View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3936_high_6 (Length: 338)

Name: NF3936_high_6
Description: NF3936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3936_high_6
NF3936_high_6
[»] chr5 (37 HSPs)
chr5 (68-151)||(34753014-34753095)
chr5 (68-150)||(25328023-25328103)
chr5 (18-68)||(299503-299552)
chr5 (18-68)||(3295110-3295159)
chr5 (18-68)||(27502131-27502180)
chr5 (18-68)||(36492312-36492361)
chr5 (18-68)||(41632796-41632845)
chr5 (68-151)||(15370187-15370268)
chr5 (18-66)||(36568664-36568711)
chr5 (69-151)||(624285-624365)
chr5 (68-150)||(1028507-1028587)
chr5 (68-153)||(42405585-42405666)
chr5 (18-68)||(1028612-1028661)
chr5 (18-68)||(3295439-3295488)
chr5 (18-68)||(6224210-6224259)
chr5 (68-133)||(6500538-6500601)
chr5 (18-68)||(11417072-11417121)
chr5 (18-68)||(13415855-13415904)
chr5 (68-133)||(18603127-18603190)
chr5 (18-68)||(18603215-18603264)
chr5 (18-68)||(24489299-24489348)
chr5 (18-68)||(26075257-26075306)
chr5 (18-68)||(33747785-33747834)
chr5 (18-68)||(34753120-34753169)
chr5 (18-68)||(35150021-35150070)
chr5 (18-68)||(40296410-40296459)
chr5 (18-68)||(41170648-41170697)
chr5 (18-68)||(42508626-42508675)
chr5 (73-133)||(3295352-3295410)
chr5 (68-124)||(13415776-13415830)
chr5 (68-132)||(32487481-32487543)
chr5 (81-133)||(36492224-36492274)
chr5 (18-67)||(38427562-38427610)
chr5 (69-133)||(40296322-40296384)
chr5 (68-124)||(41170722-41170776)
chr5 (68-151)||(26900006-26900087)
chr5 (68-150)||(36568559-36568637)
[»] chr4 (32 HSPs)
chr4 (68-150)||(39404106-39404186)
chr4 (68-133)||(1731652-1731715)
chr4 (18-68)||(36629251-36629300)
chr4 (68-151)||(25483424-25483505)
chr4 (18-68)||(2740714-2740763)
chr4 (18-68)||(16888909-16888958)
chr4 (68-133)||(36629325-36629388)
chr4 (68-133)||(39792865-39792928)
chr4 (18-68)||(52884709-52884758)
chr4 (18-68)||(52884901-52884950)
chr4 (18-68)||(54343094-54343143)
chr4 (18-68)||(54741271-54741320)
chr4 (68-136)||(32941125-32941191)
chr4 (19-68)||(54108928-54108976)
chr4 (68-151)||(3340895-3340976)
chr4 (68-151)||(54017582-54017663)
chr4 (107-151)||(54936320-54936364)
chr4 (71-133)||(22028374-22028434)
chr4 (18-69)||(41707556-41707606)
chr4 (18-68)||(3244544-3244593)
chr4 (18-68)||(3341142-3341191)
chr4 (18-68)||(10245934-10245983)
chr4 (68-133)||(23817686-23817749)
chr4 (18-68)||(44620310-44620359)
chr4 (68-133)||(44621090-44621153)
chr4 (18-68)||(44621440-44621489)
chr4 (68-133)||(49076836-49076899)
chr4 (18-68)||(54017795-54017844)
chr4 (19-68)||(44621017-44621065)
chr4 (19-68)||(45496820-45496868)
chr4 (68-132)||(54343014-54343076)
chr4 (68-131)||(54108625-54108686)
[»] chr8 (38 HSPs)
chr8 (68-152)||(40518159-40518241)
chr8 (70-151)||(6876851-6876930)
chr8 (18-66)||(41972172-41972219)
chr8 (68-133)||(3038297-3038360)
chr8 (18-68)||(9608759-9608808)
chr8 (18-68)||(25561739-25561788)
chr8 (18-68)||(34834890-34834939)
chr8 (68-133)||(40518670-40518733)
chr8 (18-68)||(41416266-41416315)
chr8 (18-67)||(3670074-3670122)
chr8 (68-136)||(30441173-30441239)
chr8 (68-132)||(34834964-34835026)
chr8 (18-69)||(3038384-3038434)
chr8 (68-150)||(3670148-3670227)
chr8 (72-150)||(40579259-40579335)
chr8 (81-151)||(41972262-41972330)
chr8 (18-61)||(45123020-45123062)
chr8 (18-64)||(147465-147510)
chr8 (18-68)||(1514010-1514059)
chr8 (105-151)||(3037958-3038004)
chr8 (18-68)||(3669701-3669750)
chr8 (18-68)||(5420665-5420714)
chr8 (68-133)||(5915955-5916018)
chr8 (22-64)||(6876961-6877002)
chr8 (18-68)||(9309369-9309418)
chr8 (18-68)||(18372351-18372400)
chr8 (18-68)||(18372794-18372843)
chr8 (18-68)||(25561911-25561960)
chr8 (18-68)||(34835223-34835272)
chr8 (18-64)||(40518596-40518641)
chr8 (18-68)||(45122152-45122201)
chr8 (68-132)||(3669775-3669837)
chr8 (68-132)||(45122712-45122774)
chr8 (68-143)||(70271-70344)
chr8 (107-151)||(9309106-9309150)
chr8 (107-151)||(9309479-9309523)
chr8 (68-150)||(18371983-18372064)
chr8 (18-69)||(40518083-40518135)
[»] chr2 (37 HSPs)
chr2 (68-151)||(14745656-14745737)
chr2 (68-151)||(36005869-36005950)
chr2 (19-67)||(42515031-42515078)
chr2 (18-68)||(40163468-40163517)
chr2 (105-150)||(16591006-16591051)
chr2 (18-66)||(962612-962659)
chr2 (68-153)||(5542612-5542695)
chr2 (18-68)||(6421399-6421448)
chr2 (68-133)||(6422198-6422261)
chr2 (18-68)||(7598623-7598672)
chr2 (18-68)||(28254332-28254381)
chr2 (18-68)||(28531409-28531458)
chr2 (68-133)||(36178612-36178675)
chr2 (18-68)||(36178700-36178749)
chr2 (18-68)||(37106202-37106251)
chr2 (68-151)||(962686-962767)
chr2 (72-150)||(42514741-42514817)
chr2 (18-68)||(5543093-5543142)
chr2 (69-150)||(6421474-6421553)
chr2 (68-134)||(14745299-14745364)
chr2 (18-68)||(14745762-14745811)
chr2 (18-68)||(15880277-15880326)
chr2 (68-133)||(15880351-15880414)
chr2 (18-64)||(23346251-23346296)
chr2 (22-68)||(36178266-36178311)
chr2 (18-68)||(37105938-37105987)
chr2 (68-133)||(37106276-37106339)
chr2 (18-68)||(38796313-38796362)
chr2 (18-68)||(40679724-40679773)
chr2 (18-68)||(40733531-40733580)
chr2 (68-133)||(41283482-41283545)
chr2 (18-68)||(41283570-41283619)
chr2 (18-68)||(42514663-42514712)
chr2 (18-63)||(29676917-29676961)
chr2 (72-151)||(15511485-15511561)
chr2 (20-68)||(28254207-28254254)
chr2 (18-62)||(36785664-36785707)
[»] chr6 (27 HSPs)
chr6 (68-150)||(16454995-16455075)
chr6 (18-68)||(2378140-2378189)
chr6 (22-68)||(10074458-10074503)
chr6 (18-68)||(10911579-10911629)
chr6 (26-68)||(16107700-16107741)
chr6 (81-150)||(16454676-16454743)
chr6 (18-68)||(29518517-29518566)
chr6 (18-68)||(29518934-29518983)
chr6 (18-68)||(32741193-32741242)
chr6 (19-68)||(593804-593852)
chr6 (18-67)||(3058240-3058288)
chr6 (18-68)||(1950280-1950329)
chr6 (18-68)||(2377768-2377817)
chr6 (18-68)||(2579967-2580016)
chr6 (18-68)||(3409273-3409322)
chr6 (18-68)||(5832121-5832170)
chr6 (18-68)||(9062444-9062493)
chr6 (18-68)||(10074086-10074135)
chr6 (18-64)||(14748437-14748482)
chr6 (18-68)||(26544063-26544112)
chr6 (68-133)||(29518591-29518654)
chr6 (68-133)||(29519008-29519071)
chr6 (18-68)||(32460675-32460724)
chr6 (68-133)||(32741267-32741330)
chr6 (18-68)||(35210218-35210267)
chr6 (19-68)||(1846763-1846811)
chr6 (18-68)||(10073711-10073758)
[»] chr7 (22 HSPs)
chr7 (18-68)||(45434650-45434699)
chr7 (68-133)||(1085623-1085686)
chr7 (18-68)||(7517594-7517643)
chr7 (18-68)||(7554039-7554088)
chr7 (18-68)||(22566757-22566806)
chr7 (18-68)||(30255353-30255402)
chr7 (68-131)||(40094783-40094844)
chr7 (18-69)||(43241509-43241559)
chr7 (18-68)||(118396-118445)
chr7 (18-68)||(1085711-1085760)
chr7 (18-68)||(8128536-8128585)
chr7 (18-68)||(11845205-11845254)
chr7 (18-68)||(24177449-24177498)
chr7 (18-68)||(29157579-29157628)
chr7 (18-68)||(30244284-30244333)
chr7 (18-68)||(30245091-30245140)
chr7 (18-68)||(30245508-30245557)
chr7 (18-68)||(37533105-37533154)
chr7 (18-67)||(36622974-36623022)
chr7 (68-155)||(22567024-22567109)
chr7 (68-151)||(30032655-30032736)
chr7 (18-66)||(34218131-34218178)
[»] chr3 (30 HSPs)
chr3 (18-68)||(1634409-1634459)
chr3 (18-68)||(29644997-29645046)
chr3 (18-68)||(12114657-12114706)
chr3 (18-68)||(21832438-21832487)
chr3 (18-68)||(35946536-35946585)
chr3 (68-133)||(41359498-41359561)
chr3 (68-133)||(42342097-42342160)
chr3 (68-133)||(42342395-42342458)
chr3 (18-66)||(31190031-31190078)
chr3 (68-147)||(37990632-37990709)
chr3 (18-69)||(3135167-3135217)
chr3 (18-68)||(11661549-11661598)
chr3 (18-68)||(22304583-22304632)
chr3 (18-68)||(29644676-29644725)
chr3 (18-68)||(33175759-33175808)
chr3 (18-68)||(33803347-33803396)
chr3 (68-133)||(37990984-37991047)
chr3 (18-68)||(39935050-39935099)
chr3 (18-68)||(42342483-42342532)
chr3 (18-68)||(42584917-42584966)
chr3 (68-133)||(43346798-43346861)
chr3 (18-68)||(43346886-43346935)
chr3 (18-68)||(45901727-45901777)
chr3 (18-68)||(50612547-50612596)
chr3 (18-68)||(52634690-52634739)
chr3 (18-68)||(54017911-54017960)
chr3 (68-136)||(22304657-22304723)
chr3 (68-131)||(41359774-41359835)
chr3 (20-68)||(49336782-49336829)
