View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3929_low_104 (Length: 228)

Name: NF3929_low_104
Description: NF3929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3929_low_104
NF3929_low_104
[»] chr8 (48 HSPs)
chr8 (1-199)||(21389237-21389435)
chr8 (1-198)||(21395768-21395965)
chr8 (1-198)||(21790261-21790458)
chr8 (26-206)||(17353715-17353894)
chr8 (26-206)||(19899257-19899436)
chr8 (13-206)||(16184877-16185069)
chr8 (3-201)||(23776617-23776816)
chr8 (74-204)||(19976654-19976784)
chr8 (56-206)||(24755912-24756062)
chr8 (26-206)||(19983255-19983434)
chr8 (1-206)||(21168499-21168705)
chr8 (26-204)||(21161838-21162015)
chr8 (1-70)||(16199559-16199628)
chr8 (1-65)||(21778697-21778761)
chr8 (159-206)||(22113507-22113554)
chr8 (159-206)||(22135010-22135057)
chr8 (159-206)||(22166160-22166207)
chr8 (159-206)||(23846794-23846841)
chr8 (160-206)||(17055168-17055214)
chr8 (153-206)||(19259379-19259432)
chr8 (1-54)||(31971394-31971447)
chr8 (150-206)||(20465817-20465873)
chr8 (150-206)||(22010457-22010513)
chr8 (159-206)||(15538728-15538775)
chr8 (159-206)||(17828362-17828409)
chr8 (159-206)||(20856203-20856250)
chr8 (159-206)||(24434016-24434063)
chr8 (159-206)||(39094720-39094767)
chr8 (159-202)||(43252093-43252136)
chr8 (148-206)||(30643069-30643127)
chr8 (160-206)||(32598959-32599005)
chr8 (160-206)||(32605491-32605537)
chr8 (165-206)||(15602795-15602836)
chr8 (165-206)||(15611247-15611288)
chr8 (159-204)||(23834453-23834498)
chr8 (1-70)||(45130911-45130980)
chr8 (159-206)||(377572-377619)
chr8 (159-206)||(15532168-15532215)
chr8 (159-206)||(16231254-16231301)
chr8 (159-206)||(16861105-16861152)
chr8 (159-202)||(19278066-19278109)
chr8 (159-202)||(21972367-21972410)
chr8 (159-202)||(21976452-21976495)
chr8 (159-206)||(22028837-22028884)
chr8 (166-205)||(22045145-22045184)
chr8 (159-205)||(18619758-18619804)
chr8 (165-206)||(17926485-17926526)
chr8 (1-46)||(21918937-21918982)
[»] chr2 (36 HSPs)
chr2 (1-206)||(40621986-40622190)
chr2 (75-206)||(23038245-23038376)
chr2 (74-202)||(22740742-22740870)
chr2 (1-206)||(22758493-22758699)
chr2 (15-206)||(22798904-22799094)
chr2 (75-206)||(23019484-23019615)
chr2 (1-70)||(20309244-20309313)
chr2 (121-206)||(23101008-23101093)
chr2 (1-60)||(38039-38098)
chr2 (159-206)||(15477884-15477931)
chr2 (159-206)||(19928281-19928328)
chr2 (160-206)||(26125484-26125530)
chr2 (160-206)||(41667230-41667276)
chr2 (161-206)||(25963495-25963540)
chr2 (74-206)||(45677933-45678065)
chr2 (159-202)||(12901295-12901338)
chr2 (159-206)||(22460969-22461016)
chr2 (159-202)||(24649637-24649680)
chr2 (159-202)||(27379215-27379258)
chr2 (159-202)||(27383261-27383304)
chr2 (159-202)||(27602077-27602120)
chr2 (159-202)||(41530792-41530835)
chr2 (148-206)||(21918094-21918152)
chr2 (128-206)||(24673839-24673917)
chr2 (165-206)||(24175097-24175138)
chr2 (165-206)||(24655117-24655158)
chr2 (165-206)||(25961313-25961354)
chr2 (165-206)||(37524964-37525005)
chr2 (165-206)||(40428762-40428803)
chr2 (150-206)||(44370077-44370133)
chr2 (159-206)||(23187355-23187402)
chr2 (159-206)||(23598618-23598665)
chr2 (159-202)||(24628261-24628304)
chr2 (1-53)||(22337253-22337306)
chr2 (165-206)||(24735689-24735730)
chr2 (170-206)||(24716309-24716345)
[»] scaffold0215 (1 HSPs)
scaffold0215 (1-206)||(26960-27164)
[»] chr1 (33 HSPs)
chr1 (1-206)||(21714685-21714891)
chr1 (3-206)||(21787820-21788023)
chr1 (56-206)||(42864989-42865139)
chr1 (56-206)||(20091251-20091401)
chr1 (56-206)||(22831156-22831306)
chr1 (1-70)||(38801304-38801373)
chr1 (74-204)||(18181901-18182031)
chr1 (90-199)||(22468481-22468590)
chr1 (56-203)||(6152046-6152193)
chr1 (160-206)||(21615718-21615764)
chr1 (1-102)||(48603652-48603754)
chr1 (160-205)||(20138364-20138409)
chr1 (150-206)||(21022923-21022979)
chr1 (150-206)||(22449044-22449100)
chr1 (159-206)||(12647149-12647196)
chr1 (159-206)||(16080223-16080270)
chr1 (159-202)||(16375240-16375283)
chr1 (159-206)||(17678366-17678413)
chr1 (159-206)||(21305594-21305641)
chr1 (159-202)||(21407636-21407679)
chr1 (159-206)||(33797813-33797860)
chr1 (159-206)||(36819087-36819134)
chr1 (159-206)||(45489522-45489569)
chr1 (159-206)||(46975747-46975794)
chr1 (159-202)||(52639822-52639865)
chr1 (165-206)||(3472704-3472745)
chr1 (159-207)||(19212147-19212195)
chr1 (159-206)||(8761411-8761458)
chr1 (159-206)||(20228588-20228635)
chr1 (159-206)||(23819078-23819125)
chr1 (159-206)||(24782879-24782926)
chr1 (159-206)||(45310145-45310192)
chr1 (165-206)||(33049866-33049907)
[»] chr7 (43 HSPs)
chr7 (1-206)||(18154614-18154820)
chr7 (1-206)||(17137841-17138045)
chr7 (26-206)||(9703429-9703608)
chr7 (1-203)||(12187151-12187352)
chr7 (68-206)||(11880456-11880594)
chr7 (13-206)||(24054618-24054810)
chr7 (74-206)||(19649262-19649394)
chr7 (1-70)||(27847746-27847815)
chr7 (74-206)||(12321520-12321652)
chr7 (148-206)||(10508860-10508918)
chr7 (159-206)||(13149434-13149481)
chr7 (1-70)||(40443528-40443597)
chr7 (159-206)||(6801492-6801539)
chr7 (159-202)||(12718949-12718992)
chr7 (159-202)||(12723860-12723903)
chr7 (159-202)||(16906983-16907026)
chr7 (159-202)||(18279684-18279727)
chr7 (159-202)||(18283647-18283690)
chr7 (159-206)||(48593235-48593282)
chr7 (160-206)||(16275772-16275818)
chr7 (165-206)||(9445937-9445978)
chr7 (165-206)||(14430179-14430220)
chr7 (165-206)||(18557257-18557298)
chr7 (159-207)||(13462041-13462089)
chr7 (159-206)||(18837-18884)
chr7 (150-205)||(2760413-2760468)
chr7 (159-206)||(9593625-9593672)
chr7 (159-206)||(9644588-9644635)
chr7 (159-206)||(11312928-11312975)
chr7 (159-206)||(11987492-11987539)
chr7 (159-202)||(12715145-12715188)
chr7 (159-206)||(13635248-13635295)
chr7 (159-206)||(15580971-15581018)
chr7 (159-206)||(15728604-15728651)
chr7 (159-202)||(16114522-16114565)
chr7 (159-202)||(16117675-16117718)
chr7 (1-83)||(16386147-16386230)
chr7 (159-206)||(16438813-16438860)
chr7 (159-206)||(26292675-26292722)
chr7 (159-204)||(12318407-12318452)
chr7 (165-206)||(20569375-20569416)
chr7 (162-206)||(35151888-35151932)
chr7 (159-191)||(39722546-39722578)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-206)||(36593-36799)
[»] scaffold0101 (1 HSPs)
scaffold0101 (26-206)||(8735-8914)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-206)||(69931-70137)
scaffold0004 (159-206)||(10363-10410)
[»] chr5 (47 HSPs)
chr5 (1-203)||(22032453-22032654)
chr5 (56-206)||(26704257-26704407)
chr5 (56-206)||(26973990-26974140)
chr5 (1-206)||(37724039-37724245)
chr5 (3-206)||(21873387-21873590)
chr5 (56-206)||(23201559-23201710)
chr5 (1-203)||(18769785-18769986)
chr5 (1-206)||(23572216-23572420)
chr5 (56-206)||(23501123-23501273)
chr5 (57-206)||(14079340-14079489)
chr5 (76-206)||(23512318-23512448)
chr5 (159-206)||(123084-123131)
chr5 (159-206)||(21884968-21885015)
chr5 (159-206)||(26172744-26172791)
chr5 (159-206)||(26680870-26680917)
chr5 (159-206)||(26952477-26952524)
chr5 (159-206)||(12028344-12028391)
chr5 (159-206)||(16674432-16674479)
chr5 (159-206)||(17410727-17410774)
chr5 (159-206)||(17918930-17918977)
chr5 (159-206)||(18356607-18356654)
chr5 (159-202)||(19472502-19472545)
chr5 (159-206)||(20232830-20232877)
chr5 (159-202)||(20296128-20296171)
chr5 (159-206)||(20910579-20910626)
chr5 (159-206)||(21340546-21340593)
chr5 (159-206)||(23451637-23451684)
chr5 (159-206)||(23463142-23463189)
chr5 (159-206)||(23535368-23535415)
chr5 (159-206)||(26665910-26665957)
chr5 (159-206)||(26937507-26937554)
chr5 (159-205)||(42805700-42805746)
chr5 (1-54)||(21292899-21292952)
chr5 (165-206)||(21366444-21366485)
chr5 (165-206)||(24222174-24222215)
chr5 (165-206)||(31342403-31342444)
chr5 (159-206)||(1858755-1858802)
chr5 (1-83)||(22075157-22075240)
chr5 (159-206)||(23458881-23458928)
chr5 (159-206)||(25229185-25229232)
chr5 (159-206)||(25293341-25293388)
chr5 (159-201)||(22757416-22757458)
chr5 (1-45)||(1096605-1096650)
chr5 (165-206)||(17718218-17718259)
chr5 (165-206)||(18774490-18774531)
chr5 (165-206)||(20805847-20805888)
chr5 (165-206)||(21887124-21887165)
[»] chr4 (38 HSPs)
chr4 (1-206)||(15121581-15121785)
chr4 (26-206)||(13569674-13569853)
chr4 (17-206)||(23843631-23843819)
chr4 (3-206)||(15093911-15094114)
chr4 (26-206)||(44675794-44675973)
chr4 (56-206)||(12570212-12570362)
chr4 (110-206)||(15124932-15125028)
chr4 (1-70)||(17046623-17046692)
chr4 (159-206)||(2015058-2015105)
chr4 (159-206)||(9556810-9556857)
chr4 (1-54)||(14053231-14053284)
chr4 (157-206)||(19757380-19757429)
chr4 (157-206)||(19782377-19782426)
chr4 (159-202)||(4561116-4561159)
chr4 (159-202)||(5756720-5756763)
chr4 (159-206)||(11250340-11250387)
chr4 (159-206)||(15353085-15353132)
chr4 (163-206)||(16243179-16243222)
chr4 (159-206)||(18222157-18222204)
chr4 (159-206)||(26243444-26243491)
chr4 (159-206)||(27534305-27534352)
chr4 (159-202)||(33742658-33742701)
chr4 (159-206)||(36133741-36133788)
chr4 (148-206)||(16487856-16487914)
chr4 (160-206)||(42997229-42997275)
chr4 (165-206)||(16351627-16351668)
chr4 (165-206)||(16356731-16356772)
chr4 (165-206)||(43255940-43255981)
chr4 (165-206)||(45938433-45938474)
chr4 (158-206)||(16678368-16678416)
chr4 (159-206)||(1951540-1951587)
chr4 (159-206)||(17152266-17152313)
chr4 (159-206)||(18237172-18237219)
chr4 (159-206)||(23139550-23139597)
chr4 (159-206)||(28569223-28569270)
chr4 (160-206)||(14708413-14708459)
chr4 (165-206)||(3413082-3413123)
chr4 (165-206)||(25555802-25555843)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-206)||(174902-175108)
scaffold0021 (1-46)||(124723-124769)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-205)||(20118-20323)
[»] scaffold0261 (1 HSPs)
scaffold0261 (74-205)||(1549-1680)
[»] scaffold0102 (1 HSPs)
scaffold0102 (56-206)||(48238-48388)
[»] chr6 (47 HSPs)
chr6 (56-206)||(19863171-19863321)
chr6 (56-206)||(19873313-19873463)
chr6 (74-202)||(25641965-25642093)
chr6 (74-206)||(22432461-22432593)
chr6 (13-206)||(22438951-22439143)
chr6 (74-206)||(22334669-22334801)
chr6 (1-70)||(22831641-22831710)
chr6 (90-206)||(15041328-15041444)
chr6 (122-206)||(16924657-16924741)
chr6 (56-206)||(21739800-21739950)
chr6 (56-206)||(18907299-18907449)
chr6 (159-206)||(12496588-12496635)
chr6 (1-60)||(16920556-16920615)
chr6 (160-206)||(21702568-21702614)
chr6 (74-206)||(15894207-15894339)
chr6 (122-206)||(16965088-16965172)
chr6 (159-207)||(27553385-27553433)
chr6 (110-206)||(31164625-31164721)
chr6 (159-202)||(8244141-8244184)
chr6 (159-202)||(11567143-11567186)
chr6 (159-206)||(12706968-12707015)
chr6 (159-206)||(16741486-16741533)
chr6 (159-206)||(17804477-17804524)
chr6 (159-202)||(19870871-19870914)
chr6 (159-206)||(22429809-22429856)
chr6 (159-202)||(22863226-22863269)
chr6 (159-202)||(23395349-23395392)
chr6 (159-206)||(23657199-23657246)
chr6 (159-206)||(25135451-25135498)
chr6 (159-206)||(27415721-27415768)
chr6 (159-206)||(27567388-27567435)
chr6 (1-71)||(11185641-11185711)
chr6 (165-206)||(16523181-16523222)
chr6 (165-206)||(22592583-22592624)
chr6 (159-200)||(23990201-23990242)
chr6 (159-199)||(12618630-12618670)
chr6 (150-206)||(22059521-22059577)
chr6 (159-206)||(1587510-1587557)
chr6 (159-206)||(1644985-1645032)
chr6 (159-206)||(5616593-5616640)
chr6 (159-206)||(9482072-9482119)
chr6 (159-206)||(14472550-14472597)
chr6 (159-206)||(20907760-20907807)
chr6 (148-207)||(21834667-21834726)
chr6 (1-70)||(20360873-20360943)
chr6 (165-206)||(18180789-18180830)
chr6 (165-206)||(19790558-19790599)
[»] scaffold0210 (2 HSPs)
scaffold0210 (1-206)||(21584-21788)
scaffold0210 (1-206)||(29476-29680)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-206)||(12895-13099)
scaffold0029 (159-202)||(61395-61438)
scaffold0029 (161-202)||(65311-65352)
[»] scaffold0174 (1 HSPs)
scaffold0174 (74-206)||(18231-18363)
[»] scaffold0081 (3 HSPs)
scaffold0081 (1-206)||(14807-15013)
scaffold0081 (1-206)||(23822-24028)
scaffold0081 (1-206)||(39246-39452)
[»] scaffold0043 (2 HSPs)
scaffold0043 (26-206)||(18402-18581)
scaffold0043 (159-206)||(76950-76997)
[»] scaffold0031 (2 HSPs)
scaffold0031 (74-206)||(65571-65703)
scaffold0031 (159-206)||(53845-53892)
[»] scaffold0096 (1 HSPs)
scaffold0096 (3-206)||(16127-16330)
[»] chr3 (53 HSPs)
chr3 (1-203)||(856272-856473)
chr3 (85-206)||(15877606-15877727)
chr3 (13-206)||(23408581-23408773)
chr3 (26-206)||(23077256-23077435)
chr3 (26-185)||(17524951-17525109)
chr3 (1-102)||(14179570-14179672)
chr3 (25-206)||(14878283-14878464)
chr3 (148-206)||(19725690-19725748)
chr3 (148-206)||(23052855-23052913)
chr3 (150-206)||(16369692-16369748)
chr3 (150-206)||(16910034-16910090)
chr3 (150-206)||(26190787-26190843)
chr3 (159-206)||(326943-326990)
chr3 (159-206)||(1598259-1598306)
chr3 (159-206)||(3833954-3834001)
chr3 (159-202)||(7109982-7110025)
chr3 (159-202)||(7113917-7113960)
chr3 (159-206)||(11300290-11300337)
chr3 (159-206)||(11594918-11594965)
chr3 (127-206)||(15060553-15060632)
chr3 (159-206)||(15482942-15482989)
chr3 (159-206)||(15849864-15849911)
chr3 (159-206)||(15941683-15941730)
chr3 (159-206)||(16690499-16690546)
chr3 (159-206)||(16697072-16697119)
chr3 (159-206)||(16797833-16797880)
chr3 (159-206)||(16808660-16808707)
chr3 (159-206)||(17242252-17242299)
chr3 (159-206)||(20461279-20461326)
chr3 (159-202)||(22337003-22337046)
chr3 (159-202)||(27409426-27409469)
chr3 (159-206)||(38814664-38814711)
chr3 (159-206)||(42326224-42326271)
chr3 (165-207)||(322888-322930)
chr3 (156-206)||(1982589-1982639)
chr3 (148-206)||(12173068-12173126)
chr3 (165-206)||(3402734-3402775)
chr3 (161-206)||(11298307-11298352)
chr3 (165-206)||(12496554-12496595)
chr3 (1-46)||(20698373-20698418)
chr3 (150-206)||(12037731-12037787)
chr3 (159-206)||(7793125-7793172)
chr3 (159-202)||(15617657-15617700)
chr3 (159-202)||(22321948-22321991)
chr3 (148-206)||(11863073-11863131)
chr3 (1-46)||(14576770-14576816)
chr3 (1-46)||(14972992-14973038)
chr3 (1-46)||(17487994-17488040)
chr3 (165-206)||(11557163-11557204)
chr3 (57-206)||(15051707-15051856)
chr3 (165-206)||(18383695-18383736)
chr3 (165-205)||(2897603-2897643)
chr3 (166-206)||(20723288-20723328)
[»] scaffold1124 (1 HSPs)
scaffold1124 (1-203)||(2013-2214)
[»] scaffold0671 (1 HSPs)
scaffold0671 (25-206)||(6264-6444)
[»] scaffold0324 (1 HSPs)
scaffold0324 (110-206)||(15646-15742)
[»] scaffold0297 (1 HSPs)
scaffold0297 (26-206)||(15447-15626)
[»] scaffold0555 (1 HSPs)
scaffold0555 (56-206)||(773-923)
[»] scaffold0042 (3 HSPs)
scaffold0042 (56-206)||(34688-34838)
scaffold0042 (159-206)||(64133-64180)
scaffold0042 (159-206)||(76017-76064)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-70)||(16418-16487)
[»] scaffold1895 (1 HSPs)
scaffold1895 (74-177)||(1034-1137)
[»] scaffold0761 (1 HSPs)
scaffold0761 (128-206)||(6087-6165)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-203)||(7427-7628)
scaffold0114 (1-70)||(15378-15447)
[»] scaffold0149 (2 HSPs)
scaffold0149 (26-206)||(3904-4082)
scaffold0149 (26-206)||(8335-8513)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-60)||(1425-1484)
scaffold0106 (1-60)||(7402-7461)
[»] scaffold0412 (1 HSPs)
scaffold0412 (128-206)||(6194-6272)
[»] scaffold0311 (1 HSPs)
scaffold0311 (56-206)||(6856-7006)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-70)||(965-1034)
[»] scaffold0111 (2 HSPs)
scaffold0111 (110-199)||(32679-32768)
scaffold0111 (159-206)||(8779-8826)
[»] scaffold0676 (1 HSPs)
scaffold0676 (150-206)||(4712-4768)
[»] scaffold0585 (1 HSPs)
scaffold0585 (159-207)||(9614-9662)
[»] scaffold0080 (1 HSPs)
scaffold0080 (150-206)||(18434-18490)
[»] scaffold0056 (1 HSPs)
scaffold0056 (150-206)||(13855-13911)
[»] scaffold0035 (1 HSPs)
scaffold0035 (56-191)||(46520-46655)
[»] scaffold0013 (1 HSPs)
scaffold0013 (159-206)||(2452-2499)
[»] scaffold0012 (1 HSPs)
scaffold0012 (159-206)||(24747-24794)
[»] scaffold0008 (2 HSPs)
scaffold0008 (160-206)||(2157-2203)
scaffold0008 (159-206)||(30523-30570)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-70)||(5044-5113)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-70)||(13634-13703)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-78)||(74-151)
scaffold0358 (1-78)||(4850-4927)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-70)||(32203-32272)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-70)||(51718-51787)
[»] scaffold0615 (1 HSPs)
scaffold0615 (150-206)||(1862-1918)
[»] scaffold0546 (2 HSPs)
scaffold0546 (159-207)||(2179-2227)
scaffold0546 (159-203)||(6039-6083)
[»] scaffold0371 (1 HSPs)
scaffold0371 (160-204)||(15618-15662)
[»] scaffold0109 (3 HSPs)
scaffold0109 (159-207)||(11080-11128)
scaffold0109 (159-206)||(45398-45445)
scaffold0109 (159-203)||(7224-7268)
[»] scaffold0107 (1 HSPs)
scaffold0107 (159-207)||(15196-15244)
[»] scaffold0023 (2 HSPs)
scaffold0023 (150-206)||(23445-23501)
scaffold0023 (26-177)||(38286-38436)
[»] scaffold1461 (1 HSPs)
scaffold1461 (159-206)||(209-256)
[»] scaffold1220 (1 HSPs)
scaffold1220 (159-206)||(2082-2129)
[»] scaffold0483 (1 HSPs)
scaffold0483 (159-206)||(611-658)
[»] scaffold0372 (1 HSPs)
scaffold0372 (159-202)||(4884-4927)
[»] scaffold0284 (1 HSPs)
scaffold0284 (159-202)||(18634-18677)
[»] scaffold0228 (1 HSPs)
scaffold0228 (159-206)||(18411-18458)
[»] scaffold0184 (1 HSPs)
scaffold0184 (159-206)||(4003-4050)
[»] scaffold0168 (1 HSPs)
scaffold0168 (159-206)||(3309-3356)
[»] scaffold0120 (1 HSPs)
scaffold0120 (159-206)||(19796-19843)
[»] scaffold0070 (1 HSPs)
scaffold0070 (159-206)||(10183-10230)
[»] scaffold0044 (3 HSPs)
scaffold0044 (159-206)||(19468-19515)
scaffold0044 (160-206)||(62541-62587)
scaffold0044 (165-206)||(13190-13231)
[»] scaffold0036 (1 HSPs)
scaffold0036 (159-206)||(66194-66241)
[»] scaffold0017 (3 HSPs)
scaffold0017 (159-206)||(56377-56424)
scaffold0017 (165-206)||(191059-191100)
scaffold0017 (166-206)||(192762-192802)
[»] scaffold0009 (1 HSPs)
scaffold0009 (159-206)||(228152-228199)
[»] scaffold0003 (4 HSPs)
scaffold0003 (159-206)||(71593-71640)
scaffold0003 (159-206)||(96886-96933)
scaffold0003 (165-206)||(413829-413870)
scaffold0003 (159-206)||(139990-140037)
[»] scaffold0034 (1 HSPs)
scaffold0034 (160-206)||(16442-16488)
[»] scaffold0439 (2 HSPs)
scaffold0439 (165-206)||(2214-2255)
scaffold0439 (165-206)||(10074-10115)
[»] scaffold0393 (1 HSPs)
scaffold0393 (165-206)||(1790-1831)
[»] scaffold0327 (1 HSPs)
scaffold0327 (165-206)||(576-617)
[»] scaffold0220 (1 HSPs)
scaffold0220 (12-205)||(4712-4904)
[»] scaffold0158 (2 HSPs)
scaffold0158 (165-206)||(3139-3180)
scaffold0158 (165-206)||(6805-6846)
[»] scaffold1326 (1 HSPs)
scaffold1326 (150-206)||(1268-1324)
[»] scaffold0198 (2 HSPs)
scaffold0198 (15-107)||(23995-24086)
scaffold0198 (170-206)||(26706-26742)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-70)||(47132-47200)
[»] scaffold0410 (1 HSPs)
scaffold0410 (159-206)||(11660-11707)
[»] scaffold0346 (1 HSPs)
scaffold0346 (159-206)||(15377-15424)
[»] scaffold0342 (1 HSPs)
scaffold0342 (159-206)||(7049-7096)
[»] scaffold0280 (1 HSPs)
scaffold0280 (159-206)||(19070-19117)
[»] scaffold0177 (1 HSPs)
scaffold0177 (159-206)||(13266-13313)
[»] scaffold0171 (1 HSPs)
scaffold0171 (159-206)||(35289-35336)
[»] scaffold0132 (1 HSPs)
scaffold0132 (159-206)||(36585-36632)
[»] scaffold0130 (2 HSPs)
scaffold0130 (159-206)||(5779-5826)
scaffold0130 (1-46)||(27968-28014)
[»] scaffold0037 (1 HSPs)
scaffold0037 (148-203)||(21350-21405)
[»] scaffold0028 (1 HSPs)
scaffold0028 (159-202)||(58501-58544)
[»] scaffold0010 (1 HSPs)
scaffold0010 (159-206)||(23496-23543)
[»] scaffold0001 (1 HSPs)
scaffold0001 (159-206)||(173570-173617)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-39)||(993-1031)
[»] scaffold1296 (1 HSPs)
scaffold1296 (148-206)||(673-731)
[»] scaffold0476 (2 HSPs)
scaffold0476 (168-206)||(5885-5923)
scaffold0476 (168-206)||(7080-7118)
[»] scaffold0193 (2 HSPs)
scaffold0193 (160-206)||(9701-9747)
scaffold0193 (1-46)||(13349-13395)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-39)||(167923-167961)
[»] scaffold1552 (1 HSPs)
scaffold1552 (165-206)||(639-680)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-45)||(3089-3134)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-70)||(10339-10408)
[»] scaffold0216 (1 HSPs)
scaffold0216 (165-206)||(16899-16940)
[»] scaffold0104 (2 HSPs)
scaffold0104 (153-206)||(2114-2167)
scaffold0104 (153-206)||(9796-9849)
[»] scaffold0015 (1 HSPs)
scaffold0015 (159-203)||(192098-192142)


