View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3934_low_29 (Length: 256)
Name: NF3934_low_29
Description: NF3934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3934_low_29 |
 | |
|
| [»] scaffold0006 (1 HSPs) |
| | |
|
| [»] scaffold1532 (2 HSPs) |
| | |
|
| [»] scaffold0096 (2 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0778 (2 HSPs) |
| | |
|
| [»] scaffold0041 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 52308077 - 52307846
Alignment:
| Q |
1 |
gacttacgacattagagtcggtcaaaccattaactcggataccatcgatgaagcataaatggagcctagtagatcatcatcatcctcatcattttggttt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||| |
|
|
| T |
52308077 |
gacttacgacattagagtcggtcaaaccattaactcggataccatcgatgaagcataaatggagtcgagtagatcatcatcatcctcatcattttagttt |
52307978 |
T |
|
| Q |
101 |
taggcaacatagaagtgatttagacatcacatcttcatcatatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtg |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
52307977 |
taggcaacatagaagtgacttagacatcacatcttcatcatatttatatgtatatatatagggggctgttaacttacacccacctaaaaacattaaggtg |
52307878 |
T |
|
| Q |
201 |
caagttagtaagctgcacccacttataatttt |
232 |
Q |
| |
|
|| ||||||||||| ||||||||||||||||| |
|
|
| T |
52307877 |
caggttagtaagctacacccacttataatttt |
52307846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 8434403 - 8434474
Alignment:
| Q |
160 |
aggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattt |
231 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
8434403 |
agggggctgctaacttacacccacctgaaaacactaaggtgcaagttagcaaactgcacccacttataattt |
8434474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 34293108 - 34293179
Alignment:
| Q |
151 |
tatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| |
|
|
| T |
34293108 |
tatatatagagggggctgctaacttacacccacctaaaaacattaaggtgcaagttagcaagctacacccac |
34293179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 34293546 - 34293452
Alignment:
| Q |
145 |
tatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||| |||||||| | ||| |||||||||||||| ||| |||||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
34293546 |
tatatatatatatatatggggctgctaacttacactcacttaaaaacactgaggtgtaagttagcaagctgcacccacttataa-tttactaaaac |
34293452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 36225538 - 36225480
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
36225538 |
ctgctaacttacacccacttaaaaacactaaggtgcaagttagcaagctacacccactt |
36225480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 23777471 - 23777425
Alignment:
| Q |
178 |
acccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
23777471 |
acccacctaaaaacactaaggtgcaagttagcaagctgcacccactt |
23777425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 51574097 - 51574023
Alignment:
| Q |
152 |
atatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttat |
226 |
Q |
| |
|
||||||| | ||| ||||||||||||| ||||||||||||| ||||||||||||||| || || ||||||||||| |
|
|
| T |
51574097 |
atatatatatggggctgctaacttacaaccacctaaaaacattaaggtgcaagttagcaaactacacccacttat |
51574023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 7017375 - 7017311
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataatt |
230 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| | ||||| | ||| |||||||||| |
|
|
| T |
7017375 |
ctgctaacttacacccaactaaaaacactaaggtgcaagtaattaagccgaacctacttataatt |
7017311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 17482335 - 17482272
Alignment:
| Q |
151 |
tatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
|||||||| || || ||||||||||||||| ||||||||||||||||||||| ||||| ||||| |
|
|
| T |
17482335 |
tatatatatagcgggctgctaacttacacctacctaaaaacactaaggtgcacgttagcaagct |
17482272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 7017027 - 7017065
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7017027 |
taacttacacccacctaaaaacactaaggtgcaagttag |
7017065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 36224029 - 36224071
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
36224029 |
ctgctaacttacacctacctaaaaacactaaggtgcaagttag |
36224071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 8434616 - 8434575
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8434616 |
tgctaacttacactcacctaaaaacactaaggtgcaagttag |
8434575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 34042115 - 34042074
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
34042115 |
tgctaaattacacccacctaaaaacactaaggtgcaagttag |
34042074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 51964991 - 51964935
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||||||| ||| | ||||||| |
|
|
| T |
51964991 |
ctgctaacttacacccatctaaaaacactaagatgcaagttagcaagttacacccac |
51964935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 23776735 - 23776782
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttagtaagctgca |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
23776735 |
taacttacacccacctaaaaacactaaggtacaagttggcaagctgca |
23776782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 9477592 - 9477525
Alignment:
| Q |
169 |
ctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaa |
237 |
Q |
| |
|
|||| |||||||||||||||||||||||||| || |||| ||||| ||||||||| | |||||||||| |
|
|
| T |
9477592 |
ctaatttacacccacctaaaaacactaaggtttaaattagcaagctacacccacttgt-attttactaa |
9477525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 13386981 - 13386918
Alignment:
| Q |
151 |
tatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
13386981 |
tatatatatagggggttgctaacttacacccactccaaaacactaaggtgcaaattagcaagct |
13386918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 34041771 - 34041825
Alignment:
| Q |
185 |
taaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||| | ||| ||||||||||| |
|
|
| T |
34041771 |
taaaaacattaaggtgcaagttagcaagctgcacccacgtgtaa-tttactaaaac |
