View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3930_high_4 (Length: 214)
Name: NF3930_high_4
Description: NF3930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3930_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 14 - 197
Target Start/End: Complemental strand, 2768662 - 2768479
Alignment:
| Q |
14 |
attattctagctagaaactcttaagttttcaaaaatttattatcttatactaaaatatatatttttcaactgtgcaaagctcatgtgtatgagccgtgtt |
113 |
Q |
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| T |
2768662 |
attattctagctagaaactcttaagttttcaaaaatttattatcttatactaaaatatatatttttcaactgtgcaaagctcatgtgtatgagccgtgtt |
2768563 |
T |
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| Q |
114 |
taatggatcactaaattagagctgaaaaagtatcagtgcaagtcacatgcttatttatttttctatacatgaaagctcggtttt |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2768562 |
taatggatcactaaattagagctgaaaaagtatcagtgcaagtcacatgcttatttatttttctatacatgaaagctcggtttt |
2768479 |
T |
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