chr3 (68-131)||(54018207-54018268)
[»] chr1 (33 HSPs)
chr1 (68-151)||(41142460-41142542)
chr1 (69-136)||(32168702-32168767)
chr1 (18-69)||(41142386-41142436)
chr1 (18-68)||(3537242-3537291)
chr1 (68-133)||(3537606-3537669)
chr1 (18-68)||(9955921-9955971)
chr1 (18-68)||(22077590-22077639)
chr1 (18-68)||(37556125-37556175)
chr1 (18-68)||(44290920-44290969)
chr1 (81-153)||(44290811-44290881)
chr1 (18-66)||(34649452-34649499)
chr1 (18-68)||(66567-66616)
chr1 (18-68)||(3537694-3537743)
chr1 (18-68)||(3550734-3550783)
chr1 (18-68)||(3875426-3875475)
chr1 (18-68)||(5575118-5575167)
chr1 (18-68)||(17294591-17294640)
chr1 (18-64)||(24132084-24132129)
chr1 (18-68)||(31767256-31767305)
chr1 (18-68)||(34364521-34364570)
chr1 (68-133)||(34649526-34649589)
chr1 (18-68)||(40082421-40082470)
chr1 (68-153)||(40082494-40082577)
chr1 (18-68)||(44290553-44290602)
chr1 (18-68)||(45084396-45084445)
chr1 (18-68)||(50052118-50052167)
chr1 (81-133)||(21378066-21378116)
chr1 (19-68)||(48588583-48588631)
chr1 (18-66)||(5320062-5320109)
chr1 (18-66)||(26661619-26661666)
chr1 (68-131)||(37555817-37555878)
chr1 (68-131)||(37556199-37556260)
chr1 (68-131)||(41157079-41157140)
[»] scaffold0702 (2 HSPs)
scaffold0702 (18-68)||(237-286)
scaffold0702 (18-68)||(609-658)
[»] scaffold0734 (2 HSPs)
scaffold0734 (18-68)||(5410-5459)
scaffold0734 (18-68)||(5791-5840)
[»] scaffold0078 (1 HSPs)
scaffold0078 (18-68)||(5371-5420)
[»] scaffold0391 (1 HSPs)
scaffold0391 (107-151)||(1095-1139)


Alignment Details
Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 34753095 - 34753014
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||| ||| |||||||||||| ||||||||||||| |  |||||||||||||| |||||||| ||||||| |||||||||    
T  34753095 aaggttttgggtaagagtgtggcgtctctcttgcttgtgcg--gttgttctagcctcgatgtggacggtttcccaagctccccc 34753014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 25328023 - 25328103
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    |||||||| ||| ||||||||| || ||||||||  ||||  |||||||||||||||||||||||| ||  ||||||||||||    
T  25328023 aaggttttgggtaagagtgtggtgtctctcttgcaagtgt--ggttgttctagcctcaatgtggacggtcccccgagctcccc 25328103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 299503 - 299552
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  299503 atatgtcccacatcggata-aaacagtaaaggttgaacaccttataagtaa 299552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 3295159 - 3295110
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  3295159 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 3295110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 27502180 - 27502131
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  27502180 atatgtcccacattggata-aaatagtaaaggttaaacaccttataagtaa 27502131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 36492361 - 36492312
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  36492361 atatgtcccacatcggata-aaagagtaaaggttgaacaccttataagtaa 36492312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 41632796 - 41632845
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  41632796 atatgtctcacatcggatagaaaa-gtaaaggttgaacaccttataagtaa 41632845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 15370187 - 15370268
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||| ||| ||||||||| || ||||||||||||| |   ||||||||||||| |||||||| ||  |||||||||||||    
T  15370187 aaggttttgggtaagagtgtggtgtctctcttgcttgtggga--ttgttctagcctcgatgtggacggtcccccgagctccccc 15370268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 36568711 - 36568664
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagt 66  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  36568711 atatgtcccacatcggatag-aaaagtaaaagttgaacaccttataagt 36568664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 624285 - 624365
Alignment:
Q  69 aggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    ||||||| ||| ||||||||| || |||||  |||||| |  |||||||||||||| |||||||| ||| |||||||||||||    
T  624285 aggttttgggtaagagtgtggtgtctctctcacttgtggg--gttgttctagcctcgatgtggacggttccccgagctccccc 624365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 1028587 - 1028507
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    |||||||||||| |||||||||||| |||||  ||  |||| ||||||||||||||| |||||||| ||  ||| ||||||||    
T  1028587 aaggtttttggtaagagtgtggcgtctctctcact--tgtgcggttgttctagcctcgatgtggacggtccccctagctcccc 1028507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 42405666 - 42405585
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccccca 153  Q
    |||||||| ||| ||||||||| ||  |||||||||||| |  |||||||||||||| |||||||| ||  |||||||||||||||    
T  42405666 aaggttttgggtaagagtgtggtgt--ctcttgcttgtgcg--gttgttctagcctcgatgtggacggtcccccgagctcccccca 42405585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 1028661 - 1028612
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||| ||||||||||| | ||||| ||||||||||    
T  1028661 atatgtcccacatcggatag-aaaagtaaaggatgaacactttataagtaa 1028612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 3295488 - 3295439
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  3295488 atatgttccacatcggata-aaatagtaaaggttgaacaccttataagtaa 3295439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 6224210 - 6224259
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||| ||||||| ||| |||||||||| ||||||||||||||||    
T  6224210 atatgtcccacttcggata-aaagagtaaaggttgaacaccttataagtaa 6224259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 6500538 - 6500601
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||  |||| ||||||||||||||| ||||||||    
T  6500538 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagcctcgatgtggac 6500601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 11417121 - 11417072
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  11417121 atatgttccacatcggata-aaatagtaaaggttgaacaccttataagtaa 11417072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 13415904 - 13415855
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||  |||||||||| ||||||||||||||||    
T  13415904 atatgtcccacatcggata-aattagtaaaggttgaacaccttataagtaa 13415855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 18603190 - 18603127
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||||||| | |||||||||||  |||||| ||||||||||| ||||||||    
T  18603190 aaggttttgggtaagagtgtggcatctctcttgcttg--tgtggtagttctagcctcgatgtggac 18603127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 18603264 - 18603215
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  18603264 atatgtcccacatcagata-aaatagtaaaggttgaacaccttataagtaa 18603215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 24489348 - 24489299
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| ||||||||| | |||||||||||||||||| |||||    
T  24489348 atatgtcccacatcagatagaaaa-gaaaaggttaaacaccttattagtaa 24489299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 26075306 - 26075257
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  26075306 atatgtctcacatcggata-aaagagtaaaggttgaacaccttataagtaa 26075257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 33747785 - 33747834
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| ||||||||||||| || ||||||||||    
T  33747785 atatgtcccacatcggata-aaatagtaaaggttaaatactttataagtaa 33747834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 34753169 - 34753120
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||| |||||||||| ||||| ||| ||||||||||||||||    
T  34753169 atatgtcccacattggatagaaaa-gtaaaagttgaacaccttataagtaa 34753120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 35150021 - 35150070
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| ||| |||||| ||||||||||||||||    
T  35150021 atatgtcccacatcggata-aaagagtcaaggttgaacaccttataagtaa 35150070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 40296459 - 40296410
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| || ||||||| ||||||||||||||||    