Alignment Details
Target: chr8 (Bit Score: 115; Significance: 1e-58; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 21389435 - 21389237
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||| |||||||||||| ||||||||||| |||||||| |||||  |||||||||||    
T  21389435 tcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacatattacaattaacttcatatattggtctcattact 21389336  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctc 199  Q
    || ||||  |||||||| || |||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||||| |||| |||||||| |||||||    
T  21389335 acccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaagcgagagcatctgctc 21389237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 21395965 - 21395768
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    |||||||||||||||||||||||| || |||||||||| | |||||| |||||||||||| |||| |||||| ||||||||||||||| |||||||||||    
T  21395965 tcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctcattact 21395866  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    || ||||  |||||||| || |||| ||||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||| ||||||    
T  21395865 acccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcgagagcatctgct 21395768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 21790458 - 21790261
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    |||||||||||||||||||||||| || |||||||||| | |||||| |||||||||||| |||| |||||| ||||||||||||||| |||||||||||    
T  21790458 tcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctcattact 21790359  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    || ||||  |||||||| || |||| ||||||||||| ||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||| ||||||    
T  21790358 acccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcgagagcatctgct 21790261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 17353894 - 17353715
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| |||||| ||||||||||||||| ||||||||||||| ||||  |||||||| || | ||    
T  17353894 acatcatattcaacataaacatttcataa-cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcgaa 17353796  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      ||||||||||||||||| | |||||||||| ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  17353795 ttatgcgacacaaatcgcaatatcctcacttgcactcagttctgcaagtgctcgcgaggcgagagcatctgctcgccatgg 17353715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 19899257 - 19899436
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||| ||| ||| ||||||||| ||||  |||||||| || ||||    
T  19899257 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttaaataggtcacattactacccaagggtccatctctaatcaaa 19899355  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      |||||||||| ||||||   |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19899356 ttatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19899436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 16184877 - 16185069
Alignment:
Q  13 taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatcc 112  Q
    ||||||||| |  |||| ||||||||||| ||||| || ||| ||||| |||| ||| || ||||| ||||||||| ||| ||||||||| || |  |||    
T  16184877 taaacattaaatcacattataatcaacattaacatctcatat-cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtcc 16184975  T
Q  113 atctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| || ||||  ||||||||||  |||||   |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16184976 atctctaatcaaattatgcgacacaggtcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16185069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 23776816 - 23776617
Alignment:
Q  3 aagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattacta 101  Q
    |||||||||| | |||||||||  |||||||| ||||||||||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||||||    
T  23776816 aagtaatgcacataacattatataacatcatattcaacatcaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattacta 23776718  T
Q  102 cgcaagaatccatctccaaacaaaacatgcgacacaaat-cgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    |  |||  |||||||| || ||||  |||||||||| || |||| | ||||  |||| ||||| ||||| ||||||| ||||||||||||| ||||||||    
T  23776717 cctaagtgtccatctctaaccaaattatgcgacacagattcgcaatatcctagcttgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcg 23776618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 204
Target Start/End: Original strand, 19976654 - 19976784
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||||| ||| ||| |||||||||  | |  |||||||| || ||||  |||||||||| ||||||   |||||||||| ||||| |||||||||    
T  19976654 ttaacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaag 19976753  T
Q  174 tgctggcgaggcgagagcgtctgctcgccat 204  Q
    |||| ||||||||||||| ||||||||||||    
T  19976754 tgctcgcgaggcgagagcatctgctcgccat 19976784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 24755912 - 24756062
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||| || |||||| ||| ||||||||| ||||  |||||||| ||||||   ||||||||||  |||||   | ||||||    
T  24755912 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 24756011  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  24756012 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24756062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 19983255 - 19983434
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||| ||| ||| ||||||||| || |  |||||||| || ||||    
T  19983255 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttaaataggtcacattactacccagggttccatctctaatcaaa 19983353  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      |||||||||| ||||||   |||||| ||| ||||| || |||||||||| ||||||||||||| ||||||| ||||||    
T  19983354 ttatgcgacacagatcgcaacatcctcatttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcaccatgg 19983434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 21168705 - 21168499
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  ||||||| ||  ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| ||   ||||    
T  21168705 tcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggttatatta 21168607  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    |||| |||   |||||||| || ||||  |||||||||| ||||||   |||||||||| |||||  || ||||||||| ||||||||||||| ||||||    
T  21168606 ctacccaaaggtccatctctaatcaaactatgcgacacagatcgcaacatcctcacttgcactcagatcaggaagtgcttgcgaggcgagagcatctgct 21168507  T
Q  199 cgccatgg 206  Q
    ||||||||    
T  21168506 cgccatgg 21168499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 21162015 - 21161838
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| ||   |||||||| |||   |||||||| || ||||    
T  21162015 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaa 21161917  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccat 204  Q
      || ||||||| ||||||   |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  21161916 ctatacgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccat 21161838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16199628 - 16199559
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||| |||| ||||    
T  16199628 tcaagtaatgcataaacattatattacatcataatcaacaacaacatatcttatacagcttcacagatta 16199559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21778761 - 21778697
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacaca 65  Q
    |||||||||||||||||||||||| || |||||||||||| |||||| |||||||||||| ||||    
T  21778761 tcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 22113554 - 22113507
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  22113554 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22113507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 22135057 - 22135010
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  22135057 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22135010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 22166207 - 22166160
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  22166207 actcaattctggaagtgcttgcgaggcgagagcatctgctcgccatgg 22166160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 23846841 - 23846794
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  23846841 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23846794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 17055214 - 17055168
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  17055214 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17055168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 19259432 - 19259379
Alignment:
Q  153 acttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19259432 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19259379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31971394 - 31971447
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttat 54  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||| ||||||    
T  31971394 tcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttat 31971447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 20465873 - 20465817
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  20465873 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatgg 20465817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 22010513 - 22010457
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  22010513 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22010457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 15538728 - 15538775
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15538728 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15538775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 17828409 - 17828362
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17828409 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17828362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 20856250 - 20856203
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  20856250 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 20856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 24434063 - 24434016
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  24434063 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24434016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 39094767 - 39094720
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  39094767 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 39094720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 43252093 - 43252136
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  43252093 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 43252136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 30643127 - 30643069
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||| | ||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  30643127 tcctaacttgcattcaattctggaagtgctcgcgaggcaagagcatctgctcgccatgg 30643069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 32598959 - 32599005
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||    
T  32598959 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatgg 32599005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 32605491 - 32605537
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||    
T  32605491 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatgg 32605537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 15602836 - 15602795
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  15602836 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15602795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 15611288 - 15611247
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  15611288 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15611247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 23834453 - 23834498
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccat 204  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  23834453 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccat 23834498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45130980 - 45130911
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||||||||||  |||||||||||| || |||||  |||||| ||||| |||| ||||    
T  45130980 tcaagtaatgcataaacattatatcacatcataatcatcaacaacaaatcttatacagcttcacagatta 45130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 377572 - 377619
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||| ||||||| ||||||||||||||    
T  377572 actcagttctggaagtgctcgcgagacgagagcatctgctcgccatgg 377619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 15532168 - 15532215
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| |||||||| |||||    
T  15532168 actcagttctggaagtgctcgcgaggcgagagcatctgctcggcatgg 15532215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 16231301 - 16231254
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  16231301 actcagttctggaagtgctcgcgaggcgagagcatcttctcgccatgg 16231254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 16861152 - 16861105
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  16861152 actcagttctggaagtgctcgcgaggcgagagcatctactcgccatgg 16861105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 19278109 - 19278066
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  19278109 actcaattctgaaagtgctcgcgaggcgagagcatctgctcgcc 19278066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 21972410 - 21972367
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||    
T  21972410 actcaattctggaagtgctcgcggggcgagagcatctgctcgcc 21972367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 21976495 - 21976452
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||    
T  21976495 actcaattctggaagtgctcgcggggcgagagcatctgctcgcc 21976452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 22028837 - 22028884
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| |||||| |||||||    
T  22028837 actcagttctggaagtgctcgcgaggcgagagcatctgcttgccatgg 22028884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 22045145 - 22045184
Alignment:
Q  166 tctggaagtgctggcgaggcgagagcgtctgctcgccatg 205  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  22045145 tctggaagtgctcgcgaggcgagagcatctgctcgccatg 22045184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 18619758 - 18619804
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatg 205  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||||    
T  18619758 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatg 18619804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 17926526 - 17926485
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||| |||||| ||||||||||||| ||||||||||||||    
T  17926526 ttctgggagtgctcgcgaggcgagagcatctgctcgccatgg 17926485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21918982 - 21918937
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaaca 46  Q
    |||||||||||||||||||||||  |||||||||||| || |||||    
T  21918982 tcaagtaatgcataaacattatatcacatcataatcagcagcaaca 21918937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 3e-53; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 40622190 - 40621986
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| || ||  ||||| |||| ||| || ||||||||||||||| |||||||||||    
T  40622190 tcaagtaatgcataaacattataatacatcataatcaacacaaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcattact 40622092  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    || ||||  |||||||| |||||||| |||||| ||| |||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||    
T  40622091 acccaagggtccatctctaaacaaaatatgcgaaacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcg 40621992  T
Q  201 ccatgg 206  Q
    ||||||    
T  40621991 ccatgg 40621986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 75 - 206
Target Start/End: Original strand, 23038245 - 23038376
Alignment:
Q  75 taacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagt 174  Q
    |||||||||||||| |||||| |||||| ||||  |||||||| || |||| ||||||||||| |||||| |||||||||||| ||||| ||||||||||    
T  23038245 taacttcttatataggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacagatcgcaatttcctcacttgcactcagttctggaagt 23038344  T
Q  175 gctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||  |||||||||||| ||||||||||||||    
T  23038345 gctcacgaggcgagagcatctgctcgccatgg 23038376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 202
Target Start/End: Complemental strand, 22740870 - 22740742
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| |||||||||    
T  22740870 ttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaag 22740771  T
Q  174 tgctggcgaggcgagagcgtctgctcgcc 202  Q
    |||| ||||||||||||| ||||||||||    
T  22740770 tgctcgcgaggcgagagcatctgctcgcc 22740742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 22758699 - 22758493
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  ||| |||||||  |||||||| ||||||| ||||| || ||  ||||| || | ||| || |||| |||||||||| |||||||||    
T  22758699 tcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-cagcttcatagattgcagttaatttcttatataggtctcatta 22758601  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    |||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| ||||| |||||||  |||||||||||| ||||||    
T  22758600 ctacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatctgct 22758501  T
Q  199 cgccatgg 206  Q
    ||||||||    
T  22758500 cgccatgg 22758493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 206
Target Start/End: Complemental strand, 22799094 - 22798904
Alignment:
Q  15 aacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccat 114  Q
    |||||||||  |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||||||| || |  |||||    
T  22799094 aacattatatcacatcatattcaacattaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattactacccaggggtccat 22798996  T
Q  115 ctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||| || ||||  |||||||||| |||||| | |||| ||||| ||| | ||||||||||||| ||||||||||||| ||||||||||||||    
T  22798995 ctctaatcaaattatgcgacacagatcgcaatatcctaacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22798904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 206
Target Start/End: Complemental strand, 23019615 - 23019484
Alignment:
Q  75 taacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagt 174  Q
    |||||||||||||| ||| ||||||||| ||||  |||| ||| ||  |||  |||||||||| |||||| | |||| ||||| ||||| ||||||||||    
T  23019615 taacttcttatataggtcacattactacccaagggtccaactctaattaaattatgcgacacagatcgcaatatcctgacttgcactcagttctggaagt 23019516  T
Q  175 gctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||| ||||||||||||| ||| ||||||||||    
T  23019515 gctcgcgaggcgagagcatctactcgccatgg 23019484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20309244 - 20309313
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||| ||||    
T  20309244 tcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 20309313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 23101093 - 23101008
Alignment:
Q  121 acaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||| | |||||||| |||||||||| ||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  23101093 acaaatcatgcgacatagatcgcattatcctcacttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatgg 23101008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38098 - 38039
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagct 60  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||||    
T  38098 tcaagtaatgcataaacattatatcacatcataatcaacaacaacatgtcttatacagct 38039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 15477884 - 15477931
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  15477884 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15477931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 19928328 - 19928281
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  19928328 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19928281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 26125484 - 26125530
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  26125484 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatgg 26125530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 41667230 - 41667276
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  41667230 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatgg 41667276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 25963540 - 25963495
Alignment:
Q  161 tcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  25963540 tcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 25963495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 45678065 - 45677933
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||| || |||||| ||| |||||||||  |||| |||||| | || |||  ||||||||||| ||| ||   | |||| ||| ||||| |||||||||    
T  45678065 ttaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcactcagttctggaag 45677966  T
Q  174 tgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||  |||||||||||| ||||||||||||||    
T  45677965 tgctcacgaggcgagagcatctgctcgccatgg 45677933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 12901338 - 12901295
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  12901338 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 12901295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 22461016 - 22460969
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  22461016 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22460969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 24649637 - 24649680
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  24649637 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 24649680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 27379258 - 27379215
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27379258 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 27379215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 27383304 - 27383261
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27383304 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 27383261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 27602077 - 27602120
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27602077 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 27602120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 41530835 - 41530792
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  41530835 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 41530792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 21918152 - 21918094
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21918152 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21918094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 24673839 - 24673917
Alignment:
Q  128 atgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||| ||||||   |||| ||||| | ||| || |||||||||| ||||||||||||| ||||||||||||||    
T  24673839 atgcgacacagatcgcaacatcctaacttgcattcagttgtggaagtgctcgcgaggcgagagcatctgctcgccatgg 24673917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 24175097 - 24175138
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  24175097 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24175138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 24655158 - 24655117
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  24655158 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24655117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 25961354 - 25961313
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  25961354 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 25961313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 37524964 - 37525005
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  37524964 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 37525005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 40428762 - 40428803