34041825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 4894680 - 4894729
Alignment:
| Q |
174 |
ttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccact |
223 |
Q |
| |
|
||||| ||||||||||||||||||||| ||| ||| ||||| |||||||| |
|
|
| T |
4894680 |
ttacatccacctaaaaacactaaggtgtaaggtagcaagctacacccact |
4894729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 53732431 - 53732343
Alignment:
| Q |
151 |
tatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||||||| | ||| ||| ||| ||||| ||| |||||||||| |||||| || |||| ||||| |||||||||| ||||||||||||| |
|
|
| T |
53732431 |
tatatatatatggggctgttaatttacatccatctaaaaacacgaaggtgtaaattagaaagctatacccacttat-attttactaaaac |
53732343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 24831205 - 24831153
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaaca |
192 |
Q |
| |
|
|||| ||||| |||||||| | ||| ||||||| ||||||||||||||||||| |
|
|
| T |
24831205 |
atatatatatatatatatatatggggctgctaatttacacccacctaaaaaca |
24831153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 27)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 6475494 - 6475396
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaa |
239 |
Q |
| |
|
|||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6475494 |
atatatatatatatatatatagggg-ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataa-tttactaaaa |
6475397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 6746446 - 6746544
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaa |
239 |
Q |
| |
|
|||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
6746446 |
atatatatatatatatatatagggg-ctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctgcacccacttataa-tttactaaaa |
6746543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 44682525 - 44682448
Alignment:
| Q |
161 |
ggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
44682525 |
gggggctgctaacttacacccacctaaaaacacta-ggtgcaagttagcaagctgcacccacttataa-tttactaaaac |
44682448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 6515591 - 6515522
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
6515591 |
taacttacacccacctaaaaacattaaggtgcaagttagcaagctgcacccacttataa-tttactaaaac |
6515522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 8814725 - 8814647
Alignment:
| Q |
152 |
atatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattt |
231 |
Q |
| |
|
||||||| | ||| |||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
8814725 |
atatatatatggggctgctaacttacacccacctaaaa-cactaaggtgtaagttagcaagctgcacccacttataattt |
8814647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 45713690 - 45713761
Alignment:
| Q |
151 |
tatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
45713690 |
tatatatatagggggctgctgacttacacccacctaaaaacactaaggtgcaagttagcaagctacacccac |
45713761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 48117005 - 48117093
Alignment:
| Q |
151 |
tatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||||||| ||||| ||| ||||||||||||||||||||| | ||||||| ||||||| ||| ||||||||||||||| ||||||||||| |
|
|
| T |
48117005 |
tatatatatagggggctgataacttacacccacctaaaaatattaaggtgtaagttagcaagttgcacccacttataa-tttactaaaac |
48117093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 31152867 - 31152966
Alignment:
| Q |
140 |
atatttatatgtatatataca-ggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaa |
238 |
Q |
| |
|
|||| ||||| |||||||| | |||| |||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||||| |
|
|
| T |
31152867 |
atatatatatatatatatatatgggggctgctaacttgcatccacctaaaaacactaaggtgcaagttagcaagttgcacccacttgt-attttactaaa |
31152965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 240
Target Start/End: Complemental strand, 45714108 - 45714037
Alignment:
| Q |
168 |
gctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| |
|
|
| T |
45714108 |
gctaacttatacccacctaaaaacactaaggtgcaagttagcaagctgcattcacttataa-tttactaaaac |
45714037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 14986125 - 14986045
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
|||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |
|
|
| T |
14986125 |
atatatatatatatatatataggg--ctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagttacacccac |
14986045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 31153805 - 31153726
Alignment:
| Q |
145 |
tatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
||||| |||| ||| ||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
31153805 |
tatatatatagatatagggggatgctaacttgcacccacctaaaaacactaaggtgcaagttagcaagctacacccactt |
31153726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 25891204 - 25891302
Alignment:
| Q |
140 |
atatttatatgtatatataca-ggggactgctaacttacacccacctaaaaa----cactaaggtgcaagttagtaagctgcacccacttataatttta |
233 |
Q |
| |
|
|||| ||||| |||||||| | ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| || ||||||| |
|
|
| T |
25891204 |
atatatatatatatatatatatggggactcctaacttacacccacctaaaaattaacactaaggtgcaagttaggaagctacacccacctaaaatttta |
25891302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 33580196 - 33580252
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |
|
|
| T |
33580196 |
tgctaacttacacccacctaaaaacactaaggtgcaagtt-gcaagctacacccactt |
33580252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 33580834 - 33580751
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||| ||||| |||||||| ||||| ||||||||||||||| |||||||| || |||||| |||||||| ||||| ||||||||| |
|
|
| T |
33580834 |
atatatatatatatatatatagggg-ctgctaacttacacctacctaaaatcattaaggtacaagttagcaagctacacccactt |
33580751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 42371129 - 42371068
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataa |
228 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||| ||||| |
|
|
| T |
42371129 |
ctgctaacttacacc-acctaaaaatactaaggtgcaagttagcaagctacacccacctataa |