T  40296459 atatgtcccacatcggata-aaatagaaaaggttgaacaccttataagtaa 40296410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 41170648 - 41170697
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| |||| |||||||||||    
T  41170648 atatgtcccacatcggata-aaatagtaaaggttgaacatcttataagtaa 41170697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 42508626 - 42508675
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||| ||||||||||||||||||| |||||||||||||| || ||||||||    
T  42508626 atatatcccacatcggatagaaaa-gtaaaggttaaacatctaataagtaa 42508675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 3295410 - 3295352
Alignment:
Q  73 ttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    ||||||| ||||||||  || |||||||||||||||  |||||||||||||| ||||||||    
T  3295410 ttttggtaagagtgtgttgtctctcttgcttgtgtg--gttgttctagcctcgatgtggac 3295352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 13415830 - 13415776
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctc 124  Q
    |||||||| ||| |||||||||||| |||||||||  |||| |||||||||||||||    
T  13415830 aaggttttgggtaagagtgtggcgtctctcttgct--tgtgcggttgttctagcctc 13415776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 32487481 - 32487543
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgga 132  Q
    |||||||| ||| |||||||| ||| |||||||||| ||||  |||||||||||||| |||||||    
T  32487481 aaggttttgggtaagagtgtgacgtatctcttgcttatgtg--gttgttctagcctcgatgtgga 32487543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 36492274 - 36492224
Alignment:
Q  81 agagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    ||||||||| || |||||||||||||||  |||||||||||||| ||||||||    
T  36492274 agagtgtggtgtctctcttgcttgtgtg--gttgttctagcctcgatgtggac 36492224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 38427562 - 38427610
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagta 67  Q
    ||||||||||||| |||||||||| ||||||||| |||| ||||||||||    
T  38427562 atatgtcccacattggatagaaaa-gtaaaggttgaacatcttataagta 38427610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 40296384 - 40296322
Alignment:
Q  69 aggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    ||||||| ||| ||||||||| || |||||||||  |||| ||||||||||||||| ||||||||    
T  40296384 aggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagcctcgatgtggac 40296322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 41170722 - 41170776
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctc 124  Q
    |||||||| ||| ||||||||| |||| |||||||  ||||||||||||||||||||    
T  41170722 aaggttttgggtaagagtgtggtgtttttcttgct--tgtgtggttgttctagcctc 41170776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 26900087 - 26900006
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||| ||| ||||||||| || ||||||||||||| ||  ||||||||||||  |||||||| ||  ||| |||||||||    
T  26900087 aaggttttgggtaagagtgtggtgtctctcttgcttgtgggt--ttgttctagccttgatgtggacggtcccccaagctccccc 26900006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 36568637 - 36568559
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    |||||||||||| |||||||||||| |||||  ||  ||||||||||||||| |||| |||||||  ||  ||||||||||||    
T  36568637 aaggtttttggtaagagtgtggcgtctctct--ct--tgtgtggttgttctatcctcgatgtggaaggtcccccgagctcccc 36568559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 39404106 - 39404186
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    |||||||| ||| |||||||||||| |||||||||||||  |||||||||||||||| |||||||| ||  ||||||||||||    
T  39404106 aaggttttgggtaagagtgtggcgtctctcttgcttgtg--tggttgttctagcctcgatgtggacggtcccccgagctcccc 39404186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 1731715 - 1731652
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  1731715 aaggttttgggtaagagtgtggtgtttctcttgcttgtgtg--gttgttctagcctcaatgtggac 1731652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 36629251 - 36629300
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  36629251 atatgtcccacatcggatagaaaa-gtaaaagttaaacaccttataagtaa 36629300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 25483424 - 25483505
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||| ||| ||||||||| || |||||||||||||  |||||||||||||||| |||||||| || ||||  ||||||||    
T  25483424 aaggttttgggtaagagtgtggtgtctctcttgcttgtg--tggttgttctagcctcgatgtggacggtctccctggctccccc 25483505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 2740714 - 2740763
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  2740714 atatgtcccacatcggatagaaca-gtaaaggttgaacaccttataagtaa 2740763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 16888958 - 16888909
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  16888958 atatgtcccacatcggatag-aaaagtaaaggttgaataccttataagtaa 16888909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 36629325 - 36629388
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||  |||||||||||||||||||| ||||||||    
T  36629325 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgtggttgttctagcctcgatgtggac 36629388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 39792928 - 39792865
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||||||||  |||||||||||||| ||||||||    
T  39792928 aaggttttgggtaagagtgtggtgtctctcttgcttgtgtg--gttgttctagcctcgatgtggac 39792865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 52884709 - 52884758
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  52884709 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 52884758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 52884901 - 52884950
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  52884901 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 52884950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 54343143 - 54343094
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  54343143 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 54343094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 54741320 - 54741271
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  54741320 atatgtctcacatcggatagaaaa-gtaaaggttgaacaccttataagtaa 54741271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 32941191 - 32941125
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagt 136  Q
    |||||||| ||| |||||||| ||| ||||||||||||| |  |||||||||||||| |||||||||||    
T  32941191 aaggttttgggtaagagtgtgacgtctctcttgcttgtgcg--gttgttctagcctcgatgtggacagt 32941125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 54108928 - 54108976
Alignment:
Q  19 tatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  54108928 tatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 54108976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 3340895 - 3340976
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||| ||| ||||||||| || | ||||||||||| |  |||||||||||||| |||||||| || ||| ||||||||||    
T  3340895 aaggttttgggtaagagtgtggtgtctttcttgcttgtggg--gttgttctagcctcgatgtggacggtctcctgagctccccc 3340976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 54017663 - 54017582
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||| ||| ||||||||  || |||||||||| ||||  |||||||||||||| |||||||| || |||| |||||||||    
T  54017663 aaggttttaggtaagagtgtgatgtctctcttgcttatgtg--gttgttctagcctcgatgtggacggtctccctagctccccc 54017582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 54936320 - 54936364
Alignment:
Q  107 tgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||||||||||||| |||||||||||  |||||||||||||    
T  54936320 tgtggttgttctagcctcgatgtggacagtcccccgagctccccc 54936364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 22028434 - 22028374
Alignment:
Q  71 gtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    ||||| ||| ||||||||| || ||||||||||||| |  |||||||||||||||||||||||    
T  22028434 gttttgggtaagagtgtggtgtctctcttgcttgtgag--gttgttctagcctcaatgtggac 22028374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 41707606 - 41707556
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaaa 69  Q