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  40428762 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 40428803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 44370133 - 44370077
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||| ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  44370133 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatgg 44370077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 23187355 - 23187402
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  23187355 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 23187402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 23598618 - 23598665
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  23598618 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 23598665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 24628304 - 24628261
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  24628304 actcaattctgaaagtgctcgcgaggcgagagcatctgctcgcc 24628261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22337253 - 22337306
Alignment:
Q  1 tcaagtaatgcata-aacattataatacatcataatcaacatcaacatgtctta 53  Q
    ||||||||||| || |||||||||  |||||||||||||||||||||| |||||    
T  22337253 tcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatctta 22337306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 24735689 - 24735730
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||    
T  24735689 ttctggaagtgctcgcgaggcgagagcatctgctcaccatgg 24735730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 24716345 - 24716309
Alignment:
Q  170 gaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  24716345 gaagtgctcgcgaggcgagagcatctgctcgccatgg 24716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 26960 - 27164
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| || ||  ||||| |||| ||| || |||||||||||||||||||||||||||    
T  26960 tcaagtaatgcataaacattataatacatcataatcaacacaaacatctcataa-cagcttcacagattgcagttaacttcttatatatgtctcattact 27058  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    || ||||  |||||||| |||||||| || ||| ||| |||||| | |||||||||| ||||| |||||||| |||| ||||||| ||||| ||||||||    
T  27059 acccaagggtccatctctaaacaaaatattcgaaacagatcgcaatatcctcacttgcactcagttctggaaatgcttgcgaggcaagagcatctgctcg 27158  T
Q  201 ccatgg 206  Q
    ||||||    
T  27159 ccatgg 27164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 21714685 - 21714891
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  |||||||||||  |||||||| ||||||  ||||| || ||  ||||| |||| ||| || ||||||||||||||| |||||||||    
T  21714685 tcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcatta 21714783  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    |||| ||||  |||||||| || |||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  21714784 ctacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgct 21714883  T
Q  199 cgccatgg 206  Q
    ||||||||    
T  21714884 cgccatgg 21714891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 21788023 - 21787820
Alignment:
Q  3 aagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattacta 101  Q
    |||||||||| | |||||||||  |||||||||||||||||||||| || ||  ||||| || | ||| || ||||||||||||||| ||  ||||||||    
T  21788023 aagtaatgcacataacattatataacatcataatcaacatcaacatttcataa-cagctgcatagattgcagttaacttcttatataggttacattacta 21787925  T
Q  102 cgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgc 201  Q
    | ||||  |||||||| ||||||   ||||||||||  |||||  || |||||||| ||||| ||||| ||||||| ||||||||||||| |||||||||    
T  21787924 cccaagggtccatctctaaacaagttatgcgacacaggtcgcaaatttctcacttgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgc 21787825  T
Q  202 catgg 206  Q
    |||||    
T  21787824 catgg 21787820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 206
Target Start/End: Complemental strand, 42865139 - 42864989
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||| ||||||||| ||| ||||||||| ||||  |||||||| || ||||  |||||||||| ||||||   ||||||||    
T  42865139 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 42865040  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  42865039 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 42864989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 56 - 206
Target Start/End: Complemental strand, 20091401 - 20091251
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||||||||| ||| ||||||||||||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||| |    
T  20091401 cagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccatctcaaatcaaattatgcgacacagatcgcaatatcctcatt 20091302  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| |||||| |||| | ||||||||||||||    
T  20091301 tgcactcagttctggaagtgctcgcgaggtgagaacatctgctcgccatgg 20091251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 206
Target Start/End: Complemental strand, 22831306 - 22831156
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||| || |||||| ||| |||||||||  |||| |||||| | ||||||  ||||||||||| ||||||   | |||| |    
T  22831306 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatcgcaacattctcaat 22831207  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||| ||||||||| ||||||||||||| ||||||||||||||    
T  22831206 tgcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatgg 22831156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38801373 - 38801304
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||| |||| ||||    
T  38801373 tcaagtaatgcataaacattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaatta 38801304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 204
Target Start/End: Complemental strand, 18182031 - 18181901
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||||||| | ||| |||||||||  |||| |||||| | || |||   |||||||||| ||||||   |||| ||||| ||||| |||||||||    
T  18182031 ttaacttcttatacaagtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaacttgcactcagttctggaag 18181932  T
Q  174 tgctggcgaggcgagagcgtctgctcgccat 204  Q
    |||| || |||||||||| ||||||||||||    
T  18181931 tgctcgcaaggcgagagcatctgctcgccat 18181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 199
Target Start/End: Complemental strand, 22468590 - 22468481
Alignment:
Q  90 gtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgaga 189  Q
    |||||| |||||| ||||  |||||||| || | ||  |||||||||| |||||| |  ||||||||| ||||| ||||||||||||| |||||||||||    
T  22468590 gtctcaatactacccaagggtccatctctaatcgaattatgcgacacatatcgcaataccctcacttgcactcagttctggaagtgctcgcgaggcgaga 22468491  T
Q  190 gcgtctgctc 199  Q
    || |||||||    
T  22468490 gcatctgctc 22468481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 6152046 - 6152193
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||| || |||||| ||| |||||||||  |||| |||||| | || |||  ||||||||||| ||||||   |||| ||     
T  6152046 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgcaacatcctaaca 6152145  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 203  Q
    || | ||| ||||||||||||| ||||||||||||| |||||||||||    
T  6152146 tgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgcca 6152193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 21615718 - 21615764
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  21615718 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21615764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 48603652 - 48603754
Alignment:
Q  1 tcaagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattac 99  Q
    |||||||||||||||| |||||||  ||||||||||||||| |||||  |||||  ||||| |||| |||| | ||||||||||||||| ||| || |||    
T  48603652 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatac 48603751  T
Q  100 tac 102  Q
    |||    
T  48603752 tac 48603754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 20138364 - 20138409
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatg 205  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||    
T  20138364 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatg 20138409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 21022923 - 21022979
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||| ||||| | ||||||||||||| ||||||||||||| ||||||||||||||    
T  21022923 ctcactagtactgagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21022979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 22449100 - 22449044
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  22449100 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22449044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 12647149 - 12647196
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  12647149 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12647196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 16080270 - 16080223
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16080270 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16080223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 16375283 - 16375240
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  16375283 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 16375240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 17678413 - 17678366
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17678413 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17678366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 21305594 - 21305641
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21305594 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21305641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 21407636 - 21407679
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  21407636 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 21407679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 33797813 - 33797860
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  33797813 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 33797860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 36819134 - 36819087
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  36819134 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 36819087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 45489569 - 45489522
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  45489569 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 45489522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 46975747 - 46975794
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  46975747 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 46975794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 52639822 - 52639865
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  52639822 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 52639865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 3472745 - 3472704
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  3472745 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 3472704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 19212147 - 19212195
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 207  Q
    ||||| || |||||||||| ||||||||||||| |||||||||||||||    
T  19212147 actcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggt 19212195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 8761458 - 8761411
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||| | ||||||||||||| ||||||||||||||    
T  8761458 actcagttctggaagtgttcgcgaggcgagagcatctgctcgccatgg 8761411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 20228635 - 20228588
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||| ||||||||||||| | ||||||||||||    
T  20228635 actcaattctggatgtgctcgcgaggcgagagcatttgctcgccatgg 20228588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 23819125 - 23819078
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  23819125 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 23819078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 24782926 - 24782879
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  24782926 actcagttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 24782879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 45310192 - 45310145
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  45310192 actcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatgg 45310145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 33049907 - 33049866
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| |||||| |||||||    
T  33049907 ttctggaagtgctcgcgaggcgagagcatctgcttgccatgg 33049866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 18154820 - 18154614
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  |||||||||||   ||||||| ||||||| ||||| || ||  ||||| |||||||| || ||||||||||||||| |||||||||    
T  18154820 tcaagtaatgcaattaaacattatatcgcatcatattcaacattaacatctcataa-cagcttcacatattgcagttaacttcttatataggtctcatta 18154722  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    |||| |||   |||||||  || |||| ||||||||||| ||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  18154721 ctacccaatggtccatctttaatcaaatcatgcgacacagatcgcatttccctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgct 18154622  T
Q  199 cgccatgg 206  Q
    ||||||||    
T  18154621 cgccatgg 18154614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 17138045 - 17137841
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||| || || |||||| |||| ||| || ||||||||||||||| |||||||||||    
T  17138045 tcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttcacagattgcagttaacttcttatataggtctcattact 17137947  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  |||  |||||| | || |||  || || ||||| ||| ||   | |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||    
T  17137946 acctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcg 17137847  T
Q  201 ccatgg 206  Q
    ||||||    
T  17137846 ccatgg 17137841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 9703429 - 9703608
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||||||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||| ||| ||||  |||||||| || ||||    
T  9703429 acatcataatcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaa 9703527  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      |||||||||  |||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  9703528 ttatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 9703608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 12187151 - 12187352
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    ||||||||||||||||||||||||||||||||| |||||   ||||| ||||| |||||| |||| ||| || ||||||||||||||| |||||||||||    
T  12187151 tcaagtaatgcataaacattataatacatcatattcaactcaaacatctctta-tcagcttcacagattgcagttaacttcttatataggtctcattact 12187249  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  ||   |||||||| || |||  || || ||| | ||| |  | | |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||    
T  12187250 acctaatggtccatctctaatcaattcaagcaacatatatcactatattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcg 12187349  T
Q  201 cca 203  Q
    |||    
T  12187350 cca 12187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 11880456 - 11880594
Alignment:
Q  68 ttacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattc 167  Q
    ||||| ||||| ||||||||| ||| ||||||||| ||||  |||||||| || ||||  |||||||||| ||||||   |||||||||| ||||| |||    
T  11880456 ttacagttaacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcagttc 11880555  T
Q  168 tggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||  |||||||||||| ||||||||||||||    
T  11880556 tggaagtgctcacgaggcgagagcatctgctcgccatgg 11880594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 24054618 - 24054810
Alignment:
Q  13 taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatcc 112  Q
    ||||||| |||  |||||||||||||||  ||||| || ||  ||||| |||| ||| || |||||| |||||||| ||||||||||||| ||||  |||    
T  24054618 taaacatcatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaactccttatataggtctcattactacccaagggtcc 24054716  T
Q  113 atctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| || | ||  |||||||||| |||||| | | |||||||  ||||| ||||||||||||| || || ||||||| ||||||||||||||    
T  24054717 atctctaatcgaattatgcgacacagatcgcaatattctcactttcactcagttctggaagtgctcgcaagacgagagcatctgctcgccatgg 24054810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 19649394 - 19649262
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||| || || |||||| |||||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||||||  ||||  |||||||||    
T  19649394 ttaacttctaatttaggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttacactcggttctggaag 19649295  T
Q  174 tgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||| ||||||| ||||||||||||||    
T  19649294 tgctcgcgagacgagagcatctgctcgccatgg 19649262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27847815 - 27847746
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||| |||||||||||| |||| ||||    
T  27847815 tcaagtaatgcataaacattatcacacatcataatcaacaacaacatatcttattcagcttcacagatta 27847746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 12321652 - 12321520
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||| ||||||||| ||| |||||||||  |||| |||||| | || |||  ||||||||||| |||||    | |||| ||| ||||| |||||||||    
T  12321652 ttaacatcttatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgctacattctcatttgcactcagttctggaag 12321553  T
Q  174 tgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||||||||||| ||||||||||||||    
T  12321552 tgctcgcgaggcgagagcatctgctcgccatgg 12321520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 10508918 - 10508860
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  10508918 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 10508860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 13149434 - 13149481
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  13149434 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 13149481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40443528 - 40443597
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||||||||||  ||||||||||||||| | |||| |||||| ||||| |||| ||||    
T  40443528 tcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 40443597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 6801492 - 6801539
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  6801492 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 6801539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 12718949 - 12718992
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  12718949 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 12718992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 12723860 - 12723903
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  12723860 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 12723903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 16907026 - 16906983
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  16907026 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 16906983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 18279684 - 18279727
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  18279684 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 18279727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 18283647 - 18283690
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  18283647 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 18283690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 48593282 - 48593235
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  48593282 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 48593235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 16275772 - 16275818
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||    
T  16275772 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatgg 16275818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 9445978 - 9445937
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  9445978 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 9445937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 14430179 - 14430220
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  14430179 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 14430220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 18557257 - 18557298
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  18557257 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18557298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 13462041 - 13462089
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 207  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||||||    
T  13462041 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggt 13462089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 18884 - 18837
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||    
T  18884 actcagttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 18837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 2760413 - 2760468
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatg 205  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| ||| |||||||||    
T  2760413 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatg 2760468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 9593625 - 9593672
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||| ||||    
T  9593625 actcagttctggaagtgctcgcgaggcgagagcatctgctcgctatgg 9593672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 9644588 - 9644635
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||| ||||    
T  9644588 actcagttctggaagtgctcgcgaggcgagagcatctgctcgctatgg 9644635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 11312928 - 11312975
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| |||||||||||||  |||||||||||| ||||||||||||||    
T  11312928 actcagttctggaagtgctcccgaggcgagagcatctgctcgccatgg 11312975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 11987492 - 11987539
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| | ||||||||||||    
T  11987492 actcagttctggaagtgctcgcgaggcgagagcatttgctcgccatgg 11987539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 12715145 - 12715188
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  12715145 actcaattctggaagtgctcgcgaggcaagagcatctgctcgcc 12715188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 13635295 - 13635248
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| |||| |||||||||    
T  13635295 actcagttctggaagtgctcgcgaggcgagagcatctgttcgccatgg 13635248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 15580971 - 15581018
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  15580971 actcagttttggaagtgctcgcgaggcgagagcatctgctcgccatgg 15581018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 15728604 - 15728651
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  15728604 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 15728651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 16114522 - 16114565
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||    
T  16114522 actcaattctggaagtgctcgcgaggcgagagcatttgctcgcc 16114565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 16117675 - 16117718
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||    
T  16117675 actcaattctggaagtgctcgcgaggcgagagcatttgctcgcc 16117718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16386230 - 16386147
Alignment:
Q  1 tcaagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttctt 83  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||  |||||  ||||| |||| |||| | ||||| ||||    
