View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3929_high_5 (Length: 800)

Name: NF3929_high_5
Description: NF3929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3929_high_5
NF3929_high_5
[»] chr6 (45 HSPs)
chr6 (18-345)||(21970210-21970543)
chr6 (411-613)||(21970610-21970813)
chr6 (175-345)||(18667860-18668032)
chr6 (122-345)||(31644580-31644807)
chr6 (411-501)||(18667700-18667790)
chr6 (204-340)||(12782737-12782877)
chr6 (411-519)||(29023613-29023722)
chr6 (134-333)||(29023799-29024002)
chr6 (122-257)||(4509431-4509566)
chr6 (176-257)||(33574053-33574134)
chr6 (134-332)||(4979273-4979481)
chr6 (411-501)||(6093954-6094044)
chr6 (411-513)||(31644410-31644513)
chr6 (176-257)||(243157-243238)
chr6 (411-492)||(4979121-4979202)
chr6 (176-257)||(11763444-11763525)
chr6 (135-340)||(6093674-6093882)
chr6 (176-257)||(33574440-33574522)
chr6 (714-787)||(21970916-21970993)
chr6 (416-522)||(14779211-14779318)
chr6 (176-257)||(26958462-26958544)
chr6 (280-340)||(11763350-11763410)
chr6 (425-493)||(20469057-20469125)
chr6 (425-492)||(10091804-10091871)
chr6 (414-501)||(27109019-27109106)
chr6 (414-501)||(27150816-27150903)
chr6 (423-515)||(8549561-8549655)
chr6 (122-241)||(9661753-9661874)
chr6 (24-82)||(20193372-20193430)
chr6 (24-82)||(22087395-22087453)
chr6 (425-516)||(1339171-1339264)
chr6 (214-255)||(6974971-6975012)
chr6 (425-515)||(35224827-35224919)
chr6 (280-339)||(4509600-4509659)
chr6 (416-513)||(4576692-4576791)
chr6 (425-484)||(6974749-6974807)
chr6 (122-257)||(8549825-8549960)
chr6 (425-513)||(18871240-18871330)
chr6 (187-257)||(22755307-22755377)
chr6 (425-513)||(34969749-34969839)
chr6 (726-755)||(357296-357325)
chr6 (295-340)||(2564910-2564955)
chr6 (468-516)||(8858029-8858078)
chr6 (423-514)||(33574667-33574760)
chr6 (423-514)||(33574845-33574938)
[»] chr3 (117 HSPs)
chr3 (122-345)||(23795789-23796013)
chr3 (134-345)||(8433450-8433663)
chr3 (176-345)||(54262714-54262885)
chr3 (122-340)||(45635858-45636087)
chr3 (411-499)||(23796080-23796168)
chr3 (122-340)||(50029928-50030157)
chr3 (134-345)||(29806030-29806245)
chr3 (134-345)||(19914054-19914270)
chr3 (122-257)||(26885242-26885377)
chr3 (122-257)||(42622120-42622255)
chr3 (411-513)||(52024438-52024541)
chr3 (411-497)||(19914337-19914423)
chr3 (411-519)||(8966234-8966343)
chr3 (411-515)||(9252156-9252261)
chr3 (272-345)||(5528857-5528930)
chr3 (176-257)||(15996875-15996956)
chr3 (415-515)||(29806316-29806417)
chr3 (280-345)||(45602203-45602268)
chr3 (134-257)||(25482513-25482637)
chr3 (195-345)||(52024608-52024762)
chr3 (123-257)||(40477759-40477893)
chr3 (414-492)||(54262566-54262644)
chr3 (411-492)||(8433729-8433810)
chr3 (176-257)||(25834286-25834367)
chr3 (176-257)||(45538915-45538996)
chr3 (411-500)||(52162686-52162775)
chr3 (280-340)||(8966086-8966146)
chr3 (413-515)||(26409628-26409732)
chr3 (122-257)||(9251859-9251994)
chr3 (416-510)||(50029754-50029849)
chr3 (411-516)||(35748919-35749025)
chr3 (176-257)||(23456509-23456590)
chr3 (142-257)||(35749184-35749299)
chr3 (134-257)||(37359776-37359897)
chr3 (415-518)||(45602019-45602123)
chr3 (122-257)||(9506904-9507039)
chr3 (122-257)||(9514879-9515014)
chr3 (283-342)||(35749094-35749153)
chr3 (142-257)||(52162417-52162531)
chr3 (412-517)||(5528998-5529104)
chr3 (176-257)||(26457225-26457307)
chr3 (176-257)||(40473889-40473971)
chr3 (176-257)||(41282804-41282886)
chr3 (176-257)||(7352438-7352519)
chr3 (283-340)||(9252026-9252083)
chr3 (204-257)||(37128074-37128127)
chr3 (176-257)||(40727619-40727700)
chr3 (176-241)||(51344429-51344494)
chr3 (176-256)||(1129401-1129480)
chr3 (205-257)||(24170015-24170067)
chr3 (176-258)||(8965970-8966053)
chr3 (176-255)||(33006354-33006433)
chr3 (425-518)||(49950919-49951014)
chr3 (176-257)||(1021030-1021112)
chr3 (184-258)||(42658107-42658181)
chr3 (176-257)||(43745617-43745699)
chr3 (719-757)||(45628444-45628482)
chr3 (413-513)||(45635681-45635782)
chr3 (416-501)||(4817089-4817174)
chr3 (280-345)||(25834401-25834466)
chr3 (186-258)||(45602302-45602375)
chr3 (176-257)||(48825673-48825753)
chr3 (176-256)||(14654054-14654134)
chr3 (413-516)||(26456951-26457055)
chr3 (425-515)||(32720303-32720395)
chr3 (416-514)||(37520701-37520801)
chr3 (416-496)||(52776468-52776547)
chr3 (425-514)||(14460501-14460592)
chr3 (204-255)||(39678183-39678234)
chr3 (174-257)||(40784795-40784878)
chr3 (426-484)||(42622929-42622985)
chr3 (176-257)||(10279267-10279351)
chr3 (176-257)||(26849979-26850061)
chr3 (425-517)||(36019412-36019506)
chr3 (425-513)||(37567535-37567625)
chr3 (414-514)||(42478990-42479092)
chr3 (414-483)||(48388790-48388860)
chr3 (425-513)||(51235838-51235928)
chr3 (425-517)||(52782155-52782249)
chr3 (176-257)||(54788411-54788493)
chr3 (425-512)||(35352191-35352280)
chr3 (204-257)||(39253117-39253170)
chr3 (414-491)||(52082066-52082143)
chr3 (414-482)||(55365406-55365475)
chr3 (413-515)||(882029-882133)
chr3 (122-257)||(7862152-7862287)
chr3 (280-340)||(14653960-14654020)
chr3 (176-257)||(29388966-29389049)
chr3 (176-257)||(35137490-35137573)
chr3 (280-340)||(36099334-36099394)
chr3 (280-344)||(36790059-36790123)
chr3 (280-340)||(43745523-43745583)
chr3 (122-257)||(44653176-44653312)
chr3 (423-513)||(44653485-44653577)
chr3 (280-340)||(45538821-45538881)
chr3 (176-257)||(54428550-54428633)
chr3 (425-483)||(2667801-2667860)
chr3 (218-257)||(30349100-30349139)
chr3 (218-257)||(34825379-34825418)
chr3 (280-339)||(40477928-40477987)
chr3 (425-514)||(45927537-45927628)
chr3 (280-339)||(47745998-47746057)
chr3 (425-513)||(33830847-33830937)
chr3 (176-257)||(39987611-39987693)
chr3 (416-516)||(44522298-44522400)
chr3 (425-513)||(44962921-44963011)
chr3 (176-257)||(50412342-50412424)
chr3 (176-255)||(53289503-53289584)
chr3 (122-255)||(876495-876627)
chr3 (214-255)||(15670074-15670115)
chr3 (416-484)||(35389321-35389390)
chr3 (283-340)||(37127980-37128037)
chr3 (423-518)||(40478072-40478169)
chr3 (283-340)||(41982158-41982215)
chr3 (176-257)||(44522078-44522158)
chr3 (416-477)||(52038388-52038449)
chr3 (425-482)||(53376908-53376965)
[»] chr4 (114 HSPs)
chr4 (133-345)||(42881210-42881423)
chr4 (122-344)||(43959165-43959389)
chr4 (411-501)||(43959007-43959097)
chr4 (122-257)||(50187505-50187641)
chr4 (411-513)||(42881040-42881143)
chr4 (411-513)||(46663629-46663732)
chr4 (411-519)||(50189316-50189425)
chr4 (134-257)||(27736852-27736976)
chr4 (411-514)||(30060529-30060633)
chr4 (122-257)||(352743-352878)
chr4 (411-501)||(408366-408456)
chr4 (411-501)||(33491614-33491704)
chr4 (134-334)||(33491782-33491989)
chr4 (124-257)||(423153-423286)
chr4 (412-516)||(1433804-1433909)
chr4 (176-257)||(33491432-33491513)
chr4 (280-340)||(11038224-11038284)
chr4 (176-257)||(31998783-31998864)
chr4 (411-476)||(37748730-37748795)
chr4 (417-513)||(46549062-46549159)
chr4 (413-484)||(32570673-32570743)
chr4 (204-345)||(37748515-37748663)
chr4 (122-257)||(43363328-43363463)
chr4 (425-491)||(31908759-31908825)
chr4 (283-345)||(51944602-51944664)
chr4 (176-257)||(52607840-52607922)
chr4 (122-239)||(56302834-56302952)
chr4 (176-257)||(5970970-5971051)
chr4 (184-257)||(34828785-34828858)
chr4 (283-340)||(50187671-50187728)
chr4 (142-257)||(408087-408203)
chr4 (280-340)||(1433984-1434044)
chr4 (176-256)||(54506144-54506224)
chr4 (283-334)||(408237-408288)
chr4 (411-466)||(27736636-27736691)
chr4 (425-492)||(36091375-36091442)
chr4 (280-339)||(46548923-46548982)
chr4 (135-257)||(46663346-46663468)
chr4 (176-257)||(26117801-26117883)
chr4 (283-340)||(27736764-27736821)
chr4 (176-257)||(50383600-50383681)
chr4 (414-483)||(51282241-51282310)
chr4 (411-500)||(51944731-51944820)
chr4 (176-241)||(54996152-54996217)
chr4 (425-515)||(46630643-46630735)
chr4 (425-514)||(2526488-2526579)
chr4 (425-514)||(10778990-10779081)
chr4 (413-484)||(25607721-25607791)
chr4 (425-514)||(38955041-38955132)
chr4 (216-255)||(46548848-46548887)
chr4 (134-257)||(51944448-51944570)
chr4 (176-257)||(582823-582905)
chr4 (176-257)||(1856856-1856938)
chr4 (182-236)||(5337917-5337971)
chr4 (176-257)||(9356655-9356734)
chr4 (425-491)||(9858566-9858632)
chr4 (411-497)||(11038063-11038149)
chr4 (425-513)||(16004533-16004623)
chr4 (425-517)||(23639232-23639326)
chr4 (176-257)||(24980211-24980293)
chr4 (187-241)||(32845940-32845994)
chr4 (298-340)||(34595146-34595188)
chr4 (159-248)||(34595351-34595441)
chr4 (425-513)||(42244537-42244627)
chr4 (425-513)||(44998727-44998817)
chr4 (283-345)||(46663500-46663562)
chr4 (276-342)||(50498503-50498569)
chr4 (413-513)||(50776076-50776178)
chr4 (122-241)||(53936797-53936918)
chr4 (280-345)||(352644-352709)
chr4 (425-512)||(21515306-21515395)
chr4 (215-248)||(28967642-28967675)
chr4 (204-257)||(30348435-30348488)
chr4 (413-462)||(34595022-34595071)
chr4 (414-455)||(42080387-42080428)
chr4 (176-257)||(42177611-42177692)
chr4 (176-257)||(50498596-50498677)
chr4 (280-340)||(5970876-5970936)
chr4 (425-511)||(24292295-24292383)
chr4 (280-340)||(31998898-31998958)
chr4 (280-340)||(32845830-32845890)
chr4 (280-340)||(33491338-33491398)
chr4 (176-256)||(36631306-36631386)
chr4 (425-515)||(48549662-48549754)
chr4 (176-256)||(50775829-50775909)
chr4 (218-257)||(126672-126711)
chr4 (280-339)||(24980119-24980178)
chr4 (280-323)||(28967718-28967761)
chr4 (280-339)||(29582135-29582194)
chr4 (422-484)||(30348193-30348256)
chr4 (413-483)||(33612828-33612899)
chr4 (416-513)||(42177342-42177441)
chr4 (425-483)||(42680629-42680688)
chr4 (416-455)||(43363636-43363675)
chr4 (122-256)||(50607685-50607820)
chr4 (425-518)||(54499891-54499986)
chr4 (218-248)||(1434088-1434118)
chr4 (416-482)||(21424450-21424515)
chr4 (205-255)||(32737462-32737512)
chr4 (425-513)||(36569965-36570055)
chr4 (182-257)||(45692893-45692970)
chr4 (425-513)||(52257449-52257539)
chr4 (416-501)||(352487-352572)
chr4 (204-257)||(3763198-3763251)
chr4 (425-501)||(27636057-27636134)
chr4 (280-345)||(27761571-27761636)
chr4 (214-255)||(27950527-27950568)
chr4 (154-255)||(29646656-29646757)
chr4 (423-492)||(34936577-34936646)
chr4 (414-513)||(36631036-36631136)
chr4 (280-345)||(36631206-36631271)
chr4 (204-257)||(38008237-38008290)
chr4 (154-255)||(48066278-48066379)
chr4 (413-501)||(48647032-48647121)
[»] chr5 (85 HSPs)
chr5 (122-345)||(13645690-13645914)
chr5 (122-340)||(32455303-32455525)
chr5 (134-345)||(10568650-10568864)
chr5 (208-345)||(40585033-40585171)
chr5 (411-500)||(13645534-13645623)
chr5 (218-339)||(43059661-43059783)
chr5 (136-345)||(36155865-36156077)
chr5 (179-345)||(17069051-17069221)
chr5 (176-345)||(39041476-39041647)
chr5 (411-501)||(40584876-40584966)
chr5 (411-484)||(2270814-2270887)
chr5 (134-248)||(38354996-38355110)
chr5 (122-257)||(13118802-13118937)
chr5 (117-334)||(24431981-24432202)
chr5 (411-515)||(32455599-32455702)
chr5 (411-501)||(36156144-36156234)
chr5 (176-257)||(42486876-42486957)
chr5 (411-498)||(17069288-17069375)
chr5 (204-345)||(2270954-2271099)
chr5 (280-340)||(38354890-38354950)
chr5 (411-482)||(1445758-1445829)
chr5 (413-510)||(37962997-37963096)
chr5 (134-257)||(1445988-1446112)
chr5 (195-257)||(10400962-10401024)
chr5 (425-514)||(13091230-13091320)
chr5 (411-484)||(10400731-10400804)
chr5 (285-342)||(10400873-10400930)
chr5 (412-501)||(24431813-24431902)
chr5 (425-515)||(25684380-25684472)
chr5 (283-334)||(23258708-23258759)
chr5 (176-257)||(30753720-30753803)
chr5 (122-255)||(4617985-4618117)
chr5 (180-257)||(5359785-5359862)
chr5 (176-249)||(34259594-34259667)
chr5 (411-460)||(39041360-39041409)
chr5 (413-501)||(40563128-40563217)
chr5 (425-494)||(41802424-41802493)
chr5 (122-257)||(13126981-13127116)
chr5 (425-483)||(22798098-22798157)
chr5 (413-484)||(31588540-31588610)
chr5 (413-514)||(32624481-32624584)
chr5 (176-257)||(2851745-2851827)
chr5 (425-491)||(9589525-9589591)
chr5 (415-465)||(10568530-10568580)
chr5 (425-491)||(14967548-14967614)
chr5 (215-257)||(25929634-25929676)
chr5 (122-256)||(29959880-29960014)
chr5 (416-501)||(29960174-29960260)
chr5 (122-255)||(35162352-35162485)
chr5 (411-461)||(43059538-43059588)
chr5 (280-345)||(12334476-12334541)
chr5 (176-257)||(33210425-33210506)
chr5 (416-501)||(39816518-39816603)
chr5 (280-332)||(1445900-1445952)
chr5 (280-340)||(5359895-5359955)
chr5 (425-511)||(16730040-16730128)
chr5 (280-344)||(29665992-29666056)
chr5 (425-501)||(29744219-29744295)
chr5 (176-257)||(33678210-33678293)
chr5 (280-340)||(34259709-34259769)
chr5 (280-340)||(42486782-42486842)
chr5 (280-339)||(3425961-3426020)
chr5 (425-483)||(8068350-8068409)
chr5 (176-255)||(9589263-9589342)
chr5 (188-255)||(14096677-14096744)
chr5 (425-483)||(15726242-15726301)
chr5 (413-483)||(22279248-22279319)
chr5 (286-345)||(30753619-30753678)
chr5 (425-483)||(31236619-31236678)
chr5 (425-483)||(32063556-32063615)
chr5 (176-255)||(41802160-41802239)
chr5 (176-257)||(42597745-42597828)
chr5 (425-483)||(43411548-43411607)
chr5 (204-257)||(702024-702078)
chr5 (176-257)||(3425846-3425928)
chr5 (446-496)||(4039488-4039538)
chr5 (280-334)||(19518208-19518262)
chr5 (416-501)||(30753460-30753546)
chr5 (204-257)||(9629990-9630043)
chr5 (416-484)||(13127288-13127357)
chr5 (416-461)||(23258582-23258627)
chr5 (280-333)||(25929710-25929763)
chr5 (413-482)||(27980079-27980148)
chr5 (425-512)||(28769947-28770036)
chr5 (425-516)||(29996813-29996905)
[»] chr7 (84 HSPs)
chr7 (125-345)||(2290794-2291016)
chr7 (134-332)||(41742594-41742798)
chr7 (218-340)||(23561212-23561335)
chr7 (142-340)||(29682065-29682269)
chr7 (412-514)||(43631054-43631157)
chr7 (122-340)||(43631231-43631455)
chr7 (411-499)||(15584556-15584644)
chr7 (176-257)||(1806536-1806617)
chr7 (176-257)||(3214573-3214654)
chr7 (176-257)||(11750692-11750773)
chr7 (412-501)||(16086959-16087048)
chr7 (413-482)||(41742881-41742950)
chr7 (122-340)||(30878316-30878544)
chr7 (411-501)||(2291083-2291173)
chr7 (283-345)||(16087116-16087178)
chr7 (280-340)||(15591555-15591615)
chr7 (122-257)||(17306870-17307005)
chr7 (414-513)||(44963823-44963923)
chr7 (414-481)||(23561411-23561478)
chr7 (425-515)||(30936092-30936183)
chr7 (411-501)||(29682342-29682432)
chr7 (176-257)||(41047112-41047194)
chr7 (280-345)||(15584711-15584776)
chr7 (412-501)||(15591689-15591778)
chr7 (176-241)||(26413894-26413959)
chr7 (176-257)||(46575374-46575455)
chr7 (176-257)||(47369490-47369571)
chr7 (174-257)||(3602324-3602408)
chr7 (122-241)||(15591385-15591503)
chr7 (280-339)||(47258857-47258916)
chr7 (176-241)||(23110716-23110782)
chr7 (176-257)||(38665943-38666025)
chr7 (413-501)||(7574127-7574216)
chr7 (284-345)||(17020204-17020265)
chr7 (425-512)||(25867222-25867311)
chr7 (425-516)||(45196801-45196894)
chr7 (425-515)||(9923387-9923479)
chr7 (425-493)||(11486312-11486380)
chr7 (134-257)||(16087210-16087334)
chr7 (420-501)||(22967422-22967505)
chr7 (425-515)||(32186421-32186513)
chr7 (425-515)||(42039619-42039711)
chr7 (413-496)||(8577943-8578025)
chr7 (117-236)||(23608283-23608402)
chr7 (186-241)||(37504835-37504890)
chr7 (425-483)||(42902417-42902476)
chr7 (176-257)||(15584810-15584891)
chr7 (176-257)||(15715959-15716041)
chr7 (176-257)||(24953198-24953280)
chr7 (416-494)||(37118354-37118432)
chr7 (414-460)||(41809505-41809551)
chr7 (425-491)||(45857498-45857564)
chr7 (280-345)||(1806651-1806716)
chr7 (175-257)||(7583279-7583363)
chr7 (176-257)||(35291597-35291678)
chr7 (176-257)||(35357756-35357837)
chr7 (122-257)||(39558606-39558743)
chr7 (416-512)||(47258681-47258778)
chr7 (185-257)||(15954195-15954267)
chr7 (425-515)||(24505440-24505532)
chr7 (280-344)||(25411798-25411862)
chr7 (281-345)||(26413776-26413840)
chr7 (176-257)||(28265022-28265105)
chr7 (425-515)||(39444282-39444374)
chr7 (280-340)||(41047018-41047078)
chr7 (182-257)||(45232318-45232395)
chr7 (425-514)||(3062210-3062301)
chr7 (411-454)||(17020332-17020375)
chr7 (413-483)||(17335042-17335113)
chr7 (176-257)||(24812134-24812217)
chr7 (425-483)||(40947004-40947063)
chr7 (425-483)||(41715170-41715229)
chr7 (425-483)||(47220272-47220331)
chr7 (425-513)||(1282502-1282592)
chr7 (423-484)||(6791474-6791536)
chr7 (425-491)||(8770393-8770459)
chr7 (416-501)||(35291339-35291425)
chr7 (283-340)||(3214691-3214748)
chr7 (435-515)||(15954588-15954669)
chr7 (214-255)||(35859357-35859398)
chr7 (413-501)||(37504572-37504661)
chr7 (414-514)||(42975201-42975302)
chr7 (714-755)||(45837936-45837977)
chr7 (280-345)||(46291270-46291335)
[»] chr2 (68 HSPs)
chr2 (215-345)||(10456217-10456348)
chr2 (142-340)||(17821552-17821752)
chr2 (124-340)||(4114838-4115055)
chr2 (411-497)||(10456064-10456150)
chr2 (411-501)||(16114477-16114567)
chr2 (122-257)||(39620192-39620329)
chr2 (176-257)||(40947034-40947115)
chr2 (205-340)||(16114640-16114779)
chr2 (157-255)||(38618000-38618099)
chr2 (411-512)||(17821825-17821927)
chr2 (176-257)||(35896683-35896764)
chr2 (413-501)||(14947469-14947557)
chr2 (280-344)||(38617898-38617962)
chr2 (413-484)||(38073137-38073207)
chr2 (280-345)||(33494102-33494167)
chr2 (412-501)||(38617741-38617829)
chr2 (176-257)||(40495520-40495603)
chr2 (425-514)||(5084838-5084929)
chr2 (413-480)||(42640885-42640951)
chr2 (413-513)||(3723941-3724043)
chr2 (411-501)||(4114676-4114765)
chr2 (176-257)||(6945395-6945477)
chr2 (176-257)||(21404469-21404550)
chr2 (425-516)||(40533568-40533661)
chr2 (425-515)||(16814849-16814941)
chr2 (425-515)||(16854129-16854221)
chr2 (425-519)||(37725868-37725964)
chr2 (215-258)||(833600-833643)
chr2 (123-257)||(4298171-4298306)
chr2 (218-257)||(16637297-16637336)
chr2 (425-518)||(28394385-28394480)
chr2 (411-482)||(33494237-33494308)
chr2 (413-483)||(36947513-36947584)
chr2 (122-257)||(45157531-45157666)
chr2 (425-483)||(45555699-45555758)
chr2 (425-513)||(2316838-2316928)
chr2 (215-249)||(14947270-14947304)
chr2 (412-461)||(6588289-6588338)
chr2 (204-257)||(38064741-38064794)
chr2 (176-257)||(44144355-44144436)
chr2 (413-501)||(45157818-45157907)
chr2 (280-340)||(1580423-1580483)
chr2 (280-344)||(4108477-4108541)
chr2 (425-515)||(6657762-6657854)
chr2 (176-228)||(9122456-9122508)
chr2 (414-466)||(16637077-16637129)
chr2 (425-511)||(21836602-21836690)
chr2 (280-340)||(35896589-35896649)
chr2 (280-340)||(39620363-39620423)
chr2 (425-519)||(41839971-41840067)
chr2 (425-492)||(6438194-6438261)
chr2 (425-483)||(18576331-18576390)
chr2 (414-484)||(27401035-27401106)
chr2 (218-257)||(32602575-32602614)
chr2 (425-514)||(35292828-35292919)
chr2 (176-257)||(9589168-9589250)
chr2 (283-345)||(16637197-16637259)
chr2 (176-257)||(18998989-18999071)
chr2 (412-513)||(19268566-19268668)
chr2 (176-257)||(33493532-33493613)
chr2 (283-340)||(9589287-9589344)
chr2 (425-516)||(13568209-13568302)
chr2 (122-255)||(14533095-14533227)
chr2 (204-257)||(27400813-27400866)
chr2 (176-237)||(30980935-30980996)
chr2 (142-249)||(33493951-33494060)
chr2 (413-501)||(35895324-35895413)
chr2 (214-255)||(36489450-36489491)
[»] scaffold0008 (2 HSPs)
scaffold0008 (411-500)||(45376-45465)
scaffold0008 (124-321)||(45110-45308)
[»] chr1 (127 HSPs)
chr1 (134-257)||(25082020-25082143)
chr1 (411-501)||(25081771-25081861)
chr1 (176-340)||(45809498-45809673)
chr1 (123-340)||(17525438-17525667)
chr1 (272-345)||(48796192-48796265)
chr1 (122-248)||(44382297-44382422)
chr1 (411-515)||(42958839-42958944)
chr1 (412-501)||(44382030-44382119)
chr1 (411-510)||(17525740-17525840)
chr1 (272-344)||(24245653-24245725)
chr1 (412-515)||(34100711-34100815)
chr1 (414-501)||(24511885-24511972)
chr1 (122-257)||(38260803-38260938)
chr1 (122-257)||(51056198-51056332)
chr1 (122-257)||(52180235-52180370)
chr1 (415-501)||(12178906-12178992)
chr1 (411-501)||(45809748-45809838)
chr1 (283-340)||(30547782-30547839)
chr1 (412-501)||(30547914-30548003)
chr1 (176-257)||(35874209-35874290)
chr1 (411-500)||(46707358-46707447)
chr1 (122-257)||(24230842-24230976)
chr1 (411-513)||(32144669-32144772)
chr1 (124-345)||(34100883-34101109)
chr1 (122-334)||(51610719-51610929)
chr1 (134-345)||(12178619-12178834)
chr1 (179-340)||(42959000-42959165)
chr1 (176-257)||(31821853-31821934)
chr1 (412-501)||(48796333-48796422)
chr1 (280-340)||(32144843-32144903)
chr1 (280-340)||(46707522-46707582)
chr1 (179-257)||(30547670-30547749)
chr1 (122-248)||(32144947-32145074)
chr1 (411-513)||(51610536-51610639)
chr1 (176-257)||(44263701-44263783)
chr1 (280-345)||(24511759-24511824)
chr1 (413-512)||(41550148-41550249)
chr1 (414-514)||(51184345-51184446)
chr1 (425-497)||(2665512-2665584)
chr1 (413-519)||(33771640-33771748)
chr1 (416-523)||(50239267-50239375)
chr1 (189-257)||(52441346-52441414)
chr1 (134-257)||(24511601-24511724)
chr1 (425-513)||(2684285-2684375)
chr1 (413-482)||(17644423-17644490)
chr1 (176-257)||(24003690-24003772)
chr1 (176-257)||(24381371-24381453)
chr1 (176-257)||(45622754-45622836)
chr1 (414-483)||(7122261-7122330)
chr1 (176-257)||(34038435-34038516)
chr1 (295-340)||(44382193-44382238)
chr1 (416-515)||(52345597-52345698)
chr1 (425-515)||(10061474-10061566)
chr1 (425-515)||(14131350-14131442)
chr1 (425-515)||(14191211-14191303)
chr1 (420-501)||(21883122-21883205)
chr1 (122-237)||(26308495-26308608)
chr1 (425-515)||(29171482-29171574)
chr1 (176-257)||(30263851-30263934)
chr1 (182-257)||(30321161-30321237)
chr1 (425-515)||(39853276-39853368)
chr1 (425-515)||(40850338-40850430)
chr1 (176-255)||(42275608-42275688)
chr1 (413-484)||(46362053-46362125)
chr1 (413-515)||(49289227-49289331)
chr1 (176-257)||(12907334-12907417)
chr1 (413-483)||(27038848-27038919)
chr1 (425-484)||(41541508-41541567)
chr1 (411-454)||(52365643-52365686)
chr1 (425-482)||(9259848-9259906)
chr1 (413-513)||(20280526-20280628)
chr1 (413-513)||(25702435-25702537)
chr1 (425-482)||(27802129-27802187)
chr1 (176-257)||(31075880-31075962)
chr1 (425-517)||(48868058-48868152)
chr1 (176-257)||(48977146-48977228)
chr1 (413-513)||(49739435-49739537)
chr1 (176-241)||(51787754-51787820)
chr1 (208-257)||(13203186-13203235)
chr1 (425-502)||(23304724-23304801)
chr1 (284-341)||(26307719-26307776)
chr1 (176-249)||(30896868-30896940)
chr1 (425-512)||(31570972-31571061)
chr1 (176-241)||(32017058-32017123)
chr1 (280-340)||(3399323-3399383)
chr1 (413-501)||(24245495-24245583)
chr1 (413-515)||(33234052-33234156)
chr1 (425-515)||(33828862-33828954)
chr1 (425-515)||(33839012-33839104)
chr1 (414-501)||(34038174-34038262)
chr1 (280-340)||(34038341-34038401)
chr1 (414-501)||(42275348-42275436)
chr1 (280-340)||(42275512-42275572)
chr1 (426-482)||(46918701-46918756)
chr1 (297-345)||(52365743-52365791)
chr1 (280-340)||(52441255-52441315)
chr1 (122-257)||(477705-477840)
chr1 (425-514)||(3150184-3150275)
chr1 (216-255)||(5800010-5800049)
chr1 (218-257)||(6329521-6329560)
chr1 (218-257)||(8396446-8396485)
chr1 (176-257)||(10348295-10348378)
chr1 (413-514)||(12105159-12105262)
chr1 (425-483)||(17376672-17376731)
chr1 (413-460)||(22821553-22821600)
chr1 (413-484)||(32912242-32912312)
chr1 (425-514)||(41321322-41321413)
chr1 (425-518)||(43224640-43224735)
chr1 (425-483)||(44647276-44647335)
chr1 (280-339)||(48977053-48977112)
chr1 (215-257)||(2249857-2249899)
chr1 (425-513)||(7426660-7426750)
chr1 (413-513)||(13202936-13203038)
chr1 (176-237)||(21072829-21072891)
chr1 (283-345)||(25081928-25081990)
chr1 (412-454)||(29852249-29852291)
chr1 (423-519)||(44263971-44264069)
chr1 (218-248)||(46707626-46707656)
chr1 (176-257)||(52345871-52345953)
chr1 (295-340)||(9587827-9587872)
chr1 (425-477)||(10635282-10635335)
chr1 (176-257)||(12105430-12105511)
chr1 (204-257)||(28624560-28624613)
chr1 (280-333)||(31530493-31530546)
chr1 (283-340)||(35874115-35874172)
chr1 (134-223)||(52365874-52365963)
chr1 (176-257)||(52861568-52861649)
[»] scaffold0174 (2 HSPs)
scaffold0174 (122-258)||(32567-32699)
scaffold0174 (415-501)||(32834-32920)
[»] chr8 (70 HSPs)
chr8 (123-340)||(27171916-27172144)
chr8 (412-519)||(36274558-36274666)
chr8 (411-515)||(17792507-17792612)
chr8 (134-345)||(31158574-31158790)
chr8 (411-511)||(27172217-27172318)
chr8 (142-248)||(17792224-17792330)
chr8 (124-340)||(24937762-24937994)
chr8 (122-257)||(29454479-29454615)
chr8 (122-257)||(6631176-6631311)
chr8 (142-340)||(35587967-35588169)
chr8 (423-513)||(36672010-36672101)
chr8 (411-501)||(6631416-6631506)
chr8 (179-257)||(36672277-36672355)
chr8 (183-257)||(45452657-45452731)
chr8 (412-501)||(32238240-32238328)
chr8 (176-257)||(40776889-40776970)
chr8 (122-257)||(4214765-4214901)
chr8 (134-257)||(24377322-24377446)
chr8 (415-514)||(31158861-31158961)
chr8 (123-241)||(1043060-1043179)
chr8 (416-513)||(29265589-29265688)
chr8 (411-501)||(24937598-24937688)
chr8 (176-257)||(41720302-41720384)
chr8 (411-500)||(24377605-24377694)
chr8 (280-340)||(17792374-17792434)
chr8 (425-514)||(38803751-38803842)
chr8 (176-257)||(15451718-15451800)
chr8 (425-491)||(17642390-17642456)
chr8 (283-345)||(24377485-24377547)
chr8 (425-513)||(36835659-36835749)
chr8 (195-241)||(44542095-44542141)
chr8 (413-516)||(3053104-3053209)
chr8 (412-501)||(32718968-32719057)
chr8 (413-512)||(38627292-38627393)
chr8 (176-257)||(40578748-40578829)
chr8 (416-483)||(36162500-36162568)
chr8 (147-255)||(37465709-37465817)
chr8 (425-491)||(2273326-2273392)
chr8 (176-257)||(5328653-5328735)
chr8 (179-257)||(6630755-6630833)
chr8 (123-257)||(26988659-26988792)
chr8 (413-513)||(29454143-29454245)
chr8 (416-501)||(43841856-43841942)
chr8 (123-255)||(2731791-2731924)
chr8 (208-257)||(9497625-9497674)
chr8 (208-257)||(10706826-10706875)
chr8 (176-257)||(26522237-26522318)
chr8 (413-501)||(29039626-29039715)
chr8 (425-512)||(35037780-35037869)
chr8 (208-257)||(36162279-36162328)
chr8 (283-340)||(36672186-36672243)
chr8 (425-512)||(38971781-38971870)
chr8 (425-512)||(39002879-39002968)
chr8 (218-255)||(42047195-42047232)
chr8 (280-340)||(2261203-2261263)
chr8 (416-484)||(9008068-9008135)
chr8 (423-482)||(34634168-34634228)
chr8 (176-257)||(36667288-36667371)
chr8 (280-340)||(40776795-40776855)
chr8 (425-483)||(464567-464626)
chr8 (283-322)||(6630869-6630908)
chr8 (218-257)||(40267578-40267617)
chr8 (716-754)||(11323098-11323136)
chr8 (176-257)||(34633918-34634000)
chr8 (176-257)||(37676207-37676289)
chr8 (413-513)||(43182724-43182826)
chr8 (204-257)||(2749578-2749631)
chr8 (416-515)||(10706553-10706654)
chr8 (425-519)||(21835747-21835844)
chr8 (425-482)||(36886194-36886251)
[»] scaffold0775 (2 HSPs)
scaffold0775 (122-257)||(110-244)
scaffold0775 (283-345)||(17-79)
[»] scaffold0432 (1 HSPs)
scaffold0432 (176-257)||(3300-3381)
[»] scaffold0308 (1 HSPs)
scaffold0308 (176-257)||(7265-7348)
[»] scaffold0493 (1 HSPs)
scaffold0493 (425-513)||(1704-1794)
[»] scaffold0239 (1 HSPs)
scaffold0239 (425-517)||(15698-15792)
[»] scaffold0005 (1 HSPs)
scaffold0005 (413-461)||(271023-271071)
[»] scaffold0022 (1 HSPs)
scaffold0022 (425-483)||(166450-166509)


Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-116; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 18 - 345
Target Start/End: Original strand, 21970210 - 21970543
Alignment:
Q  18 atccatttataaaattgtttaccctttaaaaagaaagtcaagccaacattcaatttatgtacttgtatgcagttgctttcaaagaaaaagaatatacttt 117  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21970210 atccatttatagaattgtttaccctttaaaaagaaagtcaagacaacattcaatttatgtacttgtatgcagttgctttcaaagaaaaagaatatacttt 21970309  T
Q  118 aaaagcaa-----attttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaac 212  Q
     | | |||     ||||||||||||| |||| |||||| | ||||||| || | ||||| |||||||||||||||||||||||| ||||| |||||||||    
T  21970310 cataacaaggaaaattttatcgtacatctaatatatttgagtgtatcgatacatcaaacttaaaaatttatagttaaataagttgtgttttgaagaaaac 21970409  T
Q  213 tattattttttatcatttataattataatgattaaattttattcac-nnnnnnnttaaccaaataaaattgaatttttatcgttcataatagagaacttt 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||| |||| |||||||||||||||||    
T  21970410 tattattttttatcatttataattataatgattaaattttattcacaaaaaacattaacgaaataaaattgaattttcatcgctcataatagagaacttt 21970509  T
Q  312 gattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||||||||||||||||||||||||||    
T  21970510 gattattttatatgataatatgttaaaaatttac 21970543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 411 - 613
Target Start/End: Original strand, 21970610 - 21970813
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| | |||||||    
T  21970610 ccgacaaataactatttatttcataaaattgatcgttaatttatagatttaggaagtaagagtaccggtacaccagaatttatgagtgtaccgtagaagt 21970709  T
Q  510 tcccttaaaacaattggttaagcttcattannnnnnnnncatttacaagtaaagcttcgtatccaaagggaaatgctaacttgtat-tttaagacacaag 608  Q
    |||||||||||||||||| |||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21970710 tcccttaaaacaattggtcaagcttcatta-tttttttccatttacaagtaaagcttcgtatccaaagggaaatgctaacttgtatctttaagatacaag 21970808  T
Q  609 ttacc 613  Q
    |||||    
T  21970809 ttacc 21970813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 175 - 345
Target Start/End: Complemental strand, 18668032 - 18667860
Alignment:
Q  175 aaaatttatagttaaataagttt-tgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattcacnnnnnnntt-aacca 272  Q
    ||||||||||||||||| ||||| | |||  ||||||| |||||||||||||||| |||||||||||| ||||||| ||||||||        | ||| |    
T  18668032 aaaatttatagttaaatgagtttctttttttaagaaaaatattattttttatcatgtataattataattattaaatgttattcaccaaaagcgtcaacga 18667933  T
Q  273 aataaaattgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  18667932 aataaaattgaatttttatccttcataatagataactttgattattttatacgataatatgttaaaaatttac 18667860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 122 - 345
Target Start/End: Complemental strand, 31644807 - 31644580
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||||||||||  ||||||||| | |||| ||||| ||||| |||  || ||||||| ||||| |||| | ||| |||||||| |||||||||    
T  31644807 gcaaattctatcgtacactcaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgagttgttttttgaagaaaaatattatttt 31644708  T
Q  222 ttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataa---aattgaatttttatcgttcataatagagaactttgattat 317  Q
    |||||||||||||||||||||||||||| ||||||| |       | ||| ||||||     || ||||||||||| |||||||||||||||||||||||    
T  31644707 ttatcatttataattataatgattaaatcttattcatcaaaagtgtaaacgaaataattttttttaatttttatcgctcataatagagaactttgattat 31644608  T
Q  318 tttatatgataatatgttaaaaatttac 345  Q
    |||||| |||||||||| ||||| ||||    
T  31644607 tttatacgataatatgtaaaaaaattac 31644580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 18667790 - 18667700
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||||||||    
T  18667790 ccgataaataactatttatctcataaaattgatcgttaatttatagatttaggaattaagagtaccggtacaccacaatttacgagtgtac 18667700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 204 - 340
Target Start/End: Original strand, 12782737 - 12782877
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaa---attgaatttttatcgttcata 299  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |       | ||| |||| ||    || ||||||||||| |||||    
T  12782737 gaagaaaaatattattttttatcatttataattataatgattaaatcttattcatcaaaagtgtaaacgaaattaatttttttaatttttatcgctcata 12782836  T
Q  300 atagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  12782837 atagagaactttgattattttatacgataatatgtaaaaaa 12782877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 411 - 519
Target Start/End: Complemental strand, 29023722 - 29023613
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  |||||||||||||||||  |||||| ||||||| | |||||||    
T  29023722 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagt 29023623  T
Q  510 tcccttaaaa 519  Q
    ||||| ||||    
T  29023622 tccctgaaaa 29023613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 134 - 333
Target Start/End: Complemental strand, 29024002 - 29023799
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttata 233  Q
    ||||||| ||||||||| | |||| ||||| ||||| | |  || ||||||| ||||| | || | ||| |||||||| |||||||||||||||||||||    
T  29024002 gtacacccaacatatttgagtgtaccggtacaccaaccttttaattttataggtaaatgaattcttttttgaagaaaaatattattttttatcatttata 29023903  T
Q  234 attataatgattaaattttattca-cnnnnnnnttaaccaaataa---aattgaatttttatcgttcataatagagaactttgattattttatatgataa 329  Q
    |||||||||||||||| ||||||| |       | ||| ||||||     || ||||||||||| |||||||||||||||||||||||||||||  ||||    
T  29023902 attataatgattaaatcttattcatcaaaagtgtaaacaaaataattttttttaatttttatcgctcataatagagaactttgattattttatacaataa 29023803  T
Q  330 tatg 333  Q
    ||||    
T  29023802 tatg 29023799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 4509431 - 4509566
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| |||||||||| |||||| | |||| ||||| ||| |  ||  ||||| ||||||||||||||| | ||| |||||||| |||||||||    
T  4509431 gcaaattctatggtacacctaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttattttttgaagaaaaatattatttt 4509530  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | ||||| |||||||    
T  4509531 ttatcatttataattataataactaaatcttattca 4509566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 33574053 - 33574134
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||  |||||| |||||||    
T  33574053 aaattaatagttaaataagtttttttttgaagaaaaatattattttttatcatttataattataatatttaaatcttattca 33574134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 134 - 332
Target Start/End: Complemental strand, 4979481 - 4979273
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttata 233  Q
    ||||||| ||||||||| | |||||||||| |||||||||  || ||||| | ||||| |||| | ||  |||||||| ||||||| ||| | |||||||    
T  4979481 gtacacccaacatatttgagtgtatcggtacaccaaacctttaattttattggtaaatgagttattttatgaagaaaaatattattattttttatttata 4979382  T
Q  234 attataatgattaaattttattca-cnnnnnnnttaaccaaataaaa---------ttgaatttttatcgttcataatagagaactttgattattttata 323  Q
    |||||||||||||||| ||||||| |       | ||| ||||||||         |||||||||||||| | |||||||||||||||||||||||||||    
T  4979381 attataatgattaaatcttattcatcacaagcgtaaacgaaataaaattgatttttttgaatttttatcgcttataatagagaactttgattattttata 4979282  T
Q  324 tgataatat 332  Q
     ||||||||    
T  4979281 cgataatat 4979273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 6093954 - 6094044
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||| |||||||||| |||| | | ||||| ||||||||    
T  6093954 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaaacaagagtaccgatacatcttgatttacgagtgtac 6094044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 411 - 513
Target Start/End: Complemental strand, 31644513 - 31644410
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||| ||||| |||  |||||||||| ||||||  |||||| ||||||| | |||||||    
T  31644513 ccgacaaataactatttatttcataaaattgattgttagtttatagatttatgaagcaagagtaccgatacacctcaatttacgagtgtaccgtagaagt 31644414  T
Q  510 tccc 513  Q
    ||||    
T  31644413 tccc 31644410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 243238 - 243157
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  243238 aaattaatagttaaatgagttgttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 243157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 411 - 492
Target Start/End: Complemental strand, 4979202 - 4979121
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattta 492  Q
    |||| |||||| |||||||||||||||||||||| |||||||||| ||||| ||||||| | |||| ||||||| |||||||    
T  4979202 ccgataaataactatttatttcataaaattgatcattaatttataaatttatgaaataaaaataccagtacaccttaattta 4979121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 11763525 - 11763444
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| |||||||||| |||||||||||||||||| | ||||| |||||||    
T  11763525 aaattaatagttaaataagttgttttttgaagaaaaatattatttttgatcatttataattataataactaaatcttattca 11763444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 340
Target Start/End: Original strand, 6093674 - 6093882
Alignment:
Q  135 tacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataa 234  Q
    |||||| ||||||||| | |||||||||| || || | |  || ||||||| ||||| |||| | ||| |||||||| |||||||||| |||||| ||||    
T  6093674 tacacccaacatatttgagtgtatcggtacacaaaccttttaattttataggtaaatgagttgttttttgaagaaaaatattattttt-atcattaataa 6093772  T
Q  235 ttataatgattaaattttattcacnnnnnnnttaacc-aaataa---aattgaatttttatcgttcataatagagaactttgattattttatatgataat 330  Q
    ||||||||||||||| |||||||         ||| | ||||||   | ||  |||||||||| ||| |||||||||||||||||||||||||  |||||    
T  6093773 ttataatgattaaatcttattcatcaaaagtgtaatcgaaataatttatttttatttttatcgctcaaaatagagaactttgattattttatacaataat 6093872  T
Q  331 atgttaaaaa 340  Q
    |||| |||||    
T  6093873 atgtaaaaaa 6093882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 33574522 - 33574440
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| || ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  33574522 aaattcatagttaaatgagttgtttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 33574440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 714 - 787
Target Start/End: Original strand, 21970916 - 21970993
Alignment:
Q  714 gattgcttaatatgtgcccttaggacacaagttagcat----gaccaatataaaccgtgtttgcttgacccgtgacct 787  Q
    |||||||||||||||||| ||||| |||||||||||||    ||||||||||||||| ||| ||||||||| ||||||    
T  21970916 gattgcttaatatgtgcctttagggcacaagttagcatgaccgaccaatataaaccgagttggcttgacccttgacct 21970993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 416 - 522
Target Start/End: Original strand, 14779211 - 14779318
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac-atagaagttccct 514  Q
    ||||| |||||||||||||||||   |||||||||||||| | ||| |||| |||||||||||||| ||  | ||| |||||||||  ||||||||||||    
T  14779211 aaatagttatttatttcataaaaaatatcgttaatttataaaattatgaaaaaagagtaccggtacccctcattttgtgagtgtactgtagaagttccct 14779310  T
Q  515 taaaacaa 522  Q
     |||||||    
T  14779311 aaaaacaa 14779318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 26958462 - 26958544
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||||| || | ||| || ||||| ||||||||| |||||||||||||||||||| ||||||| |||||||    
T  26958462 aaattaatagttaaataaattattttttgaggaaaaatattatttttttatcatttataattataataattaaatcttattca 26958544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 11763410 - 11763350
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  |||||||||||||| || |||||||| ||||||||||||| |||||    
T  11763410 ttgaatttttatcactcataatagagaacattcattattttttatgataatatgtaaaaaa 11763350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 493
Target Start/End: Complemental strand, 20469125 - 20469057
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttat 493  Q
    |||||||||||||| |||| ||||||||||| ||||  ||| |||||||||| ||||||| ||||||||    
T  20469125 tttatttcataaaaatgatagttaatttatagatttttgaagtaagagtacccgtacaccttaatttat 20469057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 10091804 - 10091871
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattta 492  Q
    |||||| ||||||| | |||||||||||||  ||||| |||||| | |||||||||||||||||||||    
T  10091804 tttattacataaaaattatcgttaatttattgatttatgaaataggtgtaccggtacaccataattta 10091871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 414 - 501
Target Start/End: Complemental strand, 27109106 - 27109019
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||| | |||||||||||||| |||||||||||||||| |||||  ||| || | |||  ||||||| ||||||| ||||||||    
T  27109106 acaaataactctttatttcataaaaatgatcgttaatttataaatttataaaacaaaaatactagtacaccgtaatttaagagtgtac 27109019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 414 - 501
Target Start/End: Complemental strand, 27150903 - 27150816
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||| | |||||||||||||| |||||||||||||||| |||||  ||| || | |||  ||||||| ||||||| ||||||||    
T  27150903 acaaataactctttatttcataaaaatgatcgttaatttataaatttataaaacaaaaatactagtacaccgtaatttaagagtgtac 27150816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 515
Target Start/End: Complemental strand, 8549655 - 8549561
Alignment:
Q  423 tatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    ||||||||||||||||  |||||||||||||||| | ||| |||| ||||||| |||||||||  | ||| |||||||| | |||||||||||||    
T  8549655 tatttatttcataaaaaatgatcgttaatttataaaattatgaaaaaagagtatcggtacacctcattttgtgagtgtaccgtagaagttccctt 8549561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 9661753 - 9661874
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactatta--tt 219  Q
    ||||||| ||| ||||||| || |||||| | |||| ||||| ||| |  ||  ||||| |||||||||| |||| | ||| |||||||| |||||  ||    
T  9661753 gcaaattctatggtacacccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgagttgttttttgaagaaaaatattatttt 9661852  T
Q  220 ttttatcatttataattataat 241  Q
    ||||||||||||||||||||||    
T  9661853 ttttatcatttataattataat 9661874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 20193372 - 20193430
Alignment:
Q  24 ttataaaattgtttaccctttaaaaagaaagtcaagccaacattcaatttatgtacttg 82  Q
    ||||||||||||||||  |||||||||||||| ||| |||||||||||| ||| |||||    
T  20193372 ttataaaattgtttactttttaaaaagaaagtaaagacaacattcaattgatgaacttg 20193430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 22087395 - 22087453
Alignment:
Q  24 ttataaaattgtttaccctttaaaaagaaagtcaagccaacattcaatttatgtacttg 82  Q
    ||||||||||||||||  |||||||||||||| ||| |||||||||||| ||| |||||    
T  22087395 ttataaaattgtttactttttaaaaagaaagtaaagacaacattcaattgatgaacttg 22087453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 516
Target Start/End: Original strand, 1339171 - 1339264
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctta 516  Q
    |||||||||| ||| ||||| |||||||||||| |||  |||| ||||||||||||||||   || || |||||||| ||||||||||||||||    
T  1339171 tttatttcattaaagtgatctttaatttatatattttttgaaaaaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccctta 1339264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 6975012 - 6974971
Alignment:
Q  214 attattttttatcatttataattataatgattaaattttatt 255  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  6975012 attattttctatcatttataattataataattaaattttatt 6974971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 35224919 - 35224827
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| || |||||||||||||   || || |||||||| |||||||||||||||    
T  35224919 tttatttcattaaagtgatctttaatttatatattttgtgaaacaatagtaccggtacactcaaaattgtgagtgtaccatagaagttccctt 35224827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 4509600 - 4509659
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaa 339  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| ||||    
T  4509600 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaa 4509659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 513
Target Start/End: Original strand, 4576692 - 4576791
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac-atagaagttccc 513  Q
    ||||| |||||||||||| ||||  | |||||||||||||| | ||| |||| |||||||||||||||||  | ||| ||||| ||| ||||||||||||    
T  4576692 aaatagttatttatttcacaaaaaataatcgttaatttataaaattatgaaaaaagagtaccggtacacctcattttgtgagtctacaatagaagttccc 4576791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 484
Target Start/End: Complemental strand, 6974807 - 6974749
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||||||||||||| ||| |||||||| || ||||| ||| ||||||||||||||||||    
T  6974807 tttatttcataaaat-gattgttaatttttaaatttatgaagtaagagtaccggtacacc 6974749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 8549960 - 8549825
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||||| || |||||| | |||||||||| ||  |  ||  ||||| || ||||||| |||| | ||| |||||||| |||||||||    
T  8549960 gcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagttattttttgaagaaaaatattatttt 8549861  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
     ||||||||||| || |||| | ||||| |||||||    
T  8549860 ctatcatttatatttgtaataactaaatcttattca 8549825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 18871240 - 18871330
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| |||||||||||| |||  |||| ||||||||||||||||   || || |||||||| |||||||||||||    
T  18871240 tttatttcattaaagtgatctttaatttatatattttttgaaaaaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccc 18871330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 187 - 257
Target Start/End: Original strand, 22755307 - 22755377
Alignment:
Q  187 taaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||| | ||| |||||||| |||| |||||||||| ||||||||||||| | ||||| |||||||    
T  22755307 taaatgagttgttttttgaagaaaaatatttttttttatcacttataattataataactaaatcttattca 22755377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 34969749 - 34969839
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    ||||||| || ||| |||||||||||||||| |||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||    
T  34969749 tttattttattaaagtgatcgttaatttataaattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccc 34969839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 755
Target Start/End: Original strand, 357296 - 357325
Alignment:
Q  726 tgtgcccttaggacacaagttagcatgacc 755  Q
    ||||||||||||||||||||||||||||||    
T  357296 tgtgcccttaggacacaagttagcatgacc 357325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 2564910 - 2564955
Alignment:
Q  295 tcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||| |||||| ||||||||||| ||||||||||||| |||||    
T  2564910 tcataattgagaacattgattattttttatgataatatgtaaaaaa 2564955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 516
Target Start/End: Original strand, 8858029 - 8858078
Alignment:
Q  468 aagagtaccggtacaccataatttatgagtgta-catagaagttccctta 516  Q
    |||||||| ||||||||| | |||||||||||| ||||||||||||||||    
T  8858029 aagagtacaggtacaccacattttatgagtgtaccatagaagttccctta 8858078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 514
Target Start/End: Original strand, 33574667 - 33574760
Alignment:
Q  423 tatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||| |||||||  |||||||||||||||| | ||| |||  |||||||||||||||||  | ||| |||||||| | ||||||||||||    
T  33574667 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccct 33574760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 514
Target Start/End: Original strand, 33574845 - 33574938
Alignment:
Q  423 tatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||| |||||||  |||||||||||||||| | ||| |||  |||||||||||||||||  | ||| |||||||| | ||||||||||||    
T  33574845 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccct 33574938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 2e-82; HSPs: 117)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 122 - 345
Target Start/End: Original strand, 23795789 - 23796013
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    |||||||||||||||||||||| |||||| | |||||||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  23795789 gcaaattttatcgtacacctaatatatttgagtgtatcggtacaccaaacttaaaaatttatagttaaataagttgtgttttgaagaaaactattatttt 23795888  T
Q  222 ttatcatttataattataatgattaaattttattcac-nnnnnnnttaaccaaataaaattgaatttttatcgttcataatagagaactttgattatttt 320  Q
    |||||||||||||||||||||||||||| ||||||||        ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23795889 ttatcatttataattataatgattaaatcttattcacaaaaaacattaacgaaataaaattgaatttttatcgctcataatagagaactttgattatttt 23795988  T
Q  321 atatgataatatgttaaaaatttac 345  Q
    |||||||||||||||||||||||||    
T  23795989 atatgataatatgttaaaaatttac 23796013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 134 - 345
Target Start/End: Original strand, 8433450 - 8433663
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttat 232  Q
    ||||||| ||||||||| | |||| ||||| ||||||||   ||| |||||||||||| ||||   ||| |||||||| ||||||||| |||||||||||    
T  8433450 gtacacccaacatatttgagtgtaccggtacaccaaacccttaaaattatagttaaatgagttggtttttgaagaaaaatattatttttttatcatttat 8433549  T
Q  233 aattataatgattaaattttattcac-nnnnnnnttaaccaaataaaattgaatttttatcgttcataatagagaactttgattattttatatgataata 331  Q
    ||||||||||||||||| ||||||||        | ||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |    
T  8433550 aattataatgattaaatcttattcacaaaaaacatcaacgaaataaaattgaatttttatcgctcataatagagaacttttattattttatacgataaca 8433649  T
Q  332 tgttaaaaatttac 345  Q
    ||| ||||| ||||    
T  8433650 tgtaaaaaaattac 8433663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 176 - 345
Target Start/End: Complemental strand, 54262885 - 54262714
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattcac-nnnnnnnttaaccaa 273  Q
    |||||||||||||||| |||| | ||| |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||        | ||| ||    
T  54262885 aaatttatagttaaatgagttattttttgaagaaaaatattatttttttatcatttataattataatgattaaatcttattcacaaaaaacatcaacgaa 54262786  T
Q  274 ataaaattgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| |||| ||||| ||||    
T  54262785 ataaaattgaatttttatcgttcataatagagaacttttattattttatgcgataacatgtaaaaaaattac 54262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 122 - 340
Target Start/End: Complemental strand, 45636087 - 45635858
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| || |||||||| ||||||||| | |||| ||||||||||||||   ||||||||||||||||||||| | ||| |||||||| |||||||||    
T  45636087 gcaaattctaccgtacacccaacatatttgagtgtaccggtataccaaacccttaaatttatagttaaataagttattttttgaagaaaaatattatttt 45635988  T
Q  222 ttatcatttataattataatgatt-aaattttattca-cnnnnnnnttaaccaaataaaa---------ttgaatttttatcgttcataatagagaactt 310  Q
    |||||||||||||||||||||||| ||||  |||||| |       | ||| || |||||         |||||||||||||| ||||||||||||||||    
T  45635987 ttatcatttataattataatgattaaaatcgtattcaccaaaagcatcaacgaattaaaattgatttttttgaatttttatcgctcataatagagaactt 45635888  T
Q  311 tgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||||| |||||||||| |||||    
T  45635887 tgattattttatacgataatatgtaaaaaa 45635858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 411 - 499
Target Start/End: Original strand, 23796080 - 23796168
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgt 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| |||||    
T  23796080 ccgacaaataattatttatttcataaaattgatcgttaatttatagatttaggaagtaagagtaccggtacaccagaatttataagtgt 23796168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 122 - 340
Target Start/End: Complemental strand, 50030157 - 50029928
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| || |||||||| ||||||||| | ||||  |||||||||||||   |||||||||||||||| |||| | ||| |||||||| |||||||||    
T  50030157 gcaaattctaccgtacacccaacatatttgagtgtacaggtataccaaacccttaaatttatagttaaatgagttattttttgaagaaaaatattatttt 50030058  T
Q  222 ttatcatttataattataatgatt-aaattttattca-cnnnnnnnttaaccaaataaaa---------ttgaatttttatcgttcataatagagaactt 310  Q
    |||||||||||||||||||||||| |||| ||||||| |       | ||| || |||||         |||||||||||||| ||||||||||||||||    
T  50030057 ttatcatttataattataatgattaaaatcttattcaccaaaagcatcaacgaattaaaattgatttttttgaatttttatcgctcataatagagaactt 50029958  T
Q  311 tgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||||| |||||||||| |||||    
T  50029957 tgattattttatacgataatatgtaaaaaa 50029928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 134 - 345
Target Start/End: Original strand, 29806030 - 29806245
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagtt-aaataagttttgtttcgaagaaaactattattttttatcatttat 232  Q
    ||||||||||||||||| | || | ||||| || ||||||  |||||||||||| |||| |||| | ||| |||||||| ||||||||||||||||||||    
T  29806030 gtacacctaacatatttgagtgcaccggtacacaaaacctttaaatttatagtttaaatgagttgttttttgaagaaaaatattattttttatcatttat 29806129  T
Q  233 aattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattgaatttttat--cgttcataatagagaactttgattattttatatgataa 329  Q
    ||||||||||||||||| ||||||| |       | ||  |||||||||||| ||||| |    ||  ||||||||||||||||||||||||||||||||    
T  29806130 aattataatgattaaatcttattcaccaaaagcgtcaataaaataaaattgatttttttttaaatttttaatagagaactttgattattttatatgataa 29806229  T
Q  330 tatgttaaaaatttac 345  Q
    ||||  ||||||||||    
T  29806230 tatgacaaaaatttac 29806245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 134 - 345
Target Start/End: Original strand, 19914054 - 19914270
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttat 232  Q
    ||||||| ||||||||| | |||| ||||||||||| |||  || ||||||| ||||| |||| | ||| |||||||| ||||||||| |||||||||||    
T  19914054 gtacacccaacatatttgagtgtaccggtataccaaccctttaattttataggtaaatgagttgttttttgaagaaaaatattatttttttatcatttat 19914153  T
Q  233 aattataatgattaaattttattca-cnnnnnnnttaaccaaataa---aattgaatttttatcgttcataatagagaactttgattattttatatgata 328  Q
    ||||||||||||||||| ||||||| |       | ||| ||||||     || ||||||||||| |||||||||| |||||||||||||||||  ||||    
T  19914154 aattataatgattaaatcttattcatcaaaagtgtaaacaaaataattttttttaatttttatcgctcataatagataactttgattattttatccgata 19914253  T
Q  329 atatgttaaaaatttac 345  Q
    |||||| ||||| ||||    
T  19914254 atatgtaaaaaaattac 19914270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 26885377 - 26885242
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||||||| ||||||| || |||||| | |||||||||| |||||  ||  ||||| |||||||||| |||| | ||| |||||||| |||||||||    
T  26885377 gcaaattttatggtacacccaatatatttgagtgtatcggtacaccaattctttaaattaatagttaaatgagttgttttttgaagaaaaatattatttt 26885278  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | ||||| |||||||    
T  26885277 ttatcatttataattataataactaaatcttattca 26885242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 42622255 - 42622120
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||||||| ||||||| || |||||| | |||| ||||| ||| |  ||  ||||| ||||||||||||||| | ||| || ||||| |||||||||    
T  42622255 gcaaattttatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttattttttgaggaaaaatattatttt 42622156  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||||||||| |||||||    
T  42622155 ttatcatttataattataatgattaaatcttattca 42622120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 411 - 513
Target Start/End: Complemental strand, 52024541 - 52024438
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtaca-tagaagt 509  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||| ||||||||| |||||||  |||||| ||||||||| |||||||    
T  52024541 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaaacaagagtacctgtacacctcaatttacgagtgtacagtagaagt 52024442  T
Q  510 tccc 513  Q
    ||||    
T  52024441 tccc 52024438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 411 - 497
Target Start/End: Original strand, 19914337 - 19914423
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagt 497  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||  ||||||||||||||||| ||||||| ||||    
T  19914337 ccgacaaataactatttatttcataaaattgatcgttaatttatagatttatgaagcaagagtaccggtacaccttaatttacgagt 19914423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 411 - 519
Target Start/End: Original strand, 8966234 - 8966343
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| | ||||||||||||||||||| ||||||  ||| |||||||||  | ||||||||||||||| ||||||||||||||| | |||||||    
T  8966234 ccgacaaataactttttatttcataaaattgattgttaatgcataaatttaggaagcaggagtaccggtacaccttaatttatgagtgtaccgtagaagt 8966333  T
Q  510 tcccttaaaa 519  Q
    ||||||||||    
T  8966334 tcccttaaaa 8966343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 411 - 515
Target Start/End: Original strand, 9252156 - 9252261
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || || |||  |||||||||||||||||  |||||| ||||||| | |||||||    
T  9252156 ccgacaaataactatttatttcataaaattgatcgttaatttatagatatatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagt 9252255  T
Q  510 tccctt 515  Q
    ||||||    
T  9252256 tccctt 9252261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 5528857 - 5528930
Alignment:
Q  272 aaataaaattgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  5528857 aaataaaattgaatttttattgctcataatagagaactttgattatttcatacgataatatgtaaaaaatttac 5528930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 15996875 - 15996956
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  15996875 aaattaatagttaaatgagttgttttttgaagaaaaatattattttttatcatttataattataataattaaattttattca 15996956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 515
Target Start/End: Original strand, 29806316 - 29806417
Alignment:
Q  415 caaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||||||  |||||||||||||||||  |||||  ||||||| | |||||||||||    
T  29806316 caaataattatttatttcataaaattaattgttaatttatagatttaggaagcaagagtaccggtacacctcaatttgcgagtgtaccgtagaagttccc 29806415  T
Q  514 tt 515  Q
    ||    
T  29806416 tt 29806417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 45602268 - 45602203
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45602268 ttgaatttttaacgctcataatagagaactttgattattttatatgataatatgtcaaaaatttac 45602203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 25482637 - 25482513
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttat 232  Q
    |||||||||| |||||| | |||||||||| ||| |  ||  ||||| |||||||||| |||| | ||| |||||||| ||||||||||| |||||||||    
T  25482637 gtacacctaatatatttgagtgtatcggtacacctattctttaaattaatagttaaatgagttgttttttgaagaaaaatattatttttttatcatttat 25482538  T
Q  233 aattataatgattaaattttattca 257  Q
    ||||||||| |||||||||||||||    
T  25482537 aattataataattaaattttattca 25482513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 195 - 345
Target Start/End: Complemental strand, 52024762 - 52024608
Alignment:
Q  195 ttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaa---attgaattttta 290  Q
    |||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |       | ||| |||||     |||  |||||||    
T  52024762 tttttttttgaagaaaaatattattttttatcatttaaaattataatgattaaatcttattcatcaaaagtgtaaacaaaatatttttattttattttta 52024663  T
Q  291 tcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
     || ||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  52024662 gcgctcataatagagaactttgattattttatacgataatatgttaaaaaattac 52024608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 123 - 257
Target Start/End: Original strand, 40477759 - 40477893
Alignment:
Q  123 caaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttt 222  Q
    |||||| ||| ||||||| || |||||| | |||| ||||| ||| |  ||  ||||| ||||||||||||||| | ||| |||||||| ||||||||||    
T  40477759 caaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttattttttgaagaaaaatattattttt 40477858  T
Q  223 tatcatttataattataatgattaaattttattca 257  Q
    ||||||||||||||||||| | ||||| |||||||    
T  40477859 tatcatttataattataataactaaatcttattca 40477893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 414 - 492
Target Start/End: Complemental strand, 54262644 - 54262566
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattta 492  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||| |||  ||||||| |||||||||||||||||    
T  54262644 acaaataactatttatttcataaaattgattgttaatttatagatttaagaagcaagagtatcggtacaccataattta 54262566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 411 - 492
Target Start/End: Original strand, 8433729 - 8433810
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattta 492  Q
    ||||||||||| |||||||||||||||||| || ||||||||||| ||||| |||  |||||||||||||||||| ||||||    
T  8433729 ccgacaaataactatttatttcataaaattaattgttaatttataaatttaagaagcaagagtaccggtacaccacaattta 8433810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 25834286 - 25834367
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| ||| |||| ||||||||||||||||||||||||||||| ||||||| |||||||    
T  25834286 aaattaatagttaaataagttgttttttgaaaaaaaatattattttttatcatttataattataataattaaatcttattca 25834367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 45538996 - 45538915
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  45538996 aaattaatagttaaataagttattttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 45538915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 52162686 - 52162775
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta 500  Q
    |||| |||||| ||||| ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||   |||||| |||||||    
T  52162686 ccgataaataactatttgttttataaaattgatcgttaatttatagatttaggaaacaagagtaccggtacactgcaatttacgagtgta 52162775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 8966086 - 8966146
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  8966086 ttgaatttttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaa 8966146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 413 - 515
Target Start/End: Complemental strand, 26409732 - 26409628
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| | |||||||||||||| |||||||||||||||| |||| | |||| |||||||||||||||| | ||||| |||||||| | ||||||||    
T  26409732 gacaaataactttttatttcataaaaatgatcgttaatttataaattttgtgaaacaagagtaccggtacactaaaatttctgagtgtaccgtagaagtt 26409633  T
Q  511 ccctt 515  Q
    |||||    
T  26409632 ccctt 26409628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 9251859 - 9251994
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||||||  ||||||  ||||||||| | |||| ||||| ||||| | |  || ||||||  ||||| |||| | ||| ||| |||| |||||||||    
T  9251859 gcaaattttacggtacactcaacatatttgagtgtaccggtacaccaaccttttaattttataagtaaatgagttgttttttgaaaaaaaatattatttt 9251958  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||||||||| |||||||    
T  9251959 ttatcatttataattataatgattaaatcttattca 9251994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 416 - 510
Target Start/End: Complemental strand, 50029849 - 50029754
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||| ||||||||||||||||||||| |||||| |||| |||||||||  | |||||||| |||||| || |||||||||||| ||||||||||    
T  50029849 aaataactatttatttcataaaattgattgttaatgtataaatttaggaagcaggagtaccgatacaccttagtttatgagtgtaccatagaagtt 50029754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 516
Target Start/End: Complemental strand, 35749025 - 35748919
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||| ||||| |||  |||||||||| ||||||   ||||| ||||||| | |||||||    
T  35749025 ccgacaaataactatttatttgataaaattgatcattaatttatagatttatgaagcaagagtaccgatacacctctatttacgagtgtatcgtagaagt 35748926  T
Q  510 tccctta 516  Q
    |||||||    
T  35748925 tccctta 35748919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 23456509 - 23456590
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||||| ||| |||||||| |||||||||||||||||||| |||||||| | ||||| |||||||    
T  23456509 aaattaatagttaaatgagtttttttttgaagaaaaatattattttttatcatttattattataataactaaatcttattca 23456590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 142 - 257
Target Start/End: Complemental strand, 35749299 - 35749184
Alignment:
Q  142 aacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataa 240  Q
    ||||||||| | |||||||||| ||||| |||  || ||||||| ||||| |||| || ||| |||||||| ||||||||||||||||||||| ||||||    
T  35749299 aacatatttgagtgtatcggtacaccaaccctttaattttataggtaaatgagttgtttttttgaagaaaaatattattttttatcatttatagttataa 35749200  T
Q  241 tgattaaattttattca 257  Q
    | ||||||| |||||||    
T  35749199 t-attaaatcttattca 35749184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 37359897 - 37359776
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttata 233  Q
    ||||||| ||||||||| | |||| ||||| ||||| |||  || ||||| | |||||||||| | ||  |||||||| ||||||||||||||||||||     
T  37359897 gtacacccaacatatttgagtgtaccggtacaccaaccctttaattttatgggtaaataagttgttttatgaagaaaaatattattttttatcatttat- 37359799  T
Q  234 attataatgattaaattttattca 257  Q
     ||||||||||||||| |||||||    
T  37359798 -ttataatgattaaatcttattca 37359776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 415 - 518
Target Start/End: Complemental strand, 45602123 - 45602019
Alignment:
Q  415 caaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtaca-tagaagttccc 513  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||| |||  |||| ||||| ||||||  |||||  ||||||||| || ||||||||    
T  45602123 caaataactatttatttcataaaattaatcgttaatttatagatttaagaagcaagaataccgatacacctcaatttgcgagtgtacagtataagttccc 45602024  T
Q  514 ttaaa 518  Q
    |||||    
T  45602023 ttaaa 45602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 9506904 - 9507039
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| |||  |||||| || |||||| | || ||||||| |||||  ||  ||||| |||||||||| |||| | ||| ||| |||| |||||||||    
T  9506904 gcaaattctatgatacacccaatatatttgagtgcatcggtacaccaattctttaaattaatagttaaatgagttgttttttgaaaaaaaatattatttt 9507003  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | ||||| |||||||    
T  9507004 ttatcatttataattataataactaaatcttattca 9507039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 9514879 - 9515014
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| |||  |||||| || |||||| | || ||||||| |||||  ||  ||||| |||||||||| |||| | ||| ||| |||| |||||||||    
T  9514879 gcaaattctatgatacacccaatatatttgagtgcatcggtacaccaattctttaaattaatagttaaatgagttgttttttgaaaaaaaatattatttt 9514978  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | ||||| |||||||    
T  9514979 ttatcatttataattataataactaaatcttattca 9515014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 35749153 - 35749094
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatt 342  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||||||| |||||||    
T  35749153 aatttttatcgctcataatagagaactttgattactttatacgataatatgtaaaaaatt 35749094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 52162417 - 52162531
Alignment:
Q  142 aacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    |||||||||  ||||| | ||| |||||||||  |||||||||||||||| |||| | |||  ||||||| |||||||||||||| | ||| ||||||||    
T  52162417 aacatatttgcatgtacctgtacaccaaacctttaaatttatagttaaatgagttatttttttaagaaaaatattattttttatc-tctatgattataat 52162515  T
Q  242 gattaaattttattca 257  Q
    |||||||| |||||||    
T  52162516 gattaaatcttattca 52162531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 412 - 517
Target Start/End: Original strand, 5528998 - 5529104
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||||| ||| |||||||||||||||||| |||||||||| |||| |||   |||||||||||||||||  | |||| ||||||| | |||||| |    
T  5528998 cgacaaataactatctatttcataaaattgatcattaatttatagatttgggatggaagagtaccggtacacctcattttaagagtgtaccgtagaagct 5529097  T
Q  511 cccttaa 517  Q
    |||||||    
T  5529098 cccttaa 5529104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 26457307 - 26457225
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| || ||| |||||||| |||||||||| |||||||||||||||||| | ||||| |||||||    
T  26457307 aaattaatagttaaataagttgtttttttgaagaaaaatattatttttaatcatttataattataataactaaatcttattca 26457225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 40473889 - 40473971
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaac-tattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| ||||||||  ||||||||||||||||||||||||||||| | ||||| |||||||    
T  40473889 aaattaatagttaaataagttatcttttgaagaaaaaatattattttttatcatttataattataataactaaatcttattca 40473971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 41282886 - 41282804
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| ||||||||||| |||||||||||||||||| | ||||| |||||||    
T  41282886 aaattaatagttaaataagttgttttttgaagaaaaatattatttttttatcatttataattataataactaaatcttattca 41282804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 7352519 - 7352438
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||| |||| | ||| ||| |||  ||||||||||||||||||||||||||||| | ||||| |||||||    
T  7352519 aaatttatagttaaatgagttattttttgaaaaaatatattattttttatcatttataattataataactaaatcttattca 7352438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 9252026 - 9252083
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||||||| |||||    
T  9252026 aatttttatcgctcataaaagagaactttgattattttatacgataatatgtaaaaaa 9252083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 37128127 - 37128074
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  37128127 gaagaaaaatattattttttatcatttataattataataactaaattttattca 37128074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 40727700 - 40727619
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||| ||||||||||| | ||| || ||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  40727700 aaattaataattaaataagttgttttttgaggaaaaatattattttttatcatttataattataataactaaatcttattca 40727619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 51344429 - 51344494
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    ||||| ||||||||||||||| | ||| |||| ||| |||||||||||||||||||||||||||||    
T  51344429 aaattaatagttaaataagttgttttttgaagcaaaatattattttttatcatttataattataat 51344494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 1129480 - 1129401
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattc 256  Q
    ||||| ||||||||||||||| | ||| |||||||| |||| |||||||||||||||||||||||| | ||||| ||||||    
T  1129480 aaattaatagttaaataagttgttttttgaagaaaaatatt-ttttttatcatttataattataataactaaatcttattc 1129401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 24170015 - 24170067
Alignment:
Q  205 aagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  24170015 aagaaaaatattattttttatcatttataattataataactaaattttattca 24170067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 8965970 - 8966053
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgatt-aaattttattcac 258  Q
    |||||||||||||||| | || | ||| |||||||| |||| |||||| ||||||||||||||||||||| |||| ||||||||    
T  8965970 aaatttatagttaaatgaattatttttagaagaaaaatatttttttttgtcatttataattataatgattaaaatcttattcac 8966053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 33006354 - 33006433
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttatt 255  Q
    ||||| |||||||||| |||| | ||| |||||||| |||||||||||||||||||| |||||||| | ||||| |||||    
T  33006354 aaattaatagttaaatgagttgttttttgaagaaaaatattattttttatcatttattattataataactaaatcttatt 33006433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 49951014 - 49950919
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaaa 518  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||||||||||||||||||||   || || |||||||| ||||||||||||| ||||    
T  49951014 tttatttcattaaagtgatctttaatttatatattttgtgaaataagagtaccggtacactcaaaattgtgagtgtaccatagaagttcccataaa 49950919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 1021030 - 1021112
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||||||| |||||||||||||||||||| | ||||| |||||||    
T  1021030 aaattcatagttaaatgagttgttttttgaagaaaaatattatttttttatcatttataattataataactaaatcttattca 1021112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 42658181 - 42658107
Alignment:
Q  184 agttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattcac 258  Q
    |||||||| |||| | ||| |||||||| |||||  |||||||||||||||||||||| ||||||| ||||||||    
T  42658181 agttaaatgagttgttttttgaagaaaaatattacattttatcatttataattataataattaaatcttattcac 42658107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 43745699 - 43745617
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| || ||||| ||||||||||| |||||||||||||||||| | ||||| |||||||    
T  43745699 aaattaatagttaaataagttgttttttgaggaaaaatattatttttttatcatttataattataataactaaatcttattca 43745617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 719 - 757
Target Start/End: Original strand, 45628444 - 45628482
Alignment:
Q  719 cttaatatgtgcccttaggacacaagttagcatgaccaa 757  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45628444 cttaatatgtgcccttaggacacaagttagcatgaccaa 45628482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 513