    ||||||||||||||||||| ||| |||||||||| |||||| ||||||||||    
T  41707606 atatgtcccacatcggata-aaagagtaaaggttgaacaccatataagtaaa 41707556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 3244593 - 3244544
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| |||||||||||||||| ||||||||| |||| |||||||||||    
T  3244593 atatgtctcacatcggatagaaaa-gtaaaggttgaacatcttataagtaa 3244544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 3341142 - 3341191
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||| ||||| ||| |||||||||||||||| ||||||||||    
T  3341142 atatgtcccacattggata-aaagagtaaaggttaaacactttataagtaa 3341191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 10245934 - 10245983
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||| ||||||||||||| ||| |||||||||| ||||||||||||||||    
T  10245934 atatgccccacatcggata-aaagagtaaaggttgaacaccttataagtaa 10245983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 23817749 - 23817686
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || ||||||||| |||||  |||||||||||||| ||||||||    
T  23817749 aaggttttgggtaagagtgtggtgtctctcttgctagtgtg--gttgttctagcctcgatgtggac 23817686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 44620310 - 44620359
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  44620310 atatgtcccacatgggata-aaatagtaaaggttgaacaccttataagtaa 44620359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 44621090 - 44621153
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| ||||||||||||  |||| |||| |||||||||| ||||||||    
T  44621090 aaggttttgggtaagagtgtggtgtttctcttgct--tgtgcggttattctagcctcgatgtggac 44621153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 44621440 - 44621489
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||| |||| ||||| ||| |||||||||||||||||||||||||||    
T  44621440 atatgtccaacatgggata-aaacagtaaaggttaaacaccttataagtaa 44621489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 49076899 - 49076836
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||||||||||||| || | |||||||  |||| ||||||||||||||| ||||||||    
T  49076899 aaggttttgggttagagtgtggtgtctttcttgct--tgtgcggttgttctagcctcgatgtggac 49076836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 54017844 - 54017795
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  54017844 atatatcccacatcggata-aaacagtaaaggttgaacaccttataagtaa 54017795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 44621017 - 44621065
Alignment:
Q  19 tatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||| ||||||||||||| ||| |||||||||| ||||||||||||||||    
T  44621017 tatgacccacatcggata-aaacagtaaaggttgaacaccttataagtaa 44621065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 45496820 - 45496868
Alignment:
Q  19 tatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||| |||  ||||||||| ||||||||||||||||    
T  45496820 tatgtcccacatcggata-aaatcgtaaaggttgaacaccttataagtaa 45496868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 54343076 - 54343014
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgga 132  Q
    |||||||| ||| ||||||||| || ||||||||||| |||  |||||||||||||| |||||||    
T  54343076 aaggttttgggtaagagtgtggtgtctctcttgcttgagtg--gttgttctagcctcgatgtgga 54343014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 54108625 - 54108686
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgg 131  Q
    |||||||| | | ||||||||| || | |||||||||||  |||||||||||||||||||||||    
T  54108625 aaggttttggctaagagtgtggtgtctatcttgcttgtg--tggttgttctagcctcaatgtgg 54108686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 40518159 - 40518241
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccccc 152  Q
    |||||||| ||| |||||||||||| |||||||||  |||||||||||||||||||  |||||||| ||  ||||||||||||||    
T  40518159 aaggttttgggtaagagtgtggcgtctctcttgct--tgtgtggttgttctagccttgatgtggacggtcccccgagctcccccc 40518241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 6876930 - 6876851
Alignment:
Q  70 ggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||| ||| ||||||||| |||||||||| |||||||  |||||||||||||| |||||||| ||  |||||||||||||    
T  6876930 ggttttgggtaagagtgtggtgtttctcttgtttgtgtg--gttgttctagcctcgatgtggacggtcccccgagctccccc 6876851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 41972172 - 41972219
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagt 66  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  41972172 atatgtcccacatcggatag-aaaagtaaaggttgaacaccttataagt 41972219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 3038360 - 3038297
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||||||| | |||||||||||||||  |||||||||||||| ||||||||    
T  3038360 aaggttttgggtaagagtgtggcatctctcttgcttgtgtg--gttgttctagcctcgatgtggac 3038297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 9608759 - 9608808
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  9608759 atatgtcccatatcggatagaaaa-gtaaaggttgaacaccttataagtaa 9608808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 25561788 - 25561739
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  25561788 atatgtcccacatcggata-aaagagtaaaggttgaacaccttataagtaa 25561739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 34834890 - 34834939
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  34834890 atatgtcccacattggata-aaatagtaaaggttaaacaccttataagtaa 34834939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 40518670 - 40518733
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||||| |||  ||||||||||||  |||||||||||||||||||||||||    
T  40518670 aaggttttgggtaagagtgtgacgtcactcttgcttgtg--tggttgttctagcctcaatgtggac 40518733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 41416315 - 41416266
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  41416315 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 41416266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 3670074 - 3670122
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagta 67  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  3670074 atatgtcccacatcggata-aaatagtaaaggtttaacaccttataagta 3670122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 30441173 - 30441239
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagt 136  Q
    |||||||| ||| ||||||||| || ||||||||||||| |  |||||||||||||| |||||||||||    
T  30441173 aaggttttgggtaagagtgtggtgtctctcttgcttgtgcg--gttgttctagcctcgatgtggacagt 30441239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 34834964 - 34835026
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgga 132  Q
    |||||||| ||| ||||||||| || |||||||||  |||||||||||||||||||| |||||||    
T  34834964 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgtggttgttctagcctcgatgtgga 34835026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 3038434 - 3038384
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaaa 69  Q
    ||||||||||||||||||| ||| |||||||||| ||||| |||||||||||    
T  3038434 atatgtcccacatcggata-aaatagtaaaggttgaacactttataagtaaa 3038384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 3670148 - 3670227
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    |||||||| ||| ||||||||| || |||||||||  |||| ||||||||||||||| |||||||| | ||||| ||||||||    
T  3670148 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagcctcgatgtggac-ggttccctagctcccc 3670227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 40579335 - 40579259
Alignment:
Q  72 tttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    |||| ||| ||||||||| || ||||||||||||| |  |||||||||||||| |||||||| ||  ||||||||||||    
T  40579335 ttttgggtaagagtgtggtgtctctcttgcttgtgcg--gttgttctagcctcgatgtggactgtcccccgagctcccc 40579259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 41972262 - 41972330
Alignment:
Q  81 agagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    ||||||||||||  ||||||||||||  ||||||||| ||||||||| ||||| || |||||| |||||||    
T  41972262 agagtgtggcgtcactcttgcttgtg--tggttgttccagcctcaatatggacggtctcccgaactccccc 41972330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 45123020 - 45123062