T  16386230 tcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacagattatagttaacctctt 16386147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 16438860 - 16438813
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||| ||||||||| ||||||||||||| ||||||||||||||    
T  16438860 actcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatgg 16438813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 26292675 - 26292722
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||| ||||||||||||| | ||||||||||||    
T  26292675 actcaattctggatgtgctcgcgaggcgagagcatttgctcgccatgg 26292722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 12318407 - 12318452
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccat 204  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||    
T  12318407 actcagttctggaagtgctcgcgaggcaagagcatctgctcgccat 12318452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 20569416 - 20569375
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  20569416 ttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 20569375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 35151888 - 35151932
Alignment:
Q  162 caattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| |||||||||| ||||||||||||| ||||||| ||||||    
T  35151888 caattttggaagtgctcgcgaggcgagagcatctgctcaccatgg 35151932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 39722546 - 39722578
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagc 191  Q
    ||||||||||||||||||| |||||||||||||    
T  39722546 actcaattctggaagtgctcgcgaggcgagagc 39722578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 36593 - 36799
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  |||||||||||  |||||||| ||||||  ||||| || ||  ||||| |||| ||| || ||||||||||| ||| |||||||||    
T  36593 tcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttaaataggtctcatta 36691  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    |||| ||||  ||| |||| ||||||| ||||||||||| |||| |||||||||||||| ||||| |||| |||||||| ||||||||||||| ||||||    
T  36692 ctacccaagggtccttctctaaacaaatcatgcgacacagatcgtattttcctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgct 36791  T
Q  199 cgccatgg 206  Q
    ||||||||    
T  36792 cgccatgg 36799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 8914 - 8735
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||| ||||||||||||| || ||  ||||| |||| |||||| ||||||||||||||| ||||||||||||| ||||  |||||||| || | ||    
T  8914 acatcatattcaacatcaacatttcataa-cagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctctaatcgaa 8816  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      ||||||||||  ||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  8815 ttatgcgacacaggtcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 8735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 69931 - 70137
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  ||| |||||||  |||||||| ||||||  ||||| || ||  ||||| |||| ||| || ||||||||||||||| |||||||||    
T  69931 tcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcatta 70029  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    |||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  70030 ctacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgct 70129  T
Q  199 cgccatgg 206  Q
    ||||||||    
T  70130 cgccatgg 70137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 10410 - 10363
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  10410 actcatttcttgaagtgctcgcgaggcgagagcatctgctcgccatgg 10363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 22032453 - 22032654
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||| || || |||||| |||| ||| || ||||||||||||||| |||||||||||    
T  22032453 tcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgta-tcagcttcacagattgcagttaacttcttatataggtctcattact 22032551  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  |||  |||||||| || |||  || || ||||| ||| ||   | |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||    
T  22032552 acctaagggtccatctctaatcaattcaagcaacacatatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcg 22032651  T
Q  201 cca 203  Q
    |||    
T  22032652 cca 22032654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 26704257 - 26704407
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||||||||||||||||||||||||||| ||||  |||||| | || |||| ||||||||||| ||| ||||||||| |||    
T  26704257 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26704356  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| ||||||||| ||| ||||||||||||||    
T  26704357 tgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatgg 26704407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 26973990 - 26974140
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||||||||||||||||||||||||||| ||||  |||||| | || |||| ||||||||||| ||| ||||||||| |||    
T  26973990 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26974089  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| ||||||||| ||| ||||||||||||||    
T  26974090 tgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatgg 26974140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 37724039 - 37724245
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  |||||||||||  |||||||| ||||||  ||||| ||  |  ||||| |||| ||| || ||||||||||||||| |||||| ||    
T  37724039 tcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcaaaa-cagcttcacagattgcagttaacttcttatataggtctcaata 37724137  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    ||||  |||  |||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  37724138 ctaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatctcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgct 37724237  T
Q  199 cgccatgg 206  Q
    ||||||||    
T  37724238 cgccatgg 37724245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 21873387 - 21873590
Alignment:
Q  3 aagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattacta 101  Q
    |||||||||| | |||||||||  |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||||||    
T  21873387 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattacta 21873485  T
Q  102 cgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgc 201  Q
    | ||||  | |||||| || ||||  |||||||||| ||| || | |||| ||||| ||||| ||||| ||||||| ||||||||||||| |||||||||    
T  21873486 cccaagggttcatctctaatcaaattatgcgacacagatctcaatatcctaacttgcactcagttctgtaagtgctcgcgaggcgagagcatctgctcgc 21873585  T
Q  202 catgg 206  Q
    |||||    
T  21873586 catgg 21873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 23201559 - 23201710
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgc-aagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcac 154  Q
    ||||| |||| ||| || |||||||||| |||| ||||||||||||| | |||  |||||||| |||||||  |||||||||| |||||| | |||||||    
T  23201559 cagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaattatgcgacacagatcgcaatatcctcac 23201658  T
Q  155 ttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||| ||||| ||||  ||||||| ||||||||||||| ||||||||||||||    
T  23201659 ttgcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatgg 23201710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18769986 - 18769785
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||| || || |||||| |||| ||| || ||||||||||||||| |||||||||||    
T  18769986 tcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttcacagattgcagttaacttcttatataggtctcattact 18769888  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  |||  |||||| | || |||  || || ||||| ||| |    | ||||||||  |||| ||||||||||||| |||| |||||||| ||||||||    
T  18769887 acctaagggtccatccctaatcaattcaagcaacacagatcactacattctcacttgcgctcagttctggaagtgctcgcgacgcgagagcatctgctcg 18769788  T
Q  201 cca 203  Q
    |||    
T  18769787 cca 18769785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 23572216 - 23572420
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    |||||||||||||||||||||||||||||||||||||||   ||||| || || ||| || |||| ||| || ||||||||||||||| |||||||||||    
T  23572216 tcaagtaatgcataaacattataatacatcataatcaactcaaacatctcata-tcaacttcacaaattgcagttaacttcttatataggtctcattact 23572314  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  |||  |||||| | || |||  || || ||  | ||| ||   | |||||||| ||||| ||||||||||||  ||||||||||||| ||||||||    
T  23572315 acctaagggtccatccctaatcaattcaagcaacttagatcacaacattctcacttgcactcagttctggaagtgcgcgcgaggcgagagcatctgctcg 23572414  T
Q  201 ccatgg 206  Q
    ||||||    
T  23572415 ccatgg 23572420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 206
Target Start/End: Complemental strand, 23501273 - 23501123
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| || |||   || ||||||| ||||||   | ||||||    
T  23501273 cagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctctaatcaacttatacgacacagatcgcaacattctcact 23501174  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |  ||||| ||||||||||||| |||||| |||||| ||||||||||||||    
T  23501173 ttcactcagttctggaagtgctcgcgaggtgagagcatctgctcgccatgg 23501123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 14079340 - 14079489
Alignment:
Q  57 agctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcactt 156  Q
    |||| |||| ||| || ||||||||||| ||| ||| ||||||||| || |  |||||||| || ||||  |||||||||| ||||||   |||||||||    
T  14079340 agcttcacagattgcagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcactt 14079439  T
Q  157 gtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    | ||||| |||| |||||||| ||||||||||||| | ||||||||||||    
T  14079440 gcactcagttctagaagtgctcgcgaggcgagagcatttgctcgccatgg 14079489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 23512318 - 23512448
Alignment:
Q  76 aacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtg 175  Q
    ||||||||||||| |||  | |||||| ||||  |||| ||| || ||||  |||||||||| ||||||   |||| || || ||||| |||||||||||    
T  23512318 aacttcttatataggtcataatactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacatcctaacatgcactcagttctggaagtg 23512417  T
Q  176 ctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||||||||||| ||||||||||||||    
T  23512418 ctcgcgaggcgagagcatctgctcgccatgg 23512448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 123131 - 123084
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  123131 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 123084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 21885015 - 21884968
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  21885015 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21884968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 26172744 - 26172791
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  26172744 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 26172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 26680870 - 26680917
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26680870 actcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatgg 26680917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 26952477 - 26952524
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26952477 actcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatgg 26952524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 12028391 - 12028344
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  12028391 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12028344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 16674432 - 16674479
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16674432 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16674479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 17410727 - 17410774
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17410727 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17410774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 17918977 - 17918930
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17918977 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17918930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 18356607 - 18356654
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  18356607 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18356654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 19472545 - 19472502
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  19472545 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 19472502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 20232830 - 20232877
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  20232830 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 20232877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 20296128 - 20296171
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  20296128 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 20296171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 20910626 - 20910579
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  20910626 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 20910579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 21340593 - 21340546
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21340593 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21340546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 23451637 - 23451684
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23451637 actcagttctggaagtgcttgcgaggcgagagcatctgctcgccatgg 23451684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 23463142 - 23463189
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23463142 actcagttctggaagtgcttgcgaggcgagagcatctgctcgccatgg 23463189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 23535415 - 23535368
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23535415 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23535368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 26665957 - 26665910
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  26665957 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 26665910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 26937554 - 26937507
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  26937554 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 26937507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 42805700 - 42805746
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatg 205  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  42805700 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatg 42805746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21292952 - 21292899
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttat 54  Q
    |||||||||||||||||||||||  |||||||||||| || |||||| ||||||    
T  21292952 tcaagtaatgcataaacattatatcacatcataatcatcaacaacatatcttat 21292899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 21366485 - 21366444
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  21366485 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 24222174 - 24222215
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  24222174 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 24222215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 31342403 - 31342444
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  31342403 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 31342444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 1858802 - 1858755
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||    
T  1858802 actcagttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 1858755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22075157 - 22075240
Alignment:
Q  1 tcaagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttctt 83  Q
    |||||||||||||||| |||||||  ||||||||||||||| |||||  |||||  ||||| ||||||||| | ||||| ||||    
T  22075157 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctctt 22075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 23458881 - 23458928
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  23458881 actcagttcttgaagtgcttgcgaggcgagagcatctgctcgccatgg 23458928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 25229232 - 25229185
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  25229232 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 25229185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 25293388 - 25293341
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  25293388 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 25293341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 22757416 - 22757458
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgc 201  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||    
T  22757416 actcagttctggaagtgctcgcgaggcgagagcatctgctcgc 22757458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1096605 - 1096650
Alignment:
Q  1 tcaagtaatgcata-aacattataatacatcataatcaacatcaac 45  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||    
T  1096605 tcaagtaatgcatataacattatatcacatcataatcaacatcaac 1096650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 17718259 - 17718218
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| || |||||||||||    
T  17718259 ttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 17718218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 18774490 - 18774531
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| || |||||||||||    
T  18774490 ttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 18774531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 20805847 - 20805888
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  20805847 ttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 20805888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 21887124 - 21887165
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||    
T  21887124 ttctgtaagtgctcgcgaggcgagagcatctgctcgccatgg 21887165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 4e-34; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 15121785 - 15121581
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    |||||||||||||||||||||||||||||||||||||||   ||||| || || |||||  |||| ||| || ||||||||||||||| |||||||||||    
T  15121785 tcaagtaatgcataaacattataatacatcataatcaactcaaacatctcata-tcagcctcacagattgcagttaacttcttatataggtctcattact 15121687  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  ||   ||||| || ||||||   || ||||||| ||||||   | |||||||| ||||||||||||||||||| ||||||||||||| |||||||     
T  15121686 acctaatggtccatgtctaaacaagttattcgacacagatcgcaaagttctcacttgcactcaattctggaagtgctcgcgaggcgagagcatctgctca 15121587  T
Q  201 ccatgg 206  Q
    ||||||    
T  15121586 ccatgg 15121581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 13569674 - 13569853
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||| ||| ||||  |||||||| || ||||    
T  13569674 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaa 13569772  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      |||||||||  |||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  13569773 ttatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 13569853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 23843631 - 23843819
Alignment:
Q  17 cattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatct 116  Q
    ||||| || |||| ||||||||||| ||||| || ||  ||||| |||| ||| || ||||| ||||||||| ||| |||||| || ||||  |||||||    
T  23843631 cattaaaacacattataatcaacattaacatttcataa-cagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccatct 23843729  T
Q  117 ccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    | || ||||  |||||||||| ||||||   |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23843730 ctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23843819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 15093911 - 15094114
Alignment:
Q  3 aagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattacta 101  Q
    |||||||||| | |||||||||  |||||||| ||||||| ||||| || ||  ||||| || | ||| || ||||||||||||||| ||| ||||||||    
T  15093911 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcagagattgcagttaacttcttatataggtcacattacta 15094009  T
Q  102 cgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgc 201  Q
      ||||  |||||||| || ||||  |||||||||| |||||| | |||| ||||| ||||| || |||||||||| ||||||||||||| || ||||||    
T  15094010 accaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcactcagttttggaagtgctcgcgaggcgagagcatcagctcgc 15094109  T
Q  202 catgg 206  Q
    |||||    
T  15094110 catgg 15094114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 44675794 - 44675973
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||| ||| ||| |||||||||  | |  |||||||| || ||||    
T  44675794 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttaaataggtcacattactacctaggggtccatctctaatcaaa 44675892  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      |||||||||| ||||||   |||||||||| ||||| ||||||||||||| |||||| |||||| ||||||||||||||    
T  44675893 ttatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggtgagagcatctgctcgccatgg 44675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 12570212 - 12570362
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||| || |||||| ||| ||||||||| ||||  |||||||| ||||||   ||||||||||  |||||   | ||||||    
T  12570212 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 12570311  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  12570312 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12570362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 15125028 - 15124932
Alignment:
Q  110 tccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||| |||||||  |||||||||| |||| | | |||||||||| ||||| ||||||||||||| ||||||||||||| |||||| |||||||    
T  15125028 tccaactctaaacaaattatgcgacacatatcgaaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatgg 15124932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17046623 - 17046692
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||| ||||||||||||| ||||| ||||||||| |||||| |||||||||||| |||| ||||    
T  17046623 tcaagtaatgtataaacattataacacatcttaatcaacaacaacatatcttattcagcttcacagatta 17046692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 2015058 - 2015105
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  2015058 actcaattctggaagtgctcgcgaggcgagagcgtctgctcaccatgg 2015105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 9556810 - 9556857
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  9556810 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 9556857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14053284 - 14053231
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttat 54  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||| ||||||    
T  14053284 tcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttat 14053231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 19757429 - 19757380
Alignment:
Q  157 gtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19757429 gtactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19757380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 19782377 - 19782426
Alignment:
Q  157 gtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19782377 gtactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19782426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 4561159 - 4561116
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  4561159 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 4561116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 5756763 - 5756720
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  5756763 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 5756720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 11250387 - 11250340