42371068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 27065598 - 27065528
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaa |
237 |
Q |
| |
|
||||||| ||| ||||||||||||||| ||||||| || |||| ||||| ||||||||||| |||||||||| |
|
|
| T |
27065598 |
ctgctaatttatacccacctaaaaacagtaaggtgtaaattagcaagctacacccacttat-attttactaa |
27065528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 48120307 - 48120236
Alignment:
| Q |
144 |
ttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctg |
215 |
Q |
| |
|
|||||| |||||||| ||| | ||| || ||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
48120307 |
ttatatatatatatataggaggttgcgaatttacacccacctaaaaacactaaggtgcatgttagcaagctg |
48120236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 6515164 - 6515238
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
|||| ||||| |||||||| | ||||||| |||||||||| || ||||||| | ||||||||||||||| ||||| |
|
|
| T |
6515164 |
atatatatatatatatatatatgggactgttaacttacactcatctaaaaatattaaggtgcaagttagcaagct |
6515238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 38467908 - 38467851
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||| ||||||||||| || ||||||||| |
|
|
| T |
38467908 |
tgctaatttacacccaccccaaaacactaaggtacaagttagtaaactacacccactt |
38467851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 44682161 - 44682213
Alignment:
| Q |
172 |
acttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| || || ||||||||| |
|
|
| T |
44682161 |
acttacacccacctaagaacactaaggtgcaagttaacaacctacacccactt |
44682213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 27077827 - 27077886
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttat |
226 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | ||||||| |||||||||| |||||| |
|
|
| T |
27077827 |
tgctaacttacacccaccaaaaaacactaaaatacaagttatcaagctgcacctacttat |
27077886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 27083624 - 27083683
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttat |
226 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | ||||||| |||||||||| |||||| |
|
|
| T |
27083624 |
tgctaacttacacccaccaaaaaacactaaaatacaagttatcaagctgcacctacttat |
27083683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 27730994 - 27731057
Alignment:
| Q |
151 |
tatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
|||||||| | ||| |||| || ||||||||||||||||| | ||||||||||||||| ||||| |
|
|
| T |
27730994 |
tatatatatatgggtctgcaaatttacacccacctaaaaaaattaaggtgcaagttagcaagct |
27731057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 93372 - 93421
Alignment:
| Q |
175 |
tacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| || || ||||||||| |
|
|
| T |
93372 |
tacacccacctaaaaatactaaggtgtaagttagcaacctacacccactt |
93421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 22896838 - 22896757
Alignment:
| Q |
146 |
atatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttata |
227 |
Q |
| |
|
|||| |||||||| | ||| ||| |||||||||| | | ||||||||||||||||||||||| ||| | || ||||||||| |
|
|
| T |
22896838 |
atatatatatatatatggggctgttaacttacacttatcgaaaaacactaaggtgcaagttagcaagttacatccacttata |
22896757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 43020008 - 43020081
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagc |
213 |
Q |
| |
|
|||| ||||| |||||||| | ||| |||||||||||| |||||||||||||| |||| | ||||||| |||| |
|
|
| T |
43020008 |
atatatatatatatatatatatggggctgctaacttactcccacctaaaaacatgaaggagtaagttagcaagc |
43020081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 18195459 - 18195527
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
|||| ||||| |||||||| | ||| || ||||||||||||| |||||||||||||| ||||| |||| |
|
|
| T |
18195459 |
atatatatatatatatatatatggggttgttaacttacacccatctaaaaacactaagctgcaaattag |
18195527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 23)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 1566144 - 1566066
Alignment:
| Q |
161 |
ggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
1566144 |
gggggctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctgcacccacttataa-tttactaaaac |
1566066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 38776651 - 38776552
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaa |
239 |
Q |
| |
|
|||| ||||| |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||| |
|
|
| T |
38776651 |
atatatatatatatatatataggaaactgctaacttacacccacctaaaaatactaaggtgcaagttagcaagctgtacccacttataa-tttactaaaa |
38776553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 19238278 - 19238375
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaa |
239 |
Q |
| |
|
|||| ||||| |||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
19238278 |
atatatatatatatatatataggg--ctgctaacttatacccacctaaaaacattaaggtgcaagttagcaagctgcacccacttataa-tttactaaaa |
19238374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 19311462 - 19311559
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaa |
239 |
Q |
| |
|
|||| ||||| |||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
19311462 |
atatatatatatatatatataggg--ctgctaacttatacccacctaaaaacattaaggtgcaagttagcaagctgcacccacttataa-tttactaaaa |
19311558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 13474609 - 13474699
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattt |
231 |
Q |
| |
|
|||| ||||| |||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
13474609 |
atatatatatatatatatatatggg-ctgctaacttacatccacctaaaaacactaaggtgcaagttagcaagttgcacccacttataattt |
13474699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 4203445 - 4203372
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| |||||| ||||||||||| |
|
|
| T |
4203445 |
ctgctaacttacactcacctaaaaacactaaggtgcaagttagcaagttgcacccatttataa-tttactaaaac |
4203372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 9478930 - 9479011