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacacctta 61  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  45123020 atatgtcccacatcggata-aaatagtaaaggttaaacacctta 45123062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 147465 - 147510
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataa 64  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  147465 atatgtcccacatcggata-aaagagtaaaggttgaacaccttataa 147510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 1514059 - 1514010
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  1514059 atatatcccacatcggata-aaagagtaaaggttgaacaccttataagtaa 1514010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 3038004 - 3037958
Alignment:
Q  105 tgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||||||||||||||| |||||||| ||  |||||||||||||    
T  3038004 tgtgtggttgttctagcctcgatgtggacggtcccccgagctccccc 3037958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 3669701 - 3669750
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  3669701 atatgtcccacatcagata-aaatagtaaaggttgaacaccttataagtaa 3669750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 5420665 - 5420714
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||| || |||||||||| |||| |||||||||||    
T  5420665 atatgtcccacatcggatag-aatagtaaaggttgaacatcttataagtaa 5420714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 5915955 - 5916018
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||  |||| ||||||||||||||| ||||||||    
T  5915955 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagcctcgatgtggac 5916018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 6877002 - 6876961
Alignment:
Q  22 gtcccacatcggatagaaaaagtaaaggttaaacaccttataa 64  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  6877002 gtcccacatcggata-aaaaagtaaaggttgaacaccttataa 6876961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 9309369 - 9309418
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||| ||| ||||||||||||||||    
T  9309369 atatgtcccacatcggata-aaagagtaaatgttgaacaccttataagtaa 9309418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 18372400 - 18372351
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  18372400 atatgtctcacatcggata-aaatagtaaaggttgaacaccttataagtaa 18372351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 18372843 - 18372794
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  18372843 atatgtcacacatcggata-aaatagtaaaggttgaacaccttataagtaa 18372794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 25561960 - 25561911
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||| ||| ||||||||||||||||    
T  25561960 atatgtcccacatcggata-aaagagtaaacgttgaacaccttataagtaa 25561911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 34835223 - 34835272
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  34835223 atatgtcccacatccgata-aaatagtaaaggttgaacaccttataagtaa 34835272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 40518596 - 40518641
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataa 64  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  40518596 atatgtcccacatcagatagaaaa-gtaaaggttgaacaccttataa 40518641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 45122201 - 45122152
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  45122201 atatgtctcacatcggata-aaatagtaaaggttgaacaccttataagtaa 45122152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 3669775 - 3669837
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgga 132  Q
    |||||||| ||| ||||||||| || |||||||||  |||| ||||||||||||||| |||||||    
T  3669775 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagcctcgatgtgga 3669837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 45122712 - 45122774
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgga 132  Q
    |||||||| |||  ||||||||||| |||||||||  ||||||||||||| |||||| |||||||    
T  45122712 aaggttttgggtatgagtgtggcgtctctcttgct--tgtgtggttgttcaagcctcgatgtgga 45122774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 70344 - 70271
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccga 143  Q
    |||||||| ||| |||||||| ||| | |||||||||||||  ||||||||| |||||||| |||| || ||||||    
T  70344 aaggttttaggtaagagtgtgacgtctatcttgcttgtgtg--gttgttctaacctcaatgcggacggtctcccga 70271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 9309106 - 9309150
Alignment:
Q  107 tgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||||||||||||| |||||||| ||  |||||||||||||    
T  9309106 tgtggttgttctagcctcgatgtggacggtcccccgagctccccc 9309150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 9309479 - 9309523
Alignment:
Q  107 tgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||||||||||||| |||||||| ||  |||||||||||||    
T  9309479 tgtggttgttctagcctcgatgtggacggtcccccgagctccccc 9309523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 18372064 - 18371983
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtt-tcccgagctcccc 150  Q
    |||||||| ||| ||||||||| |||||||| ||||||| |  |||| ||||||||||||||| || |||  ||||||||||||    
T  18372064 aaggttttgggtaagagtgtggtgtttctctcgcttgtgcg--gttgctctagcctcaatgtgaacggttcccccgagctcccc 18371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 40518083 - 40518135
Alignment:
Q  18 atatgtcccacatcggatagaaaa-agtaaaggttaaacaccttataagtaaa 69  Q
    |||||| |||||| ||||| |||| |||||||||| |||||||||||||||||    
T  40518083 atatgttccacattggataaaaaaaagtaaaggttgaacaccttataagtaaa 40518135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 14745737 - 14745656
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||| ||| |||||||||||| ||||||||  |||||  |||||||||||||| |||||||||||  |||||||||||||    
T  14745737 aaggttttgggtaagagtgtggcgtctctcttgcaagtgtg--gttgttctagcctcgatgtggacagtcccccgagctccccc 14745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 36005950 - 36005869
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||| ||| | |||||||||| ||||||||||||| |  |||||||||||||| ||||||||||| || |||||||||||    
T  36005950 aaggttttgggtaaaagtgtggcgtctctcttgcttgtggg--gttgttctagcctcgatgtggacagtctctcgagctccccc 36005869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 42515031 - 42515078
Alignment:
Q  19 tatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagta 67  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42515031 tatgtcccacatcggatagaaaa-gtaaaggttaaacaccttataagta 42515078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 40163517 - 40163468
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  40163517 atatgtcccacatcggatagaaaa-gtaaaggttgaacaccttataagtaa 40163468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 16591006 - 16591051
Alignment:
Q  105 tgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||    
T  16591006 tgtggggttgttctagcctcaatgtggacagtctcccgagctcccc 16591051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 962612 - 962659
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagt 66  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  962612 atatgtcccacatcggatag-aaaagtaaaggttgaacaccttataagt 962659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 5542695 - 5542612
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccccca 153  Q
    |||||||||||| ||||||||| || |||||||||  |||| |||||||| || ||| |||||||| ||  |||||||||||||||    
T  5542695 aaggtttttggtaagagtgtggtgtctctcttgct--tgtgcggttgttcaagtctcgatgtggacggtcccccgagctcccccca 5542612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 6421399 - 6421448
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  6421399 atatgtcccacatcggata-aaagagtaaaggttgaacaccttataagtaa 6421448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 6422198 - 6422261
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||  |||||||||||||||||||| ||||||||    
T  6422198 aaggttttaggtaagagtgtggtgtctctcttgct--tgtgtggttgttctagcctcgatgtggac 6422261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 7598623 - 7598672