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  11250387 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 11250340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 15353132 - 15353085
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15353132 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15353085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 16243222 - 16243179
Alignment:
Q  163 aattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  16243222 aattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16243179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 18222204 - 18222157
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||    
T  18222204 actcaattctggaagtgctcgcgaggcgagagcatcagctcgccatgg 18222157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 26243491 - 26243444
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  26243491 actcagttctggaagtgcttgcgaggcgagagcatctgctcgccatgg 26243444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 27534305 - 27534352
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  27534305 actcaattctggatgtgctcgcgaggcgagagcatctgctcgccatgg 27534352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 33742658 - 33742701
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  33742658 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 33742701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 36133788 - 36133741
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  36133788 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 36133741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 16487914 - 16487856
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16487914 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16487856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 42997275 - 42997229
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||    
T  42997275 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatgg 42997229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 16351668 - 16351627
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  16351668 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16351627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 16356772 - 16356731
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  16356772 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16356731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 43255981 - 43255940
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  43255981 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 43255940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 45938433 - 45938474
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  45938433 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 45938474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 16678416 - 16678368
Alignment:
Q  158 tactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  16678416 tactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatgg 16678368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 1951587 - 1951540
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| |||| |||||||| ||||||||||||||    
T  1951587 actcagttctggaagtgctcgcgaagcgagagcatctgctcgccatgg 1951540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 17152313 - 17152266
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||| | ||||||||||||||    
T  17152313 actcagttctggaagtgctcgcgaggcgagaacatctgctcgccatgg 17152266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 18237172 - 18237219
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  18237172 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 18237219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 23139550 - 23139597
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  23139550 actcagttctggaagtgctcgcgaggcgagagcatccgctcgccatgg 23139597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 28569270 - 28569223
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||||  ||| |||||||| ||||||||||||||    
T  28569270 actcaattctggaagtgctcacgaagcgagagcatctgctcgccatgg 28569223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 14708459 - 14708413
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| |||| |||| ||||||||||||| ||||||||||||||    
T  14708459 ctcaattcaggaaatgctcgcgaggcgagagcatctgctcgccatgg 14708413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 3413082 - 3413123
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| || |||||||||||    
T  3413082 ttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 3413123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 25555802 - 25555843
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| | ||||||||||| ||||||||||||||    
T  25555802 ttctggaagtgctcgtgaggcgagagcatctgctcgccatgg 25555843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 174902 - 175108
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  |||||||||||  || ||||| ||||||  ||||| || || | |||| |||| ||| || ||||||||||||||| |||||||||    
T  174902 tcaagtaatgcaactaaacattatatcacgtcatattcaacactaacatctcataat-agcttcacagatttcagttaacttcttatataggtctcatta 175000  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    ||||  |||  |||||||| || |||| ||||||||||| ||||||||||||||||||| ||||  ||||||||||||| |||||| |||||| ||||||    
T  175001 ctaccaaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttggactcggttctggaagtgctcgcgaggtgagagcatctgct 175100  T
Q  199 cgccatgg 206  Q
    ||| ||||    
T  175101 cgcaatgg 175108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 124723 - 124769
Alignment:
Q  1 tcaagtaatgcata-aacattataatacatcataatcaacatcaaca 46  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||    
T  124723 tcaagtaatgcatataacattatatcacatcataatcaacatcaaca 124769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 20118 - 20323
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  |||||||||||  |||||||| ||||||  ||||| || ||  ||||| ||||  || || ||||||||||||||| |||||||||    
T  20118 tcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacaggttgcagttaacttcttatataggtctcatta 20216  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    |||| ||||  |||||| | || |||| ||||||||||| ||  |||| |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||    
T  20217 ctacccaagggtccatccctaatcaaatcatgcgacacagattacattatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgct 20316  T
Q  199 cgccatg 205  Q
    |||||||    
T  20317 cgccatg 20323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 1549 - 1680
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||||||||| |||||| |||||| ||||  |||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| |||||||||    
T  1549 ttaacttcttatataggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaag 1648  T
Q  174 tgctggcgaggcgagagcgtctgctcgccatg 205  Q
    |||| ||||||||||||| |||||||||||||    
T  1649 tgctcgcgaggcgagagcatctgctcgccatg 1680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 56 - 206
Target Start/End: Complemental strand, 48388 - 48238
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||||||| || ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  ||| |||||| |||||| | | || |||    
T  48388 cagcttcacatattgcatttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaatattcttact 48289  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  48288 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 48238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 6e-30; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 19863171 - 19863321
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  ||| |||||| |||||| | |||| |||    
T  19863171 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaatatccttact 19863270  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19863271 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 19873313 - 19873463
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| ||  |||  |||||||||| |||||| | |||| |||    
T  19873313 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaatatccttact 19873412  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19873413 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19873463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 202
Target Start/End: Complemental strand, 25642093 - 25641965
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  ||||||||||  ||||| | |||||||||| ||||| |||||||||    
T  25642093 ttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcagttctggaag 25641994  T
Q  174 tgctggcgaggcgagagcgtctgctcgcc 202  Q
    |||| ||||||||||||| ||||||||||    
T  25641993 tgctcgcgaggcgagagcatctgctcgcc 25641965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 74 - 206
Target Start/End: Original strand, 22432461 - 22432593
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  ||| |||||| |||||| | | || ||||| ||||| |||||||||    
T  22432461 ttaacttcttatataggtctcattactacccaagggtccatctcaaatcaaataatgagacacagatcgcaatatactaacttgcactcagttctggaag 22432560  T
Q  174 tgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||||||||||| ||||||||||||||    
T  22432561 tgctcgcgaggcgagagcatctgctcgccatgg 22432593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 22438951 - 22439143
Alignment:
Q  13 taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatcc 112  Q
    ||||| |||||  |||||||||||||||  ||||| || ||  ||||| |||| ||| || |||||||||||||||  |||||||||||| ||||  |||    
T  22438951 taaactttatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtcc 22439049  T
Q  113 atctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| || | ||  |||||||||| |||||| | | |||||||| ||||| || |||||||||| ||||||||||||| ||||||||| ||||    
T  22439050 atctcaaatcgaattatgcgacacagatcgcaatattctcacttgcactcagttgtggaagtgctcgcgaggcgagagcatctgctcgctatgg 22439143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 22334801 - 22334669
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||||||||| |||||||| |||| || |  |||| ||| || ||||  |||||||||| |||||| | |||||||||| | ||| |||||||||    
T  22334801 ttaacttcttatataggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaatatcctcacttgcattcagttctggaag 22334702  T
Q  174 tgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||||||||||| ||||||| ||||||    
T  22334701 tgctcgcgaggcgagagcatctgctcaccatgg 22334669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22831641 - 22831710
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||| ||||    
T  22831641 tcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 22831710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 15041444 - 15041328
Alignment:
Q  90 gtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgaga 189  Q
    ||||||||||||| || |  |||||||| || |||||||||||| ||| ||||| ||   |||||||| ||||||||||||||||| | |||||||||||    
T  15041444 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggttgcgaggcgaga 15041345  T
Q  190 gcgtctgctcgccatgg 206  Q
    || |||||||| |||||    
T  15041344 gcatctgctcgtcatgg 15041328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 16924741 - 16924657
Alignment:
Q  122 caaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||||||||| ||||||||   |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16924741 caaagcatgcgacacagatcgcattaaactcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16924657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 206
Target Start/End: Complemental strand, 21739950 - 21739800
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||| || |||||| ||| |||||||||  |||| |||||| | ||||||  |||| |||||| ||||||   | |||| |    
T  21739950 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacacagatcgcaacattctcaat 21739851  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||||||||||| ||||||||||||| ||||||| ||||||    
T  21739850 tgtactcagttctggaagtgctcgcgaggcgagagcatctgctcaccatgg 21739800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 18907299 - 18907449
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||||||| || ||||| ||||| ||| ||| |||||||||  |||  |||||| | || |||  ||||||||||| ||||||   | |||| |    
T  18907299 cagcttcacatattgcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacattctcatt 18907398  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  18907399 tgcactctgttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18907449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 12496588 - 12496635
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  12496588 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12496635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16920615 - 16920556
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagct 60  Q
    |||||||||||||||||||||||  ||||||||||||||| |||| | ||||||||||||    
T  16920615 tcaagtaatgcataaacattataccacatcataatcaacaacaacttatcttattcagct 16920556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 21702568 - 21702614
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  21702568 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 21702614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 15894339 - 15894207
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||| || |||||| ||| ||||||||| ||||  |||||||| ||||||   ||||||||||   ||||   | |||||||| ||||| |||||||||    
T  15894339 ttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggacgcaaagttctcacttgcactcagttctggaag 15894240  T
Q  174 tgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| |||||| |||||  ||||||||||||||    
T  15894239 tgctcgcgaggtgagagactctgctcgccatgg 15894207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 16965172 - 16965088
Alignment:
Q  122 caaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||||||||| ||| ||||   |||||||| ||| | ||||||||||||| | ||||||||||| ||||||||||||||    
T  16965172 caaagcatgcgacacagatcacattaaactcacttgcactaagttctggaagtgctcgtgaggcgagagcatctgctcgccatgg 16965088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 27553433 - 27553385
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 207  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  27553433 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggt 27553385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 31164721 - 31164625
Alignment:
Q  110 tccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| || ||||||||||||||||  |||||||   |||||||| |||||||||||||||| || ||||||| || || | ||||| ||||||    
T  31164721 tccatctctaatcaaaacatgcgacacaggtcgcattaaactcacttgcactcaattctggaagtactcgcgaggcaagggcatatgctcaccatgg 31164625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 8244141 - 8244184
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  8244141 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 8244184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 11567143 - 11567186
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  11567143 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 11567186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 12706968 - 12707015
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  12706968 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12707015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 16741486 - 16741533
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16741486 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16741533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 17804477 - 17804524
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17804477 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17804524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 19870871 - 19870914
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  19870871 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 19870914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 22429856 - 22429809
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  22429856 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22429809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 22863226 - 22863269
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  22863226 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 22863269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 23395349 - 23395392
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  23395349 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 23395392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 23657246 - 23657199
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  23657246 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23657199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 25135498 - 25135451
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  25135498 actcgattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 25135451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 27415768 - 27415721
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||    
T  27415768 actcaattctggaagtgctcgcgaggcgagagcatccgctcgccatgg 27415721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 27567435 - 27567388
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  27567435 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 27567388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11185641 - 11185711
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattac 71  Q
    ||||||||||||||||| |||||| || ||||||||| || |||||| ||||||||| || |||| |||||    
T  11185641 tcaagtaatgcataaactttataacacttcataatcagcaacaacatatcttattcatcttcacagattac 11185711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 16523222 - 16523181
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  16523222 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16523181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 22592624 - 22592583
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  22592624 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 22592583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 23990201 - 23990242
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  23990201 actcaattctggaagtgctcgcgaggcgagagcatctgctcg 23990242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 12618670 - 12618630
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctc 199  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  12618670 actcaattctggaagtgctcgcgaggcgagagcatctgctc 12618630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 22059577 - 22059521
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||| ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  22059577 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatgg 22059521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 1587557 - 1587510
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  1587557 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 1587510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 1644985 - 1645032
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||| ||||||||||||| | ||||||||||||    
T  1644985 actcaattctggatgtgctcgcgaggcgagagcatttgctcgccatgg 1645032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 5616640 - 5616593
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  5616640 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 5616593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 9482119 - 9482072
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| | |||||| |||||    
T  9482119 actcaattctggaagtgctcgcgaggcgagagcatatgctcgtcatgg 9482072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 14472550 - 14472597
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||| ||||||||||||| | ||||||||||||    
T  14472550 actcaattctggatgtgctcgcgaggcgagagcatatgctcgccatgg 14472597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 20907807 - 20907760
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| | ||||||||||| ||||||||||||||    
T  20907807 actcagttctggaagtgctcgtgaggcgagagcatctgctcgccatgg 20907760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 21834726 - 21834667
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 207  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| ||| |||||||||||    
T  21834726 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctactcgccatggt 21834667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20360943 - 20360873
Alignment:
Q  1 tcaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||| |||||||||  ||||||||||||||| |||||  |||||  ||||| |||||||||    
T  20360943 tcaagtaatgcatataacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatatta 20360873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 18180789 - 18180830
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||    
T  18180789 ttctggaagtgctcgcgaggcgagagcatctgctctccatgg 18180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 19790599 - 19790558
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||    
T  19790599 ttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 19790558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 21788 - 21584
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||| || ||  ||||| |||| ||| || ||||| ||||||||| |||||||||||    
T  21788 tcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttcacagattgcagttaacatcttatataggtctcattact 21690  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  |||  |||||| | || |||  || || ||||| ||| ||   | |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||    
T  21689 acctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcg 21590  T
Q  201 ccatgg 206  Q
    ||||||    
T  21589 ccatgg 21584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 29680 - 29476
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||| || ||  ||||| |||| ||| || ||||| ||||||||| |||||||||||    
T  29680 tcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttcacagattgcagttaacatcttatataggtctcattact 29582  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  |||  |||||| | || |||  || || ||||| ||| ||   | |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||    
T  29581 acctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcg 29482  T
Q  201 ccatgg 206  Q
    ||||||    
T  29481 ccatgg 29476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 12895 - 13099
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| || |||| |||| |||| ||| || ||||||||||||||| |||||||||||    
T  12895 tcaagtaatgcataaacattataatacatcataatcaactccaacatctcatatt-agcttcacaaattgcagttaacttcttatataggtctcattact 12993  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  |||  ||||||   || |||  || || || || ||| ||   | |||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||    
T  12994 acctaagggtccatccataatcaattcaagcaactcatatcacaacattctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcg 13093  T
Q  201 ccatgg 206  Q
    ||||||    
T  13094 ccatgg 13099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 61438 - 61395
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  61438 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 61395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 65352 - 65311
Alignment:
Q  161 tcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  65352 tcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 65311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 18363 - 18231
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||||| ||| ||| ||||||||| || |  |||||||| || ||||  ||||||||||||||||| | |||||||||| ||||| |||||||||    
T  18363 ttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaaatcgcaatatcctcacttgcactcagttctggaag 18264  T
Q  174 tgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||||||||||| ||||||||||||||    
T  18263 tgctcgcgaggcgagagcatctgctcgccatgg 18231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 14807 - 15013