Target Start/End: Complemental strand, 45635782 - 45635681
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataaga-gtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| ||||||||||||| ||||||| |||||| |||| ||||| ||||  ||| ||||||||||||  ||||||||||||||| | ||||||||    
T  45635782 gacaaataactatttatttcatagaattgattgttaatgtataaattta-gaaagcagaggtaccggtacactttaatttatgagtgtaccgtagaagtt 45635684  T
Q  511 ccc 513  Q
    |||    
T  45635683 ccc 45635681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 416 - 501
Target Start/End: Complemental strand, 4817174 - 4817089
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||| |||||||| ||||||| |||||||||||||||| | |||  || ||||||||||||||||||  | ||| |||||||||    
T  4817174 aaataactatttattacataaaaatgatcgttaatttataaaattataaagtaagagtaccggtacacctcattttgtgagtgtac 4817089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 25834401 - 25834466
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||  |||||||||||||| || |||||||| ||||||||||||| ||||| ||||    
T  25834401 ttgaatttttatcactcataatagagaacattcattattttttatgataatatgtaaaaaaattac 25834466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 45602375 - 45602302
Alignment:
Q  186 ttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattcac 258  Q
    |||||| |||| | ||| |||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  45602375 ttaaatgagttgttttttgaagaaaaatattatttttttatcatttataaatataatgattaaatcttattcac 45602302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 48825753 - 48825673
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| ||| |||| |||| |||||||||||||||||||||||| | ||||| |||||||    
T  48825753 aaattaatagttaaataagttgttttttgaaaaaaaatatt-ttttttatcatttataattataataactaaatcttattca 48825673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 14654134 - 14654054
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattc 256  Q
    ||||| |||||||||  |||| | |||||||||||| |||| ||||||||| |||||||||||||| | ||||| ||||||    
T  14654134 aaattaatagttaaaagagttgtttttcgaagaaaaatatttttttttatcttttataattataataactaaatcttattc 14654054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 413 - 516
Target Start/End: Complemental strand, 26457055 - 26456951
Alignment:
Q  413 gacaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtacatagaagttc 511  Q
    ||||||||  |||||||| |||||||  |||||||||||||||| | ||| |||  | |||||||||| ||||  | ||||||||||||| |||||||||    
T  26457055 gacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggttcacctcactttatgagtgtacgtagaagttc 26456956  T
Q  512 cctta 516  Q
    |||||    
T  26456955 cctta 26456951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 32720303 - 32720395
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| |||||||||| |||||   || || |||||||| |||||||||||||||    
T  32720303 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccgatacactcaaaattgtgagtgtaccatagaagttccctt 32720395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 416 - 514
Target Start/End: Complemental strand, 37520801 - 37520701
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    ||||| |||||||||||||||||  |||||||||||||||| | ||| |||  |||||||||||||||||  | ||| |||||||| | |||||||||||    
T  37520801 aaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccc 37520702  T
Q  514 t 514  Q
    |    
T  37520701 t 37520701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 416 - 496
Target Start/End: Complemental strand, 52776547 - 52776468
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgag 496  Q
    |||||||| |||||||||||||||  |||||||| ||||| ||||  |||||| |||||||||||||||  ||||||||||    
T  52776547 aaataattctttatttcataaaata-atcgttaaattataaatttttgaaatatgagtaccggtacacctcaatttatgag 52776468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 14460501 - 14460592
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||| ||| ||||| ||||||||| ||||| | |||| ||||||||||||||||   || ||||||||||| ||||||||||||||    
T  14460501 tttatttcattaaagtgatctttaatttatttattttgtgaaacaagagtaccggtacactcaaaattatgagtgtaccatagaagttccct 14460592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 39678183 - 39678234
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttatt 255  Q
    |||||||| |||||||||||||||| |||||||||||| ||||||| |||||    
T  39678183 gaagaaaaatattattttttatcatctataattataataattaaatcttatt 39678234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 40784878 - 40784795
Alignment:
Q  174 aaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||||| ||||||||||  |||   ||| ||||||||  |||||||||||||||||||||||||||| | ||||| |||||||    
T  40784878 aaaaattaatagttaaatgggttgatttttgaagaaaaacattattttttatcatttataattataataactaaatcttattca 40784795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 426 - 484
Target Start/End: Original strand, 42622929 - 42622985
Alignment:
Q  426 ttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    |||||||||||||  ||||||||||||||| ||||| |||| |||||||||||||||||    
T  42622929 ttatttcataaaa--gatcgttaatttataaatttatgaaaaaagagtaccggtacacc 42622985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 10279351 - 10279267
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactat---tattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||   |||||||||||||||||||||||||| | ||||| |||||||    
T  10279351 aaattaatagttaaatgagttgttttttgaagaaaaatatatatattttttatcatttataattataataactaaatcttattca 10279267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 26849979 - 26850061
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactatta-ttttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||| |||||||||||||||||||||| | | ||||| |||||||    
T  26849979 aaattcatagttaaatgagttgttttttgaagaaaaatattatttttttatcatttataattatagtaactaaatcttattca 26850061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 517
Target Start/End: Complemental strand, 36019506 - 36019412
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaa 517  Q
    |||||||||| ||| || || |||||||||||| |||| |||| ||||||||||||||||   || || |||||||| |||||||||||||||||    
T  36019506 tttatttcattaaagtggtctttaatttatatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttcccttaa 36019412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 37567535 - 37567625
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| |||||||||| |||||   || ||||||||||| |||||||||||||    
T  37567535 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccgatacactcaaaattatgagtgtaccatagaagttccc 37567625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 514
Target Start/End: Original strand, 42478990 - 42479092
Alignment:
Q  414 acaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttc 511  Q
    ||||||| ||||||||| |||||||  | |||||||||||||| | ||| |||| ||||||||||||||||| || ||| ||| |||| | |||||||||    
T  42478990 acaaatagttatttattacataaaaaattatcgttaatttataaaattatgaaacaagagtaccggtacaccttattttgtgaatgtaccgtagaagttc 42479089  T
Q  512 cct 514  Q
    |||    
T  42479090 cct 42479092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 483
Target Start/End: Complemental strand, 48388860 - 48388790
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    ||||||| || |||||||||| ||| ||||||||||||||||||||| | |||| ||||||||| ||||||    
T  48388860 acaaatacttttttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccagtacac 48388790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 51235838 - 51235928
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||    
T  51235838 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccc 51235928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 517
Target Start/End: Complemental strand, 52782249 - 52782155
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaa 517  Q
    |||||||||| ||| | ||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||||||    
T  52782249 tttatttcattaaagtaatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttcccttaa 52782155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 54788411 - 54788493
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactat-tattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||| | |||||||||||||||||||||||| | ||||| |||||||    
T  54788411 aaattaatagttaaatgagttgtattttgaagaaaaatatattttttttatcatttataattataataactaaatcttattca 54788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 512
Target Start/End: Complemental strand, 35352280 - 35352191
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcc 512  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| ||||||||||||    
T  35352280 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttcc 35352191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 39253170 - 39253117
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| |||||| |||||||||||||||||||||| | ||||| |||||||    
T  39253170 gaagaaaaatattatcttttatcatttataattataataactaaatcttattca 39253117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 491
Target Start/End: Complemental strand, 52082143 - 52082066
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattt 491  Q
    |||||||| | |||||||||||||| | || ||| ||||||| ||||  ||| |||||||||||||||||| ||||||    
T  52082143 acaaataactttttatttcataaaaataatagttcatttataaatttttgaagtaagagtaccggtacaccttaattt 52082066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 482
Target Start/End: Complemental strand, 55365475 - 55365406
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtaca 482  Q
    ||||||| || |||||||||| ||| ||||||||||||||||||||| | |||| ||||||||| |||||    
T  55365475 acaaatacttttttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccagtaca 55365406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 413 - 515
Target Start/End: Original strand, 882029 - 882133
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| | ||||||| |||||| |||||||||||||||| |||| | |||| || |||| |||||||| | |||||  ||||||| | ||||||||    
T  882029 gacaaataactttttattttataaaaatgatcgttaatttataaattttgtgaaacaaaagtatcggtacactaaaatttccgagtgtaccgtagaagtt 882128  T
Q  511 ccctt 515  Q
    |||||    
T  882129 ccctt 882133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 7862152 - 7862287
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattt 220  Q
    ||||||||||| |||||||||| |||||| | | || ||||| ||  |  ||  ||||| ||| ||||||||||| || ||| |||||||| ||||||||    
T  7862152 gcaaattttatggtacacctaatatatttgagtataccggtacacatactctttaaattaataattaaataagttgtttttttgaagaaaaatattattt 7862251  T
Q  221 tttatcatttataattataatgattaaattttattca 257  Q
    | ||||||||||||||||| | | ||||| |||||||    
T  7862252 t-tatcatttataattatagtaactaaatcttattca 7862287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 14654020 - 14653960
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| ||||||||||| || |||||||||| |||||    
T  14654020 ttgaatttttatcactcataattgagaaccttgattattttttacgataatatgtaaaaaa 14653960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 29389049 - 29388966
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt--atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||||||||||  |||||||||||||||| | | ||||| |||||||    
T  29389049 aaattcatagttaaatgagttgttttttgaagaaaaatattattttttttatcatttataattatagtaactaaatcttattca 29388966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 35137490 - 35137573
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt--ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||| ||||  |||||||||||||||||||| | ||||| |||||||    
T  35137490 aaattcatagttaaatgagttgttttttgaagaaaaatattgttttttttatcatttataattataataactaaatcttattca 35137573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 36099334 - 36099394
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||| ||||||| || ||| || |||||||| ||||||||||||| |||||    
T  36099334 ttgaatttttatcgctcataattgataacattcattattttttatgataatatgtaaaaaa 36099394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 36790123 - 36790059
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaattta 344  Q
    |||||||||||| | |||||||  ||||  ||||||||||| |||||||| ||||||||||||||    
T  36790123 ttgaatttttattgctcataatgaagaatattgattattttttatgataaaatgttaaaaattta 36790059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 43745583 - 43745523
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  43745583 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 43745523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 44653176 - 44653312
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattt 220  Q
    ||||||| ||| |||||||||| | |||| | ||||||||||||   |  ||  ||||| || ||||||| |||| || ||| |||||||| ||||||||    
T  44653176 gcaaattctatggtacacctaatacatttgagtgtatcggtatagtcactctttaaattaatggttaaatgagttgtttttttgaagaaaaatattattt 44653275  T
Q  221 tttatcatttataattataatgattaaattttattca 257  Q
    | ||||||||||| ||||||| | ||||| |||||||    
T  44653276 tctatcatttatatttataataactaaatcttattca 44653312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 423 - 513
Target Start/End: Original strand, 44653485 - 44653577
Alignment:
Q  423 tatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    ||||||||||||||||  | |||||||||||||| | ||| |||| |||||||||||||||||  | ||| |||||||| | |||||||||||    
T  44653485 tatttatttcataaaaaataatcgttaatttataaaattatgaaaaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccc 44653577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 45538881 - 45538821
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  45538881 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 45538821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 54428550 - 54428633
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt--ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||| ||||  |||||||||||||||||||| | ||||| |||||||    
T  54428550 aaattcatagttaaatgagttgttttttgaagaaaaatatttttttttttatcatttataattataataactaaatcttattca 54428633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Original strand, 2667801 - 2667860
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||    
T  2667801 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacac 2667860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 30349100 - 30349139
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  30349100 ttttttatcatttataattataataactaaattttattca 30349139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 34825379 - 34825418
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  34825379 ttttttatcatttataattataataactaaattttattca 34825418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 40477928 - 40477987
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaa 339  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| ||||    
T  40477928 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaa 40477987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 45927537 - 45927628
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||| ||| |||||||||||||||| | ||||  ||| |||||||||| |||||   || ||||||||||| ||||||||||||||    
T  45927537 tttatttcattaaagtgatcgttaatttataaattttataaaacaagagtaccgatacactcaaaattatgagtgtaccatagaagttccct 45927628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 47745998 - 47746057
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaa 339  Q
    |||||||||||||  ||||||| |||||| ||||||||||| || |||||||||| ||||    
T  47745998 ttgaatttttatcactcataattgagaacattgattattttttacgataatatgtaaaaa 47746057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 33830847 - 33830937
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| |||||||||||| |||| |||| ||||||||| ||||||   || || |||||||| |||||||||||||    
T  33830847 tttatttcattaaagtgatcattaatttatatattttatgaaacaagagtaccagtacactcaaaattgtgagtgtaccatagaagttccc 33830937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 39987693 - 39987611
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | |||  || |||| ||||||||||| |||||||||||||||||| | ||||| |||||||    
T  39987693 aaattcatagttaaatgagttattttttaaaaaaaaatattatttttttatcatttataattataataactaaatcttattca 39987611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 416 - 516
Target Start/End: Original strand, 44522298 - 44522400
Alignment:
Q  416 aaataattatttatttcat-aaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac-atagaagttccc 513  Q
    ||||| ||||||||||||| |||| |||||||||| ||||| | ||| |||  ||||||| |||||||||  | ||| ||||||||| |||||| |||||    
T  44522298 aaatagttatttatttcataaaaaatgatcgttaaattataaaattatgaagaaagagtatcggtacacctcattttgtgagtgtactatagaaattccc 44522397  T
Q  514 tta 516  Q
    |||    
T  44522398 tta 44522400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 44962921 - 44963011
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| ||||||||||||||| |  ||| ||||||||||||||||   || || |||||||| |||||||||||||    
T  44962921 tttatttcattaaagtgatctttaatttatatattttgtaaaacaagagtaccggtacacttaaaattgtgagtgtaccatagaagttccc 44963011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 50412424 - 50412342
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| || ||||||| |||| || ||| |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  50412424 aaattaatggttaaatgagttgtttttttgaagaaaaatattattttctatcatttatatttataataactaaatcttattca 50412342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 53289584 - 53289503
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatt--ttttatcatttataattataatgattaaattttatt 255  Q
    |||||||||||||||| |||| | |||  ||||||| |||||||  ||||||| |||||||||||||| | ||||| |||||    
T  53289584 aaatttatagttaaatgagttgttttttaaagaaaaatattattttttttatcttttataattataataactaaatcttatt 53289503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 876627 - 876495
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||||| |||| |||||| ||||| |||| |||||| |   ||||| |||||||||| |||| | ||| |||| |||  ||||||||    
T  876627 gcaaattatatggtacacccaaca-atttaagtgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgaaggaaaaaattatttt 876529  T
Q  222 ttatcatttataattataatgattaaattttatt 255  Q
     |||||  |||||||||||| | ||||| |||||    
T  876528 ctatcacctataattataataactaaatcttatt 876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 15670074 - 15670115
Alignment:
Q  214 attattttttatcatttataattataatgattaaattttatt 255  Q
    |||||||||||||||| ||||||||||| ||||||| |||||    
T  15670074 attattttttatcattgataattataataattaaatcttatt 15670115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 35389390 - 35389321
Alignment:
Q  416 aaataattatttatttcat-aaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||||||||||||||||| ||||  ||||||||||||||| | ||| |||  ||||||| |||||||||    
T  35389390 aaataattatttatttcataaaaaacgatcgttaatttataaaattatgaagaaagagtatcggtacacc 35389321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 37128037 - 37127980
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||| |||||||  |||||| || |||||||| ||||||||||||| |||||    
T  37128037 aatttttatcattcataaccgagaacatttattattttttatgataatatgtaaaaaa 37127980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 518
Target Start/End: Original strand, 40478072 - 40478169
Alignment:
Q  423 tatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaaa 518  Q
    |||||||| |||||||  |||||||||||||||| | ||| |||  | |||||||||||||||  | ||| |||||||| | ||||||||||||||||    
T  40478072 tatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttcccttaaa 40478169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 41982158 - 41982215
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||  ||||||| |||||| ||||||||||| || |||||||||| |||||    
T  41982158 aatttttatcactcataattgagaacattgattattttttacgataatatgtaaaaaa 41982215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 44522078 - 44522158
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | |||  ||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  44522078 aaattaatagttaaatgagttatttttt-aagaaaaatattattttctatcatttatatttataataactaaatcttattca 44522158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 477
Target Start/End: Original strand, 52038388 - 52038449
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccg 477  Q
    |||||| | ||||| |||||||||||||| ||| |||||| | ||||||| |||||||||||    
T  52038388 aaataactctttatatcataaaattgatcattactttatagaattaggaagtaagagtaccg 52038449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 482
Target Start/End: Original strand, 53376908 - 53376965
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtaca 482  Q
    |||||||||| ||| ||||| ||||||||||||||| |  || |||||||||||||||    
T  53376908 tttatttcattaaagtgatctttaatttatatattttgtgaacaagagtaccggtaca 53376965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 7e-45; HSPs: 114)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 133 - 345
Target Start/End: Complemental strand, 42881423 - 42881210
Alignment:
Q  133 cgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttat 232  Q
    |||||||| ||||||||| | |||| ||||| ||||||    ||||||||||||||||| |||| | ||| |||||||| ||||||||||||||||||||    
T  42881423 cgtacacccaacatatttgagtgtaccggtacaccaaagtctaaaatttatagttaaatgagttattttttgaagaaaaatattattttttatcatttat 42881324  T
Q  233 aattataatgattaaattttattcacnnnnnnntt-aaccaaataaaattgaatttttatcgttcataatagagaactttgattattttatatgataata 331  Q
    ||||||||||||||| | | ||||||        | ||  ||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  42881323 aattataatgattaattgtaattcaccaaaaacgtcaatgaaataaaattgaatttttatctttcataatagagaactttgattattgtatacgataata 42881224  T
Q  332 tgttaaaaatttac 345  Q
    ||||||||||||||    
T  42881223 tgttaaaaatttac 42881210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 122 - 344
Target Start/End: Complemental strand, 43959389 - 43959165
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattt 220  Q
    ||||||| || |||||||| ||||||| | | |||| || || | ||||| | |||||||| |||||||| |||| || ||| |||||||| ||||||||    
T  43959389 gcaaattctaccgtacacccaacatatctgagtgtaccgatacatcaaactttaaaatttacagttaaatgagttgtttttttgaagaaaaatattattt 43959290  T
Q  221 ttt-atcatttataattataatgattaaattttattcacnnnnnnnttaaccaaataaaattgaatttttatcgttcataatagagaactttgattattt 319  Q
    ||| ||||||||| |||||||||||||||| |||||  |       | ||| ||||||||||||||||||  ||   |||||||||||||||||||||||    
T  43959289 ttttatcatttatgattataatgattaaatcttattagcaaaaacgtcaacgaaataaaattgaattttttccgcatataatagagaactttgattattt 43959190  T
Q  320 tatatgataatatgttaaaaattta 344  Q
    |||| ||||||||||||||| ||||    
T  43959189 tatacgataatatgttaaaatttta 43959165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 43959097 - 43959007
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||||    
T  43959097 ccgacaaatgactatttatttcataaaattgatcgttaatttatagatttaggaagtaagagtaccggtacaccataatttacaagtgtac 43959007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 50187505 - 50187641
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattt 220  Q
    ||||||||||  ||||||| ||||||||| | |||| ||||| ||||| |||  || ||||||| |||||||||  || ||| |||||||| ||||||||    
T  50187505 gcaaattttacggtacacccaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaataagtcgtttttttgaagaaaaatattattt 50187604  T
Q  221 tttatcatttataattataatgattaaattttattca 257  Q
    ||||||||||||||||||||||||||||| |||||||    
T  50187605 tttatcatttataattataatgattaaatcttattca 50187641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 411 - 513
Target Start/End: Complemental strand, 42881143 - 42881040
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||| ||||| ||| ||| ||||||||||||||| ||||||  |||||| |||||||||    
T  42881143 ccgataaataactatttatttcataaaattgattgttaatttatagatttaagaagtaaaagtaccggtacaccacaatttacaagtgtaccatagaagt 42881044  T
Q  510 tccc 513  Q
    ||||    
T  42881043 tccc 42881040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 411 - 513
Target Start/End: Original strand, 46663629 - 46663732
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| ||||| |||  |||||||||||||||||  |||||| ||||||| | |||||||    
T  46663629 ccgacaaataactatttatttcataaaattgatcattaatttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagt 46663728  T
Q  510 tccc 513  Q
    ||||    
T  46663729 tccc 46663732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 411 - 519
Target Start/End: Original strand, 50189316 - 50189425
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac-atagaagt 509  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||| |||  |||||||| ||||||||  |||||| ||||||||  |||||||    
T  50189316 ccgacaaatatttatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtactggtacacctcaatttacgagtgtactgtagaagt 50189415  T
Q  510 tcccttaaaa 519  Q
    ||||| ||||    
T  50189416 tccctaaaaa 50189425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 27736976 - 27736852
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaat-aagttttgtttcgaagaaaactattattttttatcatttat 232  Q
    ||||||| ||||||||| | |||| ||||| ||||| |||  || ||||||  ||||| || |||| ||| |||||||| ||||||||||||||||||||    
T  27736976 gtacacccaacatatttgagtgtaccggtacaccaacccttcaattttataagtaaatgaattttttttttgaagaaaaatattattttttatcatttat 27736877  T
Q  233 aattataatgattaaattttattca 257  Q
    ||||||||||||||||| |||||||    
T  27736876 aattataatgattaaatcttattca 27736852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 411 - 514
Target Start/End: Complemental strand, 30060633 - 30060529
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  ||||||| |||||||||  |||||| ||||||| | |||||||    
T  30060633 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtatcggtacacctcaatttacgagtgtaccgtagaagt 30060534  T
Q  510 tccct 514  Q
    |||||    
T  30060533 tccct 30060529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 352878 - 352743
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||| | || |||||||| |||| ||||| ||| |  ||  ||||| ||||||||||||||| | ||| |||||||| |||||||||    
T  352878 gcaaattctatggtacatccaatatatttaagtgtaccggtacacctactctttaaattaatagttaaataagttcttttttgaagaaaaatattatttt 352779  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | ||||| |||||||    
T  352778 ttatcatttataattataataactaaatcttattca 352743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 408366 - 408456
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||| ||||| |||  |||||||||||||||||  |||||| ||||||||    
T  408366 ccgacaaataactatttatttaataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtac 408456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 33491704 - 33491614
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  ||||||||||||||||   |||||| ||||||||    
T  33491704 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacacttcaatttacgagtgtac 33491614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 134 - 334
Target Start/End: Complemental strand, 33491989 - 33491782
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttat 232  Q
    ||||||| || |||||| | |||| ||||| ||||| |||  || ||||||| ||||| |||| || ||| |||||||| |||||||||||||||||||     
T  33491989 gtacacccaatatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgagttgtttttttgaagaaaaatattattttttatcatttaa 33491890  T
Q  233 aattataatgattaaattttattca-cnnnnnnnttaaccaaataa-----aattgaatttttatcgttcataatagagaactttgattattttatatga 326  Q
    ||||||||||||||||  ||||||| |       | ||| ||||||       || ||||||||||| ||||||||||||||||||||||||||||| ||    
T  33491889 aattataatgattaaaccttattcatcaaaagtgtaaacaaaataattttttttttaatttttatcgctcataatagagaactttgattattttatacga 33491790  T
Q  327 taatatgt 334  Q
    ||||||||    
T  33491789 taatatgt 33491782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 423153 - 423286
Alignment:
Q  124 aaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttttt 223  Q
    ||||| ||||||||| | || |||||| | |||||||||| ||| |  ||  |||||  |||||||||||||| | ||| |||||||| |||||||||||    
T  423153 aaattctatcgtacatccaatatatttgagtgtatcggtacacccattctttaaattagtagttaaataagttgttttttgaagaaaaatattatttttt 423252  T
Q  224 atcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||| | ||||| |||||||    
T  423253 atcatttataattataataactaaatcttattca 423286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 516
Target Start/End: Complemental strand, 1433909 - 1433804
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||||| | ||||||||||||||||||| ||||||  ||| |||||||||  | || |||||||||||| ||||||||||||||| ||||||||||    
T  1433909 cgacaaataactttttatttcataaaattgattgttaatgcataaatttaggaagcaggaataccggtacaccttaatttatgagtgtaccatagaagtt 1433810  T
Q  511 ccctta 516  Q
    | ||||    
T  1433809 ctctta 1433804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 33491513 - 33491432
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  33491513 aaattaatagttaaataagttgttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 33491432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 11038284 - 11038224
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  11038284 ttgaatttttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaa 11038224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 31998783 - 31998864
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||  | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  31998783 aaattaatagttaaataagtcgttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 31998864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 411 - 476
Target Start/End: Original strand, 37748730 - 37748795
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtacc 476  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||| |||||||||    
T  37748730 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaaacaagagtacc 37748795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 417 - 513
Target Start/End: Original strand, 46549062 - 46549159
Alignment:
Q  417 aataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||| ||  ||||||| | ||||| ||||||||| ||||||| | |||||||||||    
T  46549062 aataactatttatttcataaaatttatcgttaatttatagatttagaaagcaagagtatcagtacatcataatttacgagtgtatcgtagaagttccc 46549159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 413 - 484
Target Start/End: Original strand, 32570673 - 32570743
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||    
T  32570673 gacaaatacctatttatttcataaaat-gatcgttaatttataaatttatgaagtaagagtaccggtacacc 32570743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 204 - 345
Target Start/End: Original strand, 37748515 - 37748663
Alignment:
Q  204 gaagaaaactattatttttt-atcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattg-----aatttttatcgttc 296  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |       | ||| ||||||  ||      ||||||||||| ||    
T  37748515 gaagaaaaatattatttttttatcatttataattataatgattaaatcttattcatcaaaagtgtaaacgaaataattttttttttaatttttatcgctc 37748614  T
Q  297 ataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||| ||||    
T  37748615 ataatagagaattttgattattttatacgataatatgtaaaaaaattac 37748663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 43363328 - 43363463
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||||||| |||||||||| |||||| | ||||| ||||||      ||  ||||| |||||||||| |||| | ||| |||||||| |||||||||    
T  43363328 gcaaattttatggtacacctaatatatttgagtgtattggtatattcgctctttaaattaatagttaaatgagttgttttttgaagaaaaatattatttt 43363427  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    ||||||| |||||||||||| | ||||| |||||||    
T  43363428 ttatcatctataattataataactaaatcttattca 43363463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 425 - 491
Target Start/End: Original strand, 31908759 - 31908825
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattt 491  Q
    ||||||||||||||||||| ||||||||||| ||||  ||| |||||||||||||||||| ||||||    
T  31908759 tttatttcataaaattgatagttaatttataaatttttgaagtaagagtaccggtacaccttaattt 31908825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 51944602 - 51944664
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  51944602 aatttttatcgctcataatagagaactttgattactttatacgataatatgtaaaaaaattac 51944664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 52607922 - 52607840
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||    
T  52607922 aaattaatagttaaatgagttgttttttgaagaaaaatattatttttttatcatttataattataataattaaatcttattca 52607840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 56302834 - 56302952
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattt 220  Q
    ||||||| ||| ||||||| || |||||| |||| | ||||| ||| | | |  ||||| ||||||||||||||| || ||| |||||||| ||||||||    
T  56302834 gcaaattctatggtacacccaatatatttgaatgcaccggtacacccaccatttaaattaatagttaaataagttatttttttgaagaaaaatattattt 56302933  T
Q  221 tttatcatttataattata 239  Q
    |||||||||||||||||||    
T  56302934 tttatcatttataattata 56302952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 5971051 - 5970970
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||||| || | ||| || ||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  5971051 aaattaatagttaaataaattgttttttgaggaaaaatattattttttatcatttataattataataactaaatcttattca 5970970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 34828785 - 34828858
Alignment:
Q  184 agttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| |||| | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  34828785 agttaaatgagttgttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 34828858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 50187671 - 50187728
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  50187671 aatttctatcgctcataatagagaactttgattattttatacgataatatgtaaaaaa 50187728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 408087 - 408203
Alignment:
Q  142 aacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactat-tattttttatcatttataattataa 240  Q
    ||||||||| | ||||  |||| ||||| |||  || ||||||| ||||| |||| | ||| |||||||| ||| |||||||| ||||||||||||||||    
T  408087 aacatatttgagtgtactggtacaccaaccctttaattttataggtaaatgagttattttttgaagaaaaatatatattttttttcatttataattataa 408186  T
Q  241 tgattaaattttattca 257  Q
    ||||||||| |||||||    
T  408187 tgattaaatcttattca 408203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 1434044 - 1433984
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||| | ||||||||||||||||| ||||||||||| |||||||||| |||||    
T  1434044 ttgaatttttattgctcataatagagaactttaattattttatacgataatatgtaaaaaa 1433984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 54506224 - 54506144
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattc 256  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||||||||||| ||||||||||||||| | ||||| ||||||    
T  54506224 aaattcatagttaaatgagttgttttttgaagaaaaatattattttttattatttataattataataactaaatcttattc 54506144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 408237 - 408288
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgt 334  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  408237 aatttttatcgctcataatagagagctttgattattttatacgataatatgt 408288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 411 - 466
Target Start/End: Complemental strand, 27736691 - 27736636
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaa 466  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| ||||    
T  27736691 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaaa 27736636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 36091375 - 36091442
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattta 492  Q
    |||||||||||||| |||| ||||||||||| ||||  ||| |||||||||||||||||| |||||||    
T  36091375 tttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaattta 36091442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 46548923 - 46548982
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaa 339  Q
    |||||||||||  | ||||||||||||||||||||||||||||| |||||||||| ||||    
T  46548923 ttgaatttttaaagctcataatagagaactttgattattttatacgataatatgtaaaaa 46548982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 46663346 - 46663468
Alignment:
Q  135 tacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactatta-ttttttatcatttata 233  Q
    |||||| ||||||||| | |||| ||||| ||||| |||  || ||||||| ||||| |||| | ||| |||||||| ||||| ||||||||||||||||    
T  46663346 tacacccaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgagttgttttttgaagaaaaatattatttttttatcatttata 46663445  T
Q  234 attataatgattaaattttattca 257  Q
     |||||||| |||||| |||||||    
T  46663446 gttataatg-ttaaatcttattca 46663468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 26117801 - 26117883
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||||||| |||||||||||||||||||| | ||||| |||||||    
T  26117801 aaattaatagttaaatgagttgttttttgaagaaaaatattatttttttatcatttataattataataactaaatcttattca 26117883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 27736821 - 27736764
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||| | ||||||||||| ||||||||||||||| |||||||||| |||||    
T  27736821 aatttttatcgcttataatagagaaatttgattattttatacgataatatgtaaaaaa 27736764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 50383681 - 50383600
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||| |||||||||| ||||||||||||| | ||||| |||||||    
T  50383681 aaattaatagttaaatgagttgttttttgaagaaaaatattgttttttatcacttataattataataactaaatcttattca 50383600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 414 - 483
Target Start/End: Original strand, 51282241 - 51282310
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacac 483  Q
    |||||||| | |||||||||||||| |||| ||||||||||| ||||  ||| |||||||||||||||||    
T  51282241 acaaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacac 51282310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 51944731 - 51944820
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta 500  Q
    |||| |||||| |||||||||||||||||||||| |||||||||| ||||| |||  || ||||||  ||||||  |||||| |||||||    
T  51944731 ccgataaataactatttatttcataaaattgatcattaatttataaatttatgaagcaaaagtaccaatacacctcaatttacgagtgta 51944820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 54996152 - 54996217
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    ||||| ||| |||||| |||| | ||| |||||||| |||||||||||||||||||||||||||||    
T  54996152 aaattaataattaaatgagttgttttttgaagaaaaatattattttttatcatttataattataat 54996217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 46630735 - 46630643
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||| ||||    
T  46630735 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagtttcctt 46630643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 2526488 - 2526579
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||| ||  ||||||||||||||||||||| | |||| ||||||||||||||||   || || |||||||| ||||||||||||||    
T  2526488 tttatttcattaaggtgatcgttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccct 2526579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 425 - 514
Target Start/End: Complemental strand, 10779081 - 10778990
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| ||||||||||||||    
T  10779081 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccct 10778990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 25607791 - 25607721
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||||||  |||||||||||||||||  |||||||||||||| ||||| ||| | ||||||||||||||||    
T  25607791 gacaaatacctatttatttcataaaata-atcgttaatttataaatttatgaagtgagagtaccggtacacc 25607721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 425 - 514
Target Start/End: Complemental strand, 38955132 - 38955041
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||| ||| ||||| |||||||||||| |||| |||| ||||||||||||||||   || || |||||||| ||||||||||||||    
T  38955132 tttatttcattaaagtgatctttaatttatatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccct 38955041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 216 - 255
Target Start/End: Original strand, 46548848 - 46548887
Alignment:
Q  216 tattttttatcatttataattataatgattaaattttatt 255  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  46548848 tattttttatcatttataattataatgattaaatcttatt 46548887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 257
Target Start/End: Original strand, 51944448 - 51944570
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttata 233  Q
    ||||||| ||||||||| | ||||  |||| |||||  ||  || ||||||  ||||| |||| | ||| |||||||| |||||||||||||||||||||    
T  51944448 gtacacccaacatatttgagtgtactggtacaccaattctttaattttatatgtaaatgagttgttttttgaagaaaaatattattttttatcatttata 51944547  T
Q  234 attataatgattaaattttattca 257  Q
     ||||||| ||||||| |||||||    
T  51944548 gttataat-attaaatcttattca 51944570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 582823 - 582905
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||| ||||| |||||||||||||||||||| | ||||| |||||||    
T  582823 aaattcatagttaaatgagttgttttttgaagaaaaatataatttttttatcatttataattataataactaaatcttattca 582905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 1856856 - 1856938
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| ||| |||| ||||||||| |||||||||||||||||||| | ||||| |||||||    
T  1856856 aaattcatagttaaatgagttgttttttgaaaaaaaatattatttttttatcatttataattataataactaaatcttattca 1856938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 5337917 - 5337971
Alignment:
Q  182 atagttaaataagttttgtttcgaagaaaactattattttttatcatttataatt 236  Q
    ||||||||||||||| | |||  ||||||| ||||||||||||||||||||||||    
T  5337917 atagttaaataagttgttttttaaagaaaaatattattttttatcatttataatt 5337971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 9356734 - 9356655
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||||||||||||||| ||||||  |||| ||||||| |||||||    
T  9356734 aaattaatagttaaatgagttgttttttgaagaaaaatattattttttatcatctataat--taataattaaatcttattca 9356655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 491
Target Start/End: Original strand, 9858566 - 9858632
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattt 491  Q
    |||||||||||||| | || ||||||||||| ||||  ||| |||||||||||||||||| ||||||    
T  9858566 tttatttcataaaaataatagttaatttataaatttttgaagtaagagtaccggtacaccttaattt 9858632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 411 - 497
Target Start/End: Complemental strand, 11038149 - 11038063
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagt 497  Q
    |||| |||||| | ||||||||||||||||||| ||||||  ||| ||||| |||  | ||||| ||||||||| ||||||||||||    
T  11038149 ccgataaataactttttatttcataaaattgattgttaatgcataaatttaagaagcaggagtatcggtacaccttaatttatgagt 11038063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 513
Target Start/End: Complemental strand, 16004623 - 16004533
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||||| ||| |||||||||||| |||  |||||||||||||||||||||   || || |||||||| |||||||||||||    
T  16004623 tttatttcattaaatttatctttaatttatatattttttgaaataagagtaccggtacactcaaaattgtgagtgtaccatagaagttccc 16004533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 517
Target Start/End: Complemental strand, 23639326 - 23639232
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaa 517  Q
    |||||||||| ||| ||||||||||||||||||||| |  ||| || |||||||||||||   || ||||||||||| ||||||| |||||||||    
T  23639326 tttatttcattaaagtgatcgttaatttatatattttgtaaaacaatagtaccggtacacttaaaattatgagtgtaccatagaaattcccttaa 23639232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 24980293 - 24980211
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||  |||| | ||| |||||||| ||||||||||| |||||||||||||||||  ||||||| |||||||    
T  24980293 aaattaatagttaaaagagttgttttttgaagaaaaatattatttttttatcatttataattataacaattaaatcttattca 24980211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 32845994 - 32845940
Alignment:
Q  187 taaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    ||||| |||| | ||| |||||||| |||||||||||||||||||||||||||||    
T  32845994 taaatgagttgttttttgaagaaaaatattattttttatcatttataattataat 32845940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 34595188 - 34595146
Alignment:
Q  298 taatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||||||||||||||| |||||||||| |||||    
T  34595188 taatagagaactttgattattttatacgataatatgtaaaaaa 34595146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 34595441 - 34595351
Alignment:
Q  159 cggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattt-tttatcatttataattataatgattaaa 248  Q
    |||||||| |||||   |||||||||||||||| |||| | |||  ||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  34595441 cggtatactaaacccttaaatttatagttaaatgagttattttttaaagaaaaatattatttgtttatcaattataattacaatgattaaa 34595351  T