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
|||| ||||| |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
9478930 |
atatatatatatatatatataaggg-ctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctacacccac |
9479011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 961440 - 961382
Alignment:
| Q |
164 |
gactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| |
|
|
| T |
961440 |
gactgctaacttacacccacctaaaaacactaaggtgcaagttaataagttacacccac |
961382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 1565797 - 1565854
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccact |
223 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
1565797 |
ctgctaacttacacccacttaaaaacactaaggtgcaagttagcaagctacacccact |
1565854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 8624847 - 8624903
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
8624847 |
ctgctaacttacactcacctaaaaacactaaggtgcaagttagtaaactacacccac |
8624903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 25113153 - 25113098
Alignment:
| Q |
168 |
gctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccact |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || || |||||||| |
|
|
| T |
25113153 |
gctaacttacacccacctaaaaacactaaggtgcaagttagcaacctacacccact |
25113098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 40304672 - 40304614
Alignment:
| Q |
161 |
ggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacc |
219 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
40304672 |
gggggctgctaacttgcacccacctaaaaacactaaggtgcaagttagcaagctacacc |
40304614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 25106946 - 25107000
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcaccca |
221 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||| ||||| |||||| |
|
|
| T |
25106946 |
tgctaacttacatccacctaaaaacactaaggtacaagttagcaagctacaccca |
25107000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 9479351 - 9479314
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaag |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9479351 |
tgctaacttacacccacctaaaaacactaaggtgcaag |
9479314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 42443019 - 42443082
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattt |
231 |
Q |
| |
|
||||||||||||||| | |||||||| ||||||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
42443019 |
tgctaacttacaccctc-taaaaacattaaggtgcaagttagcaagctgcatccatttataattt |
42443082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 4203050 - 4203103
Alignment:
| Q |
169 |
ctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||| |||| ||||| ||||||| |
|
|
| T |
4203050 |
ctaacttacactcacctaaaaatactaaggtgcaaattagcaagctacacccac |
4203103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 42443568 - 42443529
Alignment:
| Q |
169 |
ctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
42443568 |
ctaacttacacccacctaaaaacattaagatgcaagttag |
42443529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 13475063 - 13474991
Alignment:
| Q |
145 |
tatatgtatatatacaggggactgctaacttacacccacct---aaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
||||| |||||||| | ||| |||||||||||||| ||||| ||||||||| ||||||||||||| ||||| |
|
|
| T |
13475063 |
tatatatatatatatatggggctgctaacttacacacacctaaaaaaaacacttaggtgcaagttagcaagct |
13474991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 3469305 - 3469256
Alignment:
| Q |
175 |
tacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| || || ||||||||| |
|
|
| T |
3469305 |
tacacccacctaaaaatactaaggtgtaagttagcaacctacacccactt |
3469256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 4047517 - 4047598
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcaccca |
221 |
Q |
| |
|
|||| ||||| |||||||| | ||| ||| |||||||||| ||| |||||| | ||||||||||||||| || || |||||| |
|
|
| T |
4047517 |
atatatatatatatatatatatggggctgttaacttacactcacttaaaaatattaaggtgcaagttagcaacctacaccca |
4047598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 14124573 - 14124536
Alignment:
| Q |
171 |
aacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
14124573 |
aacttacatccacctaaaaacactaaagtgcaagttag |
14124536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 42906815 - 42906864
Alignment:
| Q |
175 |
tacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| || || ||||||||| |
|
|
| T |
42906815 |
tacacccacctaaaaatactaaggtgtaagttagcaacctacacccactt |
42906864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 42906768 - 42906823
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
||||||| |||||||||||| ||| |||||||||| || |||||||||| ||||||| |
|
|
| T |
42906768 |
ctgctaatttacacccacct-aaatcactaaggtgtaaattagtaagctacacccac |
42906823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 21)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 13829832 - 13829740
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaa-acactaaggtgcaagttagtaagctgcacccacttataattt |
231 |
Q |
| |
|
|||| ||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
13829832 |
atatatatatatatatatatagggggttgctaacttacacccacctaaaacacactaaggtgcaagttagcaagctgcacccacttataattt |
13829740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 6831708 - 6831626
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
|||| ||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| |
|
|
| T |
6831708 |
atatatatatatatatatatagggggctgctaacttacacccacctaaaaacaccaaggtgcaagttagcaagctacacccac |
6831626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 31659685 - 31659613
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
31659685 |
tgctaacttacatccacctaaaaatactaaggtgcaagttagcaagctgcacccacttataa-tttactaaaac |
31659613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 3678146 - 3678078
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaa |