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  7598623 atatgtcccacatcagata-aaaaagtaaaggttgaacaccttataagtaa 7598672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 28254381 - 28254332
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  28254381 atatgtcccacatcggatag-aaaagtaaaggttgaacatcttataagtaa 28254332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 28531458 - 28531409
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  28531458 atatgtcccacatcggatag-aaaagcaaaggttgaacaccttataagtaa 28531409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 36178675 - 36178612
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||||||||  |||||||||||||| ||||||||    
T  36178675 aaggttttgggtaagagtgtggtgtctctcttgcttgtgtg--gttgttctagcctctatgtggac 36178612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 36178749 - 36178700
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  36178749 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 36178700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 37106202 - 37106251
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  37106202 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 37106251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 962686 - 962767
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||| ||| ||||||||  ||  ||||||||||||  |||||||||||||||| |||||||| || |||||| |||||||    
T  962686 aaggttttgggtaagagtgtgttgtcactcttgcttgtg--tggttgttctagcctcgatgtggacggtctcccgaactccccc 962767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 42514741 - 42514817
Alignment:
Q  72 tttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    |||| ||| |||||||||||| |||||| |||||| |  |||||||||||||| |||||||| ||  ||||||||||||    
T  42514741 ttttgggtaagagtgtggcgtctctcttacttgtggg--gttgttctagcctcgatgtggacggtcccccgagctcccc 42514817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 5543142 - 5543093
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  5543142 atatgtcccacatccgata-aaatagtaaaggttgaacaccttataagtaa 5543093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 6421474 - 6421553
Alignment:
Q  69 aggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    ||||||| ||| ||||||||| || |||||||||  |||| ||||||||||| ||| |||||||| ||  ||||||||||||    
T  6421474 aggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagtctcgatgtggacggtcccccgagctcccc 6421553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 14745364 - 14745299
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggaca 134  Q
    |||||||| ||| |||||||||||| |||||||   ||| ||||||||||||||||| |||||||||    
T  14745364 aaggttttgggtaagagtgtggcgtctctcttgtaagtg-gtggttgttctagcctcgatgtggaca 14745299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 14745811 - 14745762
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  14745811 atatgtcccacattggata-aaatagtaaaggttgaacaccttataagtaa 14745762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 15880277 - 15880326
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  15880277 atatgttccacatcggata-aaagagtaaaggttgaacaccttataagtaa 15880326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 15880351 - 15880414
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||||||||| |||||||||  |||| ||||||| ||||||| ||||||||    
T  15880351 aaggttttgggtaagagtgtggcgtctctcttgct--tgtgcggttgttttagcctcgatgtggac 15880414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 23346251 - 23346296
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataa 64  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  23346251 atatgtctcacatcgtatagaaaa-gtaaaggttaaacaccttataa 23346296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 36178311 - 36178266
Alignment:
Q  22 gtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  36178311 gtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 36178266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 37105938 - 37105987
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||| ||| ||| |||||||||| ||||||||||||||||    
T  37105938 atatgtcccacatcgaata-aaatagtaaaggttgaacaccttataagtaa 37105987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 37106276 - 37106339
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| ||||||||||||  |||| | ||||||||||||| ||||||||    
T  37106276 aaggttttgggtaagagtgtggtgtttctcttgct--tgtgcgattgttctagcctcgatgtggac 37106339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 38796362 - 38796313
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||| ||| ||||||||||||||||    
T  38796362 atatgtcccacatcggata-aaacagtaaatgttgaacaccttataagtaa 38796313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 40679773 - 40679724
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  40679773 atatgtcccatatcggatagaaaa-gtaagggttgaacaccttataagtaa 40679724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 40733531 - 40733580
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| |||||||||| ||| ||||||||||||||||    
T  40733531 atatgtcccacatcagata-aaaaagtaaatgttgaacaccttataagtaa 40733580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 41283545 - 41283482
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||||||||| |||||||  | |||||||||||||||||||  ||||||||    
T  41283545 aaggttttaggtaagagtgtggcgtctctcttg--tttgtgtggttgttctagccttgatgtggac 41283482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 41283619 - 41283570
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||| |||||||| ||| |||||||||| ||||||||||||||||    
T  41283619 atatgtcccatatcggata-aaatagtaaaggttgaacaccttataagtaa 41283570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 42514663 - 42514712
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||| ||||| ||||||||| ||||||||| ||||||||||||||||    
T  42514663 atatgtcctacatcagatagaaaa-gtaaaggttgaacaccttataagtaa 42514712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 29676917 - 29676961
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttata 63  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||    
T  29676917 atatgtcccacatcggata-aaagagtaaaggtttaacaccttata 29676961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 15511561 - 15511485
Alignment:
Q  72 tttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||| ||| ||||||||| || |||||||||||||||  |||||||||| ||| |||||||| | | |||||||||||||    
T  15511561 ttttgggtaagagtgtggtgtctctcttgcttgtgtg--gttgttctagtctcgatgtggac-gatccccgagctccccc 15511485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 28254254 - 28254207
Alignment:
Q  20 atgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||| |||||||||||||||| ||||||||| ||||| ||||||||||    
T  28254254 atgtctcacatcggatagaaaa-gtaaaggttgaacactttataagtaa 28254207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 36785707 - 36785664
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttat 62  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||    
T  36785707 atatgtcccacatcggata-aaatagtaaaggttgaacaccttat 36785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 16454995 - 16455075
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    |||||||| ||| |||||||||||| |||||||||  |||| ||||||||||||||| |||||||| ||  ||||||||||||    
T  16454995 aaggttttgggtaagagtgtggcgtctctcttgct--tgtgcggttgttctagcctcgatgtggacggtcccccgagctcccc 16455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 2378140 - 2378189
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  2378140 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 2378189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 10074503 - 10074458
Alignment:
Q  22 gtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  10074503 gtcccacatcggatagaaaa-gtaaaggttgaacaccttataagtaa 10074458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 10911579 - 10911629
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  10911579 atatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaa 10911629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 16107700 - 16107741