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  ||||||| ||  ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| || ||||||    
T  14807 tcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttcatta 14905  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    |||| || || |||||||| || ||||  |||||||||| || ||| | |||||||| | ||||| ||||||||||||| ||||||||||||| ||||||    
T  14906 ctacccaggagtccatctctaatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgct 15005  T
Q  199 cgccatgg 206  Q
    ||||||||    
T  15006 cgccatgg 15013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 23822 - 24028
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  ||||||| ||  ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| || ||||||    
T  23822 tcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttcatta 23920  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    |||| || |  ||||||||  | ||||  |||||||||| || ||| | |||||||| | ||||| ||||||||||||| ||||||||||||| ||||||    
T  23921 ctacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgct 24020  T
Q  199 cgccatgg 206  Q
    ||||||||    
T  24021 cgccatgg 24028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 39246 - 39452
Alignment:
Q  1 tcaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcatta 98  Q
    ||||||||||||  ||||||| ||  ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| || ||||||    
T  39246 tcaagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttcatta 39344  T
Q  99 ctacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgct 198  Q
    |||| || |  ||||||||  | ||||  |||||||||| || ||| | |||||||| | ||||| ||||||||||||| ||||||||||||| ||||||    
T  39345 ctacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgct 39444  T
Q  199 cgccatgg 206  Q
    ||||||||    
T  39445 cgccatgg 39452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 18402 - 18581
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||||||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||||||| ||||  |||||||| || ||||    
T  18402 acatcataatcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaa 18500  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      |||||||||| |||||| | |||||||||| ||||| ||||||||| ||| | ||||||||||| | ||||||||||||    
T  18501 ttatgcgacacatatcgcaatatcctcacttgcactcagttctggaagcgctcgtgaggcgagagcatttgctcgccatgg 18581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 76997 - 76950
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  76997 actcaattctggaagtgctcgcgaggcgagagcatctgcttgccatgg 76950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 206
Target Start/End: Complemental strand, 65703 - 65571
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||  |||||||| | |||||| | |||||||||| ||||| |||||||||    
T  65703 ttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacaaagatcgcaatatcctcacttgcactcagttctggaag 65604  T
Q  174 tgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||  |||||||||||| ||||||||||||||    
T  65603 tgctcacgaggcgagagcatctgctcgccatgg 65571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 53845 - 53892
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  53845 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 53892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 16330 - 16127
Alignment:
Q  3 aagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattacta 101  Q
    |||||||||| | |||||||||  |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| |||  |||||||    
T  16330 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcatattacta 16232  T
Q  102 cgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgc 201  Q
    | ||||  |||| ||| || ||||  |||||||||| ||||||    ||||||||| ||||||||||||||||||| |||||||||| || |||||||||    
T  16231 cccaagggtccacctctaatcaaattatgcgacacagatcgcaacaacctcacttgcactcaattctggaagtgctcgcgaggcgagggcatctgctcgc 16132  T
Q  202 catgg 206  Q
    |||||    
T  16131 catgg 16127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 856272 - 856473
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    ||||||||| ||||||||||||||||||||||| || |||  ||||| || || | |||| |||| ||| || ||||||||||||||| |||||||||||    
T  856272 tcaagtaatacataaacattataatacatcatattcgacacaaacatctcata-taagcttcacagattgcagttaacttcttatataggtctcattact 856370  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  |||  |||||| | || |||  || || ||||| ||| ||   | |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||    
T  856371 acctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcg 856470  T
Q  201 cca 203  Q
    |||    
T  856471 cca 856473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 15877727 - 15877606
Alignment:
Q  85 tatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgagg 184  Q
    |||| ||||||||||||| ||||  |||||||| || ||||  |||||||||  |||||| | |||||||||| ||||| ||||||||||||| ||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcagttctggaagtgctcgcgagg 15877628  T
Q  185 cgagagcgtctgctcgccatgg 206  Q
    ||||||| ||||||||||||||    
T  15877627 cgagagcatctgctcgccatgg 15877606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 206
Target Start/End: Original strand, 23408581 - 23408773
Alignment:
Q  13 taaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatcc 112  Q
    |||||||||||  |||||||| ||||||  ||||| || ||  ||||| |||| ||| || ||||||||| | ||| ||  || |||||| ||||  |||    
T  23408581 taaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtcc 23408679  T
Q  113 atctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| || ||||  |||||||||| |||||| | |||||||||| ||| | ||||||||||||| ||||||||||||| ||||||||||||||    
T  23408680 atctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23408773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 23077435 - 23077256
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    ||||||||| |||||| ||||| || ||  ||||| |||| |||||| | ||||||| ||||| |||||||||||||  |||  |||||||| || ||||    
T  23077435 acatcataaccaacataaacatttcataa-cagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaa 23077337  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      |||||||||| ||||||   |||||| ||| | ||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  23077336 ttatgcgacacagatcgcaaaatcctcaattgaaatcggttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 23077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 17525109 - 17524951
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||| ||||||||| ||||  |||||||| || ||||    
T  17525109 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaa 17525011  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggc 185  Q
      |||||||||| |||||| | |||||||||| ||||| || |||||||||| |||||||    
T  17525010 ttatgcgacacagatcgcaatatcctcacttgcactcagttttggaagtgctcgcgaggc 17524951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 14179570 - 14179672
Alignment:
Q  1 tcaagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattac 99  Q
    |||||||||||||||| |||||||  ||||||||||||||| |||||  |||||  ||||| |||| |||| | ||||||||||||||| ||| || |||    
T  14179570 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatac 14179669  T
Q  100 tac 102  Q
    |||    
T  14179670 tac 14179672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 206
Target Start/End: Complemental strand, 14878464 - 14878283
Alignment:
Q  25 tacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaa-tccatctccaaaca 123  Q
    ||||||||| ||||||| ||||| || || | |||| |||| ||| || ||||||||||||||| ||| |||||||||  | |   |||||||| || ||    
T  14878464 tacatcatattcaacattaacatttcataat-agcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatca 14878366  T
Q  124 aaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||  |||||||||| |||||| | |||||| | | ||||  |||||||||||||  |||||||||| | ||||||||||||||    
T  14878365 aattatgcgacacagatcgcaatatcctcaatcgcactcggttctggaagtgctctcgaggcgagaacatctgctcgccatgg 14878283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 19725748 - 19725690
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19725748 tcctaacttgtattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19725690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 23052913 - 23052855
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||| | ||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  23052913 tcctcacttgcattcaattctgcaagtgctcgcgaggcgagagcatctgctcgccatgg 23052855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 16369692 - 16369748
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||| ||||||||||||| ||||||||| ||| ||||||||||||||    
T  16369692 ctcacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatgg 16369748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 16910034 - 16910090
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  16910034 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 16910090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 26190843 - 26190787
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  26190843 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 26190787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 326990 - 326943
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  326990 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 326943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 1598306 - 1598259
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  1598306 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 1598259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 3833954 - 3834001
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  3833954 actcaaatctggaagtgctcgcgaggcgagagcatctgctcgccatgg 3834001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 7109982 - 7110025
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  7109982 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 7110025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 7113917 - 7113960
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  7113917 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 7113960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 11300337 - 11300290
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  11300337 actcaattctggatgtgctcgcgaggcgagagcatctgctcgccatgg 11300290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 11594965 - 11594918
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  11594965 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 11594918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 15060553 - 15060632
Alignment:
Q  127 catgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||| ||||||   |||| ||||| | ||| | ||||||||||| ||||||||||||| ||||||||||||||    
T  15060553 catgcgacacagatcgcaacatcctaacttgcaatcagtcctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15060632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 15482942 - 15482989
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15482942 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15482989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 15849911 - 15849864
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15849911 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15849864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 15941730 - 15941683
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15941730 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15941683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 16690499 - 16690546
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16690499 actcacttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16690546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 16697072 - 16697119
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16697072 actcacttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16697119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 16797880 - 16797833
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16797880 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16797833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 16808707 - 16808660
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  16808707 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 16808660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 17242252 - 17242299
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17242252 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 17242299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 20461326 - 20461279
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  20461326 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 20461279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 22337003 - 22337046
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  22337003 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 22337046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 27409469 - 27409426
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27409469 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 27409426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 38814664 - 38814711
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  38814664 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 38814711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 42326224 - 42326271
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  42326224 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 42326271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 322888 - 322930
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatggt 207  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  322888 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggt 322930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 1982639 - 1982589
Alignment:
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||||||||||| ||||||||||||| | ||||||||||||    
T  1982639 tgtactcagttctggaagtgctcgcgaggcgagagcatttgctcgccatgg 1982589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 12173068 - 12173126
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  12173068 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12173126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 3402775 - 3402734
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  3402775 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 3402734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 11298352 - 11298307
Alignment:
Q  161 tcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||    
T  11298352 tcaattctggaagtgctcgcgaggcgagagcatctgatcgccatgg 11298307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 12496554 - 12496595
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  12496554 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 12496595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20698418 - 20698373
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaaca 46  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||    
T  20698418 tcaagtaatgcataaacattatatcacatcataatcaacttcaaca 20698373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 12037787 - 12037731
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  12037787 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcggctcgccatgg 12037731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 7793172 - 7793125
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||    
T  7793172 actcagttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 7793125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 15617657 - 15617700
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||    
T  15617657 actcaattctggaagtgctcgcgaggcaagagcatctgctcgcc 15617700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 22321948 - 22321991
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||    
T  22321948 actcaattttggaagtgctcgcgaggcgagagcatctgctcgcc 22321991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 11863073 - 11863131
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||| |||||||| ||||||| ||  |||||||||||| ||||||||||||||    
T  11863073 tcctaacttgcactcaattttggaagtacttacgaggcgagagcatctgctcgccatgg 11863131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14576816 - 14576770
Alignment:
Q  1 tcaagtaatgcata-aacattataatacatcataatcaacatcaaca 46  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||    
T  14576816 tcaagtaatgcatataacattatatcacatcataatcaacatcaaca 14576770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14972992 - 14973038
Alignment:
Q  1 tcaagtaatgcata-aacattataatacatcataatcaacatcaaca 46  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||    
T  14972992 tcaagtaatgcatataacattatatcacatcataatcaacatcaaca 14973038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17487994 - 17488040
Alignment:
Q  1 tcaagtaatgcata-aacattataatacatcataatcaacatcaaca 46  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||    
T  17487994 tcaagtaatgcatataacattatatcacatcataatcaacatcaaca 17488040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 11557204 - 11557163
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| | ||||||||||||    
T  11557204 ttctggaagtgctcgcgaggcgagagcatatgctcgccatgg 11557163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 206
Target Start/End: Original strand, 15051707 - 15051856
Alignment:
Q  57 agctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcactt 156  Q
    |||| |||| ||| || ||||| ||||||||| ||| || ||||||  |||  |||||| | || |||  ||||||||||| ||| ||   |||| ||||    
T  15051707 agcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcacaacatcctaactt 15051806  T
Q  157 gtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    | | ||| | || |||||||| ||||||||||||| ||||||||||||||    
T  15051807 gcattcagtcctagaagtgctcgcgaggcgagagcatctgctcgccatgg 15051856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 18383736 - 18383695
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  18383736 ttcttgaagtgctcgcgaggcgagagcatctgctcgccatgg 18383695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 2897643 - 2897603
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatg 205  Q
    ||||||||||||| ||||||||||||| |||||||| ||||    
T  2897643 ttctggaagtgctcgcgaggcgagagcatctgctcgtcatg 2897603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 20723288 - 20723328
Alignment:
Q  166 tctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||| ||||||||||||| ||| ||||||||||    
T  20723288 tctggaagtgctcgcgaggcgagagcatctactcgccatgg 20723328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 2013 - 2214
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    |||||||||||||||||||||||||||||||||  ||||   ||||| || || |||||| |||| ||| || ||||||||||||||| |||||||||||    
T  2013 tcaagtaatgcataaacattataatacatcatatccaacgcaaacatctcata-tcagcttcacagattgcagttaacttcttatataggtctcattact 2111  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  |||  |||||| | || |||  || || ||||| |||  |   | |||||||| ||||| |||| |||||||| ||||||||||||| ||||||||    
T  2112 acctaagggtccatccctaatcaattcaagcaacacagatcataacattctcacttgcactcagttctcgaagtgctcgcgaggcgagagcatctgctcg 2211  T
Q  201 cca 203  Q
    |||    
T  2212 cca 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 206
Target Start/End: Original strand, 6264 - 6444
Alignment:
Q  25 tacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaa 124  Q
    ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || |||||||||| |||| || || ||||||| || | ||||||||| || |||    
T  6264 tacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaa 6362  T
Q  125 aacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |  |||||||||| ||||||   |||||||||| || || ||||||||||||| |||||| |||||| ||||||||||||||    
T  6363 attatgcgacacagatcgcaacatcctcacttgcacacagttctggaagtgctcgcgaggagagagcatctgctcgccatgg 6444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 15646 - 15742
Alignment:
Q  110 tccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  15646 tccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 206
Target Start/End: Complemental strand, 15626 - 15447
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||  |||||||| || ||||    
T  15626 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaa 15528  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      | |||||||| ||| || | |||||||||| ||| | |||| |||||| | ||||||||||||| |||||| |||||||    
T  15527 ttaagcgacacagatcacaatatcctcacttgcactaagttctagaagtgatcgcgaggcgagagcatctgcttgccatgg 15447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 206
Target Start/End: Original strand, 773 - 923
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||||||||| ||| |||||||||||||  |||  |||||||| || ||||  |||||||||| |||||| | |||||| |    
T  773 cagcttcacagattgcagttaacttcttaaataggtctcattactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcatt 872  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |  ||||| |||||||||||||  |||||||||| | ||||||||||||||    
T  873 tacactcagttctggaagtgctcacgaggcgagaacatctgctcgccatgg 923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 206
Target Start/End: Complemental strand, 34838 - 34688
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||| ||||||||| ||| ||||||||| ||||  |||||||| ||||||   ||| |||| |  ||||| | | ||||||    
T  34838 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggtcgcaatgttctcact 34739  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  34738 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 34688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 64133 - 64180
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  64133 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 64180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 76017 - 76064
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  76017 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 76064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16418 - 16487
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||| ||||    
T  16418 tcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 16487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 1137 - 1034
Alignment:
Q  74 ttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaag 173  Q
    ||||||||||||||| |||  |||||||| |||| ||||||||| || ||||  |||||||||| |||||| | |||||||||| ||||| |||||||||    
T  1137 ttaacttcttatataggtcatattactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaag 1038  T
Q  174 tgct 177  Q
    ||||    
T  1037 tgct 1034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 6165 - 6087
Alignment:
Q  128 atgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||| |||||   |||||||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  6165 atgcgacacaagtcgcaacatcctcacttgcattcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 6087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 7427 - 7628
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattact 100  Q
    ||||||||||||||||||||||||||||||||| |||||   ||||| || || |||| | || | ||| || ||||||||||||||| |||||||||||    
T  7427 tcaagtaatgcataaacattataatacatcatattcaacgcaaacatctcata-tcagtttcatagattgcagttaacttcttatataggtctcattact 7525  T
Q  101 acgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcg 200  Q
    ||  |||  |||||| | || |||  || || | ||||||| |    | |||||||| ||||| || |||||||||| ||||||||||||| | ||||||    
T  7526 acctaagggtccatccctaatcaattcaagcaatacaaatcactacattctcacttgcactcagttttggaagtgctcgcgaggcgagagcatttgctcg 7625  T
Q  201 cca 203  Q
    |||    
T  7626 cca 7628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15447 - 15378
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||| ||||||  |||||||||||| || |||||| |||||| ||||| |||| ||||    
T  15447 tcaagtaatgcataaatattatatcacatcataatcatcaacaacatatcttatacagcttcacagatta 15378  T