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Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 513
Target Start/End: Complemental strand, 42244627 - 42244537
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||||||||||||||||||| |  ||| ||||||||||||||||   || || |||||||| |||||||||||||    
T  42244627 tttatttcattaaagtgatcgttaatttatatattttgtaaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccc 42244537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 44998727 - 44998817
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||    
T  44998727 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccc 44998817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 46663500 - 46663562
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||| ||| ||||||||||||||||||||||  ||||| |||||||||| ||||| ||||    
T  46663500 aatttttgtcgctcataatagagaactttgattacgttatacgataatatgtaaaaaaattac 46663562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 50498569 - 50498503
Alignment:
Q  276 aaaattgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatt 342  Q
    |||||||||||||||||  ||||||| |||||| || |||||||| || |||||||||| |||||||    
T  50498569 aaaattgaatttttatcactcataattgagaacattcattattttttacgataatatgtaaaaaatt 50498503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 513
Target Start/End: Original strand, 50776076 - 50776178
Alignment:
Q  413 gacaaataattatttatttcat-aaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||||||||||||||||| |||| |||| ||||||||||| | ||| |||| || ||||||| ||||||  | ||||| |||||| | ||||||||    
T  50776076 gacaaataattatttatttcataaaaaatgattgttaatttataaaattatgaaaaaatagtaccgatacacctcattttataagtgtaccgtagaagtt 50776175  T
Q  511 ccc 513  Q
    |||    
T  50776176 ccc 50776178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 241
Target Start/End: Complemental strand, 53936918 - 53936797
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||||| || |||||| | |||| ||||| ||| |  ||  ||||| |||||||||| |||| | ||| |||||||| |||||||||    
T  53936918 gcaaattctatggtacacccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgagttgttttttgaagaaaaatattatttt 53936819  T
Q  222 tt--atcatttataattataat 241  Q
    ||  ||||||||||||||||||    
T  53936818 ttttatcatttataattataat 53936797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 352709 - 352644
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| ||||| ||||    
T  352709 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaaattac 352644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 512
Target Start/End: Original strand, 21515306 - 21515395
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttcc 512  Q
    |||||||||| ||| ||||| |||||||||||| |||| |||| ||||||||||||||||   || || |||||||| ||||||||||||    
T  21515306 tttatttcattaaagtgatctttaatttatatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtatcatagaagttcc 21515395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 28967642 - 28967675
Alignment:
Q  215 ttattttttatcatttataattataatgattaaa 248  Q
    ||||||||||||||||||||||||||||||||||    
T  28967642 ttattttttatcatttataattataatgattaaa 28967675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 30348488 - 30348435
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| ||||||||| ||||||||||| ||||||| ||||||| |||||||    
T  30348488 gaagaaaaatattattttctatcatttatatttataataattaaatcttattca 30348435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 34595071 - 34595022
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag 462  Q
    ||||||||| ||||||||||||||||||||| |||||| |||| ||||||    
T  34595071 gacaaataactatttatttcataaaattgattgttaatgtataaatttag 34595022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 455
Target Start/End: Complemental strand, 42080428 - 42080387
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttata 455  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  42080428 acaaataattttttatttcataaaaatgatcgttaatttata 42080387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 42177692 - 42177611
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| || ||||||| |||| | ||| |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  42177692 aaattaatggttaaatgagttgttttttgaagaaaaatattattttctatcatttatatttataataactaaatattattca 42177611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 50498677 - 50498596
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| ||| |||| || | |||||||||||||||||||||||| | ||||| |||||||    
T  50498677 aaattgatagttaaatgagttgttttttgaataaaaataattttttttatcatttataattataataactaaatcttattca 50498596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 5970936 - 5970876
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  5970936 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 5970876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 511
Target Start/End: Original strand, 24292295 - 24292383
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttc 511  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||    
T  24292295 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacacttaaaattgtgagtgtaccatagaagttc 24292383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 31998898 - 31998958
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  31998898 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 31998958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 32845890 - 32845830
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||| ||||||| |||||| || |||||||| || |||||||||| |||||    
T  32845890 ttgaatttttatcgctcataattgagaacattcattattttttacgataatatgtaaaaaa 32845830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 33491398 - 33491338
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  33491398 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 33491338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 36631386 - 36631306
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattc 256  Q
    ||||| || ||||||| |||| | ||| |||||||| ||||||||| ||||||||||| ||||||| | ||||| ||||||    
T  36631386 aaattaatggttaaatgagttgttttttgaagaaaaatattattttctatcatttatatttataataactaaatcttattc 36631306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 48549754 - 48549662
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac-atagaagttccctt 515  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| ||||||| ||||||||   || || ||||||||| |||||| |||||||    
T  48549754 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtatcggtacactcaaaattgtgagtgtactatagaaattccctt 48549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 50775829 - 50775909
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattc 256  Q
    ||||| || ||||||| |||| | ||| |||||||| ||||||||| ||||||||||| ||||||| | ||||| ||||||    
T  50775829 aaattaatggttaaatgagttgttttttgaagaaaaatattattttctatcatttatatttataataactaaatcttattc 50775909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 126672 - 126711
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  126672 ttttttatcatttataattataataactaaattttattca 126711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 24980178 - 24980119
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaa 339  Q
    |||||||||||||  ||||||| |||||| ||||||||||| || |||||||||| ||||    
T  24980178 ttgaatttttatcactcataattgagaacattgattattttttacgataatatgtaaaaa 24980119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 323
Target Start/End: Original strand, 28967718 - 28967761
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttata 323  Q
    |||||||||||||  |||||||| ||||||||||||||||||||    
T  28967718 ttgaatttttatcactcataatatagaactttgattattttata 28967761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 29582135 - 29582194
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaa 339  Q
    |||||||||||||  ||||||| |||||| ||||||||||| || |||||||||| ||||    
T  29582135 ttgaatttttatcactcataattgagaacattgattattttttacgataatatgtaaaaa 29582194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 484
Target Start/End: Complemental strand, 30348256 - 30348193
Alignment:
Q  422 ttatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    |||||||||||||||||  |||||||||||||||| | ||| |||  |||||||||||||||||    
T  30348256 ttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacacc 30348193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 483
Target Start/End: Original strand, 33612828 - 33612899
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||| || |||||||||| ||| |||||||||||||||| |||| | | || ||||||||||||||||    
T  33612828 gacaaatacttttttatttcattaaagtgatcgttaatttataaattttgtgcaacaagagtaccggtacac 33612899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 513
Target Start/End: Complemental strand, 42177441 - 42177342
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    ||||| |||||||||||||||||  |||||||||||||||| | ||| |||  |||||||||| ||||||  | ||| |||||||| | |||||||||||    
T  42177441 aaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccgatacacctcattttgtgagtgtaccgtagaagttccc 42177342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 42680688 - 42680629
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||||||| |||||||||||||||| |||| |  ||| ||||||||||||||||    
T  42680688 tttatttcataaaagtgatcgttaatttataaattttgtaaaacaagagtaccggtacac 42680629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 455
Target Start/End: Original strand, 43363636 - 43363675
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttata 455  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  43363636 aaataactatttatttcataaaaatgatcgttaatttata 43363675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 50607685 - 50607820
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattt 220  Q
    ||||||||||| ||||||| || |||||| | |||| ||||| ||  |  ||  ||||| || ||||||| |||| || ||| |||||||| ||||||||    
T  50607685 gcaaattttatggtacacccaatatatttgagtgtaccggtacacgcactctttaaattaatggttaaatgagttgtttttttgaagaaaaatattattt 50607784  T
Q  221 tttatcatttataattataatgattaaattttattc 256  Q
    | ||||||||||| ||||||| | ||||| ||||||    
T  50607785 tctatcatttatatttataataactaaatcttattc 50607820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 518
Target Start/End: Original strand, 54499891 - 54499986
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac-atagaagttcccttaaa 518  Q
    ||||| |||| ||| |||||||||||||||| |||| | |||| ||||||||||||||||   || |||||| ||||| |||||||||||| ||||    
T  54499891 tttatctcattaaagtgatcgttaatttataaattttgtgaaacaagagtaccggtacactcaaaattatgaatgtacgatagaagttcccataaa 54499986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 1434118 - 1434088
Alignment:
Q  218 ttttttatcatttataattataatgattaaa 248  Q
    |||||||||||||||||||||||||||||||    
T  1434118 ttttttatcatttataattataatgattaaa 1434088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 416 - 482
Target Start/End: Original strand, 21424450 - 21424515
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtaca 482  Q
    |||||| | |||||||||||||||  |||||||||||||  ||||| ||| ||||||||||||||||    
T  21424450 aaataactttttatttcataaaata-atcgttaatttatcaatttatgaagtaagagtaccggtaca 21424515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 32737512 - 32737462
Alignment:
Q  205 aagaaaactattattttttatcatttataattataatgattaaattttatt 255  Q
    ||||||| |||||  || ||||||||||||||||||| |||||||||||||    
T  32737512 aagaaaaatattacattctatcatttataattataataattaaattttatt 32737462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 36569965 - 36570055
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| |||||||| |||||||   || || |||||||| |||||||||||||    
T  36569965 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtactggtacactcaaaattgtgagtgtaccatagaagttccc 36570055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 45692970 - 45692893
Alignment:
Q  182 atagttaaataagttttgtttcgaagaaaactattatttttt--atcatttataattataatgattaaattttattca 257  Q
    |||||||||| |||| | ||| |||||||| |||| ||||||  |||||||||||||||||| | ||||| |||||||    
T  45692970 atagttaaatgagttgttttttgaagaaaaatattgttttttttatcatttataattataataactaaatcttattca 45692893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 52257449 - 52257539
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| |||||||||||||||||| |||| |||| |||||||||  |||||   || |||||| |||| |||||||||||||    
T  52257449 tttatttcattaaaatgatcgttaatttatatattttatgaaacaagagtaccaatacactcaaaattatgaatgtaccatagaagttccc 52257539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 501
Target Start/End: Complemental strand, 352572 - 352487
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||| |||||||||  |||||| |||||||||||||||| | ||| |||| | ||||| |||||||||  | ||| |||||||||    
T  352572 aaatagttatttattatataaaaatgatcgttaatttataaaattatgaaacaggagtatcggtacacctcactttgtgagtgtac 352487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 3763198 - 3763251
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  3763198 gaagaaaaatattattttctatcatttatatttataataactaaatcttattca 3763251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 27636057 - 27636134
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| || ||||| |||||||||| |||| | | || |||||||||||||||| | ||| |||||||||||    
T  27636057 tttatttcatataaatgatcattaatttataaattttgtggaacaagagtaccggtacactaaaatatatgagtgtac 27636134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 27761636 - 27761571
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||  ||||||| |||| | || |||||||| ||||||||||||| ||||| ||||    
T  27761636 ttgaatttttatcactcataattgagagcattcattattttttatgataatatgtaaaaaaattac 27761571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 27950568 - 27950527
Alignment:
Q  214 attattttttatcatttataattataatgattaaattttatt 255  Q
    |||||||||||||||| ||||||||||| ||||||| |||||    
T  27950568 attattttttatcattaataattataataattaaatcttatt 27950527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 255
Target Start/End: Original strand, 29646656 - 29646757
Alignment:
Q  154 tgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaatttta 253  Q
    ||||| |||| |||||| | | ||||| ||||||||||| ||| | ||| ||||||||   ||||||| |||||  |||||||||||| ||||||| |||    
T  29646656 tgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagaaaaaagttattttctatcacctataattataataattaaatctta 29646755  T
Q  254 tt 255  Q
    ||    
T  29646756 tt 29646757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 492
Target Start/End: Complemental strand, 34936646 - 34936577
Alignment:
Q  423 tatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattta 492  Q
    ||||| || ||||||| |||||||||| ||||  ||||| |||| | ||||||||||||||| |||||||    
T  34936646 tattttttacataaaaatgatcgttaacttattgatttatgaaacaggagtaccggtacaccttaattta 34936577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 513
Target Start/End: Complemental strand, 36631136 - 36631036
Alignment:
Q  414 acaaataattatttatttcat-aaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttc 511  Q
    ||||||| ||||||||||||| |||| |||||||||||||||| | ||| |||| || ||||||| ||||||  | ||| |||||||| | |||||||||    
T  36631136 acaaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaaa-aatagtaccgttacacctcattttgtgagtgtaccgtagaagttc 36631038  T
Q  512 cc 513  Q
    ||    
T  36631037 cc 36631036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 36631271 - 36631206
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||| |  ||||||| || |||||||||||| || || |||||||||||||||| ||||    
T  36631271 ttgaatttttagcagtcataattgataactttgattatattttacgataatatgttaaaaaattac 36631206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 38008237 - 38008290
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  38008237 gaagaaaaatattattttctatcatttatatttataataactaaatcttattca 38008290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 48066379 - 48066278
Alignment:
Q  154 tgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaatttta 253  Q
    ||||| ||||||||||| |   ||||| |||||| ||||| || | ||| | ||||||  |||||||| |||||  |||||||||||||||||||| |||    
T  48066379 tgtattggtataccaaatcattaaattaatagttcaataaattattttttgtagaaaaaaattattttctatcacctataattataatgattaaatctta 48066280  T
Q  254 tt 255  Q
    ||    
T  48066279 tt 48066278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 501
Target Start/End: Complemental strand, 48647121 - 48647032
Alignment:
Q  413 gacaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||| |||||||||||| ||||  |||||||||||||||| | ||| |||| || ||||||  ||||||  | |||||||||||||    
T  48647121 gacaaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaaacaaaagtaccaatacacctcattttatgagtgtac 48647032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 2e-39; HSPs: 85)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 122 - 345
Target Start/End: Complemental strand, 13645914 - 13645690
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| || |||||||  ||||||||| | |||| ||||| | ||||||| ||||||||||||||||| |||| | ||| |||||||| |||||||||    
T  13645914 gcaaattctaccgtacactcaacatatttgagtgtaccggtacatcaaaccttaaaatttatagttaaatgagttgttttttgaagaaaaatattatttt 13645815  T
Q  222 ttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattgaatttttatcgttcataatagagaactttgattatttt 320  Q
    ||||||||||| |||||||||||||||| ||||||| |       | | | |||||||||||||||||| |||   ||||||||||||||||| ||||||    
T  13645814 ttatcatttatgattataatgattaaatcttattcagcaaaaacgtcagcgaaataaaattgaatttttttcgcatataatagagaactttgactatttt 13645715  T
Q  321 atatgataatatgttaaaaatttac 345  Q
     || ||||||||||||||| |||||    
T  13645714 gtacgataatatgttaaaattttac 13645690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 122 - 340
Target Start/End: Original strand, 32455303 - 32455525
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    |||||||||| || ||||| ||||||||| | |||| ||||| | |||||    || ||||||||||||| |||| | ||| |||||||| |||||||||    
T  32455303 gcaaattttaccgcacacccaacatatttgagtgtaccggtacatcaaactcttaagtttatagttaaatgagttattttttgaagaaaaatattatttt 32455402  T
Q  222 ttatcatttataattataatgattaaatt---ttattca-cnnnnnnnttaaccaaataaaattgaatttttatcgttcataatagagaactttgattat 317  Q
    |||||||||||||||||||||||||||||   ||||||| |       | ||| || |||||||||| |||||||| |||||||||||||||||||||||    
T  32455403 ttatcatttataattataatgattaaattatcttattcaccaaaagcatcaacaaattaaaattgaaattttatcgctcataatagagaactttgattat 32455502  T
Q  318 tttatatgataatatgttaaaaa 340  Q
    |||||| |||||||||| |||||    
T  32455503 tttatacgataatatgtaaaaaa 32455525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 134 - 345
Target Start/End: Complemental strand, 10568864 - 10568650
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagtt-aaataagttttgtttcgaagaaaactattattttttatcatttat 232  Q
    ||||||| ||||||||| | || | ||||| |||||||||  |||||||||||| |||| |||| | ||| |||||||| ||||||||||||||||||||    
T  10568864 gtacacccaacatatttgagtgcaccggtacaccaaacctttaaatttatagtttaaatgagttgttttttgaagaaaaatattattttttatcatttat 10568765  T
Q  233 aattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattgaatttttat-cgttcataatagagaactttgattattttatatgataat 330  Q
    ||||||||||||||||| ||||||| |       | ||  |||||||||||||||||| |   ||  |||||||||||||||||||||||||||||||||    
T  10568764 aattataatgattaaatcttattcaccaaaagcgtcaatgaaataaaattgaatttttttgaatttttaatagagaactttgattattttatatgataat 10568665  T
Q  331 atgttaaaaatttac 345  Q
    |||  ||||||||||    
T  10568664 atggcaaaaatttac 10568650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 208 - 345
Target Start/End: Complemental strand, 40585171 - 40585033
Alignment:
Q  208 aaaactattattttttatcatttataattataatgattaaattttattcacnnnnnnntt-aaccaaataaaattgaatttttatcgttcataatagaga 306  Q
    |||| ||||||||||||| || |||||||||||||||||||| ||||||||        | ||  ||||||||||||||||||||||||||||||||| |    
T  40585171 aaaaatattattttttataatgtataattataatgattaaatgttattcactaaaagcgtcaatgaaataaaattgaatttttatcgttcataatagaca 40585072  T
Q  307 actttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  40585071 actttgattattttatacgataatattttaaaaatttac 40585033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 411 - 500
Target Start/End: Complemental strand, 13645623 - 13645534
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta 500  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||| |||||| |||||||    
T  13645623 ccgacaaataactatttatttcataaaattgatcgttaatttatagatttaggaagtaagagtaacggtacaccacaatttacgagtgta 13645534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 218 - 339
Target Start/End: Complemental strand, 43059783 - 43059661
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttattcacnnnnnnntt-aaccaaataaaattgaatttttatcgttcataatagagaactttgatta 316  Q
    ||||||||||||||||||||||||||| |||| ||||||||        | ||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  43059783 ttttttatcatttataattataatgatcaaatcttattcaccataaacatcaattaaataaaattgaatttttatcgctcataatagagaactttgatta 43059684  T
Q  317 ttttatatgataatatgttaaaa 339  Q
    |||||||| ||||||||||||||    
T  43059683 ttttatatcataatatgttaaaa 43059661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 136 - 345
Target Start/End: Original strand, 36155865 - 36156077
Alignment:
Q  136 acacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataat 235  Q
    ||||| ||||||||| | |||||||||  | ||| |||  || ||||||| ||||| |||| | ||| |||||||| |||||||||||||||||||||||    
T  36155865 acacccaacatatttgagtgtatcggtgcatcaacccttcaattttataggtaaatgagttgttttttgaagaaaaatattattttttatcatttataat 36155964  T
Q  236 tataatgattaaattttattca-cnnnnnnnttaaccaaataa--aattgaatttttatcgttcataatagagaactttgattattttatatgataatat 332  Q
    |||||||||||||| ||||||| |       | ||| ||||||    || ||||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  36155965 tataatgattaaatcttattcatcaaaagtgtaaacgaaataatttttttaatttttatcgctcataatagagaactttgattattttatacgatgatat 36156064  T
Q  333 gttaaaaatttac 345  Q
    || ||||| ||||    
T  36156065 gtaaaaaaattac 36156077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 179 - 345
Target Start/End: Original strand, 17069051 - 17069221
Alignment:
Q  179 tttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataa 277  Q
    ||||||| ||||| |||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |       | ||| ||||||    
T  17069051 tttatagataaatgagttgttttttgaagaaaaatattattttttatcatttataattataatgattaaatcttattcatcaaaagtgtaaacgaaataa 17069150  T
Q  278 ---aattgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
         || ||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||| ||||    
T  17069151 tttttttaaatttttatcgctcataataaagaactttgattattttatacgataatatgtaaaaaaattac 17069221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 176 - 345
Target Start/End: Complemental strand, 39041647 - 39041476
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattcacnnnnnnntt-aaccaa 273  Q
    |||||||||||||||| ||||   ||| |||||||| ||||||||||| |||||||||||||||||| || || | ||||||||        | ||| ||    
T  39041647 aaatttatagttaaatgagttgatttttgaagaaaaatattatttttttatcatttataattataattataaactattattcaccaaaagcgtcaacgaa 39041548  T
Q  274 ataaaattgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||| ||||| | |||||| |||||||||||||||||||| |||||||||| ||||| ||||    
T  39041547 ataaaattgaatttctatcgcttataataaagaactttgattattttatacgataatatgtaaaaaaattac 39041476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 40584966 - 40584876
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||| |||||| ||||||||||| |||||||| |||||||| ||||||||    
T  40584966 ccgacaaataactatttatctcataaaattgatcgtcaatttataaatttagaaaataagagtatcggtacactataatttacgagtgtac 40584876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 2270887 - 2270814
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  |||||||||||||||||    
T  2270887 ccgacaaataattatttatttcataaaattgatcgttaatttatagatttatgaagcaagagtaccggtacacc 2270814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 38355110 - 38354996
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttata 233  Q
    ||||||||||||||||| | ||||  |||| |||||||    |||||||||||||||| |||| | ||| ||| |||| |||||||||||||||||||||    
T  38355110 gtacacctaacatatttgagtgtactggtacaccaaactcttaaatttatagttaaatgagttattttttgaacaaaaatattattttttatcatttata 38355011  T
Q  234 attataatgattaaa 248  Q
    |||||||||||||||    
T  38355010 attataatgattaaa 38354996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 13118802 - 13118937
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||| |||| |||||||| |||| ||||| ||  |  ||  ||||| ||||||||||||||| | ||| |||||||| |||||||||    
T  13118802 gcaaattctatggtacatctaatatatttaagtgtaccggtacactcactctttaaattaatagttaaataagttattttttgaagaaaaatattatttt 13118901  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | ||||| |||||||    
T  13118902 ttatcatttataattataataactaaatcttattca 13118937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 117 - 334
Target Start/End: Complemental strand, 24432202 - 24431981
Alignment:
Q  117 taaaagcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactatt 216  Q
    |||| ||||||| ||  ||||||| ||||||||| | ||||||| || ||||| | |  || |||| || ||||| |||| | ||| |||||||| | ||    
T  24432202 taaaggcaaattctacggtacacccaacatatttgagtgtatcgatacaccaatcttttaattttaaaggtaaatgagttgttttttgaagaaaaatgtt 24432103  T
Q  217 attttttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaaatt---gaatttttatcgttcataatagagaactttg 312  Q
    ||||||||||||||||||||||||||||||||| ||||||| |       | ||  ||||||  ||    ||||||||||| |||||||||||||| |||    
T  24432102 attttttatcatttataattataatgattaaatcttattcatcaaaagtgtaaatgaaataattttttaaaatttttatcgctcataatagagaacattg 24432003  T
Q  313 attattttatatgataatatgt 334  Q
    ||||||||||| ||||||||||    
T  24432002 attattttatacgataatatgt 24431981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 411 - 515
Target Start/End: Original strand, 32455599 - 32455702
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| |||||||||||||||||||||  ||||| |||| |||||||||    |||||||| |||||| ||||||||||||||| |||||||||    
T  32455599 ccgacaaataactatttatttcataaaattgattattaatgtataaatttaggaa--gcgagtaccgatacaccttaatttatgagtgtaccatagaagt 32455696  T
Q  510 tccctt 515  Q
    ||||||    
T  32455697 tccctt 32455702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 36156144 - 36156234
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| |||||  ||  |||||||||||||||||  |||||| ||||||||    
T  36156144 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttataaagcaagagtaccggtacacctcaatttacgagtgtac 36156234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 42486957 - 42486876
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| ||||||||| ||||||||||||||||||| | |||||||||||||    
T  42486957 aaattaatagttaaataagttattttttgaagaaaaatattattttatatcatttataattataataactaaattttattca 42486876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 411 - 498
Target Start/End: Original strand, 17069288 - 17069375
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtg 498  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  | |||||||||||||||  |||||| |||||    
T  17069288 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaggagtaccggtacacctcaatttacgagtg 17069375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 204 - 345
Target Start/End: Complemental strand, 2271099 - 2270954
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaata---aaattgaatttttatcgttcata 299  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||| |||| || |       | ||| |||||      || ||||||||||| |||||    
T  2271099 gaagaaaaatattattttttataatttataattataatgattaaatcttatccatcaaaattgtaaacgaaatatttttttttaatttttatcgctcata 2271000  T
Q  300 atagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||||||||||||| |||||||||| ||||| ||||    
T  2270999 atagagaactttgattattttatacgataatatgtaaaaaaattac 2270954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 38354950 - 38354890
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||    
T  38354950 ttgaatttttatcgctcgtaatagagaactttgattattttatacgataatatgtaaaaaa 38354890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 411 - 482
Target Start/End: Complemental strand, 1445829 - 1445758
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtaca 482  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| ||| ||||| ||||| ||||    
T  1445829 ccgacaaataactatttatttcataaaattgatcgttagtttataaatttatgaagtaagaataccgataca 1445758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 37963096 - 37962997
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| | ||||||| |||||| |||||||||||||||| |||| | |||| |||||||||||||||| | ||||| |||||||| ||||||||||    
T  37963096 gacaaataaatttttattttataaaaatgatcgttaatttataaattttgtgaaacaagagtaccggtacactacaatttctgagtgtaccatagaagtt 37962997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 1446112 - 1445988
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttttt--atcattta 231  Q
    ||||||| ||||||||| | ||||||| || |||||||||  || ||||||| ||||| |||| | ||  |||||||| |||||||||||  || |||||    
T  1446112 gtacacccaacatatttgagtgtatcgatacaccaaacctttaattttataggtaaatgagttgttttatgaagaaaaatattatttttttcat-attta 1446014  T
Q  232 taattataatgattaaattttattca 257  Q
    |||||||||||||||||| |||||||    
T  1446013 taattataatgattaaatcttattca 1445988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 10401024 - 10400962
Alignment:
Q  195 ttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||| ||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  10401024 tttttttttgaagaaaaatattattttttatcatttataattataatgattaaaacttattca 10400962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 13091230 - 13091320
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||||||| |||| ||||||||||| ||||  ||| |||||||||||||||||| ||||||| | ||||| | ||||||||||||    
T  13091230 tttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttacgggtgtaccgtagaagttccct 13091320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 10400804 - 10400731
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  |||||||| | ||||||    
T  10400804 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtactgatacacc 10400731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 10400930 - 10400873
Alignment:
Q  285 tttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatt 342  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||||||| |||||||    
T  10400930 tttttatcgctcataatagataactttgattattttatacgataatatgtaaaaaatt 10400873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 501
Target Start/End: Complemental strand, 24431902 - 24431813
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  |||| || || ||||||  |||||| ||||||||    
T  24431902 cgacaaataactatttatttcataaaattgatcgttagtttataaatttatgaagcaagaatatcgatacacctcaatttacgagtgtac 24431813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 25684380 - 25684472
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || ||||||||||| |||||||||||||||    
T  25684380 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattatgagtgtaccatagaagttccctt 25684472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 23258759 - 23258708
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgt 334  Q
    ||||||||||| |||||||||||||||||||||||||| || ||||||||||    
T  23258759 aatttttatcgctcataatagagaactttgattattttttacgataatatgt 23258708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 30753803 - 30753720
Alignment:
Q  176 aaatttatagttaaataagttttg-tttcgaagaaaactatta-ttttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| ||||||  ||| |||||||| ||||| |||||||||||||||||||||||| | |||||||||||||    
T  30753803 aaattaatagttaaatgagtttttcttttgaagaaaaatattaattttttatcatttataattataataactaaattttattca 30753720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 4618117 - 4617985
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||||||| |||||||||| | |||| | ||||| |||| |||||| | | ||||| ||||||||||| ||| | ||| ||||| ||  ||||||||    
T  4618117 gcaaattttatggtacacctaaaa-atttgagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagagaaaaattatttt 4618019  T
Q  222 ttatcatttataattataatgattaaattttatt 255  Q
     |||||  |||||||||||| ||||||| |||||    
T  4618018 ctatcacctataattataataattaaatcttatt 4617985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 5359785 - 5359862
Alignment:
Q  180 ttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||  |||| | ||| |||||||| |||| |||||||||||||||||||||||| | ||||| |||||||    
T  5359785 ttatagttaaaagagttgttttttgaagaaaaatatttttttttatcatttataattataataactaaatcttattca 5359862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 34259594 - 34259667
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaat 249  Q
    ||||| ||||||||||||||| | ||| ||  |||| |||||||||||||||||||||| |||||| |||||||    
T  34259594 aaattaatagttaaataagttgttttttgagaaaaaatattattttttatcatttataactataataattaaat 34259667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 411 - 460
Target Start/End: Complemental strand, 39041409 - 39041360
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatattt 460  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  39041409 ccgacaaataactatttatttcataaaattgatcattaatttataaattt 39041360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 413 - 501
Target Start/End: Complemental strand, 40563217 - 40563128
Alignment:
Q  413 gacaaataattatttatttcata-aaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||||||||||||| | ||| |||||||||||||||| | ||| |||  ||||||| |||||||||  | |||||||||||||    
T  40563217 gacaaataattatttatttcacacaaaatgatcgttaatttataaaattatgaagcaagagtatcggtacacctcattttatgagtgtac 40563128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 41802424 - 41802493
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatg 494  Q
    |||||||||||||| |||| ||||||||||| ||||   ||||||||||||| ||||||| |||||||||    
T  41802424 tttatttcataaaaatgatagttaatttataaatttttaaaataagagtaccagtacaccttaatttatg 41802493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 13126981 - 13127116
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||| |||| |||||||| |||| ||||||||  |  ||  ||||| || ||||||| ||||   ||| |||||||| |||||||||    
T  13126981 gcaaattctatggtacatctaatatatttaagtgtaccggtatacttactctttaaattaatggttaaatgagttgctttttgaagaaaaatattatttt 13127080  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
     ||||||||||| ||||||| | ||||| |||||||    
T  13127081 ctatcatttatatttataataactaaatcttattca 13127116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 22798157 - 22798098
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| ||||||||||||||||    
T  22798157 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccggtacac 22798098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 413 - 484
Target Start/End: Original strand, 31588540 - 31588610
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    |||||||| || ||||||||||||||| |||| |||||||||| ||||| |||| || ||||||||||||||    
T  31588540 gacaaatagttttttatttcataaaat-gatcattaatttataaatttatgaaacaaaagtaccggtacacc 31588610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 413 - 514
Target Start/End: Original strand, 32624481 - 32624584
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| | ||||||| |||||| ||||||||||||||||  ||| | |||| |||||||||||||||| | ||||| ||||| || | ||||||||    
T  32624481 gacaaataactttttattttataaaaatgatcgttaatttataagttttgtgaaacaagagtaccggtacactaaaatttctgagtataccgtagaagtt 32624580  T
Q  511 ccct 514  Q
    ||||    
T  32624581 ccct 32624584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 2851745 - 2851827
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| ||| |||  ||||||||| |||||||||||||||||||| | |||||||||||||    
T  2851745 aaattcatagttaaatgagttgttttttgaaaaaatatattatttttttatcatttataattataataactaaattttattca 2851827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 491
Target Start/End: Original strand, 9589525 - 9589591
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattt 491  Q
    |||||||||||||| |||| ||||||||||| ||||  ||| ||||||||||| |||||| ||||||    
T  9589525 tttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccgatacaccttaattt 9589591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 415 - 465
Target Start/End: Complemental strand, 10568580 - 10568530
Alignment:
Q  415 caaataattatttatttcataaaattgatcgttaatttatatatttaggaa 465  Q
    ||||||| |||||||||||||||||| ||| |||||||||| |||||||||    
T  10568580 caaataactatttatttcataaaattaatcattaatttatagatttaggaa 10568530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 491
Target Start/End: Original strand, 14967548 - 14967614
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattt 491  Q
    |||||||||||||| |||| ||||||||||| ||||  ||| ||||||||||| |||||| ||||||    
T  14967548 tttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccgatacaccttaattt 14967614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 25929634 - 25929676
Alignment:
Q  215 ttattttttatcatttataattataatgattaaattttattca 257  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  25929634 ttattttttatcatttataattataataattaaatcttattca 25929676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 256
Target Start/End: Original strand, 29959880 - 29960014
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| |||||||||| |||||| | |||||| ||| ||  |  ||  ||||| || ||||||| |||| | ||| |||||||| |||||||||    
T  29959880 gcaaattctatggtacacctaatatatttgagtgtatcagtacactcactctttaaattaatggttaaatgagttgtattttgaagaaaaatattatttt 29959979  T
Q  222 ttatcatttataattataatgattaaattttattc 256  Q
     ||||||||||| ||||||| | ||||| ||||||    
T  29959980 ctatcatttatatttataataactaaatcttattc 29960014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 416 - 501
Target Start/End: Original strand, 29960174 - 29960260
Alignment:
Q  416 aaataattatttatttcataaaatt-gatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||| |||||||||||||||||   ||||||||||||||| | ||| |||  |||||||||||||||||  | |||||||||||||    
T  29960174 aaatagttatttatttcataaaaaacgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttatgagtgtac 29960260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 35162352 - 35162485
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaacta-ttattt 220  Q
    ||||| ||||| ||||||| || | |||||| ||||  |||| |||||| ||  ||||| ||| |||||| |||||| ||| |||||||| || ||||||    
T  35162352 gcaaactttatggtacacccaaaa-atttaagtgtactggtacaccaaatctttaaattaataattaaatgagtttttttttgaagaaaaataattattt 35162450  T
Q  221 tttatcatttataattataatgattaaattttatt 255  Q
    ||||||||| | ||||||||| ||||||| |||||    
T  35162451 tttatcattgacaattataataattaaatcttatt 35162485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 411 - 461
Target Start/End: Complemental strand, 43059588 - 43059538
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatattta 461  Q
    ||||||||||| || ||||||||||||||||||| |||||||||| |||||    
T  43059588 ccgacaaataactaattatttcataaaattgatcattaatttataaattta 43059538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 12334476 - 12334541
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||  ||||||| |||||| ||||||||||| || |||||||||| ||||| ||||    
T  12334476 ttgaatttttatcactcataattgagaacattgattattttttacgataatatgtaaaaaaattac 12334541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 33210425 - 33210506
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| || ||||||| |||| | ||| |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  33210425 aaattaatggttaaatgagttgtcttttgaagaaaaatattattttctatcatttatatttataataactaaatcttattca 33210506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 416 - 501
Target Start/End: Complemental strand, 39816603 - 39816518
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||| |||||||||| | |||| |||||||||||||||| | ||| |||  |||||||||||||||||  | ||| |||||||||    
T  39816603 aaatagttatttatttaacaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtac 39816518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 1445952 - 1445900
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatat 332  Q
    |||||||||||||| | ||||||||| |||||||| |||||||| ||||||||    
T  1445952 ttgaatttttatcgcttataatagaggactttgatgattttatacgataatat 1445900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 5359895 - 5359955
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| ||||||||||| || |||||||||| |||||    
T  5359895 ttgaatttttatcactcataattgagaacattgattattttttacgataatatgtaaaaaa 5359955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 511
Target Start/End: Original strand, 16730040 - 16730128
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttc 511  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||    
T  16730040 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttc 16730128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 29666056 - 29665992
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaattta 344  Q
    |||||||||||| | |||||||| ||||  ||||||||||| ||||| || ||||||||||||||    
T  29666056 ttgaatttttattgctcataataaagaatattgattattttttatgagaaaatgttaaaaattta 29665992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 501
Target Start/End: Original strand, 29744219 - 29744295
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||||||| |||| ||||||||||| ||||  |||  || |||||||||||||  |||||| |||||||||    
T  29744219 tttatttcataaaaatgatagttaatttataaatttttgaagcaaaagtaccggtacactttaatttgtgagtgtac 29744295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 33678210 - 33678293
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt--ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| ||| |||| |||||||||  |||||||||||||||||||| | ||||| |||||||    
T  33678210 aaattcatagttaaatgagttattttttgaaaaaaaatattattttttttatcatttataattataataactaaatcttattca 33678293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 34259709 - 34259769
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  34259709 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 34259769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 42486842 - 42486782
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  42486842 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 42486782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 3425961 - 3426020
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaa 339  Q
    |||||||||||||  ||||||| |||||| ||||||||||| || |||||||||| ||||    
T  3425961 ttgaatttttatcactcataattgagaacattgattattttttacgataatatgtaaaaa 3426020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 8068409 - 8068350
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||| |||||||||||| |||| |||| ||||||||||||||||    
T  8068409 tttatttcattaaagtgatctttaatttatatattttatgaaacaagagtaccggtacac 8068350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 9589263 - 9589342
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttatt 255  Q
    ||||| ||||||||||| ||| | ||| ||||||||  |||||||| |||||  |||||||||||| ||||||| |||||    
T  9589263 aaattaatagttaaatatgttattttttgaagaaaaaaattattttctatcacctataattataataattaaatcttatt 9589342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 14096744 - 14096677
Alignment:
Q  188 aaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttatt 255  Q
    ||||||||| | ||| ||||||||  |||||||||||||||| | ||||||||| ||||||| |||||    
T  14096744 aaataagttattttttgaagaaaagaattattttttatcattgacaattataataattaaatcttatt 14096677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Original strand, 15726242 - 15726301
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||    
T  15726242 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacac 15726301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 483
Target Start/End: Complemental strand, 22279319 - 22279248
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||| || |||||||||| ||| |||||||||||||||| |||| | | || ||||||||||||||||    
T  22279319 gacaaatacttttttatttcattaaagtgatcgttaatttataaattttgtgcaacaagagtaccggtacac 22279248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 30753678 - 30753619
Alignment:
Q  286 ttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||| |||||||| |||||| ||||||||||| || |||||||||| ||||| ||||    
T  30753678 ttttatcattcataattgagaacattgattattttttacgataatatgtaaaaaaattac 30753619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 31236678 - 31236619
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||    
T  31236678 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacac 31236619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 32063615 - 32063556
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| |||||| |||||||||||||| | |||| ||||||||||||||||    
T  32063615 tttatttcattaaagtgatcggtaatttatatattttgtgaaacaagagtaccggtacac 32063556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 41802160 - 41802239
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttatt 255  Q