239 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
3678146 |
taacttacacccacctaaaaatactaaggtacaagttagtaagctacacccacttat-attttactaaaa |
3678078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 3677455 - 3677532
Alignment:
| Q |
161 |
ggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaa |
239 |
Q |
| |
|
|||| |||||| ||||||||||| |||||||||||||||||||||||| ||||| |||| |||||| |||||||||||| |
|
|
| T |
3677455 |
gggggctgctaccttacacccacttaaaaacactaaggtgcaagttagcaagctacacctacttat-attttactaaaa |
3677532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 10862738 - 10862811
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| || |||| ||||| ||||||||||| ||||||||||||| |
|
|
| T |
10862738 |
ctgctaatttacacccacctaaaaacactaaggtgtaaattagcaagctacacccacttat-attttactaaaac |
10862811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 29404129 - 29404225
Alignment:
| Q |
140 |
atatttatatgtatatatacag-gggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaa |
237 |
Q |
| |
|
|||| ||||| |||||||| || ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| | |||||||||| |
|
|
| T |
29404129 |
atatatatatatatatatatagtggggctgctaacttacacccacctaaaaacactaa-gtgcaagttagcaagctacacccacttgt-attttactaa |
29404225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 3670526 - 3670619
Alignment:
| Q |
145 |
tatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||| ||| |||| ||||| ||||||||||||| ||| |||||||||||||||||||||||| ||| |||| |||||||||| ||||||||||| |
|
|
| T |
3670526 |
tatatttatttatatagggg-ctgctaacttacatccaattaaaaacactaaggtgcaagttagcaagttgcatccacttataa-tttactaaaac |
3670619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 6831330 - 6831424
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaa |
239 |
Q |
| |
|
|||| ||||| |||||||| ||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
6831330 |
atatatatatatatatatatagggg-ctgctaacttacacccaccaaaaaacacta----tcaagttagcaagctgcacccacttataa-tttactaaaa |
6831423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 3670971 - 3670894
Alignment:
| Q |
145 |
tatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
||||| |||||||| ||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||| | ||||||| |
|
|
| T |
3670971 |
tatatatatatatatagggggctgctaatttacacccacctaaaaatattaaggtgcaagttagcaagttacacccac |
3670894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 39443432 - 39443367
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattt |
231 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||| ||||| | ||||||| ||||||| |
|
|
| T |
39443432 |
ctgctaacttatatccacctaaaaacactaaggtgcaagttaataagcagtacccactcataattt |
39443367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 30712066 - 30712122
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||||||||||| ||| | ||||||| |
|
|
| T |
30712066 |
ctgctaacttacactcacctaaaatcactaaggtgcaagttagcaagttacacccac |
30712122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 29406846 - 29406784
Alignment:
| Q |
160 |
aggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||||||| ||||||| ||| | ||||||||| |
|
|
| T |
29406846 |
aggggaccgctaacttacactcacctaaaaacactaaggt--aagttagcaagttacacccactt |
29406784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 31659284 - 31659338
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
31659284 |
ctgctaacttacacccacct--aaatactaaggtgcaagttagcaagctacacccac |
31659338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 10863139 - 10863083
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| || |||| | ||| ||||||| |
|
|
| T |
10863139 |
ctgctaatttacacccacctaaaaacactaaggtgtaaattagcaggctacacccac |
10863083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 32275882 - 32275834
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||| ||||| |
|
|
| T |
32275882 |
ctgctaacttacacccaccccaaaacacgaaggtgcaagttagcaagct |
32275834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 36469960 - 36469897
Alignment:
| Q |
145 |
tatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
||||| |||||| | | ||| |||||||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
36469960 |
tatatatatataaagatggggctgctaacttgcatccacttaaaaacactaaggtgcaagttag |
36469897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 10863091 - 10863042
Alignment:
| Q |
175 |
tacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||| || || ||||||||| |
|
|
| T |
10863091 |
tacacccacctaaaaacaccaaggtgtaagttagcaacctacacccactt |
10863042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 29513234 - 29513305
Alignment:
| Q |
151 |
tatatatacaggggactgctaacttacacccacctaaaaacactaa---ggtgcaagttagtaagctgcacc |
219 |
Q |
| |
|
|||||||| ||||| ||||||||| | ||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
29513234 |
tatatatatagggggatgctaacttgcttccacctaaaaacactaaagtggtgcaagttagcaagctgcacc |
29513305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 13293727 - 13293783
Alignment:
| Q |
174 |
ttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataatt |
230 |
Q |
| |
|
|||||||||||||||||||| |||||| || |||| ||| | ||||||| ||||||| |
|
|
| T |
13293727 |
ttacacccacctaaaaacaccaaggtgtaaattaggaaggtacacccacctataatt |
13293783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Complemental strand, 30713096 - 30713068
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacact |
194 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
30713096 |
ctgctaacttacacccacctaaaaacact |
30713068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 18052889 - 18052954
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattt |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
18052889 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagcaaactgcacccacttataattt |
18052954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 222
Target Start/End: Complemental strand, 18053777 - 18053695