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Target: scaffold0149 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 3904 - 4082
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||| ||||||||||| ||||| || ||  ||||| |||| ||| || ||||  ||||||||| ||| ||||||||| ||||  |||||||| || ||||    
T  3904 acattataatcaacattaacatttcataa-cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaa 4002  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      |||||| ||| ||||||   |||||||||| ||||| ||||||||||||| ||||||||||||| | | ||||||||||    
T  4003 t-atgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatttactcgccatgg 4082  T

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Target: scaffold0149; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 8335 - 8513
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||| ||||||||||| ||||| || ||  ||||| |||| ||| || ||||  ||||||||| ||| ||||||||| ||||  |||||||| || ||||    
T  8335 acattataatcaacattaacatttcataa-cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaa 8433  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
      |||||| ||| ||||||   |||||||||| ||||| ||||||||||||| ||||||||||||| | | ||||||||||    
T  8434 t-atgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatttactcgccatgg 8513  T

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Target: scaffold0106 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 1425 - 1484
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagct 60  Q
    |||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||    
T  1425 tcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagct 1484  T

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Target: scaffold0106; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7402 - 7461
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagct 60  Q
    |||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||    
T  7402 tcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagct 7461  T

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Target: scaffold0412 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 6272 - 6194
Alignment:
Q  128 atgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||| |||||||||| | |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  6272 atgcgaaacaaatcgcaatatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 6194  T