Alignment:
Q  26 cacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  16107700 cacatcggata-aaaaagtaaaggttaaacaccttataagtaa 16107741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 16454676 - 16454743
Alignment:
Q  81 agagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccc 150  Q
    |||||||||||| ||||||||||||| |  |||||||||||||| |||||||| ||  ||||||||||||    
T  16454676 agagtgtggcgtctctcttgcttgtgcg--gttgttctagcctcgatgtggacggtcccccgagctcccc 16454743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 29518517 - 29518566
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  29518517 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 29518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 29518934 - 29518983
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  29518934 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 29518983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 32741193 - 32741242
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  32741193 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 32741242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 593852 - 593804
Alignment:
Q  19 tatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  593852 tatgtcccacatcggata-aaagagtaaaggttgaacaccttataagtaa 593804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 3058240 - 3058288
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagta 67  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  3058240 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagta 3058288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 1950329 - 1950280
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||| ||||||    
T  1950329 atatgtcccacatcggata-aaagagtaaaggttgaacaccttacaagtaa 1950280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 2377768 - 2377817
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||| || ||| |||||||||| ||||||||||||||||    
T  2377768 atatgtcccacatcggtta-aaagagtaaaggttgaacaccttataagtaa 2377817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 2580016 - 2579967
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||| ||||||||||    
T  2580016 atatgtcccacatcggata-aaagagtaaaggttgaacacattataagtaa 2579967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 3409273 - 3409322
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  3409273 atatgtcccacatcagata-aaatagtaaaggttgaacaccttataagtaa 3409322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 5832170 - 5832121
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  5832170 atatgtcccacattggata-aaagagtaaaggttgaacaccttataagtaa 5832121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 9062493 - 9062444
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| |||| |||||||||||    
T  9062493 atatgtcccacatcggata-aaatagtaaaggttgaacatcttataagtaa 9062444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 10074135 - 10074086
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||| ||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  10074135 atatatcccacatcggatagaaaa-gtaaacgttgaacaccttataagtaa 10074086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 14748482 - 14748437
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataa 64  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  14748482 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataa 14748437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 26544063 - 26544112
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||| ||||||||||    
T  26544063 atatgtcccacatcggata-aaatagtaaaggttgaacacgttataagtaa 26544112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 29518591 - 29518654
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||  |||| ||||||||||||||| ||||||||    
T  29518591 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagcctcgatgtggac 29518654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 29519008 - 29519071
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||  |||| ||||||||||||||| ||||||||    
T  29519008 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagcctcgatgtggac 29519071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 32460724 - 32460675
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||| ||| ||| |||||||||| ||||||||||||||||    
T  32460724 atatgtcccacatcgtata-aaatagtaaaggttgaacaccttataagtaa 32460675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 32741267 - 32741330
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||  |||| ||||||||||||||| ||||||||    
T  32741267 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagcctcgatgtggac 32741330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 35210218 - 35210267
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  35210218 atatgtctcacatcggata-aaatagtaaaggttgaacaccttataagtaa 35210267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 1846763 - 1846811
Alignment:
Q  19 tatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  1846763 tatgtctcacatcggata-aaatagtaaaggttgaacaccttataagtaa 1846811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 10073758 - 10073711
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||| |   |||||||||||| ||||||||||||||||    
T  10073758 atatgtcccacatcggaga---aaagtaaaggttgaacaccttataagtaa 10073711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 45434650 - 45434699
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  45434650 atatgtcccacatcggata-aaaaagtaaaggttgaacaccttataagtaa 45434699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 1085686 - 1085623
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||||||||| |||||| ||||||||  |||||||||||||| ||||||||    
T  1085686 aaggttttgggtaagagtgtggcgtctctcttacttgtgtg--gttgttctagcctcgatgtggac 1085623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 7517594 - 7517643
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  7517594 atatgtcccacatcggata-aaagagtaaaggttgaacaccttataagtaa 7517643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 7554039 - 7554088
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  7554039 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 7554088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 22566806 - 22566757
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  22566806 atatgtcccacatcggata-aaagagtaaaggttgaacaccttataagtaa 22566757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 30255353 - 30255402
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  30255353 atatgtcccacatcggata-aaagagtaaaggttgaacaccttataagtaa 30255402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 40094844 - 40094783
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgg 131  Q
    |||||||| ||| |||||||||||| |||||||||  |||| ||||||||||||||| ||||||    
T  40094844 aaggttttgggtaagagtgtggcgtctctcttgct--tgtgaggttgttctagcctcgatgtgg 40094783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 43241509 - 43241559
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaaa 69  Q
    |||||| |||||||||||| ||||| |||||||| |||||||||||||||||    
T  43241509 atatgttccacatcggataaaaaaa-taaaggttgaacaccttataagtaaa 43241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 118445 - 118396
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| ||||||||| ||||||||| ||||||| ||||||||    
T  118445 atatgtcccacatcagatagaaaa-gtaaaggttgaacacctaataagtaa 118396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 1085760 - 1085711
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||| ||||||||||    
T  1085760 atatgtcccacatcggata-aaatagtaaaggttgaacactttataagtaa 1085711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 8128585 - 8128536
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||| ||||    
T  8128585 atatgtcccatatcggatagaaaaa-taaaggttgaacaccttatatgtaa 8128536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 11845205 - 11845254
