View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3929_low_117 (Length: 202)
Name: NF3929_low_117
Description: NF3929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3929_low_117 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 17 - 185
Target Start/End: Original strand, 32527978 - 32528146
Alignment:
| Q |
17 |
cataggcgctttcgagccaaacaaaaccataactaagaatcacggaagtgaaaaggtcttgatacataaaatgaccgataaccaatcgcatatccaaaat |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
32527978 |
cataggcgctttcgagccaaacaaaaccataactaagaatcacggaagcgaaaaggtcttgatacataaaatgaccgataaccaatcacatatccaaaat |
32528077 |
T |
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| Q |
117 |
gagggatcgacaaatctgagcaccataaatagtaaaacgacaacacatgaaagaacaccatcaaatatt |
185 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
32528078 |
gagggatcgacaaatctgagcaccataaatagtaaaacgacgacacatgaaagaacaccatcaaatatt |
32528146 |
T |
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