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
|||| ||||| |||||||| | ||| || |||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
18053777 |
atatatatatatatatatatatggggctactaacttatacccacctaaaaacactaaggtgcaagttagcaagctacacccac |
18053695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 33483360 - 33483425
Alignment:
| Q |
174 |
ttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||||||||||||||||||||||||| || |||| | || ||||||||||| ||||||||||||| |
|
|
| T |
33483360 |
ttacacccacctaaaaacactaaggtataaattagacaactacacccacttat-attttactaaaac |
33483425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 19)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 49901666 - 49901601
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattt |
231 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
49901666 |
ctgctaacttacacccacctaaaaacactaaggtgcaagtaagcaagctgcacccacttataattt |
49901601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 508432 - 508501
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
508432 |
taacttacacccacctaaaaacactaaggtgcaagttagcaagctgcaccgacttataa-tttactaaaac |
508501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 37553474 - 37553396
Alignment:
| Q |
161 |
ggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
37553474 |
gggggctgctaacttacatccacctaaaaatactaaggtgcaagttagcaagctgcaccgacttataa-tttactaaaac |
37553396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 32151829 - 32151773
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
32151829 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctacacccac |
32151773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 13413790 - 13413860
Alignment:
| Q |
169 |
ctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| |
|
|
| T |
13413790 |
ctaacttacatccacctaaaaacattaaggtgcaagttagcaagctgcaaccacttataa-tttactaaaac |
13413860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 14188671 - 14188749
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacc |
219 |
Q |
| |
|
|||| ||||| |||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
14188671 |
atatatatatatatatatatatggg-ctgctaacttacacccacctaaaaacattaaggtgcaagttagcaagctgcacc |
14188749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 52853948 - 52853891
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccact |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
52853948 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctacatccact |
52853891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 34503913 - 34503837
Alignment:
| Q |
138 |
tcatatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
|||||| ||||| |||||||| | ||||| |||||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
34503913 |
tcatatatatatatatatatatataagactgataacttacacccacctaaaaacactagggtgcaagttagcaagct |
34503837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 24657165 - 24657093
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaa |
239 |
Q |
| |
|
||||||| |||||| ||||| ||||||||||| |||||||||| |||| ||||||||||| |||||||||||| |
|
|
| T |
24657165 |
ctgctaatttacactcacctcaaaacactaagatgcaagttagcaagccacacccacttat-attttactaaaa |
24657093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 37553111 - 37553161
Alignment:
| Q |
174 |
ttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| || || ||||||||| |
|
|
| T |
37553111 |
ttacacccatctaaaaacactaaggtgcaagttagcaacctacacccactt |
37553161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 12458575 - 12458519
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| || |||| ||| | ||||||| |
|
|
| T |
12458575 |
ctgctaatttacacccacctaaaaacactaaggtgtaaattagcaagttacacccac |
12458519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 508822 - 508784
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
508822 |
taacttacacccacctaaaaacactaaagtacaagttag |
508784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 10920478 - 10920556
Alignment:
| Q |
145 |
tatatgtatatataca-ggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccac |
222 |
Q |
| |
|
||||| |||||||||| |||| ||||||||||| | |||| ||||||| |||||| |||||||| ||||| ||||||| |
|
|
| T |
10920478 |
tatatatatatatacacgggggctgctaacttaaattcaccaaaaaacattaaggtacaagttagcaagctacacccac |
10920556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 52853366 - 52853407
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
52853366 |
ctgctaacttacacccac-taaaaacactaaggtgcaggttag |
52853407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 10765736 - 10765809
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagc |
213 |
Q |
| |
|
|||| ||||| |||||||| | ||| |||||||||||| |||||||||||||| |||| | ||||||| |||| |
|
|
| T |
10765736 |
atatatatatatatatatatatggggctgctaacttactcccacctaaaaacatgaaggagtaagttagcaagc |
10765809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 27055676 - 27055725
Alignment:
| Q |
175 |
tacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| || || ||||||||| |
|
|
| T |
27055676 |
tacacccacctaaaaatactaaggtgtaagttagcaacctacacccactt |
27055725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 35760548 - 35760499
Alignment:
| Q |
175 |
tacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| || || ||||||||| |
|
|
| T |
35760548 |
tacacccacctaaaaatactaaggtgtaagttagcaacctacacccactt |
35760499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 46435694 - 46435645
Alignment:
| Q |
175 |
tacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| || || ||||||||| |
|
|
| T |
46435694 |
tacacccacctaaaaatactaaggtgtaagttagcaacctacacccactt |
46435645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 30694634 - 30694602
Alignment:
| Q |
199 |
tgcaagttagtaagctgcacccacttataattt |
231 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
30694634 |
tgcaagttagcaagctgcacccacttataattt |
