 tttggattgacttatttgatcttatctactaacataag 43368658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 1664509 - 1664453
Alignment:
Q  10 acttatttgatcttatctactagcataagagctggtgaaactgtttgggagagctta 66  Q
    ||||||||||  ||||||||||||||||   || |||| ||||||||||||||||||    
T  1664509 acttatttgagtttatctactagcataaacacttgtgagactgtttgggagagctta 1664453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 3936851 - 3936787
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||| |||  ||||||  | |||||||||| |||||||||||||||  |||||||||||    
T  3936851 atagcttataggaagacaatttagctttattttatcctttgttatagaaatagattatacataag 3936787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 7918713 - 7918781
Alignment:
Q  12 ttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttat 80  Q
    |||||| | |||||||||||||||||   || |||| |||||||||||||||||| | ||| |||||||    
T  7918713 ttatttaaacttatctactagcataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 7918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 8909052 - 8908992
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttataca 187  Q
    ||||||||||||||| |||||| ||  |||| ||||||||||||||  |||| ||||||||    
T  8909052 atagcttatatgaaaacaatttaactatattatatcttttgttataacaatagcttataca 8908992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 30191072 - 30191144
Alignment:
Q  11 cttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatgac 83  Q
    |||||||||  ||||||| | |||||||  || || | |||||||||||||||||| ||||| ||||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgac 30191144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 33522458 - 33522430
Alignment:
Q  157 tttatcttttgttatagaaataacttata 185  Q
    |||||||||||||||||||||||||||||    
T  33522458 tttatcttttgttatagaaataacttata 33522430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 34770894 - 34770830
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||| |||||| |||||| || |||||||||||||||| || ||||||  || ||||||||    
T  34770894 atagcttaaatgaaaacaatttgactttattttatcttttgtaatggaaatagtttttacataag 34770830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 38561702 - 38561670
Alignment:
Q  153 ttattttatcttttgttatagaaataacttata 185  Q
    |||||||||||||||||||| ||||||||||||    
T  38561702 ttattttatcttttgttatataaataacttata 38561670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 39392755 - 39392791
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacata 189  Q
    ||||||||||||||||||||||||||  |||||||||    
T  39392755 ttattttatcttttgttatagaaatagtttatacata 39392791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 51563 - 51508
Alignment:
Q  134 atatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    |||||||| |||||| || ||||||||| |||||||||| ||||||||||||||||    
T  51563 atatgaaaacaatttaactttattttatattttgttataaaaataacttatacata 51508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 1168 - 1206
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  1168 ttattttatcttttgttatagaaatagcttatacataag 1206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 9847 - 9929
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataagaaaatatatgaaaagcacttat 213  Q
    ||||||||||| |  ||| || | ||||||| ||||||||||||||||||||||||||||| |  ||||||| ||||| ||||    
T  9847 cttatatgaaaactttttgacttaattttattttttgttatagaaataacttatacataagcacctatatgataagcatttat 9929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 2807 - 2769
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  2807 ttattttatcttttgttatagaaatagcttatacataag 2769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 104228 - 104266
Alignment:
Q  153 ttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  104228 ttattttattttttgttatagaaataacttatacataag 104266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 20292 - 20235
Alignment:
Q  132 ttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacata 189  Q
    |||||||||| |||||| || ||||||||| |||| ||| ||||||||||||||||||    
T  20292 ttatatgaaaacaatttgacattattttatgttttattaaagaaataacttatacata 20235  T

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Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 42592 - 42555
Alignment:
Q  154 tattttatcttttgttatagaaataacttatacataag 191  Q
    |||||||||||||||||||||||| |||||||||||||    
T  42592 tattttatcttttgttatagaaatgacttatacataag 42555  T

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Target: scaffold0100; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42757 - 42677
Alignment:
Q  1 tttggatttacttatttgatcttatctactagcataagagctggtgaaactgtttgggagagcttagggaaataacttatga 82  Q
    ||||||||| | ||||||| ||||| ||||||||||||  || |||||| ||||||||| |||||  ||||| |||||||||    
T  42757 tttggattttcctatttgagcttatatactagcataagcacttgtgaaaatgtttggga-agcttgtggaaacaacttatga 42677  T

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Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 84201 - 84254
Alignment:
Q  131 cttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttat 184  Q
    ||||||||||| |||||| || ||||||||||||||| ||| ||||||||||||    
T  84201 cttatatgaaaacaattttacattattttatcttttgctattgaaataacttat 84254  T

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Target: scaffold0549 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 1792 - 1856
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||| |||||||||  || || || ||||||||||||||||||||||| || |||||| |||||    
T  1792 atagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataag 1856  T

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Target: scaffold0549; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 3882 - 3946
Alignment:
Q  127 atagcttatatgaaagcaatttcacgttattttatcttttgttatagaaataacttatacataag 191  Q
    ||||| |||||||||  || || || ||||||||||||||||||||||| || |||||| |||||    
T  3882 atagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataag 3946  T

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Target: scaffold0199 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 6950 - 6894
Alignment:
Q  10 acttatttgatcttatctactagcataagagctggtgaaactgtttgggagagctta 66  Q
    ||||||||||  ||||||||||||||||   || |||| ||||||||||||||||||    
T  6950 acttatttgagtttatctactagcataaacacttgtgagactgtttgggagagctta 6894  T

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