    ||||| ||||||||||| ||| | ||| ||||| ||  |||||||| |||||| |||||||||||| ||||||| |||||    
T  41802160 aaattaatagttaaatatgttattttttgaagagaaaaattattttctatcatctataattataataattaaatcttatt 41802239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 42597828 - 42597745
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| || ||| |||||||| | ||||||||| |||||||||||||||||| | ||||| |||||||    
T  42597828 aaattcatagttaaatgagttatttttttgaagaaaaatgttatttttttatcatttataattataataactaaatcttattca 42597745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 43411607 - 43411548
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    ||||||| || ||| ||||||||||||||||||||| | |||| ||||||||||||||||    
T  43411607 tttattttattaaagtgatcgttaatttatatattttgtgaaacaagagtaccggtacac 43411548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 702024 - 702078
Alignment:
Q  204 gaagaaaactattattt-tttatcatttataattataatgattaaattttattca 257  Q
    |||||||| |||||||| ||||||||||||||||||||| | ||||| |||||||    
T  702024 gaagaaaaatattatttatttatcatttataattataataactaaatcttattca 702078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 3425846 - 3425928
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||  |||| | ||| |||||||| ||||||||| |||||||||||||||||||  | ||||| |||||||    
T  3425846 aaattaatagttaaaagagttgttttttgaagaaaaatattatttttttatcatttataattataacaactaaatcttattca 3425928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 446 - 496
Target Start/End: Complemental strand, 4039538 - 4039488
Alignment:
Q  446 ttaatttatatatttaggaaataagagtaccggtacaccataatttatgag 496  Q
    |||||||||| ||||| ||| |||||||||||||||||| |||||| ||||    
T  4039538 ttaatttataaatttatgaagtaagagtaccggtacaccttaatttgtgag 4039488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 19518262 - 19518208
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgt 334  Q
    ||||||||||||| |||||||| |||||| || |||||||| || ||||||||||    
T  19518262 ttgaatttttatcattcataattgagaacattcattattttttacgataatatgt 19518208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 416 - 501
Target Start/End: Complemental strand, 30753546 - 30753460
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||| |||||||| |||||||  |||||||||||||||| | |||  || ||||||||||||||||||  | ||| |||||||||    
T  30753546 aaataactatttattacataaaaaatgatcgttaatttataaaattataaagtaagagtaccggtacacctcattttgtgagtgtac 30753460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 9629990 - 9630043
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  9629990 gaagaaaaatattattttctatcatttatatttataataactaaatcttattca 9630043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 13127288 - 13127357
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||| |||||||||||||||||  | |||||||||||||| | ||| |||  |||||||||||||||||    
T  13127288 aaatagttatttatttcataaaaaattatcgttaatttataaaattatgaagaaagagtaccggtacacc 13127357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 461
Target Start/End: Complemental strand, 23258627 - 23258582
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatattta 461  Q
    |||||||| ||||||| |||||||||||||||||||| || |||||    
T  23258627 aaataattctttatttaataaaattgatcgttaatttgtagattta 23258582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 25929710 - 25929763
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatg 333  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||    
T  25929710 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatg 25929763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 27980079 - 27980148
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtaca 482  Q
    ||||||||  || ||||| ||||||| |||||||||||||||| | ||| |||| |||||||||| ||||    
T  27980079 gacaaatagctaattattacataaaaatgatcgttaatttataaaattatgaaacaagagtaccgctaca 27980148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 512
Target Start/End: Complemental strand, 28770036 - 28769947
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcc 512  Q
    |||||||||| ||| |||||||||||||||| |||| | |||| ||||||||||||| ||   || || |||||||| ||||||||||||    
T  28770036 tttatttcattaaagtgatcgttaatttataaattttgtgaaacaagagtaccggtatactcaaaattgtgagtgtaccatagaagttcc 28769947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 516
Target Start/End: Original strand, 29996813 - 29996905
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatga-gtgta-catagaagttccctta 516  Q
    ||||||||||||||| ||||||||||||||| |||||   |  ||||||||||||| ||| |||||| ||| ||||| | ||||||||||||||    
T  29996813 tttatttcataaaat-gatcgttaatttataaatttatagagcaagagtaccggtaaaccttaatttgtgatgtgtaccgtagaagttccctta 29996905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 6e-36; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 125 - 345
Target Start/End: Original strand, 2290794 - 2291016
Alignment:
Q  125 aattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttttt- 223  Q
    |||| ||| ||||||| ||||||||| | |||| ||||| |||||||    |||||||||||||||| |||| | ||| |||||||| |||||||||||     
T  2290794 aattctatggtacacccaacatatttgagtgtaccggtacaccaaacacttaaatttatagttaaatgagttgttttttgaagaaaaatattattttttt 2290893  T
Q  224 atcatttataattataatgattaaattttattcacnnnnnnntt-aaccaaataaaattgaatttttatcgttcataatagagaactttgattattttat 322  Q
    |||||||||||||||||  || || | ||||||||        | ||| |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  2290894 atcatttataattataactataaactcttattcaccaaaagcgtcaacgaaataaaattgaatttttatcgattataatagagaactttgattattttat 2290993  T
Q  323 atgataatatgttaaaaatttac 345  Q
    | |||||||||| ||||||||||    
T  2290994 acgataatatgtaaaaaatttac 2291016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 134 - 332
Target Start/End: Original strand, 41742594 - 41742798
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt---ttgtttcgaagaaaactattattttttatcattt 230  Q
    ||||||| ||||||||| | |||| ||||| ||||| |||  || ||||||| ||||| ||||   || ||| |||||||| ||||||||||||||||||    
T  41742594 gtacacccaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgagttgtttttttttgaagaaaaatattattttttatcattt 41742693  T
Q  231 ataattataatgattaaattttattca-cnnnnnnnttaaccaaataaa--attgaatttttatcgttcataatagagaactttgattattttatatgat 327  Q
    ||||||||||||||||||| ||||||| |       | |||  ||||||   || ||||||||||| |||||||||| ||||||||||||||||||||||    
T  41742694 ataattataatgattaaatcttattcatcaaaagtgtaaacggaataaattttttaatttttatcgctcataatagataactttgattattttatatgat 41742793  T
Q  328 aatat 332  Q
    |||||    
T  41742794 aatat 41742798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 218 - 340
Target Start/End: Original strand, 23561212 - 23561335
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattgaatttttatcgttcataatagagaactttgatta 316  Q
    |||||||||||||||||||||||||||||||| |||| || |       | ||| |||||||||||||||||||||  || ||||||||||||||||| |    
T  23561212 ttttttatcatttataattataatgattaaatcttatgcatcaaaagcatcaacgaaataaaattgaatttttatcactcgtaatagagaactttgataa 23561311  T
Q  317 ttttatatgataatatgttaaaaa 340  Q
    |||||||||||||||||| |||||    
T  23561312 ttttatatgataatatgtaaaaaa 23561335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 142 - 340
Target Start/End: Original strand, 29682065 - 29682269
Alignment:
Q  142 aacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    ||||||||| | |||||||||| | |||  ||  || ||||||  ||||| |||| | ||| |||||||| |||||||||||||||||||||||||||||    
T  29682065 aacatatttgagtgtatcggtacatcaactctttaattttataagtaaatgagttgttttttgaagaaaaatattattttttatcatttataattataat 29682164  T
Q  242 gattaaattttattca-cnnnnnnnttaaccaaataaa-----attgaatttttatcgttcataatagagaactttgattattttatatgataatatgtt 335  Q
    |||||||||||||||| |       | ||| ||||| |      || ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||     
T  29682165 gattaaattttattcatcaaaagtgtaaacgaaatatatttttttttaatttttatcgctcataatagagaactttaattattttatacgataatatgta 29682264  T
Q  336 aaaaa 340  Q
    |||||    
T  29682265 aaaaa 29682269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 412 - 514
Target Start/End: Complemental strand, 43631157 - 43631054
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  |||||||||||||||||  ||| || ||||||| ||||||||||    
T  43631157 cgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacacctcaatctacgagtgtaccatagaagtt 43631058  T
Q  511 ccct 514  Q
    ||||    
T  43631057 ccct 43631054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 122 - 340
Target Start/End: Complemental strand, 43631455 - 43631231
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatt-t 220  Q
    ||||||| ||| ||||||||||||||||| | |||| ||||| ||||| |||  || ||||||| ||| | |||| | ||| |||||||| ||||||| |    
T  43631455 gcaaattctatggtacacctaacatatttgagtgtaccggtacaccaaccctttaattttataggtaattgagttgttttttgaagaaaaatattatttt 43631356  T
Q  221 tttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaaatt----gaatttttatcgttcataatagagaactttgatt 315  Q
    ||||| ||||||||||||||||||||||| ||||||| |       | ||| |||||   ||     ||||||||||| ||||||||||||||||| |||    
T  43631355 tttatgatttataattataatgattaaatcttattcatcaaaagtgtaaacgaaatattttttttaaaatttttatcgctcataatagagaactttaatt 43631256  T
Q  316 attttatatgataatatgttaaaaa 340  Q
    |||||||| |||||||||| |||||    
T  43631255 attttatacgataatatgtaaaaaa 43631231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 411 - 499
Target Start/End: Complemental strand, 15584644 - 15584556
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgt 499  Q
    |||| |||||| ||||| ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||  ||||||| ||||||    
T  15584644 ccgataaataactatttgttttataaaattgatcgttaatttatagatttaggaaacaagagtaccggtacactgtaatttacgagtgt 15584556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 1806536 - 1806617
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  1806536 aaattaatagttaaataagttgttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 1806617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 3214573 - 3214654
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| |||||||||||||||||||| |||||||| ||||||| |||||||    
T  3214573 aaattaatagttaaataagttattttttgaagaaaaatattattttttatcatttatgattataataattaaatcttattca 3214654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 11750773 - 11750692
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||| |||| | |||  || |||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  11750773 aaatttatagttaaatgagttgtttttttaaaaaaaatattattttttatcatttataattataataattaaattttattca 11750692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 501
Target Start/End: Complemental strand, 16087048 - 16086959
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  |||||||||||||||||  ||| || ||||||||    
T  16087048 cgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacacctcaatctacgagtgtac 16086959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 41742881 - 41742950
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtaca 482  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||||    
T  41742881 gacaaataactatttatttcataaaattgatcgttaatttatagatttatgaaacaagagtatcggtaca 41742950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 122 - 340
Target Start/End: Original strand, 30878316 - 30878544
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattt 220  Q
    |||||||||| |||||||| ||||||||| |||||| || || ||||||||   |||||||| ||||||| |||| || ||| |||  ||| |||||| |    
T  30878316 gcaaattttaccgtacaccgaacatatttgaatgtaccgatacaccaaacccttaaatttatggttaaatgagttattttttggaattaaaatattatat 30878415  T
Q  221 tttatcatttataattataatgattaaattttattcacnnnnnnntt-aaccaaataaaattga---------atttttatcgttcataatagagaactt 310  Q
    || |||||||||||||| ||||||||||| |||| |||        | ||| ||||||||||||         |||||||||| ||||||||||| ||||    
T  30878416 tt-atcatttataattacaatgattaaatcttatacaccaaaagcgtcaacaaaataaaattgatttttttgaatttttatcgctcataatagagtactt 30878514  T
Q  311 tgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||||| |||||||||| |||||    
T  30878515 tgattattttatacgataatatgtaaaaaa 30878544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 2291083 - 2291173
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| |||||||||||||||||||||| |||||||||| |||| |||   |||||||||||||||||  | |||| ||||||||    
T  2291083 ccgacaaataactatttatttcataaaattgatcattaatttataaatttgggatgaaagagtaccggtacacctcattttacgagtgtac 2291173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 16087178 - 16087116
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  16087178 aatttttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaattac 16087116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 15591555 - 15591615
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||    
T  15591555 ttgaatttttattgctcataatagagaactttgattattttatacgataatatgtaaaaaa 15591615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 17307005 - 17306870
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactatt-attt 220  Q
    ||||||||||| |||||||||| |||||| | |||||||||||||  |  ||  ||||| |||||||||| |||| | ||| |||||||| ||||  |||    
T  17307005 gcaaattttatggtacacctaatatatttgagtgtatcggtatacttattctttaaattaatagttaaatgagttgt-ttttgaagaaaaatattgtttt 17306907  T
Q  221 tttatcatttataattataatgattaaattttattca 257  Q
    ||||||| ||||||||||||| ||||||| |||||||    
T  17306906 tttatcacttataattataataattaaatcttattca 17306870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 414 - 513
Target Start/End: Complemental strand, 44963923 - 44963823
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttcc 512  Q
    |||||||| | |||||||||||||| |||| ||||||||||| ||||  ||| |||||||||||||||||| ||| || || ||||| ||||||||||||    
T  44963923 acaaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaaattgtgggtgtaccatagaagttcc 44963824  T
Q  513 c 513  Q
    |    
T  44963823 c 44963823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 414 - 481
Target Start/End: Original strand, 23561411 - 23561478
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtac 481  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| |||  | ||||||||||||    
T  23561411 acaaataactatttatttcataaaattgatcgttaatttatagatttatgaagcacgagtaccggtac 23561478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 30936183 - 30936092
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    ||||||||||||||||||| ||||||||||| ||||  ||| |||||||||||||||||| ||||||  | ||||| | |||||||||||||    
T  30936183 tttatttcataaaattgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagttccctt 30936092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 29682342 - 29682432
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| ||   |||||||| ||| ||||  |||||| ||||||||    
T  29682342 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgatgcaagagtactggtgcacctcaatttacgagtgtac 29682432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 41047194 - 41047112
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| || ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  41047194 aaattaatagttaaattagttgtttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 41047112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 15584776 - 15584711
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||| |||  |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  15584776 ttgaattttgatcactcataatagagaactttgattattttatacaataatatgtaaaaaatttac 15584711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 501
Target Start/End: Original strand, 15591689 - 15591778
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||| | ||||||||||||||||||| ||||||  ||| |||||||||  |  |||||||||||||| |||||||||| |||||    
T  15591689 cgacaaataactttttatttcataaaattgattgttaatgcataaatttaggaagcagaagtaccggtacaccttaatttatgaatgtac 15591778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 26413959 - 26413894
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    ||||| ||||||||||||||| | ||| |||||||| |||||||||||||||||||||||| ||||    
T  26413959 aaattaatagttaaataagttgttttttgaagaaaattattattttttatcatttataattctaat 26413894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 46575455 - 46575374
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||| ||||||||| |||| | ||| ||| |||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  46575455 aaatttttagttaaatgagttgttttttgaaaaaaaatattattttttatcatttataattataataactaaatcttattca 46575374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 47369571 - 47369490
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| ||| |||| |||| |||||||||||||||||||||||| | ||||| |||||||    
T  47369571 aaattcatagttaaataagttgttttttgaaaaaaaatatttttttttatcatttataattataataactaaatcttattca 47369490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 3602324 - 3602408
Alignment:
Q  174 aaaaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||||| |||||||||| |||| | ||| |||||||| ||||||||| |||||||||||||||||||| | ||||| |||||||    
T  3602324 aaaaattaatagttaaatgagttgttttttgaagaaaaatattatttttttatcatttataattataataactaaatcttattca 3602408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 15591385 - 15591503
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| || |||||||| ||||||||| | |||| | ||| |||| ||||  |||||||||||||||| | || |  || |||||||| |||| ||||    
T  15591385 gcaaattctaccgtacacccaacatatttgagtgtaccagtacaccagacctttaaatttatagttaaatgaattattcttagaagaaaaatatt-tttt 15591483  T
Q  222 ttatcatttataattataat 241  Q
    ||||||||||||||||||||    
T  15591484 ttatcatttataattataat 15591503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 47258916 - 47258857
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaa 339  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||| |||||||||| ||||    
T  47258916 ttgaatttttatcgctcatattagagaattttgattattttatacgataatatgtaaaaa 47258857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 23110782 - 23110716
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatt-ttttatcatttataattataat 241  Q
    |||||||||||||||| |||| | ||| |||||||| ||||||| ||||||||||||||||||||||    
T  23110782 aaatttatagttaaatgagttgtttttagaagaaaaatattatttttttatcatttataattataat 23110716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 38665943 - 38666025
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| || ||||||| |||| || ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  38665943 aaattcatggttaaatgagttgtttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 38666025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 413 - 501
Target Start/End: Complemental strand, 7574216 - 7574127
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||| | |||||||||||||| ||||||||||||||||  ||| | |||| |||||||| ||||||| | ||||| |||||||||    
T  7574216 gacaaataaatttttatttcataaaaatgatcgttaatttataagttttgtgaaacaagagtactggtacactaaaatttttgagtgtac 7574127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 17020204 - 17020265
Alignment:
Q  284 atttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||  |||||||||||||||||||||||||||||  ||||||||| ||||| ||||    
T  17020204 atttttatccctcataatagagaactttgattattttatacaataatatgtaaaaaaattac 17020265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 425 - 512
Target Start/End: Original strand, 25867222 - 25867311
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcc 512  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| ||||||||||||||||   || || |||||||| ||||||||||||    
T  25867222 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttcc 25867311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 45196894 - 45196801
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctta 516  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| ||||||||||||||||    
T  45196894 tttatttcattaaagtgatcattaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccctta 45196801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 9923387 - 9923479
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||||    
T  9923387 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccctt 9923479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 493
Target Start/End: Original strand, 11486312 - 11486380
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttat 493  Q
    ||||||||||||||  ||| ||||||||||| ||||  ||| |||||||||||||||||| ||||||||    
T  11486312 tttatttcataaaaaagatagttaatttatagatttttgaagtaagagtaccggtacaccttaatttat 11486380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 16087334 - 16087210
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttat 232  Q
    ||||||||||||||||| | |||| ||||| |||||   |  || ||||||  ||| | |||| | ||| |||||||| ||||||||||| || ||||||    
T  16087334 gtacacctaacatatttgagtgtaccggtacaccaactttttaattttataagtaattgagttgttttttgaagaaaaatattatttttttatgatttat 16087235  T
Q  233 aattataatgattaaattttattca 257  Q
    ||||||||||||||||| |||||||    
T  16087234 aattataatgattaaatcttattca 16087210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 501
Target Start/End: Complemental strand, 22967505 - 22967422
Alignment:
Q  420 aattatttatttcataaaat--tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||||||||||||   | |||||||||||||| | ||| ||| ||||||||||||||||||  ||||||| |||||||    
T  22967505 aattatttatttcataaaaaaataatcgttaatttataaaattatgaagtaagagtaccggtacacctcaatttataagtgtac 22967422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 32186513 - 32186421
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac-atagaagttccctt 515  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| ||||||||||||||||   || || ||||||||| |||||| |||||||    
T  32186513 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtactatagaaattccctt 32186421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 42039619 - 42039711
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||||    
T  42039619 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccctt 42039711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 8578025 - 8577943
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgag 496  Q
    ||||||||  ||||||||| ||||||| ||||||||||||||| ||||| ||| ||||||||  ||||||||  ||||||||||    
T  8578025 gacaaatacctatttattttataaaat-gatcgttaatttataaatttatgaagtaagagtattggtacacctcaatttatgag 8577943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 236
Target Start/End: Complemental strand, 23608402 - 23608283
Alignment:
Q  117 taaaagcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactatt 216  Q
    |||| ||||||| ||  ||||||| ||||||||| | ||||  |||| || || |||  || ||||||| ||||| |||| | ||| |||||||| ||||    
T  23608402 taaaggcaaattctacggtacacccaacatatttgagtgtactggtacactaaccctttaattttatagataaatgagttgttttttgaagaaaaatatt 23608303  T
Q  217 attttttatcatttataatt 236  Q
    ||||||||||||||||||||    
T  23608302 attttttatcatttataatt 23608283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 37504890 - 37504835
Alignment:
Q  186 ttaaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    ||||||||||| ||||| |||||||| ||||||||| ||||||||||| |||||||    
T  37504890 ttaaataagttgtgttttgaagaaaaatattattttatatcatttatatttataat 37504835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 42902476 - 42902417
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||||||||||||||||||||    
T  42902476 tttatttcattaaagtgatcattaatttatatattttgtgaaataagagtaccggtacac 42902417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 15584891 - 15584810
Alignment:
Q  176 aaatttatagttaaataagttttgtttcg-aagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||| |||||| |||   |||||||  ||||||||||||| | ||| ||||||||||||||||||||||||    
T  15584891 aaatttatagttaaatgagtttttttttttaagaaaataattattttttatc-tctatgattataatgattaaattttattca 15584810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 15715959 - 15716041
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactatta-ttttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||| |||||||||||||| ||||||||| | ||||| |||||||    
T  15715959 aaattcatagttaaatgagttgttttttgaagaaaaatattatttttttatcatttaaaattataataactaaatcttattca 15716041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 24953280 - 24953198
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||| |||||| |||||||||||||||||| | ||||| |||||||    
T  24953280 aaattcatagttaaatgagttgttttttgaagaaaaatattttttttttatcatttataattataataactaaatcttattca 24953198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 416 - 494
Target Start/End: Complemental strand, 37118432 - 37118354
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatg 494  Q
    ||||| || |||||| ||||||| |||||||||||||||  ||||| |||||| | ||| ||||||||| |||||||||    
T  37118432 aaatatttctttattacataaaaatgatcgttaatttattgatttatgaaataggtgtatcggtacaccttaatttatg 37118354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 460
Target Start/End: Original strand, 41809505 - 41809551
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatattt 460  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  41809505 acaaataattctttatttcataaaattgatagttaatttatagattt 41809551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 491
Target Start/End: Complemental strand, 45857564 - 45857498
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattt 491  Q
    |||||||||||||| | || ||||||||||| ||||  ||| |||||||||||||||||| ||||||    
T  45857564 tttatttcataaaagtaatagttaatttataaatttttgaagtaagagtaccggtacaccttaattt 45857498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 1806651 - 1806716
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| ||||| ||||    
T  1806651 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaaattac 1806716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 7583363 - 7583279
Alignment:
Q  175 aaaatttatagttaaataagttttgtttcgaagaaaactattatttttt--atcatttataattataatgattaaattttattca 257  Q
    |||||| |||||||||| |||| | ||| |||||||| |||| ||||||  |||||||||||||||||| | ||||| |||||||    
T  7583363 aaaattcatagttaaatgagttgttttttgaagaaaaatattgttttttttatcatttataattataataactaaatcttattca 7583279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 35291678 - 35291597
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| || ||||||| |||| | ||| |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  35291678 aaattaatggttaaatgagttgttttttgaagaaaaatattattttctatcatttatatttataataactaaatcttattca 35291597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 35357756 - 35357837
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| || ||||||| |||| | ||| |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  35357756 aaattaatggttaaatgagttgttttttgaagaaaaatattattttctatcatttatatttataataactaaatcttattca 35357837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 39558606 - 39558743
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattt 220  Q
    ||||||| ||| ||||||| |  |||||||| |||| ||||| ||| |  ||  ||||| |||||||||| | || || ||| |||||||| |||| |||    
T  39558606 gcaaattctatggtacacccactatatttaagtgtaccggtacacccattctttaaattcatagttaaatgaattgtttttttgaagaaaaatatttttt 39558705  T
Q  221 t-ttatcatttataattataatgattaaattttattca 257  Q
    | |||||||||||||||||||| | |||||||||||||    
T  39558706 ttttatcatttataattataataactaaattttattca 39558743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 47258778 - 47258681
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttcc 512  Q
    |||||| ||||||||| ||||||||||||||||||||||| | |||| ||| || |||| ||||| |||  ||||||  |||||| | ||||||||||    
T  47258778 aaataaatatttattttataaaattgatcgttaatttatagacttagaaaacaaaagtaacggtaaacctcaatttagaagtgtagcgtagaagttcc 47258681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 15954195 - 15954267
Alignment:
Q  185 gttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||||| |||| | ||| |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  15954195 gttaaatgagttgttttttgaagaaaaatattattttctatcatttatatttataataactaaatcttattca 15954267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 24505440 - 24505532
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| |||||||||||| |||| |||| ||||||||||||||||   || || |||||||| |||| ||||||||||    
T  24505440 tttatttcattaaagtgatctttaatttatatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtaccataaaagttccctt 24505532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 25411862 - 25411798
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaattta 344  Q
    |||||||||||| | |||||||| ||||  ||||||||||| ||||| || ||||||||||||||    
T  25411862 ttgaatttttattgctcataataaagaatattgattattttttatgagaaaatgttaaaaattta 25411798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 26413840 - 26413776
Alignment:
Q  281 tgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| ||||| ||||    
T  26413840 tgaatttttatcactcataatcgagaacatttattattttttatgataatatgtaaaaaaattac 26413776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 28265105 - 28265022
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt--atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||| ||||||  |||||||||||||||||| | ||||| |||||||    
T  28265105 aaattcatagttaaatgagttattttttgaagaaaaatattgttttttttatcatttataattataataactaaatcttattca 28265022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 39444282 - 39444374
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| ||||||||| ||||||   || |||| ||| || |||||||||||||||    
T  39444282 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccagtacactcaaaattataagtataccatagaagttccctt 39444374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 41047078 - 41047018
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| || ||| ||||||||||| ||||||||||||| |||||    
T  41047078 ttgaatttttatcactcataattgaaaacattgattattttttatgataatatgtaaaaaa 41047018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 45232395 - 45232318
Alignment:
Q  182 atagttaaataagttttgtttcgaagaaaactattatttttt---atcatttataattataatgattaaattttattca 257  Q
    |||||||||| |||||| ||| |||||||| |||||||||||   |||||||||||| ||||| | |||||||||||||    
T  45232395 atagttaaatgagtttttttt-gaagaaaaatattatttttttttatcatttataatcataataactaaattttattca 45232318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 3062210 - 3062301
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||| ||| ||||| ||||||| ||||||| | |||| ||||||||||||||||   || || |||||||| ||||||||||||||    
T  3062210 tttatttcattaaagtgatctttaatttctatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccct 3062301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 454
Target Start/End: Original strand, 17020332 - 17020375
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttat 454  Q
    ||||||||||| |||||| || ||||||||||||||||||||||    
T  17020332 ccgacaaataactatttacttaataaaattgatcgttaatttat 17020375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 483
Target Start/End: Original strand, 17335042 - 17335113
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||| || |||||||||| ||| |||||||||||||||| |||| | | || ||||||||||||||||    
T  17335042 gacaaatacttttttatttcattaaagtgatcgttaatttataaattttgtgcaacaagagtaccggtacac 17335113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 24812134 - 24812217
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaac-tattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||| |||| | ||| ||| ||||  ||||||||| |||||||||||||||||||| | ||||| |||||||    
T  24812134 aaatttatagttaaatgagttgttttttgaaaaaaaaatattatttttttatcatttataattataataactaaatcttattca 24812217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 40947063 - 40947004
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||||||||||||||||||| |  ||| ||||||||||||||||    
T  40947063 tttatttcattaaagtgatcgttaatttatatattttgtaaaacaagagtaccggtacac 40947004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 41715229 - 41715170
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| ||||||| ||||||||    
T  41715229 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtatcggtacac 41715170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Original strand, 47220272 - 47220331
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||    
T  47220272 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacac 47220331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 1282502 - 1282592
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| ||||||||||| ||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||    
T  1282502 tttatttcattaaagtgatcattaatttatatgttttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccc 1282592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 484
Target Start/End: Complemental strand, 6791536 - 6791474
Alignment:
Q  423 tatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||||||||||||||  ||||||||| |||||| | ||| |||| |||||||||||||||||    
T  6791536 tatttatttcataaaaaatgatcgttactttataaaattatgaaaaaagagtaccggtacacc 6791474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 491
Target Start/End: Complemental strand, 8770459 - 8770393
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattt 491  Q
    |||||||||||||| |||| ||||||||||| ||||  |||  ||||||| ||||||||| ||||||    
T  8770459 tttatttcataaaaatgatagttaatttatagatttttgaagcaagagtatcggtacaccttaattt 8770393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 416 - 501
Target Start/End: Complemental strand, 35291425 - 35291339
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||| |||||||||||||||||  | |||||||||||||| | ||| |||  |||||||||||||||||  | ||| |||||||||    
T  35291425 aaatagttatttatttcataaaaaataatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtac 35291339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 3214691 - 3214748
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  3214691 aatttttatcactcataattgagaacattcattattttttatgataatatgtaaaaaa 3214748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 515
Target Start/End: Original strand, 15954588 - 15954669
Alignment:
Q  435 aaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||| |||||||||||||||| | ||| |||  |||||||||||||||||  | ||| |||||||| | |||||||||||||    
T  15954588 aaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccctt 15954669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 35859398 - 35859357
Alignment:
Q  214 attattttttatcatttataattataatgattaaattttatt 255  Q
    |||||||||||||||| ||||||||||| ||||||| |||||    
T  35859398 attattttttatcattgataattataataattaaatcttatt 35859357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 501
Target Start/End: Complemental strand, 37504661 - 37504572
Alignment:
Q  413 gacaaataattatttatttcat-aaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||| ||||||||||||| |||| |||||||||||||||| | ||| |||  ||||||| | |||||||  | ||| |||||||||    
T  37504661 gacaaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaataaagagtatcagtacacctcattttgtgagtgtac 37504572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 514
Target Start/End: Original strand, 42975201 - 42975302
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac-atagaagttcc 512  Q
    ||||||| || |||||||||||||| | || ||||||||||| ||||  ||| ||| | || ||||||||| ||||||| |  ||||| |||||||||||    
T  42975201 acaaatagttttttatttcataaaaataatagttaatttataaatttttgaagtaaaaatatcggtacaccttaatttacggatgtacaatagaagttcc 42975300  T
Q  513 ct 514  Q
    ||    
T  42975301 ct 42975302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 755
Target Start/End: Original strand, 45837936 - 45837977
Alignment:
Q  714 gattgcttaatatgtgcccttaggacacaagttagcatgacc 755  Q
    |||||||||| ||||||||| ||| |||||||||||||||||    
T  45837936 gattgcttaacatgtgccctaagggcacaagttagcatgacc 45837977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 46291335 - 46291270
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||  ||||||| |||||  ||||||||||| || |||||||||| ||||| ||||    
T  46291335 ttgaatttttatcactcataattgagaaaattgattattttttacgataatatgtaaaaaaattac 46291270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 1e-31; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 215 - 345
Target Start/End: Complemental strand, 10456348 - 10456217
Alignment:
Q  215 ttattttttatcatttataattataatgattaaattttattcacnnnnnnntt-aaccaaataaaattgaatttttatcgttcataatagagaactttga 313  Q
    ||||||||||||||||||||||||||||||||| | ||||||||        | ||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  10456348 ttattttttatcatttataattataatgattaactgttattcaccaaaaacgtcaacgaaataaaattgaacttttatctttcataatagagaactttga 10456249  T
Q  314 ttattttatatgataatatgttaaaaatttac 345  Q
    ||||| |||| |||||||||||||||||||||    
T  10456248 ttattgtatacgataatatgttaaaaatttac 10456217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 142 - 340
Target Start/End: Original strand, 17821552 - 17821752
Alignment:
Q  142 aacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    ||||||||| | ||| | |||| |||| ||||  |||||||||||||||| | || | ||| |||||||  | || ||||||||||||||||||||||||    
T  17821552 aacatatttgagtgtcttggtacaccagacctttaaatttatagttaaatgaattatttttagaagaaatttttttttttttatcatttataattataat 17821651  T
Q  242 gattaaatt-ttattcacnnnnnnntt-aaccaaataaaattgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaa 339  Q
     |||||| | ||||||||        | ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  17821652 aattaaaatcttattcaccaaaagcatcaacgaattaaaattgaatttttatcgctcataatagagaactttgattattttatatgataatatgtaaaaa 17821751  T
Q  340 a 340  Q
    |    
T  17821752 a 17821752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 124 - 340
Target Start/End: Complemental strand, 4115055 - 4114838
Alignment:
Q  124 aaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttttt 223  Q
    ||||| ||| ||||| | ||||||||| | ||||||| || | ||| |||  || ||||||| ||||| |||| | ||| |||||||| |||||||||||    
T  4115055 aaattctatggtacatccaacatatttgagtgtatcgatacatcaatcctttaattttataggtaaatgagttgttttttgaagaaaaatattatttttt 4114956  T
Q  224 atcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattgaatttttatcgttcataatagagaactttgattattttat 322  Q
    |||||||||||||||||||||||||| ||||||| |       | ||| |||| |  ||   ||||||||| ||||||||||||||||||||||||||||    
T  4114955 atcatttataattataatgattaaatcttattcatcaaaagtgtaaacgaaatcattttttttttttatcgctcataatagagaactttgattattttat 4114856  T
Q  323 atgataatatgttaaaaa 340  Q
    | |||||||||| |||||    
T  4114855 acgataatatgtaaaaaa 4114838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 411 - 497
Target Start/End: Complemental strand, 10456150 - 10456064
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagt 497  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||| ||||||||| ||| | |||||||||||||||||||||||||    
T  10456150 ccgataaataactatttatttcataaaattgatagttaatttatagatttaggaagtaaaaataccggtacaccataatttatgagt 10456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 16114567 - 16114477
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| | || |||||||||||||||||  |||||| ||||||||    
T  16114567 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatggaacaagagtaccggtacacctcaatttacgagtgtac 16114477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 39620192 - 39620329
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt--ttgtttcgaagaaaactattatt 219  Q
    ||||||||||| ||||||| || |||||| | |||||||||| ||| |  ||  ||||| |||||||||||||||  || ||| |||||||| |||||||    
T  39620192 gcaaattttatggtacacccaatatatttgagtgtatcggtacacccactctttaaattaatagttaaataagttgtttttttagaagaaaaatattatt 39620291  T
Q  220 ttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||| | ||||| |||||||    
T  39620292 ttttatcatttataattataataactaaatcttattca 39620329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 40947115 - 40947034
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  40947115 aaattaatagttaaataagttgttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 40947034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 340
Target Start/End: Complemental strand, 16114779 - 16114640
Alignment:
Q  205 aagaaaactattattttttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattg---aatttttatcgttcataa 300  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| |       | ||| ||||| | ||    ||||||||||| || |||    
T  16114779 aagaaaaatattattttttatcatttataattataatgattaaatcttaatcatcaaaagtgtaaacaaaatatatttttttaatttttatcgctcctaa 16114680  T
Q  301 tagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  16114679 tagagaactttgattattttatacgataatatgtaaaaaa 16114640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 38618099 - 38618000
Alignment:
Q  157 atcggtataccaaacctaaaaatttatagtt-aaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttatt 255  Q
    |||||||| |||||| |  |||||||||||| |||| | || | ||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  38618099 atcggtattccaaacttttaaatttatagtttaaatgaattgttttttgaagaaaaatattattttttatcatttataattataatgattaaatcttatt 38618000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 512
Target Start/End: Original strand, 17821825 - 17821927
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtaca-tagaagt 509  Q
    |||| |||||| | ||||||||||||||||||| ||||||  ||| |||||||||  |||||||||  |||||| ||||||||||||||||| |||||||    
T  17821825 ccgagaaataactttttatttcataaaattgattgttaatgcataaatttaggaagcaagagtaccaatacaccttaatttatgagtgtacagtagaagt 17821924  T
Q  510 tcc 512  Q
    |||    
T  17821925 tcc 17821927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 35896764 - 35896683
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| || ||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  35896764 aaattaatagttaaataagttgttttttgaggaaaaatattattttttatcatttataattataataactaaatcttattca 35896683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 413 - 501
Target Start/End: Original strand, 14947469 - 14947557
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||  ||  ||||||||| |||||||  ||||||  |||||||    
T  14947469 gacaaataattatttatttcataaaattgatcgttagtttataaatttataaagcaagagtaccagtacacctcaatttacaagtgtac 14947557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 38617962 - 38617898
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaattta 344  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||||| |||| ||||    
T  38617962 ttgaatttttatcgctcataatagataactttaattattttatatgataatatgtcaaaatttta 38617898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 38073207 - 38073137
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||    
T  38073207 gacaaatatctatttatttcataaaat-gatcgttaatttataaatttatgaagtaagagtaccggtacacc 38073137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 33494102 - 33494167
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||| ||||||||||||| |||||||||||| || |||||||||| ||||| ||||    
T  33494102 ttgaatttttatcgctcataatagagaattttgattattttttacgataatatgtaaaaaaattac 33494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 412 - 501
Target Start/End: Complemental strand, 38617829 - 38617741
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||| |||| ||||||||||||| || ||||||||||| ||||| |||  |||||||||||||||||  |||||| ||||||||    
T  38617829 cgacaaataactatt-atttcataaaattaattgttaatttatagatttacgaagcaagagtaccggtacacctcaatttacgagtgtac 38617741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 40495520 - 40495603
Alignment:
Q  176 aaatttatagttaaataagtt--ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| ||||  || ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  40495520 aaattcatagttaaatgagttgttttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 40495603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 425 - 514
Target Start/End: Complemental strand, 5084929 - 5084838
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac-atagaagttccct 514  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || |||||||||||| |||||||||||||    
T  5084929 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattatgagtgtacgatagaagttccct 5084838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 413 - 480
Target Start/End: Complemental strand, 42640951 - 42640885
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggta 480  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||    
T  42640951 gacaaatacctatttatttcataaaat-gatcgttaatttataaatttatgaagtaagagtaccggta 42640885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 513
Target Start/End: Complemental strand, 3724043 - 3723941
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||| || |||||||||| ||| ||||| |||||||||||| |||| |||| ||||||||||||||||   || || |||||||| ||||||||||    
T  3724043 gacaaatacttttttatttcattaaagtgatctttaatttatatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagtt 3723944  T
Q  511 ccc 513  Q
    |||    
T  3723943 ccc 3723941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 4114765 - 4114676
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||| |||||| |||||||||||||||||||||||||| |||||| ||||| | ||  ||||||||| ||||||  |||||| ||||||||    
T  4114765 ccgataaataactatttatttcataaaattgatcgttagtttatagatttatg-aagcagagtaccgttacacccgaatttacgagtgtac 4114676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 6945395 - 6945477
