View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3934_low_40 (Length: 207)
Name: NF3934_low_40
Description: NF3934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3934_low_40 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 38085063 - 38084875
Alignment:
| Q |
1 |
tgcatgcgatattagttgtcacaatttgaatggagccagcatgactaaattttaaaaaagtgataactgaaatgatattcggttaatatatttactaaaa |
100 |
Q |
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| T |
38085063 |
tgcatgcgatattagttgtcacaatttgaatggagccagcatgactaaattttaaaaaagtgataactgaaatgatattcggttaatatatttactaaaa |
38084964 |
T |
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| Q |
101 |
tacctagatagctacaaagtaacatcgtatggttagaacaagccctgccattacagagggagacacatcttgtttcttatgatcaaatt |
189 |
Q |
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| T |
38084963 |
tacctagatagctacaaagtaacattgtatggttagaacaagccctgccattacagagggagacacatcttgtttcttatgatcaaatt |
38084875 |
T |
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