30694602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 280323 - 280396
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| |
|
|
| T |
280323 |
ctgctaacttacatccacctaaaaacattaaggtgcaagttagcaagctgcatccacttataa-tttactaaaac |
280396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 9963798 - 9963867
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||||||||| |||||||| ||||||||||| |
|
|
| T |
9963798 |
taacttacacccacctaaaaacactaaggtgcaagtcagcaagctgcacctacttataa-tttactaaaac |
9963867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 47412903 - 47412984
Alignment:
| Q |
137 |
atcatatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacc |
219 |
Q |
| |
|
||||||| ||||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
47412903 |
atcatatatatatatatatatacagggg-ctgttaacttgcacccacctaaaaacactaaggtgcaagttaacaagctgcacc |
47412984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 1507726 - 1507661
Alignment:
| Q |
149 |
tgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
1507726 |
tgtatatatatagggggctgctaacttacacccatctaaaaacactaaggtgcaagttagcaagct |
1507661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 23657913 - 23657854
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttat |
226 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
23657913 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagcaagctacaccaacttat |
23657854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 46916493 - 46916565
Alignment:
| Q |
151 |
tatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccact |
223 |
Q |
| |
|
|||||||| ||| | ||||||||||||||||||||||||| |||| |||||||||||| ||||| |||||||| |
|
|
| T |
46916493 |
tatatatataggaggctgctaacttacacccacctaaaaatactacggtgcaagttagcaagctacacccact |
46916565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 47413586 - 47413518
Alignment:
| Q |
151 |
tatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacc |
219 |
Q |
| |
|
|||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
47413586 |
tatatatatagggggctgttaacttgcacccacctaaaaacactaaggtgcaagttaacaagctgcacc |
47413518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 24790804 - 24790873
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||| |||||||| |||||| ||| ||||||||||| |
|
|
| T |
24790804 |
taacttacatccacctaaaaacactaaggtgtaagttagcaagctgcatccacttttaa-tttactaaaac |
24790873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 7579430 - 7579490
Alignment:
| Q |
164 |
gactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
7579430 |
gactgctaatttacacccaccttaaaacactaaggtgcaagttagcaagctacactcactt |
7579490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 9964191 - 9964139
Alignment:
| Q |
168 |
gctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcaccc |
220 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
9964191 |
gctaacttacacctacctaaaaacactaaggtgcaagttagaaagctacaccc |
9964139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 38796779 - 38796732
Alignment:
| Q |
161 |
ggggactgctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
38796779 |
gggggctgctaacttacacccacctaaaaacattaaggtgcaagttag |
38796732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 2658300 - 2658372
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| || |||| ||||| ||||||||||| ||||||||||||| |
|
|
| T |
2658300 |
ctgctaatttacacccac-taaaaacactaaggtgtaaattagcaagctacacccacttat-attttactaaaac |
2658372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 1507383 - 1507439
Alignment:
| Q |
183 |
cctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||| ||| ||||||||||| |
|
|
| T |
1507383 |
cctaaaaacgctaaggtgcaagttagcaagctgcacccacttgtaa-tttactaaaac |
1507439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 23657263 - 23657304
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
23657263 |
tgctaacttacacccacctaaaaatactaaggtgcaagttag |
23657304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 33473862 - 33473792
Alignment:
| Q |
169 |
ctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||| || |||| ||| | ||||||||||| ||||||||||||| |
|
|
| T |
33473862 |
ctaatttacatccacctaaaaacactaaggtgtaaattagcaagttacacccacttat-attttactaaaac |
33473792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 43439296 - 43439370
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
|||| ||||| |||||||| | | |||||||| ||||||||||||||||||||||||||| || |||| ||||| |
|
|
| T |
43439296 |
atatatatatatatatatatatagcactgctaatttacacccacctaaaaacactaaggtgtaaattagcaagct |
43439370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 10982336 - 10982385
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacc |
219 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10982336 |
taacttgcatccacctaaaaacactaaggtgcaagttaacaagctgcacc |
10982385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 11486703 - 11486658
Alignment:
| Q |
169 |
ctaacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
11486703 |
ctaatttacatccacctaaaaacactaaggtgcaagttagcaagct |
11486658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 47266672 - 47266621
Alignment:
| Q |
145 |
tatatgtatatatacaggggactgctaacttacacccacctaaaaacactaa |
196 |
Q |
| |
|
||||| |||||||| ||||| ||| |||||| |||||||||||||||||||| |
|
|
| T |
47266672 |
tatatatatatatatagggggctggtaacttgcacccacctaaaaacactaa |
47266621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 7561614 - 7561656
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
|||||||||||||| |||| ||||| ||||||||||||||||| |
|
|
| T |
7561614 |
ctgctaacttacacacacccaaaaatactaaggtgcaagttag |
7561656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 9158539 - 9158611
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||||| ||||| ||||||||||| | ||||||| || |||| ||||| |||||||||| ||||||||||||| |
|
|
| T |
9158539 |
tgctaatttacatccacctaaaaatattaaggtgtaaattagaaagctatacccacttat-attttactaaaac |