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||||||| |||||||||||||||||||| | ||||| |||||||    
T  6945395 aaattaatagttaaatgagttgttttttgaagaaaaatattatttttttatcatttataattataataactaaatcttattca 6945477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 21404550 - 21404469
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||| |||||||||||||||||||||| | | ||||| |||||||    
T  21404550 aaattcatagttaaatgagttgttttttgaagaaaaatatttttttttatcatttataattatagtaactaaatcttattca 21404469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 425 - 516
Target Start/End: Original strand, 40533568 - 40533661
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctta 516  Q
    |||||||||| ||| ||||| |||||||||||| |||| |||| ||||||||||||||||   || || |||||||| ||||||||||||||||    
T  40533568 tttatttcattaaagtgatctttaatttatatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccctta 40533661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 16814941 - 16814849
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||||    
T  16814941 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtatcatagaagttccctt 16814849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 16854221 - 16854129
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||||    
T  16854221 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtatcatagaagttccctt 16854129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 519
Target Start/End: Original strand, 37725868 - 37725964
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaaaa 519  Q
    |||||||||| ||| ||||| ||| ||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||||||||    
T  37725868 tttatttcattaaagtgatctttagtttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttcccttaaaa 37725964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 215 - 258
Target Start/End: Original strand, 833600 - 833643
Alignment:
Q  215 ttattttttatcatttataattataatgattaaattttattcac 258  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  833600 ttattttttatgatttataattataatgattaaatcttattcac 833643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 257
Target Start/End: Complemental strand, 4298306 - 4298171
Alignment:
Q  123 caaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttt 222  Q
    |||||||||| ||||||  || |||||| | |||| ||||| ||| |  ||  ||||| ||||||| || |||| | ||| |||||||| ||||||||||    
T  4298306 caaattttatggtacactcaatatatttgagtgtaccggtacacccattctttaaattaatagttacatgagttgttttttgaagaaaaatattattttt 4298207  T
Q  223 t-atcatttataattataatgattaaattttattca 257  Q
    | |||||||||||||||||| | ||||| |||||||    
T  4298206 ttatcatttataattataataactaaatcttattca 4298171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 16637336 - 16637297
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  16637336 ttttttatcatttataattataatgattaaatcttattca 16637297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 425 - 518
Target Start/End: Original strand, 28394385 - 28394480
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaaa 518  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||| |||||    
T  28394385 tttatttcattaaagtgatcattaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttcctttaaa 28394480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 411 - 482
Target Start/End: Original strand, 33494237 - 33494308
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtaca 482  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||| ||| | |||  |||||||||| ||||    
T  33494237 ccgacaaataactctttatatcataaaattgatcgttaatttataaattaaagaagcaagagtaccgataca 33494308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 413 - 483
Target Start/End: Complemental strand, 36947584 - 36947513
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||| || |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||    
T  36947584 gacaaatacttttttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacac 36947513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 45157531 - 45157666
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||||| || |||||| | |||| ||||| ||| |  ||  ||||| || ||||||| |||| | ||| |||||||| |||||||||    
T  45157531 gcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatggttaaatgagttgttttttgaagaaaaatattatttt 45157630  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
     ||||||||||| ||||||| | ||||| |||||||    
T  45157631 ctatcatttatatttataataactaaatcttattca 45157666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 425 - 483
Target Start/End: Original strand, 45555699 - 45555758
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||||||||||||||||||||    
T  45555699 tttatttcattaaagtgatcattaatttatatattttgtgaaataagagtaccggtacac 45555758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 513
Target Start/End: Complemental strand, 2316928 - 2316838
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| |||||||||||| |||| |||| ||||||||||||||||   || || |||||||| |||||||||||||    
T  2316928 tttatttcattaaagtgatctttaatttatatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccc 2316838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 14947270 - 14947304
Alignment:
Q  215 ttattttttatcatttataattataatgattaaat 249  Q
    |||||||||||||||||||||||||||||||||||    
T  14947270 ttattttttatcatttataattataatgattaaat 14947304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 461
Target Start/End: Complemental strand, 6588338 - 6588289
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatattta 461  Q
    |||||||||||| |||||||||||||| | || |||||||||||||||||    
T  6588338 cgacaaataattctttatttcataaaaataattgttaatttatatattta 6588289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 38064741 - 38064794
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| ||||||||||||||||||||| ||||||| | ||||| |||||||    
T  38064741 gaagaaaaatattattttttatcatttatatttataataactaaatcttattca 38064794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 44144436 - 44144355
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||  |||| | ||| |||||||| |||| ||||||||||||||| |||||||| | ||||| |||||||    
T  44144436 aaattcatagttaaaggagttgttttttgaagaaaaatatttttttttatcatttatgattataataactaaatcttattca 44144355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 501
Target Start/End: Original strand, 45157818 - 45157907
Alignment:
Q  413 gacaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||| |||||||||||||||||  |||||||||||||||| | ||| |||  ||||||| |||||||||  | ||| |||||||||    
T  45157818 gacaaatagttatttatttcataaaaaatgatcgttaatttataaacttatgaagaaagagtatcggtacacctcattttgtgagtgtac 45157907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 1580483 - 1580423
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  1580483 ttgaatttttatcactcataattgagaacattcattattttttatgataatatgtaaaaaa 1580423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 4108477 - 4108541
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaattta 344  Q
    |||||||||||| | |||||||| ||||  ||||||||||| ||||| || ||||||||||||||    
T  4108477 ttgaatttttattgctcataataaagaatattgattattttttatgagaaaatgttaaaaattta 4108541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 6657762 - 6657854
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| |||||||||||||||| |||| | | || ||||||||||||||||   || ||||| ||||| |||||||||||||||    
T  6657762 tttatttcattaaagtgatcgttaatttataaattttgtgcaacaagagtaccggtacactcaaaattatgggtgtaccatagaagttccctt 6657854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 9122508 - 9122456
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcat 228  Q
    |||||||||||||||| |||| | ||| |||||||| ||||||||||||||||    
T  9122508 aaatttatagttaaatgagttattttttgaagaaaaatattattttttatcat 9122456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 466
Target Start/End: Complemental strand, 16637129 - 16637077
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaa 466  Q
    |||||||| | |||||||||||||||| ||||||||||| || ||||||||||    
T  16637129 acaaataactctttatttcataaaattaatcgttaatttgtagatttaggaaa 16637077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 511
Target Start/End: Original strand, 21836602 - 21836690
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttc 511  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| ||||| ||||||||||   || || |||||||| |||||||||||    
T  21836602 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagcaccggtacactcaaaattgtgagtgtaccatagaagttc 21836690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 35896649 - 35896589
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  35896649 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 35896589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 39620363 - 39620423
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  39620363 ttgaatttttatcactcataatcgagaacattaattattttttatgataatatgtaaaaaa 39620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 519
Target Start/End: Original strand, 41839971 - 41840067
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttagga-aataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaaaa 519  Q
    |||||||||| ||| |||||||||||||||| |||| | | || ||||||||||||||||   || |||||  |||| |||||||||||||||||||    
T  41839971 tttatttcattaaagtgatcgttaatttataaatttggtacaacaagagtaccggtacactcaaaattatggatgtaccatagaagttcccttaaaa 41840067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 6438261 - 6438194
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattta 492  Q
    |||||||||||||| | || ||||||||||| ||||  ||| |||||||||||| ||||| |||||||    
T  6438261 tttatttcataaaaattatagttaatttataaatttttgaattaagagtaccggcacaccttaattta 6438194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 18576390 - 18576331
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||    
T  18576390 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacac 18576331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 27401035 - 27401106
Alignment:
Q  414 acaaataattatttatttcat-aaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||||||||||||||||||| |||| |||||||||||||||| | ||| |||  ||||||| | |||||||    
T  27401035 acaaataattatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtatcagtacacc 27401106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 32602614 - 32602575
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  32602614 ttttttatcatttataattataataactaaattttattca 32602575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 35292828 - 35292919
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||| ||| ||||  |||||||||||| |||| |||| ||||||||||||||||   || || |||||||| ||||||||||||||    
T  35292828 tttatttcattaaagtgatatttaatttatatattttatgaaacaagagtaccggtacacttaaaattgtgagtgtaccatagaagttccct 35292919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 9589168 - 9589250
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||| |||| |||||||||||||||||| | | ||||| |||||||    
T  9589168 aaattcatagttaaatgagttgttttttgaagaaaaatattttttttttatcatttataattatagtaactaaatcttattca 9589250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 16637259 - 16637197
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||| ||||||||||||| |||||||||||| ||  |||||| || ||||| ||||    
T  16637259 aatttttatcgctcataatagagaattttgattattttttacaataataggtaaaaaagttac 16637197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 18999071 - 18998989
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| ||| |||| ||||||| | |||||||||||||||||||| | ||||| |||||||    
T  18999071 aaattcatagttaaatgagttgttttttgaaaaaaaatattattctcttatcatttataattataataactaaatcttattca 18998989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 412 - 513
Target Start/End: Complemental strand, 19268668 - 19268566
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||||  | |||||||||||||| ||||||||||||| || ||||| |||| || | ||| | ||||||  ||||| ||||| || ||||||||||    
T  19268668 cgacaaatagctctttatttcataaaaatgatcgttaatttgtaaatttatgaaacaataatactgatacacctcaatttgtgagtataccatagaagtt 19268569  T
Q  511 ccc 513  Q
    |||    
T  19268568 ccc 19268566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 33493532 - 33493613
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttt-tatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||| |||||| | ||| ||| |||  |||||||||| ||||||||||||||||||| ||||||| |||||||    
T  33493532 aaattaatagttaa-taagttgttttttgaaaaaatatattatttttctatcatttataattataataattaaatcttattca 33493613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 9589287 - 9589344
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  9589287 aatttttatcactcataattgagaacattcattattttttatgataatatgtaaaaaa 9589344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 13568302 - 13568209
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctta 516  Q
    |||||||||| ||| ||||| ||||||||||||||| |  ||| || |||||||||||||   || || |||||||| ||||||||||||||||    
T  13568302 tttatttcattaaagtgatctttaatttatatattttgtaaaacaacagtaccggtacactcaaaattgtgagtgtaccatagaagttccctta 13568209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 14533227 - 14533095
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||||| |||| |||||||||||| |||| |||||| |   ||||| |||||||||| |||| | ||| | || |||  ||||||||    
T  14533227 gcaaattctatggtacacccaaca-atttaaatgtattggtacaccaaatccttaaattaatagttaaatgagttattttttgtaggaaaaaattatttt 14533129  T
Q  222 ttatcatttataattataatgattaaattttatt 255  Q
     |||||  |||||||||||| | ||||| |||||    
T  14533128 ctatcacctataattataataactaaatcttatt 14533095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 27400813 - 27400866
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  27400813 gaagaaaaatattattttctatcatttatatttataataactaaatcttattca 27400866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 30980935 - 30980996
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataatta 237  Q
    ||||| |||||||||| |||| | ||| |||||||| |||||||||||||||  ||||||||    
T  30980935 aaattaatagttaaatgagttgttttttgaagaaaaatattattttttatcacctataatta 30980996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 249
Target Start/End: Original strand, 33493951 - 33494060
Alignment:
Q  142 aacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaat-aagttttgtttcgaagaaaactattatttt-ttatcatttataattata 239  Q
    ||||||||| | |||||||||| || |||||   ||||| |||||||||| || |||| ||| ||| |||  ||||||||| ||||||||||||||||||    
T  33493951 aacatatttgagtgtatcggtagacaaaacccttaaattaatagttaaatgaattttttttttgaaaaaatatattatttttttatcatttataattata 33494050  T
Q  240 atgattaaat 249  Q
     |||| ||||    
T  33494051 gtgatcaaat 33494060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 501
Target Start/End: Complemental strand, 35895413 - 35895324
Alignment:
Q  413 gacaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||| ||||||||| |||||||  || ||||||||||||| | ||| |||  | |||||||||||||||  | |||||||||||||    
T  35895413 gacaaatagttatttattacataaaaaatggtcgttaatttataaaattatgaagcaggagtaccggtacacctcactttatgagtgtac 35895324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 36489450 - 36489491
Alignment:
Q  214 attattttttatcatttataattataatgattaaattttatt 255  Q
    |||||||| |||||| |||||||||||| |||||||||||||    
T  36489450 attattttctatcatctataattataataattaaattttatt 36489491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 70; Significance: 4e-31; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 45376 - 45465
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta 500  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||| |||||||    
T  45376 ccgacaaataactatttatttcataaaattgatcgttaatttatagatttagtaagtaagagtaccggtacaccataatttacgagtgta 45465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 124 - 321
Target Start/End: Original strand, 45110 - 45308
Alignment:
Q  124 aaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactatta--tttt 221  Q
    ||||| || |||||||| ||||||| | | |||| | ||| ||||||||| ||||||||||||||||| |||| | ||| |||||||| |||||  ||||    
T  45110 aaattctaccgtacacccaacatatatgagtgtaccagtacaccaaaccttaaaatttatagttaaatgagttgttttttgaagaaaaatattatttttt 45209  T
Q  222 ttatcatttataattataatgattaaattttattcacnnnnnnnttaaccaaataaaattgaatttttatcgttcataatagagaactttgattatttta 321  Q
    ||||||||||| ||||||||||||||||||||||||        | ||| ||||||||||||| |||| |||   |||||||||||||||||||| ||||    
T  45210 ttatcatttatgattataatgattaaattttattca-gcaaaagtcaacgaaataaaattgaaattttttcgcatataatagagaactttgattaattta 45308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 6e-30; HSPs: 127)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 25082143 - 25082020
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttata 233  Q
    ||||||||||||||||| | |||| ||||| ||||| |||  || ||||||| ||||| |||| | ||| ||||||||||||||||||||||||||||||    
T  25082143 gtacacctaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgagttattttttgaagaaaactattattttttatcatttata 25082044  T
Q  234 attataatgattaaattttattca 257  Q
    |||||||||||||||| |||||||    
T  25082043 attataatgattaaatcttattca 25082020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 25081861 - 25081771
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||| |||||||  |||||| ||||||||    
T  25081861 ccgacaaataattatttatttcataaaattgatcgttagtttatagatttatgaaacaagagtaccagtacacctcaatttacgagtgtac 25081771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 176 - 340
Target Start/End: Original strand, 45809498 - 45809673
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgatt-aaattttattca-cnnnnnnnttaaccaa 273  Q
    |||||||||||||||| |||| | ||| |||||||| ||||||||||||||||||||||||||||||||| |||| ||||||| |       | ||| ||    
T  45809498 aaatttatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataatgattaaaatcttattcaccaaaagcatcaacgaa 45809597  T
Q  274 ataaaattg---------aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
     ||||||||         ||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  45809598 ttaaaattgattttttttaatttttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaa 45809673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 123 - 340
Target Start/End: Original strand, 17525438 - 17525667
Alignment:
Q  123 caaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttt 222  Q
    |||||| || ||||||||  |||||||| | |||| ||||| | ||||||   |||||||||||||||| |||| | ||| |||||||| ||||||||||    
T  17525438 caaattctaccgtacacccgacatatttgagtgtaccggtacatcaaacccttaaatttatagttaaatgagttattttttgaagaaaaatattattttt 17525537  T
Q  223 tatcatttataattataatgattaaatt-ttattcacnnnnnnntt-aaccaaataaaattga----------atttttatcgttcataatagagaactt 310  Q
    |||||||||||||||||||||||||| | ||||||||        | ||| || |||||||||          |||||||||| | ||||||||||||||    
T  17525538 tatcatttataattataatgattaaaatcttattcaccaaaagcatcaacgaattaaaattgatttttttttaatttttatcgctaataatagagaactt 17525637  T
Q  311 tgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||||| |||||||||| |||||    
T  17525638 tgattattttatacgataatatgtaaaaaa 17525667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 48796192 - 48796265
Alignment:
Q  272 aaataaaattgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  48796192 aaataaaattgaatttttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaattac 48796265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 44382422 - 44382297
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||||||| ||||||| ||||||||| | |||| ||||| |||| |||   |||||||||||||||| | || | ||| |||||||| |||| ||||    
T  44382422 gcaaattttatggtacacccaacatatttgagtgtaccggtacaccagacccttaaatttatagttaaatgaattatttttagaagaaaaatatt-tttt 44382324  T
Q  222 ttatcatttataattataatgattaaa 248  Q
    |||||||||||||||||||||||||||    
T  44382323 ttatcatttataattataatgattaaa 44382297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 411 - 515
Target Start/End: Complemental strand, 42958944 - 42958839
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  ||||||||||||||| |  |||||| ||||||| ||||||| |    
T  42958944 ccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacatctcaatttacgagtgtatcatagaaat 42958845  T
Q  510 tccctt 515  Q
    ||||||    
T  42958844 tccctt 42958839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 412 - 501
Target Start/End: Complemental strand, 44382119 - 44382030
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||| | ||||||||||||||||||| ||||||  ||| |||||||||| | ||||||||||||||| ||||||||||||||||    
T  44382119 cgacaaataactttttatttcataaaattgattgttaatgcataaatttaggaaacatgagtaccggtacaccttaatttatgagtgtac 44382030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 411 - 510
Target Start/End: Original strand, 17525740 - 17525840
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||| |||||||||  | |||||||| |||||| |||||||||| |||| |||||||||    
T  17525740 ccgacaaataactatttatttcataaaattgattgttaatgtataaatttaggaagcaggagtaccgatacaccttaatttatgaatgtaccatagaagt 17525839  T
Q  510 t 510  Q
    |    
T  17525840 t 17525840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 272 - 344
Target Start/End: Complemental strand, 24245725 - 24245653
Alignment:
Q  272 aaataaaattgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaattta 344  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||| |||||||||| |||||||||    
T  24245725 aaataaaattgaatttttatcgctcataatggaaaactttgattattttatacgataatatgtaaaaaattta 24245653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 412 - 515
Target Start/End: Complemental strand, 34100815 - 34100711
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  || ||||||||||||||  ||||||  |||||| ||||||||||    
T  34100815 cgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaatagtaccggtacacctcaatttacaagtgtaccatagaagtt 34100716  T
Q  511 ccctt 515  Q
    |||||    
T  34100715 ccctt 34100711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 414 - 501
Target Start/End: Original strand, 24511885 - 24511972
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||| |||||||||||||||||||||||||| |||||| ||||| |||  |||||||||||||||||  |||||| ||||||||    
T  24511885 acaaataactatttatttcataaaattgatcgttagtttataaatttatgaagcaagagtaccggtacacctcaatttacgagtgtac 24511972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 38260803 - 38260938
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||| |||| |||||| | |||| ||||| ||| |  ||  ||||| ||||||||||||||| | ||| |||||||| |||||||||    
T  38260803 gcaaattctatggtacatctaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttgttttttgaagaaaaatattatttt 38260902  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | ||||| |||||||    
T  38260903 ttatcatttataattataataactaaatcttattca 38260938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 51056198 - 51056332
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| |||||||||| |||||| | |||| ||||| ||||  | | ||| || ||||||||||||||| | ||| |||||||| |||||||||    
T  51056198 gcaaattctatggtacacctaatatatttgagtgtaccggtacaccactctttaaa-ttaatagttaaataagttattttttgaagaaaaatattatttt 51056296  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | ||||| |||||||    
T  51056297 ttatcatttataattataataactaaatcttattca 51056332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 257
Target Start/End: Original strand, 52180235 - 52180370
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||||||| ||||| |||| |||||| | |||| ||||| ||| |   |  ||||| ||||||||||||||| | ||| |||||||| |||||||||    
T  52180235 gcaaattttatggtacatctaatatatttgagtgtaccggtacacccactatttaaattaatagttaaataagttgttttttgaagaaaaatattatttt 52180334  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | ||||| |||||||    
T  52180335 ttatcatttataattataataactaaatcttattca 52180370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 415 - 501
Target Start/End: Original strand, 12178906 - 12178992
Alignment:
Q  415 caaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||  |||||  ||||||||    
T  12178906 caaataactatttatttcataaaattaatcgttaatttatagatttaggaagcaagagtaccggtacacctcaatttgcgagtgtac 12178992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 45809748 - 45809838
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||| |||||||||  | |||||||| |||| | ||||||||||||||||    
T  45809748 ccgacaaataactatttatttcataaaattgattgttaatgtataaatttaggaagcatgagtaccgatacatcttaatttatgagtgtac 45809838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 30547782 - 30547839
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  30547782 aatttttatcgttcataatagagaactttgattattttatacgataatatgtaaaaaa 30547839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 412 - 501
Target Start/End: Original strand, 30547914 - 30548003
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||| |||||||||||||||||||||||||| |||||| ||||| |||  ||||||||| |||||||  |||||| ||||||||    
T  30547914 cgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtacctgtacacctcaatttacgagtgtac 30548003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 35874290 - 35874209
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  35874290 aaattaatagttaaataagttgttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 35874209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 411 - 500
Target Start/End: Complemental strand, 46707447 - 46707358
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta 500  Q
    ||||||||||| | ||||||||||||||||||| ||||||  ||| |||||||||  | ||||||||||||||| |||||||||||||||    
T  46707447 ccgacaaataactttttatttcataaaattgattgttaatgcataaatttaggaagcaggagtaccggtacaccttaatttatgagtgta 46707358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 24230976 - 24230842
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||| | || |||||| | |||||||||| ||| | | |  ||||| ||||||||||||||| | ||| |||||||| |||||||||    
T  24230976 gcaaattctatggtacatccaatatatttgagtgtatcggtacacccaccattcaaattaatagttaaataagttgttttt-gaagaaaaatattatttt 24230878  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | |||||| ||||||    
T  24230877 ttatcatttataattataataactaaattgtattca 24230842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 411 - 513
Target Start/End: Complemental strand, 32144772 - 32144669
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| ||||||||||||||| ||||| |||||| |||| |||| ||||  | || ||||| |||||| ||||||||||||||| |||||||||    
T  32144772 ccgacaaataactatttatttcataaagttgattgttaatatataaattttggaagcaggaataccgatacaccttaatttatgagtgtaccatagaagt 32144673  T
Q  510 tccc 513  Q
    ||||    
T  32144672 tccc 32144669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 124 - 345
Target Start/End: Complemental strand, 34101109 - 34100883
Alignment:
Q  124 aaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttttt 223  Q
    ||||| || |||||||| ||||||||| | |||| ||||| | ||| | |  || ||||||| ||| | |||| | ||| |||||||| |||||||||||    
T  34101109 aaattctaccgtacacccaacatatttgagtgtaccggtacatcaatcttttaattttataggtaattgagttgttttttgaagaaaaatattatttttt 34101010  T
Q  224 -atcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattg---aatttttatcgttcataatagagaactttgattatt 318  Q
     || ||||||||||||||||||||||| ||||||| |       | ||| |||||   ||    ||||||||||| ||||||||||||||||||||||||    
T  34101009 tatgatttataattataatgattaaatcttattcatcaaaattgtaaacgaaatattttttttaaatttttatcgctcataatagagaactttgattatt 34100910  T
Q  319 ttatatgataatatgttaaaaatttac 345  Q
    ||||| |||||||||| ||||| ||||    
T  34100909 ttatacgataatatgtaaaaaaattac 34100883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 122 - 334
Target Start/End: Complemental strand, 51610929 - 51610719
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||||||||| ||||||||||| | |||| ||||| ||||| |||  || |||||||        ||| | ||| |||||||| |||||||||    
T  51610929 gcaaattctatcgtacatctaacatatttgagtgtaccggtacaccaatcctttaattttatag--------gttgtttttagaagaaaaatattatttt 51610838  T
Q  222 tt-atcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattg----aatttttatcgttcataatagagaactttgatt 315  Q
    || |||||||||||||||||||||||||| ||||||| |       | ||| ||||||  ||     ||||||||||| |||||||||||||||||||||    
T  51610837 tttatcatttataattataatgattaaatcttattcatcaaaaatgtaaacgaaataatttttttttaatttttatcgctcataatagagaactttgatt 51610738  T
Q  316 attttatatgataatatgt 334  Q
    |||||||| ||||||||||    
T  51610737 attttatacgataatatgt 51610719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 134 - 345
Target Start/End: Original strand, 12178619 - 12178834
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagtt-aaataagtt-ttgtttcgaagaaaactattattttttatcattta 231  Q
    ||||||| || |||||| | || ||||||| | |||||||  |||||||||||| |||| |||| || ||| ||| |||| |||||||||| ||||||||    
T  12178619 gtacacccaatatatttgagtgcatcggtacatcaaacctttaaatttatagtttaaatgagttgtttttttgaaaaaaaatattatttttgatcattta 12178718  T
Q  232 taattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattgaatttttat-cgttcataatagagaactttgattattttatatgataa 329  Q
    |||||||||| ||||||| ||||||| |       | ||| |||||||||||| ||||| |   ||  ||||||| |||||| |||||||||||||||||    
T  12178719 taattataattattaaatcttattcaccaaaaacgtcaacgaaataaaattgattttttttgaatttttaatagaaaactttaattattttatatgataa 12178818  T
Q  330 tatgttaaaaatttac 345  Q
    ||||  ||||||||||    
T  12178819 tatggcaaaaatttac 12178834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 42959165 - 42959000
Alignment:
Q  179 tttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca-cnnnnnnnttaaccaaataa 277  Q
    ||||||| ||||| |||| | ||  ||| |||| ||||||||||||||||||| ||||||||||||||||| ||||||| |       | ||| ||||||    
T  42959165 tttataggtaaatgagttgttttctgaaaaaaaatattattttttatcatttaaaattataatgattaaatcttattcatcaaaagtgtaaacaaaataa 42959066  T
Q  278 aattg---aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
      ||    ||||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||    
T  42959065 ttttttaaaatttttatcactcataatagagaactttgattattttatacgataatatgtaaaaaa 42959000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 31821934 - 31821853
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  31821934 aaattcatagttaaatgagttattttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 31821853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 412 - 501
Target Start/End: Original strand, 48796333 - 48796422
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||| |||   |||||||||||||||||  | |||| ||||||||    
T  48796333 cgacaaataactatttatttcataaaattgatcattaatttatagatttgggatggaagagtaccggtacacctcattttacgagtgtac 48796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 32144903 - 32144843
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||    
T  32144903 ttgaatttttatcgctcataatagagaactttgattattttatacgaaaatatgtaaaaaa 32144843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 46707582 - 46707522
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||| |||||||||| |||||||||||||||||| |||||||||| |||||    
T  46707582 ttgaatttttatcgctcataatagaaaactttgattattttatacgataatatgtaaaaaa 46707522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 30547670 - 30547749
Alignment:
Q  179 tttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||||| ||||| |||| || ||| |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  30547670 tttataggtaaatgagttgtttttttgaagaaaaatattaatttttatcatttataattataatgattaaatcttattca 30547749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 32145074 - 32144947
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| || |||||||| ||||| ||| | |||| ||||| | |||| |   |||||||||||||||| |||| | ||| |||||||  |||||||||    
T  32145074 gcaaattctaccgtacacccaacatttttgagtgtaccggtacatcaaatccttaaatttatagttaaatgagttattttttgaagaaatatattatttt 32144975  T
Q  222 tt-atcatttataattataatgattaaa 248  Q
    || |||||||||||||||||||||||||    
T  32144974 tttatcatttataattataatgattaaa 32144947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 411 - 513
Target Start/End: Complemental strand, 51610639 - 51610536
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||| ||||| |||  |||||||||| ||||||  |||||| || |||| | |||||||    
T  51610639 ccgacaaataactatttatttcataaaattgattgttagtttataaatttatgaagcaagagtaccgatacacctcaatttacgaatgtaccgtagaagt 51610540  T
Q  510 tccc 513  Q
    ||||    
T  51610539 tccc 51610536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 44263701 - 44263783
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| || ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  44263701 aaattaatagttaaatgagttgtttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 44263783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 24511759 - 24511824
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    |||||||||||||| | ||||||||||||||||||||||||||| |||||||| | ||||| ||||    
T  24511759 ttgaatttttatcgcttataatagagaactttgattattttatacgataatatctaaaaaaattac 24511824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 512
Target Start/End: Complemental strand, 41550249 - 41550148
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| | |||||||||||||| | ||||||||||||||  ||| | |||| |||||||||||||||| | ||||| |||||||| ||||||||||    
T  41550249 gacaaataactttttatttcataaaaataatcgttaatttataagttttgtgaaacaagagtaccggtacactaaaatttctgagtgtaccatagaagtt 41550150  T
Q  511 cc 512  Q
    ||    
T  41550149 cc 41550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 414 - 514
Target Start/End: Original strand, 51184345 - 51184446
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttcc 512  Q
    |||||||| | |||||||||||||| |||| ||||||||||| ||||  ||| |||||||||||| ||||| ||| || || ||||| ||||||||||||    
T  51184345 acaaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggcacaccttaaattgtgggtgtaccatagaagttcc 51184444  T
Q  513 ct 514  Q
    ||    
T  51184445 ct 51184446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 425 - 497
Target Start/End: Original strand, 2665512 - 2665584
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagt 497  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||||| |  |||||||| |||||| |||||    
T  2665512 tttatttcataaaaatgatcgttaatttatatattttggaagtaagagcattggtacaccttaatttgtgagt 2665584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 413 - 519
Target Start/End: Complemental strand, 33771748 - 33771640
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| | |||||||||||||| ||||||||||||||||  ||| | |||| ||||||||| |||||| | ||| | |||||||| | ||||||||    
T  33771748 gacaaataactttttatttcataaaaatgatcgttaatttataagttttgtgaaacaagagtaccagtacactaaaatctctgagtgtatcgtagaagtt 33771649  T
Q  511 cccttaaaa 519  Q
    |||||||||    
T  33771648 cccttaaaa 33771640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 416 - 523
Target Start/End: Complemental strand, 50239375 - 50239267
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    ||||| || |||||||||||||| |||| ||||||||||| ||||  ||| |||||||||||||||||| ||||||  | ||||| | ||||||||||||    
T  50239375 aaatatttttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagttccct 50239276  T
Q  515 taaaacaat 523  Q
      |||||||    
T  50239275 ataaacaat 50239267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 52441414 - 52441346
Alignment:
Q  189 aataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| | ||| || ||||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  52441414 aataagttgttttttgaggaaaaatattattttttgtcatttataattataataattaaattttattca 52441346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 257
Target Start/End: Original strand, 24511601 - 24511724
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttata 233  Q
    ||||||| ||||||||| | |||| ||||| |||||| ||  || ||||||| ||||| |||| | ||  |||||||| | || |||||| | |||||||    
T  24511601 gtacacccaacatatttgagtgtaccggtacaccaaatctttaattttataggtaaatgagttgttttatgaagaaaaatgtttttttttcttatttata 24511700  T
Q  234 attataatgattaaattttattca 257  Q
    |||||||||||||||| |||||||    
T  24511701 attataatgattaaatcttattca 24511724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 2684285 - 2684375
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || ||||||||||| |||||||||||||    
T  2684285 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattatgagtgtaccatagaagttccc 2684375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 482
Target Start/End: Complemental strand, 17644490 - 17644423
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtaca 482  Q
    ||||||||| ||||||||| || ||  |||||||||||||||||||||| ||||||||||||||| ||||    
T  17644490 gacaaataactatttattttatgaa--tgatcgttaatttatatatttatgaaataagagtaccgataca 17644423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 24003772 - 24003690
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||||||||| |||||||||||||||||| | ||||| |||||||    
T  24003772 aaattcatagttaaatgagttgttttttgaagaaaaatattatttttttatcatttataattataataactaaatcttattca 24003690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 24381371 - 24381453
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| || ||| |||||||| |||| |||||||||| ||||||||||||| | |||||||||||||    
T  24381371 aaattaatagttaaatgagttatttttttgaagaaaaatattgttttttatcacttataattataataactaaattttattca 24381453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 45622836 - 45622754
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatt-ttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| ||||||| |||| ||||||||||||||||| | ||||| |||||||    
T  45622836 aaattcatagttaaataagttattttttgaagaaaaatattatttttttgtcatttataattataataactaaatcttattca 45622754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 414 - 483
Target Start/End: Original strand, 7122261 - 7122330
Alignment:
Q  414 acaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacac 483  Q
    |||||||| | |||||||||||||| |||| ||||||||||| ||||  ||| |||||||||||||||||    
T  7122261 acaaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacac 7122330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 34038516 - 34038435
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||||||||||||||| |||| ||||||| | ||||| |||||||    
T  34038516 aaattaatagttaaatgagttgttttttgaagaaaaatattattttttatcatctatacttataataactaaatcttattca 34038435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 44382238 - 44382193
Alignment:
Q  295 tcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  44382238 tcataatagagaactttgattattttatacgataatatgtaaaaaa 44382193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 416 - 515
Target Start/End: Complemental strand, 52345698 - 52345597
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    ||||| |||||||||||| ||||  |||||||||||||||| | ||| |||| |||||||||||||||||  | ||| |||||||| | |||||||||||    
T  52345698 aaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaaacaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 52345599  T
Q  514 tt 515  Q
    ||    
T  52345598 tt 52345597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 10061474 - 10061566
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||||    
T  10061474 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccctt 10061566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 14131442 - 14131350
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| |||||||||||||||| |||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||||    
T  14131442 tttatttcattaaagtgatcgttaatttataaattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccctt 14131350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 14191211 - 14191303
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac-atagaagttccctt 515  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| |||||||| |||||||   || |||||||||||| ||||||||||||||    
T  14191211 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtacgggtacactcaaaattatgagtgtactatagaagttccctt 14191303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 501
Target Start/End: Original strand, 21883122 - 21883205
Alignment:
Q  420 aattatttatttcataaaat--tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||||||||||||   | |||||||||||||| | ||| ||| ||||||||||||||||||  ||||||| |||||||    
T  21883122 aattatttatttcataaaaaaataatcgttaatttataaaattatgaagtaagagtaccggtacacctcaatttataagtgtac 21883205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 26308608 - 26308495
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||||||||||| ||||||||| | |||| ||||| |||||||    ||||||||| |||||| |||| | ||| ||| |||| |||  ||||    
T  26308608 gcaaattctatcgtacacccaacatatttgagtgtaccggtacaccaaactcttaaatttataattaaatgagttgttttttgaataaaaatat--tttt 26308511  T
Q  222 ttatcatttataatta 237  Q
    ||||||||||||||||    
T  26308510 ttatcatttataatta 26308495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 29171482 - 29171574
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac-atagaagttccctt 515  Q
    |||||||||| ||| |||||||||||||||| |||| | |||| ||||||||||||||||   || || ||||||||| ||||||||||||||    
T  29171482 tttatttcattaaagtgatcgttaatttataaattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtacgatagaagttccctt 29171574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 30263934 - 30263851
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt--atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||||||||||  || ||||||||||||||| ||||||| |||||||    
T  30263934 aaattaatagttaaatgagttgttttttgaagaaaaatattattttttttataatttataattataataattaaatcttattca 30263851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 30321237 - 30321161
Alignment:
Q  182 atagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    |||||||||| |||| | ||| |||||||| ||||||||||| |||||||||||||||||| | ||||| |||||||    
T  30321237 atagttaaatgagttgttttttgaagaaaaatattatttttttatcatttataattataataactaaatcttattca 30321161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 39853276 - 39853368
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| ||| ||||||||||| | |||| ||||||||||||||||   || ||||||||||| |||||||||||||||    
T  39853276 tttatttcattaaagtgatctttattttatatattttgtgaaacaagagtaccggtacactcaaaattatgagtgtaccatagaagttccctt 39853368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 40850338 - 40850430
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| |||| |||||||||||   || || |||||||| |||||||||||||||    
T  40850338 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagaataccggtacactcaaaattgtgagtgtaccatagaagttccctt 40850430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 42275688 - 42275608
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttatt 255  Q
    ||||| |||||||||| |||| || |||  ||||||| |||||||||||||||| |||||||||||| ||||||| |||||    
T  42275688 aaattaatagttaaatgagttgtttttttaaagaaaaatattattttttatcatctataattataataattaaatcttatt 42275608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 46362125 - 46362053
Alignment:
Q  413 gacaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    |||||||| |||||||||||||||||  |||||||||||||||| | ||| |||| ||| |||||||||||||    
T  46362125 gacaaatagttatttatttcataaaaaatgatcgttaatttataaaattacgaaaaaagggtaccggtacacc 46362053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 413 - 515
Target Start/End: Complemental strand, 49289331 - 49289227
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||| || |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| ||||||| ||    
T  49289331 gacaaatacttttttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaaatt 49289232  T
Q  511 ccctt 515  Q
    |||||    
T  49289231 ccctt 49289227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 12907334 - 12907417
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| || ||| |||||||| ||||||||| |||||||||||||||||||| | ||||| |||||||    
T  12907334 aaattcatagttaaatgagttgtttttttgaagaaaaatattatttttttatcatttataattataataactaaatcttattca 12907417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 413 - 483
Target Start/End: Original strand, 27038848 - 27038919
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||| || |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||    
T  27038848 gacaaatacttttttatttcattaaagtgatctttaatttatatattttgtgaaagaagagtaccggtacac 27038919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 425 - 484
Target Start/End: Complemental strand, 41541567 - 41541508
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    |||||||||||||| |||||||||||| ||| ||||| |||  |||||||||||||||||    
T  41541567 tttatttcataaaaatgatcgttaattcataaatttatgaagcaagagtaccggtacacc 41541508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 411 - 454
Target Start/End: Complemental strand, 52365686 - 52365643
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttat 454  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  52365686 ccgacaaataactatttatttcataaaattgatcgttagtttat 52365643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 482
Target Start/End: Complemental strand, 9259906 - 9259848
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtaca 482  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| |||||||||||||||    