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Target: scaffold0311 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 206
Target Start/End: Complemental strand, 7006 - 6856
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||| ||||||||| ||| |||||||||  |||   ||||| | || |||  ||||||||||| ||||||   | |||| |    
T  7006 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggcccatccctaatcaactcatgcgacacagatcgcaacattctcaat 6907  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    || ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  6906 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 6856  T

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Target: scaffold0598 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1034 - 965
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| | |||| ||||| |||| ||||    
T  1034 tcaagtaatgcataaacattataacacatcataatcaacaacaacatattttatacagcttcacagatta 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 32679 - 32768
Alignment:
Q  110 tccatctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctc 199  Q
    |||| ||| |||||||  |||||||||| |||||  | |||||||||| ||||| ||||||||||||| ||||||||||||| |||||||    
T  32679 tccaactctaaacaaattatgcgacacagatcgcgatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctc 32768  T

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Target: scaffold0111; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 8779 - 8826
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  8779 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 8826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 4712 - 4768
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  4712 ctcacttgaactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 4768  T

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Target: scaffold0585 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 9614 - 9662
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 207  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  9614 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggt 9662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 18490 - 18434
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  18490 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18434  T

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Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 13911 - 13855
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  13911 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 13855  T

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Target: scaffold0035 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 191
Target Start/End: Complemental strand, 46655 - 46520
Alignment:
Q  56 cagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaaacatgcgacacaaatcgcattttcctcact 155  Q
    ||||| |||| ||| || ||||||||||||||| ||| |||||||||  |||| |||||| | || |||   |||||||||| ||||||   |||| |||    
T  46655 cagcttcacagattgcagttaacttcttatataggtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaact 46556  T
Q  156 tgtactcaattctggaagtgctggcgaggcgagagc 191  Q
    || ||||| ||||||||||||| |||||| ||||||    
T  46555 tgcactcagttctggaagtgctcgcgaggagagagc 46520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 2499 - 2452
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  2499 actcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 2452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 24794 - 24747
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  24794 actcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatgg 24747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 2157 - 2203
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  2157 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgg 2203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 30570 - 30523
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  30570 actcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatgg 30523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5113 - 5044
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||| ||||||||||||| ||||| ||||||||| |||||| | |||||||| | |||||||||    
T  5113 tcaagtaatgtataaacattataacacatcttaatcaacaacaacatattttattcagtttcacatatta 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13634 - 13703
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||||||||||  ||||||||||||||| | |||| |||||| ||||| |||| ||||    
T  13634 tcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 13703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 74 - 151
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaac 78  Q
    |||||||| ||||||||||||||  ||||||||||||||| |||||| |||||| || || |||| |||| |||||||    
T  74 tcaagtaaggcataaacattatatcacatcataatcaacaacaacatatcttatacaacttcacagattatacttaac 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4850 - 4927
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaac 78  Q
    |||||||| ||||||||||||||  ||||||||||||||| |||||| |||||| || || |||| |||| |||||||    
T  4850 tcaagtaaggcataaacattatatcacatcataatcaacaacaacatatcttatacaacttcacagattatacttaac 4927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32203 - 32272
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    |||||||||||||||||||||||  ||||||||||||||| | |||| |||||| ||||| |||| ||||    
T  32203 tcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 32272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51718 - 51787
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    ||||| |||||||||||||||||| || ||||| |||||| |||||| |||||||||||| |||| ||||    
T  51718 tcaagaaatgcataaacattataacacttcatattcaacaacaacatatcttattcagcttcacagatta 51787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 1918 - 1862
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  1918 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 1862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 2179 - 2227
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 207  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  2179 actcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggt 2227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 6083 - 6039
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 203  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||    
T  6083 actcagttctggaagtgctcgcgaggcgagagcatcagctcgcca 6039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 15618 - 15662
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccat 204  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  15618 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccat 15662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 11128 - 11080
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 207  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  11128 actcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggt 11080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 45398 - 45445
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  45398 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 45445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 7224 - 7268
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 203  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||    
T  7224 actcagttctggaagtgctcgcgaggcgagagcatcagctcgcca 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 15244 - 15196
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatggt 207  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  15244 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggt 15196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 23501 - 23445
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  23501 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 23445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 38436 - 38286
Alignment:
Q  26 acatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatccatctccaaacaaa 125  Q
    |||||||| ||||||| ||||| || ||  ||||| |||| ||| ||  |||||||||||||| ||| ||||||||| ||||  |||| ||| || ||||    
T  38436 acatcatattcaacattaacatttcataa-cagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaatcaaa 38338  T
Q  126 acatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgct 177  Q
      |||||||||| ||||||   | |||||||| ||| | |||||||||||||    
T  38337 ttatgcgacacagatcgcaaagttctcacttgcacttagttctggaagtgct 38286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 209 - 256
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  209 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 2082 - 2129
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  2082 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 2129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 611 - 658
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  611 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 4927 - 4884
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  4927 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 4884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 18634 - 18677
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  18634 actcaattctggaagtgctcgcgaggcgagagcatctgctcgcc 18677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 18458 - 18411
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  18458 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 18411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 4050 - 4003
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  4050 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 4003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 3356 - 3309
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  3356 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 3309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 19843 - 19796
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19843 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 10183 - 10230
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  10183 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 10230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 19468 - 19515
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  19468 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 19515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 62541 - 62587
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||||    
T  62541 ctcaattctggaagtactcgcgaggcgagagcatctgctcgccatgg 62587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 13190 - 13231
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  13190 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 13231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 66241 - 66194
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  66241 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 66194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 56377 - 56424
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  56377 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 56424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 191100 - 191059
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  191100 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 191059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 192802 - 192762
Alignment:
Q  166 tctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||| || ||||||||||||| ||||||||||||||    
T  192802 tctggaagtactcgcgaggcgagagcatctgctcgccatgg 192762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 228199 - 228152
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  228199 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 228152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 71593 - 71640
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||    
T  71593 actcaattctggaagtgctcgcgaggcgagagcatcagctcgccatgg 71640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 96886 - 96933
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  96886 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 96933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 413870 - 413829
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  413870 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 413829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 139990 - 140037
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| | ||||||||||||    
T  139990 actcagttctggaagtgctcgcgaggcgagagcatatgctcgccatgg 140037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 16488 - 16442
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||||||||||| |||||||||| || ||||||||||||||    
T  16488 ctcaattctggaagtgcttgcgaggcgagtgcatctgctcgccatgg 16442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 2255 - 2214
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  2255 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 10115 - 10074
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  10115 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 10074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 1790 - 1831
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  1790 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 1831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 576 - 617
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  576 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 205
Target Start/End: Complemental strand, 4904 - 4712
Alignment:
Q  12 ataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaagaatc 111  Q
    |||||||| ||  ||||||||| ||||||| ||||| || ||  ||||| |||| ||| || | ||||||||||||| |||  | | |||| ||||| ||    
T  4904 ataaacatcatcttacatcatattcaacattaacatttcataa-cagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtc 4806  T
Q  112 catctccaaacaaaacatgcgacacaaatcgcattttcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatg 205  Q
    || |||  | ||||  ||||||||||||||||| | |||||| ||| ||||  || ||||| |||| ||||||||||||| ||| ||| |||||    
T  4805 cacctctgatcaaattatgcgacacaaatcgcaatgtcctcaattgcactcggttttggaaatgctcgcgaggcgagagcatcttctcaccatg 4712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 3139 - 3180
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  3139 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 3180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 6805 - 6846
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  6805 ttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 6846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 1324 - 1268
Alignment:
Q  150 ctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||| | ||||||||||||| ||||||||||||| ||||||||| ||||    
T  1324 ctcacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgctatgg 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 23995 - 24086
Alignment:
Q  15 aacattataatacatcataatcaacatcaacatgtcttattcagctacacatattacacttaacttcttatatatgtctcattactacgcaag 107  Q
    |||||||||  |||||||| ||||||  ||||| |||||  ||||| |||| ||| || ||||||||||||||| ||||||||||||| ||||    
T  23995 aacattatatcacatcatattcaacactaacatctcttaa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaag 24086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 26706 - 26742
Alignment:
Q  170 gaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  26706 gaagtgctcgcgaggcgagagcatctgctcgccatgg 26742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 47132 - 47200
Alignment:
Q  2 caagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    ||||||||||||||||||||||  ||||||||| || || |||||| |||||| ||||| |||| ||||    
T  47132 caagtaatgcataaacattatatcacatcataaacatcaacaacatatcttatacagcttcacagatta 47200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 11660 - 11707
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  11660 actcagttatggaagtgctcgcgaggcgagagcatctgctcgccatgg 11707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 15377 - 15424
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||| ||||||| ||||||||||||| ||||||||||||||    
T  15377 actcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatgg 15424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 7096 - 7049
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||||||||    
T  7096 actcagttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 7049  T

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Target: scaffold0280 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 19117 - 19070
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  19117 actcagttctggaagtgctcgcgaggcgagagcatcttctcgccatgg 19070  T

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Target: scaffold0177 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 13313 - 13266
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| |||||| |||||| ||||||||||||||    
T  13313 actcagttctggaagtgctcgcgaggagagagcatctgctcgccatgg 13266  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 35336 - 35289
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  35336 actcagttctggaagtgctcgcgaggcgagagcatctcctcgccatgg 35289  T

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Target: scaffold0132 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 36585 - 36632
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| |||| |||||||| ||||||||||||| ||||||||||||||    
T  36585 actcagttctagaagtgctcgcgaggcgagagcatctgctcgccatgg 36632  T

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Target: scaffold0130 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 5826 - 5779
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||    
T  5826 actcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 5779  T

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Target: scaffold0130; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27968 - 28014
Alignment:
Q  1 tcaagtaatgcata-aacattataatacatcataatcaacatcaaca 46  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||    
T  27968 tcaagtaatgcatataacattatatcacatcataatcaacatcaaca 28014  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 21405 - 21350
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 203  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| |||||||||||    
T  21405 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgcca 21350  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 58544 - 58501
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcc 202  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||    
T  58544 actcaattctagaagtgctcgcgaggcgagagcatctgctcgcc 58501  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 23496 - 23543
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  23496 actcagttatggaagtgctcgcgaggcgagagcatctgctcgccatgg 23543  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 173570 - 173617
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||| || |||||||||| ||||||||||||| ||||||||||||||    
T  173570 actcagttatggaagtgctcgcgaggcgagagcatctgctcgccatgg 173617  T

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Target: scaffold1842 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1031 - 993
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaac 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  1031 tcaagtaatgcataaacattatatcacatcataatcaac 993  T

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Target: scaffold1296 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 673 - 731
Alignment:
Q  148 tcctcacttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||| | ||| ||||||||||||| ||||||||||||| ||||||| ||||||    
T  673 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcaccatgg 731  T

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Target: scaffold0476 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 5885 - 5923
Alignment:
Q  168 tggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  5885 tggaagtgctcgcgaggcgagagcatctgctcgccatgg 5923  T

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Target: scaffold0476; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 7080 - 7118
Alignment:
Q  168 tggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  7080 tggaagtgctcgcgaggcgagagcatctgctcgccatgg 7118  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 9701 - 9747
Alignment:
Q  160 ctcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| ||||||||||||| ||||||| ||||| ||||||||||||||    
T  9701 ctcagttctggaagtgctcgcgaggcaagagcatctgctcgccatgg 9747  T

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Target: scaffold0193; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13349 - 13395
Alignment:
Q  1 tcaagtaatgcata-aacattataatacatcataatcaacatcaaca 46  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||    
T  13349 tcaagtaatgcatataacattatatcacatcataatcaacatcaaca 13395  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 167961 - 167923
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaac 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  167961 tcaagtaatgcataaacattatatcacatcataatcaac 167923  T

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Target: scaffold1552 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 639 - 680
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||||||||| ||||||||||||| || |||||||||||    
T  639 ttctggaagtgctcgcgaggcgagagcatcagctcgccatgg 680  T

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Target: scaffold0540 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3134 - 3089
Alignment:
Q  1 tcaagtaatgcata-aacattataatacatcataatcaacatcaac 45  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||    
T  3134 tcaagtaatgcatataacattatatcacatcataatcaacatcaac 3089  T

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Target: scaffold0456 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10408 - 10339
Alignment:
Q  1 tcaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagctacacatatta 70  Q
    ||||||||||||||| |||||||  |||||||||||| || | |||| |||||| ||||| |||| ||||    
T  10408 tcaagtaatgcataatcattatatcacatcataatcatcaacgacatatcttatacagcttcacagatta 10339  T

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Target: scaffold0216 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 16940 - 16899
Alignment:
Q  165 ttctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  16940 ttcttgaagtgctcgcgaggcgagagcatctgctcgccatgg 16899  T

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Target: scaffold0104 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 2114 - 2167
Alignment:
Q  153 acttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||| ||| || |||||||||| ||||||||||||| ||| ||||||||||    
T  2114 acttgtattcagttatggaagtgctcgcgaggcgagagcatctactcgccatgg 2167  T

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Target: scaffold0104; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 9796 - 9849
Alignment:
Q  153 acttgtactcaattctggaagtgctggcgaggcgagagcgtctgctcgccatgg 206  Q
    ||||||| ||| || |||||||||| ||||||||||||| ||| ||||||||||    
T  9796 acttgtattcagttatggaagtgctcgcgaggcgagagcatctactcgccatgg 9849  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 192142 - 192098
Alignment:
Q  159 actcaattctggaagtgctggcgaggcgagagcgtctgctcgcca 203  Q
    |||||||||||||||||||  |||||||||||| || ||||||||    
T  192142 actcaattctggaagtgctcacgaggcgagagcatcagctcgcca 192098  T

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