View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3934_high_36 (Length: 236)
Name: NF3934_high_36
Description: NF3934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3934_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 44475115 - 44474912
Alignment:
| Q |
14 |
cagagagagtatatttttaatcgtgcttgttttaatactattttactgtgattttctatttgatcaaattcaagtatatatgatcatctcttggtcgata |
113 |
Q |
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| T |
44475115 |
cagagagagtatatttttaatcgtgcttgttttaatactattttactgtgattttctatttgatcaaattcaagtatatatgatcatctcttggtcgata |
44475016 |
T |
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| Q |
114 |
tttagtaggttttttaataagggatatttggtagttcatgcatacaacttttatattggtacaacgtttctctaagctagcctaaattcaatcacacttg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44475015 |
tttagtaggttttttaataagggatatttggtagttcatgcatacaacttttatattggtacaacgtttctctaagctagcctaaattcaatcacacttg |
44474916 |
T |
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| Q |
214 |
atcc |
217 |
Q |
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|||| |
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| T |
44474915 |
atcc |
44474912 |
T |
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