9158611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 32716176 - 32716097
Alignment:
| Q |
145 |
tatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
||||| |||||||| ||||| |||||||||| |||||| |||||||||||||| |||||||||| |||||||||| |||| |
|
|
| T |
32716176 |
tatatatatatatatagggggctgctaacttgcacccatctaaaaacactaagctgcaagttagcaagctgcacctactt |
32716097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 32715432 - 32715531
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaa |
239 |
Q |
| |
|
|||| ||||| |||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| || ||||| |||| |||| | |||||||||||| |
|
|
| T |
32715432 |
atatatatatatatatatatatggggttgctaacttgcacccacctaaaaacactaatgtgcaagtgagcaagctacacctacttgt-attttactaaaa |
32715530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 33106096 - 33106032
Alignment:
| Q |
160 |
aggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||| |||| || |||||| ||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
33106096 |
aggggactactaatttgcacccatctaaaaacactaaggtgcaagttagcaagctacacccactt |
33106032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 26637707 - 26637657
Alignment:
| Q |
174 |
ttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||| || ||||||||| |
|
|
| T |
26637707 |
ttacacccaactaaaaatactaaggtgcaagttagtaacctacacccactt |
26637657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 28867731 - 28867784
Alignment:
| Q |
186 |
aaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||| ||||||||| ||||||||||| |
|
|
| T |
28867731 |
aaaaacactaaggtgcaagttagcaagatgcactcacttataa-tttactaaaac |
28867784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 36896972 - 36896901
Alignment:
| Q |
166 |
ctgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| |||||||||| ||||||| ||||||||||| ||||||||||| |
|
|
| T |
36896972 |
ctgctaacttacacc-acctaaaaaca-taatttgcaagttagcaagctgctcccacttataa-tttactaaaac |
36896901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 15145593 - 15145510
Alignment:
| Q |
140 |
atatttatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||| ||||| |||||||| |||| ||||||||||||| ||||||||||| | |||||||||| |||| || || ||||||||| |
|
|
| T |
15145593 |
atatatatatatatatatattgggg-ctgctaacttacatccacctaaaaataataaggtgcaaattagcaacctacacccactt |
15145510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 14148903 - 14148952
Alignment:
| Q |
175 |
tacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| || || ||||||||| |
|
|
| T |
14148903 |
tacacccacctaaaaatactaaggtgtaagttagcaacctacacccactt |
14148952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 18014528 - 18014479
Alignment:
| Q |
175 |
tacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| || || ||||||||| |
|
|
| T |
18014528 |
tacacccacctaaaaatactaaggtgtaagttagcaacctacacccactt |
18014479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1532 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold1532
Description:
Target: scaffold1532; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 1302 - 1371
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||| |
|
|
| T |
1302 |
taacttacatccacctaaaaacactaaggtgcaggttagcaagctgcacctacttataa-tttactaaaac |
1371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1532; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 1684 - 1622
Alignment:
| Q |
145 |
tatatgtatatatacaggggactgctaacttacacccacctaaaaacactaaggtgcaagttag |
208 |
Q |
| |
|
||||| |||||||| | ||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
1684 |
tatatatatatatatatggg-ctgctaacttacacctacctaaaaacactaaggtgcaagttag |
1622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 41666 - 41609
Alignment:
| Q |
167 |
tgctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccactt |
224 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
41666 |
tgctaacttacacctacctaaaaacactaaggtgcaagttagcaagttgcacccactt |
41609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 40701 - 40771
Alignment:
| Q |
145 |
tatatgtatatataca-ggggactgctaacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
||||| |||||||| | |||| ||||||||||||||| |||||||||||||||||| |||||||| ||||| |
|
|
| T |
40701 |
tatatatatatatatatgggggctgctaacttacacctacctaaaaacactaaggtacaagttagcaagct |
40771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 452665 - 452723
Alignment:
| Q |
181 |
cacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
|||||||||||||||||||| || ||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
452665 |
cacctaaaaacactaaggtgtaaaatagtaagctacacccacttat-attttactaaaac |
452723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0778 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0778
Description:
Target: scaffold0778; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 3193 - 3237
Alignment:
| Q |
170 |
taacttacacccacctaaaaacactaaggtgcaagttagtaagct |
214 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||| ||||| |
|
|
| T |
3193 |
taacttacacccacctaaaaaaactaatgtgcaagttagcaagct |
3237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0778; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 3666 - 3595
Alignment:
| Q |
169 |
ctaacttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaact |
241 |
Q |
| |
|
|||||||||| ||||||||||||| |||||| |||||| | |||| |||||| |||| |||| ||||||||| |
|
|
| T |
3666 |
ctaacttacatccacctaaaaacattaaggtacaagtttgcaagcgacacccatttat-atttgactaaaact |
3595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 7365 - 7300
Alignment:
| Q |
174 |
ttacacccacctaaaaacactaaggtgcaagttagtaagctgcacccacttataattttactaaaac |
240 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| |||| ||||||||| | ||||||||||||| |
|
|
| T |
7365 |
ttacatccacctaaaaacactaaggtataagttagcaagccacacccacttgt-attttactaaaac |
7300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University