T  9259906 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccggtaca 9259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 513
Target Start/End: Original strand, 20280526 - 20280628
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| | |||||||||||||| |||| |||||||||||  ||| | |||| |||||||||||||||| | ||||| | |||||| | ||||||||    
T  20280526 gacaaataactttttatttcataaaaatgattgttaatttataagttttgtgaaacaagagtaccggtacactaaaatttcttagtgtaccgtagaagtt 20280625  T
Q  511 ccc 513  Q
    |||    
T  20280626 ccc 20280628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 513
Target Start/End: Complemental strand, 25702537 - 25702435
Alignment:
Q  413 gacaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||| |||||||||| | ||||  |||||||| ||||||| | ||| |||  |||||||||||||||||  |||||||||||||| | ||||||||    
T  25702537 gacaaatagttatttattttacaaaaaatgatcgttgatttataaaattatgaagcaagagtaccggtacacctcaatttatgagtgtaccgtagaagtt 25702438  T
Q  511 ccc 513  Q
    |||    
T  25702437 ccc 25702435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 482
Target Start/End: Original strand, 27802129 - 27802187
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtaca 482  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| |||||||||||||||    
T  27802129 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccggtaca 27802187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 31075962 - 31075880
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||| |||||| |||| || ||| |||||||| ||||||||||||| ||||||||||||||| | ||||| |||||||    
T  31075962 aaattaataattaaatgagttatttttttgaagaaaaatattattttttattatttataattataataactaaatcttattca 31075880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 517
Target Start/End: Complemental strand, 48868152 - 48868058
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaa 517  Q
    |||||||||| ||| |||| |||||||||||||||| |  ||| ||||||||||||||||   || || |||||||| |||||||||||||||||    
T  48868152 tttatttcattaaagtgattgttaatttatatattttgtaaaacaagagtaccggtacactcaaaattgtgagtgtatcatagaagttcccttaa 48868058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 48977228 - 48977146
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactat-tattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| ||| | ||||||||||||||||||||| || | ||||| |||||||    
T  48977228 aaattaatagttaaataagttgttttttgaagaaaaatatattttttttatcatttataattatgataactaaatcttattca 48977146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 513
Target Start/End: Original strand, 49739435 - 49739537
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac-atagaagtt 510  Q
    ||||||||| | ||||||| |||||| ||||||||||||||||  ||| | |||| |||||||||||||||| | ||||| ||| |||||  ||||||||    
T  49739435 gacaaataaatttttattttataaaaatgatcgttaatttataagttttgtgaaacaagagtaccggtacactacaatttttgaatgtactgtagaagtt 49739534  T
Q  511 ccc 513  Q
    |||    
T  49739535 ccc 49739537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 51787820 - 51787754
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataat 241  Q
    ||||| |||||||||| |||| | ||| |||||||| ||||||||||| ||||||||||||||||||    
T  51787820 aaattaatagttaaatgagttgttttttgaagaaaaatattatttttttatcatttataattataat 51787754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 13203235 - 13203186
Alignment:
Q  208 aaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  13203235 aaaaatattattttttatcatttataattataataactaaatcttattca 13203186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 502
Target Start/End: Original strand, 23304724 - 23304801
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtaca 502  Q
    |||||||||||||| | || ||||||||||| ||||  ||| |||||||||||||||| | ||||||| | |||||||    
T  23304724 tttatttcataaaaataatagttaatttataaatttttgaagtaagagtaccggtacatcttaatttacgggtgtaca 23304801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 26307776 - 26307719
Alignment:
Q  284 atttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaat 341  Q
    |||||||||  ||||||||||||| ||| ||||||||||| |||||||||| ||||||    
T  26307776 atttttatcactcataatagagaaatttaattattttatacgataatatgtaaaaaat 26307719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 30896868 - 30896940
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaat 249  Q
    ||||| ||||||||||||||| | |||  || |||| |||||||||||||| |||||||||||||| |||||||    
T  30896868 aaattaatagttaaataagttgtttttaaaaaaaaa-tattattttttatcttttataattataataattaaat 30896940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 512
Target Start/End: Complemental strand, 31571061 - 31570972
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcc 512  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| ||||||||||||    
T  31571061 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttcc 31570972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 32017123 - 32017058
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    ||||| |||||||||||| || ||||| ||| |||| ||||| ||| |||||||||||||||||||    
T  32017123 aaattaatagttaaataaattatgtttagaataaaaatattactttctatcatttataattataat 32017058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 3399323 - 3399383
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| ||||||||||| || |||||||||| |||||    
T  3399323 ttgaatttttatcactcataattgagaacattgattattttttacgataatatgtaaaaaa 3399383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 413 - 501
Target Start/End: Complemental strand, 24245583 - 24245495
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaat--aagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||| ||||||||| |||||||||||| |||||||||| ||||  |||||  |||||||||| ||||||  | |||| ||||||||    
T  24245583 gacaaataactatttatttaataaaattgatcattaatttatagattt--gaaatggaagagtaccgatacacctcattttacgagtgtac 24245495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 413 - 515
Target Start/End: Complemental strand, 33234156 - 33234052
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| | |||||||||||||| ||||||||||||||||  ||| | |||| || ||||| ||||||| | ||||| ||| |||| | ||||||||    
T  33234156 gacaaataactttttatttcataaaaatgatcgttaatttataagttttgtgaaacaaaagtactggtacactaaaatttctgaatgtaccgtagaagtt 33234057  T
Q  511 ccctt 515  Q
    |||||    
T  33234056 ccctt 33234052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 33828954 - 33828862
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| ||||||||||||||| |  ||| ||||||||||||||||   || || |||||||| |||||||||||||||    
T  33828954 tttatttcattaaagtgatctttaatttatatattttgtaaaacaagagtaccggtacacttaaaattgtgagtgtaccatagaagttccctt 33828862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 425 - 515
Target Start/End: Original strand, 33839012 - 33839104
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccctt 515  Q
    |||||||||| ||| ||||| ||||||||||||||| |  ||| ||||||||||||||||   || || |||||||| |||||||||||||||    
T  33839012 tttatttcattaaagtgatctttaatttatatattttgtaaaacaagagtaccggtacacttaaaattgtgagtgtaccatagaagttccctt 33839104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 501
Target Start/End: Complemental strand, 34038262 - 34038174
Alignment:
Q  414 acaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||| ||||||||||||||||  |||||||||||||||| | ||| |||  | |||||||||||||||  | ||| |||||||||    
T  34038262 acaaataactatttatttcataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtac 34038174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 34038401 - 34038341
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||| ||  ||||||| |||||| ||||||||||| ||||||||||||| |||||    
T  34038401 ttgaatttttttcactcataattgagaacattgattattttttatgataatatgtaaaaaa 34038341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 501
Target Start/End: Complemental strand, 42275436 - 42275348
Alignment:
Q  414 acaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||| ||||||||||||||||  |||||||||||||||| | ||| |||  | |||||||||||||||  | ||| |||||||||    
T  42275436 acaaataactatttatttcataaaaaatgatcgttaatttataaaattatgaagcatgagtaccggtacacctcactttctgagtgtac 42275348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 42275572 - 42275512
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||| ||  ||||||| |||||| ||||||||||| ||||||||||||| |||||    
T  42275572 ttgaatttttttcactcataattgagaacattgattattttttatgataatatgtaaaaaa 42275512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 426 - 482
Target Start/End: Original strand, 46918701 - 46918756
Alignment:
Q  426 ttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtaca 482  Q
    |||||||||||||| ||||||||||||||| ||||| |||  |||||||||||||||    
T  46918701 ttatttcataaaat-gatcgttaatttataaatttatgaagcaagagtaccggtaca 46918756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 52365791 - 52365743
Alignment:
Q  297 ataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||||||||||||||||||| |||||||| | ||||| ||||    
T  52365791 ataatagagaactttgattattttatacgataatatctaaaaaaattac 52365743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 52441315 - 52441255
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  52441315 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 52441255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 477840 - 477705
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||||| || |||||| | |||||||||| ||  |  ||  ||||| || ||||||| |||| | ||| |||||||| |||||||||    
T  477840 gcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgagttgttttttgaagaaaaatattatttt 477741  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
     ||||||||||| || |||| | ||||| |||||||    
T  477740 ctatcatttatatttgtaataactaaatcttattca 477705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 514
Target Start/End: Complemental strand, 3150275 - 3150184
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| |||||||||| |||||   || || |||||||| ||||||||||||||    
T  3150275 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccgatacactcaaaattgtgagtgtaccatagaagttccct 3150184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 255
Target Start/End: Original strand, 5800010 - 5800049
Alignment:
Q  216 tattttttatcatttataattataatgattaaattttatt 255  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  5800010 tattttttatcatttataattataataattatattttatt 5800049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 6329560 - 6329521
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  6329560 ttttttatcatttataattataataactaaattttattca 6329521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 8396446 - 8396485
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  8396446 ttttttatcatttataattataataactaaattttattca 8396485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 10348378 - 10348295
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactat-tatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| ||| |||||||| |||||||||||||||||| | ||||| |||||||    
T  10348378 aaattcatagttaaatgagttgttttttgaagaaaaatatatatttttttatcatttataattataataactaaatcttattca 10348295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 514
Target Start/End: Complemental strand, 12105262 - 12105159
Alignment:
Q  413 gacaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| |||||||| |||||||  | |||||||||||||| | ||| |||  |||||||||||||||||  | ||| |||||||| | ||||||||    
T  12105262 gacaaataactatttattacataaaaaattatcgttaatttataaaattatgaagcaagagtaccggtacacctcattttgtgagtgtaccgtagaagtt 12105163  T
Q  511 ccct 514  Q
    ||||    
T  12105162 ccct 12105159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Original strand, 17376672 - 17376731
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| |||||||| |||||||    
T  17376672 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtactggtacac 17376731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 460
Target Start/End: Original strand, 22821553 - 22821600
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatattt 460  Q
    ||||||||||| |||||||||||||| | |||||||||||||| ||||    
T  22821553 gacaaataattttttatttcataaaaataatcgttaatttataaattt 22821600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 32912312 - 32912242
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    ||||||||  |||||||||| |||||| ||||||||||||||| ||||| ||| | ||||||||| ||||||    
T  32912312 gacaaatagctatttatttcttaaaat-gatcgttaatttataaatttatgaagtgagagtaccgatacacc 32912242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 41321322 - 41321413
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| |||||||||  |||||   || || |||||||| ||||||||||||||    
T  41321322 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccaatacactcaaaattgtgagtgtaccatagaagttccct 41321413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 518
Target Start/End: Complemental strand, 43224735 - 43224640
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatata-tttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaaa 518  Q
    |||||||||| ||| ||||| |||||||||||| |||  |||| ||||||||||||||||   || || |||||||| ||||||||||||| ||||    
T  43224735 tttatttcattaaagtgatctttaatttatatattttttgaaaaaagagtaccggtacactcaaaattgtgagtgtaccatagaagttcccataaa 43224640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 44647335 - 44647276
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||    
T  44647335 tttatttcattaaaatgatctttaatttatatattttgtgaaacaagagtaccggtacac 44647276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 48977112 - 48977053
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaa 339  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| ||||    
T  48977112 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaa 48977053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 2249899 - 2249857
Alignment:
Q  215 ttattttttatcatttataattataatgattaaattttattca 257  Q
    ||||||||||||||||||||||||||| | ||||| |||||||    
T  2249899 ttattttttatcatttataattataataactaaatcttattca 2249857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 425 - 513
Target Start/End: Complemental strand, 7426750 - 7426660
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||  ||||||||||||||| | |||| ||||||||||||||||   || ||||||||||| | |||||||||||    
T  7426750 tttatttcattaaagtgatatttaatttatatattttgtgaaagaagagtaccggtacactcaaaattatgagtgtaccgtagaagttccc 7426660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 413 - 513
Target Start/End: Complemental strand, 13203038 - 13202936
Alignment:
Q  413 gacaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtaca-tagaagtt 510  Q
    ||||||||| |||||| | |||||||  |||||||| ||||||| | ||| |||| | |||||||||||||||  | ||| |||||||||| ||||||||    
T  13203038 gacaaataactatttactacataaaaaatgatcgttcatttataaaattaagaaacaggagtaccggtacacctcattttctgagtgtacagtagaagtt 13202939  T
Q  511 ccc 513  Q
    |||    
T  13202938 ccc 13202936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 21072829 - 21072891
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaact-attattttttatcatttataatta 237  Q
    ||||| ||||||||||||||| | ||| |||||||| | ||| ||||||||||||||||||||    
T  21072829 aaattaatagttaaataagttattttttgaagaaaaataatttttttttatcatttataatta 21072891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 25081990 - 25081928
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||| ||||| |||||||| | |||||||||||||||||| |||| ||||| ||||| ||||    
T  25081990 aatttgtatcgctcataataaataactttgattattttatacgatagtatgtaaaaaaattac 25081928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 412 - 454
Target Start/End: Complemental strand, 29852291 - 29852249
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttat 454  Q
    |||||||||| |||||||||||||||| |||| ||||||||||    
T  29852291 cgacaaataactatttatttcataaaaatgattgttaatttat 29852249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 423 - 519
Target Start/End: Original strand, 44263971 - 44264069
Alignment:
Q  423 tatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaaaa 519  Q
    |||||||| |||||||  |||||||||||||||| | ||| |||| | |||||||||||||||  | ||| |||||||| | |||| ||||||||||||    
T  44263971 tatttattacataaaaaatgatcgttaatttataaaattatgaaacaggagtaccggtacacctcactttgtgagtgtaccgtagatgttcccttaaaa 44264069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 46707656 - 46707626
Alignment:
Q  218 ttttttatcatttataattataatgattaaa 248  Q
    |||||||||||||||||||||||||||||||    
T  46707656 ttttttatcatttataattataatgattaaa 46707626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 52345953 - 52345871
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| || ||| ||  |||| |||| |||||||||||||||||||||||| | ||||| |||||||    
T  52345953 aaattaatagttaaatgagttgtttttttgataaaaaatatttttttttatcatttataattataataactaaatcttattca 52345871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 9587827 - 9587872
Alignment:
Q  295 tcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||| |||||| ||||||||||| ||||||||||||| |||||    
T  9587827 tcataattgagaacattgattattttttatgataatatgtaaaaaa 9587872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 10635335 - 10635282
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccg 477  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| ||||||||||    
T  10635335 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccg 10635282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #122
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 12105511 - 12105430
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||  |||| | |||  ||||||| |||| |||||||||||||||||||||||  | ||||| |||||||    
T  12105511 aaattaatagttaaaagagttgtttttttaagaaaaatatttttttttatcatttataattataacaactaaatcttattca 12105430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #123
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 28624560 - 28624613
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| |||| |||||||||| ||||||||||||| | ||||| |||||||    
T  28624560 gaagaaaaatatttttttttatcacttataattataataactaaatcttattca 28624613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #124
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 31530546 - 31530493
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatg 333  Q
    ||||||||||||| |||||||| |||||| ||||||||||| ||  ||||||||    
T  31530546 ttgaatttttatcattcataattgagaacattgattattttttactataatatg 31530493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #125
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 35874172 - 35874115
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  35874172 aatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 35874115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #126
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 52365963 - 52365874
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttttt 223  Q
    ||||||| |||||||||||||||| ||| | ||||||| |  || ||||||| ||||| |||| | ||  |||||||| |||||||||||    
T  52365963 gtacacccaacatatttaaatgtaccggcacaccaaacttttaattttataggtaaatgagttgttttatgaagaaaaatattatttttt 52365874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #127
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 52861649 - 52861568
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||| | || | |||  || |||  |||||||||||| |||||||||||||||| | ||||| |||||||    
T  52861649 aaatttatagttaaatgaattgttttttaaaaaaatatattattttttagcatttataattataataactaaatcttattca 52861568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 122 - 258
Target Start/End: Original strand, 32567 - 32699
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| || |||||||| ||||||||| | |||| |||||   ||||||||||| |||||||||||||||||| | ||| |||||||| |||||||||    
T  32567 gcaaattctaccgtacacccaacatatttgagtgtaccggta---caaacctaaaa-tttatagttaaataagttgttttttgaagaaaaatattatttt 32662  T
Q  222 ttatcatttataattataatgattaaattttattcac 258  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  32663 ttatcatgtataattataatgattaaatgttattcac 32699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 415 - 501
Target Start/End: Original strand, 32834 - 32920
Alignment:
Q  415 caaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||| ||||||| ||||||||| ||||||||||||||| |||||| || ||||||||||||||||||| | |||| ||||||||    
T  32834 caaataactatttatctcataaaatagatcgttaatttatagatttagaaagtaagagtaccggtacaccacagtttacgagtgtac 32920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 9e-29; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 123 - 340
Target Start/End: Original strand, 27171916 - 27172144
Alignment:
Q  123 caaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttt 222  Q
    |||||| || |||||||| ||||||||| | |||| ||||| ||||||||   |||||||||||||||| |||| | ||| |||||||| ||||||||||    
T  27171916 caaattctaccgtacacccaacatatttgagtgtaccggtacaccaaaccgttaaatttatagttaaatgagttattttt-gaagaaaaatattattttt 27172014  T
Q  223 tatcatttataattataatgatt-aaattttattca-cnnnnnnnttaaccaaataaaa----------ttgaatttttatcgttcataatagagaactt 310  Q
    ||||||||||||||||||||||| |||| ||||||| |       | ||| || |||||          |||||||||||||| ||||||||||||||||    
T  27172015 tatcatttataattataatgattaaaatcttattcaccaaaagcatcaacgaattaaaattgaatttttttgaatttttatcgctcataatagagaactt 27172114  T
Q  311 tgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||||| |||||||||| |||||    
T  27172115 tgattattttatacgataatatgtaaaaaa 27172144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 36274666 - 36274558
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac-atagaagtt 510  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||  |||||||||| |||| |||||||||    
T  36274666 cgacgaataactatttatttcataaaattgatcgttaatttatatatttaggaagcaagagtaccagtacacctcaatttatgagggtacaatagaagtt 36274567  T
Q  511 cccttaaaa 519  Q
    | |||||||    
T  36274566 cacttaaaa 36274558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 411 - 515
Target Start/End: Original strand, 17792507 - 17792612
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||| |||||||||  | |||||||| |||||| ||||||||||||||| |||||||||    
T  17792507 ccgacaaataactatttatttcataaaattgattgttaatgtataaatttaggaagcaggagtaccgatacaccttaatttatgagtgtaccatagaagt 17792606  T
Q  510 tccctt 515  Q
    ||||||    
T  17792607 tccctt 17792612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 134 - 345
Target Start/End: Original strand, 31158574 - 31158790
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagtt-aaataagttttgtttcgaagaaaactattatttttt-atca-ttt 230  Q
    ||||||| ||||||||| | || | ||||| |||||||||  |||||||||||| |||| |||| | ||| |||||||| ||||||||||| |||| |||    
T  31158574 gtacacccaacatatttgagtgcaccggtacaccaaacctttaaatttatagtttaaatgagttgttttttgaagaaaaatattatttttttatcaattt 31158673  T
Q  231 ataattataatgattaaattttattca-cnnnnnnnttaaccaaataaaattgaatttttat-cgttcataatagagaactttgattattttatatgata 328  Q
    ||||||||||||||||||| ||||||| |       | ||  |||||||||||||||||| |   ||  |||||||||||||||||||||||||||||||    
T  31158674 ataattataatgattaaatcttattcaccaaaaacgtcaatgaaataaaattgaatttttttgaatttttaatagagaactttgattattttatatgata 31158773  T
Q  329 atatgttaaaaatttac 345  Q
    |||||  ||||||||||    
T  31158774 atatggcaaaaatttac 31158790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 411 - 511
Target Start/End: Original strand, 27172217 - 27172318
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagt 509  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||| |||||||||  | |||||||| |||||| |||||||| |||||| |||||||||    
T  27172217 ccgacaaataactatttatttcataaaattgattgttaatgtataaatttaggaagcaggagtaccgatacaccttaatttattagtgtaccatagaagt 27172316  T
Q  510 tc 511  Q
    ||    
T  27172317 tc 27172318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 142 - 248
Target Start/End: Original strand, 17792224 - 17792330
Alignment:
Q  142 aacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    ||||||||| | ||||  |||| ||||||||   |||||||||||||||| ||||   ||| |||||||| |||||||||||||||||||||||||||||    
T  17792224 aacatatttgagtgtactggtacaccaaacccttaaatttatagttaaatgagttactttttgaagaaaaatattattttttatcatttataattataat 17792323  T
Q  242 gattaaa 248  Q
    |||||||    
T  17792324 gattaaa 17792330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 124 - 340
Target Start/End: Complemental strand, 24937994 - 24937762
Alignment:
Q  124 aaattttatcgtacacctaacatatttaaatgtatc-ggtataccaaacctaaaaatttatagttaaataagtt--ttgtttcgaagaaaactattattt 220  Q
    |||||| | |||||||| || |||||| | |||||| |||| |||||||||  ||||||||| |||||| ||||  || ||| |||||||| ||||||||    
T  24937994 aaatttcaccgtacacccaatatatttgagtgtatccggtacaccaaacctttaaatttataattaaatgagttattttttttgaagaaaaatattattt 24937895  T
Q  221 tttatcatttataattataatgatt-aaattttattca-cnnnnnnnttaaccaaataaaattg-----------aatttttatcgttcataatagagaa 307  Q
    ||||||||||| ||||||||||||| |||| ||||||| |       | ||| || ||||||||           ||||||||||| |||||||||||||    
T  24937894 tttatcatttacaattataatgattaaaatcttattcaccaaaagcatcaacaaattaaaattgatttttttttaaatttttatcgctcataatagagaa 24937795  T
Q  308 ctttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||||| |||||||||| |||||    
T  24937794 ctttgattattttatacgataatatgtaaaaaa 24937762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 29454615 - 29454479
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagtt-ttgtttcgaagaaaactattattt 220  Q
    ||||||| ||| ||||||| || |||||| | |||| ||||| ||| |  ||  ||||| ||||||||||||||| || ||| |||||||| ||||||||    
T  29454615 gcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaataagttatttttttgaagaaaaatattattt 29454516  T
Q  221 tttatcatttataattataatgattaaattttattca 257  Q
    ||||||||||||||||||||| | ||||| |||||||    
T  29454515 tttatcatttataattataataactaaatcttattca 29454479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 6631311 - 6631176
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||||| || |||||| | |||| ||||||||| |  ||  ||||| |||||||||| |||| | ||| |||||||| |||| ||||    
T  6631311 gcaaattctatggtacacccaatatatttgagtgtaccggtatacccattctttaaattaatagttaaattagttgttttttgaagaaaaatattttttt 6631212  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||| | ||||| |||||||    
T  6631211 ttatcatttataattataataactaaatcttattca 6631176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 142 - 340
Target Start/End: Original strand, 35587967 - 35588169
Alignment:
Q  142 aacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    ||||||||| | |||| ||||| || || |||  || ||||||| ||||| |||  | ||| |||||||| |||||||||||||||||||||||||||||    
T  35587967 aacatatttgagtgtaccggtacactaaccctttaattttataggtaaatgagtcgttttttgaagaaaaatattattttttatcatttataattataat 35588066  T
Q  242 gattaaattttattca-cnnnnnnnttaaccaaataa---aattgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaa 337  Q
     ||||||| ||||||| |       | ||| ||||||     || ||||| ||||| ||||||||||||| ||||||||||||||| |||||||||| ||    
T  35588067 aattaaatcttattcatcaaaagtgtaaacaaaataattttttttaatttatatcgctcataatagagaattttgattattttatacgataatatgtaaa 35588166  T
Q  338 aaa 340  Q
    |||    
T  35588167 aaa 35588169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 423 - 513
Target Start/End: Complemental strand, 36672101 - 36672010
Alignment:
Q  423 tatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    ||||||||||||||||||||| |||| |||||| ||||| |||  |||||||||||||||||  |||||| ||||||| |||||||||||||    
T  36672101 tatttatttcataaaattgatagttagtttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccatagaagttccc 36672010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 6631416 - 6631506
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| || ||||||||||||||||||||||| |||||| ||||| |||  |||||||||| ||||||  |||||| ||||||||    
T  6631416 ccgacaaataactaattatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccgatacacctcaatttacgagtgtac 6631506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 179 - 257
Target Start/End: Complemental strand, 36672355 - 36672277
Alignment:
Q  179 tttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||||| ||||| |||| | ||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||    
T  36672355 tttataggtaaatgagttattttttgaagaaaaatattattttttatcatttaaaattataatgattaaatcttattca 36672277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 45452731 - 45452657
Alignment:
Q  183 tagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  45452731 tagttaaataagttattttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 45452657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 412 - 501
Target Start/End: Original strand, 32238240 - 32238328
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||| | |||||||||||||| |||||||||||||||| |||||| ||| |||||||||  ||||||  |||||||||||||||    
T  32238240 cgacaaataact-tttatttcataaaaatgatcgttaatttataaatttagaaaacaagagtaccaatacacctcaatttatgagtgtac 32238328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 40776970 - 40776889
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| || ||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  40776970 aaattaatagttaaataagttgttttttgaggaaaaatattattttttatcatttataattataataactaaatcttattca 40776889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 4214901 - 4214765
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||||| || |||||| | |||| ||||||||| |  ||  ||||| |||||||||||| || | ||| |||||||| |||||||||    
T  4214901 gcaaattctatggtacacccaatatatttgagtgtaccggtatacccactctttaaattaatagttaaataaattattttttgaagaaaaatattatttt 4214802  T
Q  222 tt-atcatttataattataatgattaaattttattca 257  Q
    || |||||||||||||||||| | ||||| |||||||    
T  4214801 tttatcatttataattataataactaaatcttattca 4214765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 134 - 257
Target Start/End: Original strand, 24377322 - 24377446
Alignment:
Q  134 gtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactatta-ttttttatcatttat 232  Q
    ||||||| ||||||||| | |||| ||||| |||||||||  || ||||||| ||||| |||| | ||  |||||||| ||||| |||||| | ||||||    
T  24377322 gtacacccaacatatttgagtgtaccggtacaccaaacctttaattttataggtaaatgagttgttttatgaagaaaaatattatttttttcttatttat 24377421  T
Q  233 aattataatgattaaattttattca 257  Q
    ||||||||||||||||| |||||||    
T  24377422 aattataatgattaaatcttattca 24377446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 415 - 514
Target Start/End: Original strand, 31158861 - 31158961
Alignment:
Q  415 caaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    ||||||| |||||||||||||||||| |||||||||||||| |||||||||  |||||||| | ||||||  |||||  ||||||| | |||||||||||    
T  31158861 caaataactatttatttcataaaattaatcgttaatttatagatttaggaagcaagagtactgatacacctcaatttgcgagtgtaccgtagaagttccc 31158960  T
Q  514 t 514  Q
    |    
T  31158961 t 31158961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 241
Target Start/End: Original strand, 1043060 - 1043179
Alignment:
Q  123 caaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactatta-tttt 221  Q
    |||||| ||| ||||||| || |||||| | |||||||||| ||| |  ||  ||||| ||||||||||||||| | ||| |||||||| ||||| ||||    
T  1043060 caaattctatggtacacccaatatatttgagtgtatcggtacacccactctttaaattaatagttaaataagttattttttgaagaaaaatattattttt 1043159  T
Q  222 ttatcatttataattataat 241  Q
    ||||||||||||||||||||    
T  1043160 ttatcatttataattataat 1043179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 416 - 513
Target Start/End: Complemental strand, 29265688 - 29265589
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtaca-tagaagttccc 513  Q
    ||||| |||||||||||||||||  |||||||||||||||| | ||| |||| |||||||||||||||||  | ||| |||||||||| |||||||||||    
T  29265688 aaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaaacaagagtaccggtacacctcactttgtgagtgtacagtagaagttccc 29265589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 24937688 - 24937598
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||| ||||| |||  | |||||||  |||||| |||||||| |||||||    
T  24937688 ccgacaaataactatttatttcataaaattgattgttaatgtataaatttaagaagcaggagtaccaatacaccttaatttataagtgtac 24937598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 41720302 - 41720384
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| || ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  41720302 aaattcatagttaaatgagttgtttttttgaagaaaaatattattttttatcatttataattataataactaaatcttattca 41720384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 24377605 - 24377694
Alignment:
Q  411 ccgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta 500  Q
    |||| |||||| ||||||||||||||||||||| | || |||||| ||||| |||  |||||||||||||||||  |||||| |||||||    
T  24377605 ccgataaataactatttatttcataaaattgattgctagtttataaatttatgaagcaagagtaccggtacacctcaatttacgagtgta 24377694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 17792374 - 17792434
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||| || ||||||||||||||||||||||||||  ||||||||| |||||    
T  17792374 ttgaatttttatcgctcgtaatagagaactttgattattttatacaataatatgtaaaaaa 17792434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 425 - 514
Target Start/End: Original strand, 38803751 - 38803842
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccct 514  Q
    |||||||||||||| ||||||||||||||||  ||| |  ||| |||||||||||||||| | ||||||| |||||| ||||||||||||||    
T  38803751 tttatttcataaaagtgatcgttaatttataagttttgtaaaacaagagtaccggtacactaaaatttataagtgtaccatagaagttccct 38803842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 15451800 - 15451718
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| |  || |||||||| ||||||||||| |||||||||||||||||| | |||||||||||||    
T  15451800 aaattaatagttaaatgagttattctttgaagaaaaatattatttttttatcatttataattataataactaaattttattca 15451718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 491
Target Start/End: Original strand, 17642390 - 17642456
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattt 491  Q
    |||||||||||||| |||| ||||||||||| ||||  ||| |||||||||||||||||| ||||||    
T  17642390 tttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaattt 17642456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 345
Target Start/End: Original strand, 24377485 - 24377547
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||| | ||||| ||||    
T  24377485 aatttttatcgcttataatagagaactttgattattttatacgataatatctaaaaaaattac 24377547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 36835659 - 36835749
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||    
T  36835659 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccc 36835749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 44542141 - 44542095
Alignment:
Q  195 ttttgtttcgaagaaaactattattttttatcatttataattataat 241  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  44542141 tttttttttgaagaaaactattattttttatcatttataattataat 44542095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 413 - 516
Target Start/End: Original strand, 3053104 - 3053209
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    ||||||||| | |||||||||||||| ||||||||||||||||  ||| | |||| ||||||| |||||||| | ||||| ||||| || | ||||||||    
T  3053104 gacaaataactttttatttcataaaaatgatcgttaatttataagttttgtgaaacaagagtatcggtacactaaaatttctgagtataccgtagaagtt 3053203  T
Q  511 ccctta 516  Q
    ||||||    
T  3053204 ccctta 3053209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 412 - 501
Target Start/End: Complemental strand, 32719057 - 32718968
Alignment:
Q  412 cgacaaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||| || ||| || ||||||| |||||||||| ||||  ||||| |||||| ||||||||||||||| ||||||| | ||||||    
T  32719057 cgacaaatagttcttttttacataaaaatgatcgttaacttattaatttatgaaataggagtaccggtacaccttaatttaagtgtgtac 32718968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 413 - 512
Target Start/End: Original strand, 38627292 - 38627393
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||| || |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| ||||||||||    
T  38627292 gacaaatacttttttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacacttaaaattgtgagtgtaccatagaagtt 38627391  T
Q  511 cc 512  Q
    ||    
T  38627392 cc 38627393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 40578748 - 40578829
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| | | |||  ||||||||||||||||||||||||||||| ||||||| |||||||    
T  40578748 aaattcatagttaaatgagttattttttggaaaaatatattattttttatcatttataattataataattaaatcttattca 40578829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 416 - 483
Target Start/End: Original strand, 36162500 - 36162568
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacac 483  Q
    ||||| |||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||||||||||    
T  36162500 aaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaaataagagtaccggtacac 36162568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 255
Target Start/End: Original strand, 37465709 - 37465817
Alignment:
Q  147 atttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgatta 246  Q
    |||||| ||||| |||| |||||| | | ||||| ||||||||||| ||| | ||| ||||| ||  ||||||||||||||  |||||||||||| ||||    
T  37465709 atttaagtgtattggtacaccaaatcaataaattaatagttaaatatgttattttttgaagagaaaaattattttttatcacctataattataataatta 37465808  T
Q  247 aattttatt 255  Q
    ||| |||||    
T  37465809 aatcttatt 37465817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 491
Target Start/End: Original strand, 2273326 - 2273392
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacaccataattt 491  Q
    |||||||||||||| |||  ||||||||||| ||||  ||| |||||||||||||||||| ||||||    
T  2273326 tttatttcataaaaatgacagttaatttataaatttttgaagtaagagtaccggtacaccttaattt 2273392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 5328653 - 5328735
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaacta-ttattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| ||| |||| || ||||||||||||||||||||||||||| | ||||| |||||||    
T  5328653 aaattcatagttaaatgagttgttttttgaaaaaaaataattattttttatcatttataattataataactaaatcttattca 5328735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 6630755 - 6630833
Alignment:
Q  179 tttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||||| ||||| |||| | ||| ||||| || ||||||||||||| |||||||||||| |||||||||  |||||||    
T  6630755 tttataggtaaatgagttgttttttgaagagaaatattattttttattatttataattatgatgattaaaccttattca 6630833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 257
Target Start/End: Complemental strand, 26988792 - 26988659
Alignment:
Q  123 caaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattattttt 222  Q
    |||||| ||| ||||||| || |||||| | |||||||||| ||  |  ||  ||||| |||||||||||||||   ||| |||||||| |||| |||||    
T  26988792 caaattatatggtacacccaatatatttgagtgtatcggtacactcattctttaaattaatagttaaataagttgctttttgaagaaaaatatt-ttttt 26988694  T
Q  223 tatcatttataattataatgattaaattttattca 257  Q
    ||| ||||||||||||||| | ||||| |||||||    
T  26988693 tattatttataattataataactaaatattattca 26988659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 513
Target Start/End: Complemental strand, 29454245 - 29454143
Alignment:
Q  413 gacaaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||| ||||||||| |||||||  |||||||||||||||| | ||| |||  | ||||||||||||||| || ||| |||||||| | ||||||||    
T  29454245 gacaaatagttatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacaccttactttgtgagtgtaccgtagaagtt 29454146  T
Q  511 ccc 513  Q
    |||    
T  29454145 ccc 29454143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 416 - 501
Target Start/End: Complemental strand, 43841942 - 43841856
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    |||||||||||||||| ||||||  |||||||||||||||| | ||| |||  |||||||||  |||||| || |||||||||||||    
T  43841942 aaataattatttattttataaaaaatgatcgttaatttataaaattatgaagaaagagtaccaatacaccttattttatgagtgtac 43841856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 255
Target Start/End: Original strand, 2731791 - 2731924
Alignment:
Q  123 caaattttatcgtacacctaacatatttaaatgtatcggtataccaaa-cctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    |||||||||| ||||||| ||||||||||| |||| | ||| |||||| ||| ||| || |||||||||   ||| | ||| ||||| ||  ||||||||    
T  2731791 caaattttatggtacacccaacatatttaagtgtaccagtacaccaaacccttaaatttaatagttaaaagtgttattttttgaagagaaaaattatttt 2731890  T
Q  222 ttatcatttataattataatgattaaattttatt 255  Q
     |||||| |||||||| ||| ||||||| |||||    
T  2731891 ctatcatctataattacaataattaaatcttatt 2731924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 9497625 - 9497674
Alignment:
Q  208 aaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  9497625 aaaaatattattttttatcatttataattataataactaaatcttattca 9497674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 10706875 - 10706826
Alignment:
Q  208 aaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  10706875 aaaaatattattttttatcatttataattataataactaaatcttattca 10706826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 26522318 - 26522237
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||| ||  | || |||||||||||||||||||||||| | |||||||||||||    
T  26522318 aaattcatagttaaatgagttgttttttgaaggaatttttttttttttatcatttataattataataactaaattttattca 26522237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 501
Target Start/End: Complemental strand, 29039715 - 29039626
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac 501  Q
    ||||||||| | |||||||||||||| ||||||||||||| ||  ||| | |||| ||||||| |||||||| | ||||| |||||||||    
T  29039715 gacaaataactttttatttcataaaaatgatcgttaatttgtaagttttgtgaaacaagagtatcggtacactaaaatttctgagtgtac 29039626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 512
Target Start/End: Original strand, 35037780 - 35037869
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttcc 512  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| ||||||||||||    
T  35037780 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttcc 35037869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 36162279 - 36162328
Alignment:
Q  208 aaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  36162279 aaaaatattattttttatcatttataattataataactaaatcttattca 36162328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 36672243 - 36672186
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    ||||||||||| ||||||  ||||||||||||||||||||| |||| ||||| |||||    
T  36672243 aatttttatcgctcataacggagaactttgattattttatacgatagtatgtaaaaaa 36672186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 512
Target Start/End: Original strand, 38971781 - 38971870
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac-atagaagttcc 512  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || ||||||||| |||||||||||    
T  38971781 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtactatagaagttcc 38971870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 512
Target Start/End: Original strand, 39002879 - 39002968
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgtac-atagaagttcc 512  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || ||||||||| |||||||||||    
T  39002879 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtactatagaagttcc 39002968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 42047232 - 42047195
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttatt 255  Q
    |||||||||||||||||||||||| |||||||||||||    
T  42047232 ttttttatcatttataattataataattaaattttatt 42047195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 2261203 - 2261263
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  2261203 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 2261263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 9008135 - 9008068
Alignment:
Q  416 aaataattatttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtacacc 484  Q
    |||||| | |||||||||||||||  |||||||||||||  ||||| |||| |||||||||||||||||    
T  9008135 aaataactttttatttcataaaata-atcgttaatttatcaatttatgaaacaagagtaccggtacacc 9008068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 423 - 482
Target Start/End: Original strand, 34634168 - 34634228
Alignment:
Q  423 tatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtaca 482  Q
    ||||||||||||||||  |||||||||||||||| | ||| |||| |||||||||||||||    
T  34634168 tatttatttcataaaaaatgatcgttaatttataaaattatgaaaaaagagtaccggtaca 34634228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 36667288 - 36667371
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactatta--ttttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||||  |||||||||||| ||||||||||| | ||||| |||||||    
T  36667288 aaattcatagttaaatgagttattttttgaagaaaaatattattttttttatcattcataattataataactaaatcttattca 36667371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 40776855 - 40776795
Alignment:
Q  280 ttgaatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaa 340  Q
    |||||||||||||  ||||||| |||||| || |||||||| ||||||||||||| |||||    
T  40776855 ttgaatttttatcactcataatcgagaacattcattattttttatgataatatgtaaaaaa 40776795  T

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Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Original strand, 464567 - 464626
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||||||||||||||||||| | |||| |||| |||||||||||    
T  464567 tttatttcattaaagtgatcgttaatttatatattttgtgaaacaagaataccggtacac 464626  T

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Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 322
Target Start/End: Original strand, 6630869 - 6630908
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttat 322  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  6630869 aatttgtatcgctcataatagagaactttgattattttat 6630908  T

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Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 40267578 - 40267617
Alignment:
Q  218 ttttttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  40267578 ttttttatcatttataattataataattaaatcttattca 40267617  T

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Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 716 - 754
Target Start/End: Complemental strand, 11323136 - 11323098
Alignment:
Q  716 ttgcttaatatgtgcccttaggacacaagttagcatgac 754  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  11323136 ttgcttaatatgtgcctttaagacacaagttagcatgac 11323098  T

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Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 34633918 - 34634000
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| || ||| |||||||| ||||||||| ||||||||||| || |||| | ||||| |||||||    
T  34633918 aaattaatagttaaatgagttgtttttttgaagaaaaatattattttctatcatttatatttgtaataactaaatcttattca 34634000  T

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Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 37676289 - 37676207
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattatttttt-atcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| | ||| |||||||| |||| |||||| |||||||||||||||| | | ||||| |||||||    
T  37676289 aaattcatagttaaatgagttgttttttgaagaaaaatattttttttttatcatttataattatagtaactaaatcttattca 37676207  T

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Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 413 - 513
Target Start/End: Complemental strand, 43182826 - 43182724
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagtt 510  Q
    |||||||| || |||||||||| ||| || |  ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| ||||||||||    
T  43182826 gacaaatacttttttatttcattaaagtggtttttaatttatatattttgtgaaacaagagtaccggtacacttaaaattgtgagtgtaccatagaagtt 43182727  T
Q  511 ccc 513  Q
    |||    
T  43182726 ccc 43182724  T

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Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 2749631 - 2749578
Alignment:
Q  204 gaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    |||||||| ||||||||| ||||||||||| ||||||| | ||||| |||||||    
T  2749631 gaagaaaaatattattttctatcatttatatttataataactaaatcttattca 2749578  T

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Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 515
Target Start/End: Complemental strand, 10706654 - 10706553
Alignment:
Q  416 aaataattatttatttcataaaat-tgatcgttaatttatatatttaggaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    ||||| |||||||||||| ||||  |||||||||||||||| | ||| |||  ||||||||| |||||||  | ||| |||||||| | |||||||||||    
T  10706654 aaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaagcaagagtaccagtacacctcactttgtgagtgtaccgtagaagttccc 10706555  T
Q  514 tt 515  Q
    ||    
T  10706554 tt 10706553  T

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Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 519
Target Start/End: Original strand, 21835747 - 21835844
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac-cataatttatgagtgtac-atagaagttcccttaaaa 519  Q
    |||||||||| ||| || || |||||||||||| || | |||| |||||||| ||||||| || || || ||||||||| ||||||||||||||||||    
T  21835747 tttatttcattaaagtggtctttaatttatataatttgtgaaacaagagtactggtacactcaaaaattgtgagtgtaccatagaagttcccttaaaa 21835844  T

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Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 425 - 482
Target Start/End: Complemental strand, 36886251 - 36886194
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttaggaaataagagtaccggtaca 482  Q
    ||||||||| |||| |||| ||||||||||||||||   || ||||||||||||||||    
T  36886251 tttatttcaaaaaaatgatagttaatttatatatttttaaattaagagtaccggtaca 36886194  T

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Target: scaffold0775 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 244 - 110
Alignment:
Q  122 gcaaattttatcgtacacctaacatatttaaatgtatcggtataccaaacctaaaaatttatagttaaataagttttgtttcgaagaaaactattatttt 221  Q
    ||||||| ||| ||||||| ||||||||| | |||| ||||| ||||| |||  || ||||||| ||||| |||| | ||| |||||||| |||||||||    
T  244 gcaaattctatggtacacccaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgagttgttttttgaagaaaaatattatttt 145  T
Q  222 ttatcatttataattataatgattaaattttattca 257  Q
    |||||||||||| ||||||| ||||||| |||||||    
T  144 ttatcatttatagttataat-attaaatcttattca 110  T

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Target: scaffold0775; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 79 - 17
Alignment:
Q  283 aatttttatcgttcataatagagaactttgattattttatatgataatatgttaaaaatttac 345  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  79 aatttttatcgctcataatagagaactttgattactttatacgataatatgtaaaaaaattac 17  T

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Target: scaffold0432 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 3381 - 3300
Alignment:
Q  176 aaatttatagttaaataagttttgtttcgaagaaaactattattttttatcatttataattataatgattaaattttattca 257  Q
    ||||| ||||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  3381 aaattaatagttaaataagttattttttgaagaaaaatattattttttatcatttataattataataaataaatcttattca 3300  T

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Target: scaffold0308 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 7265 - 7348
Alignment:
Q  176 aaatttatagttaaataagtt-ttgtttcgaagaaaactattatttt-ttatcatttataattataatgattaaattttattca 257  Q
    ||||| |||||||||| |||| || ||| |||||||| ||||||||| |||||||||||||||||||| | ||||| |||||||    
T  7265 aaattcatagttaaatgagttgtttttttgaagaaaaatattatttttttatcatttataattataataactaaatcttattca 7348  T

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Target: scaffold0493 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 513
Target Start/End: Original strand, 1704 - 1794
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacaccataatttatgagtgta-catagaagttccc 513  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||    
T  1704 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttccc 1794  T

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Target: scaffold0239 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 425 - 517
Target Start/End: Original strand, 15698 - 15792
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatattt-aggaaataagagtaccggtacaccataatttatgagtgta-catagaagttcccttaa 517  Q
    |||||||||| ||| ||||| ||||||| ||||||| | |||| ||||||||||||||||   || || |||||||| |||||||||||||||||    
T  15698 tttatttcattaaagtgatctttaatttctatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagttcccttaa 15792  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 271071 - 271023
Alignment:
Q  413 gacaaataattatttatttcataaaattgatcgttaatttatatattta 461  Q
    ||||||||| | |||||||||||||| |||||||||||||||| |||||    
T  271071 gacaaataactctttatttcataaaaatgatcgttaatttataaattta 271023  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 166509 - 166450
Alignment:
Q  425 tttatttcataaaattgatcgttaatttatatatttag-gaaataagagtaccggtacac 483  Q
    |||||||||| ||| ||||| ||||||||||||||| | |||| ||||||||||||||||    
T  166509 tttatttcattaaagtgatctttaatttatatattttgtgaaacaagagtaccggtacac 166450  T

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