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  11845205 atatgttccacatcggata-aaatagtaaaggttgaacaccttataagtaa 11845254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 24177449 - 24177498
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||| | ||||||||||||||||    
T  24177449 atatgtcccacatcggata-aaagagtaaaggctgaacaccttataagtaa 24177498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 29157579 - 29157628
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||| |||||| ||| |||||||||| ||||||||||||||||    
T  29157579 atatgtcccacaccggata-aaatagtaaaggttgaacaccttataagtaa 29157628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 30244284 - 30244333
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| || |||||||||||||    
T  30244284 atatgtcccacatcggata-aaagagtaaaggttgaagaccttataagtaa 30244333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 30245091 - 30245140
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  30245091 atatgttccacatcggata-aaagagtaaaggttgaacaccttataagtaa 30245140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 30245508 - 30245557
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  30245508 atatgtcccacatcagata-aaagagtaaaggttgaacaccttataagtaa 30245557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 37533154 - 37533105
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  37533154 atatgtcccacattggata-aaatagtaaaggttgaacaccttataagtaa 37533105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 36622974 - 36623022
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagta 67  Q
    ||||||||||||||||||| ||| |||||||||||||||  |||||||||    
T  36622974 atatgtcccacatcggata-aaatagtaaaggttaaacattttataagta 36623022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 22567109 - 22567024
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccccaac 155  Q
    |||||||||||| ||||||||| || |||||||||  |||| ||||||||  ||||| |||||||  ||  |||||||||||| ||||    
T  22567109 aaggtttttggtaagagtgtggtgtctctcttgct--tgtggggttgttcgggcctcgatgtggatggtcccccgagctcccctcaac 22567024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 30032655 - 30032736
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||| ||| |||||||| | | ||||||||||||| |  ||||||||| |||| |||||||| ||  |||||||||||||    
T  30032655 aaggttttgggtaagagtgtgacatctctcttgcttgtgcg--gttgttctatcctcgatgtggacggtcccccgagctccccc 30032736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 34218178 - 34218131
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagt 66  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||||||||||    
T  34218178 atatgtctcacatcggata-aaaaagtaaatgttgaacaccttataagt 34218131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 1634459 - 1634409
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  1634459 atatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaa 1634409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 29645046 - 29644997
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  29645046 atatgtcccacatcggata-aaagagtaaaggttaaacaccttataagtaa 29644997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 12114706 - 12114657
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  12114706 atatatcccacatcggatagaaaa-gtaaaggttgaacaccttataagtaa 12114657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 21832487 - 21832438
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  21832487 atatgtcccacattggatagaaaa-gtaaaggttgaacaccttataagtaa 21832438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 35946536 - 35946585
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  35946536 atatgtcccacatcggata-aaacagtaaaggttgaacaccttataagtaa 35946585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 41359561 - 41359498
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||||||||| ||| ||||||||| |  |||||||||||||||||||||||    
T  41359561 aaggttttgggtaagagtgtggcgtctcttttgcttgtgcg--gttgttctagcctcaatgtggac 41359498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 42342160 - 42342097
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||||||||| |||||||||  |||| ||||||||||||||| ||||||||    
T  42342160 aaggttttgggtaagagtgtggcgtctctcttgct--tgtgcggttgttctagcctcgatgtggac 42342097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 42342458 - 42342395
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||||| ||| ||||||||||||| |  |||||||||||||||||||||||    
T  42342458 aaggttttgggtaagagtgtgacgtctctcttgcttgtgcg--gttgttctagcctcaatgtggac 42342395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 31190031 - 31190078
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagt 66  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  31190031 atatgtcccacatcggata-aaagagtaaaggttgaacaccttataagt 31190078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 37990709 - 37990632
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctc 147  Q
    |||||||| ||| ||||||||| || |||||||||||  |||| ||||||||||||| |||||||| ||  |||||||||    
T  37990709 aaggttttgggtaagagtgtggtgtctctcttgcttg--tgtgattgttctagcctcgatgtggacggtcccccgagctc 37990632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 3135217 - 3135167
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaaa 69  Q
    ||||||||||||||||||| ||| |||||| ||| |||||||||||||||||    
T  3135217 atatgtcccacatcggata-aaatagtaaatgttgaacaccttataagtaaa 3135167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 11661549 - 11661598
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| ||||| ||||||||| |||||||||||    
T  11661549 atatgtcccacatcggata-aaatagtaacggttaaacatcttataagtaa 11661598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 22304583 - 22304632
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| || |||||||||||||    
T  22304583 atatgtcccacatcggata-aaatagtaaaggttgaataccttataagtaa 22304632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 29644725 - 29644676
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||  ||| |||||||||| ||||||||||||||||    
T  29644725 atatgtcccacatcggatt-aaagagtaaaggttgaacaccttataagtaa 29644676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 33175808 - 33175759
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| |||||| ||||||||| ||||||||| ||||||||||||||||    
T  33175808 atatgtctcacatcagatagaaaa-gtaaaggttgaacaccttataagtaa 33175759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 33803396 - 33803347
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| |||||| |||||||||    
T  33803396 atatgtcccacatcggata-aaatagtaaaggttgaacaccatataagtaa 33803347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 37991047 - 37990984
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||| ||||  |||||||||||||| ||||||||    
T  37991047 aaggttttgggtaagagtgtggtgtctctcttgcttatgtg--gttgttctagcctcgatgtggac 37990984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 39935099 - 39935050
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||| |||||||||| ||| |||||||||| ||||||||||||||||    
T  39935099 atatgtcctacatcggata-aaagagtaaaggttgaacaccttataagtaa 39935050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 42342532 - 42342483
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  42342532 atatgtcccacatccgata-aaagagtaaaggttcaacaccttataagtaa 42342483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 42584966 - 42584917
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||||||| || ||||||| || ||||||||||||||||    
T  42584966 atatgtcccacatcggatag-aagagtaaagattgaacaccttataagtaa 42584917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 43346861 - 43346798
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| ||||||||| || |||||||||  |||| ||||||||||||||| ||||||||    
T  43346861 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagcctctatgtggac 43346798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 43346935 - 43346886
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  43346935 atatgtcccacatcagata-aaatagtaaaggttgaacaccttataagtaa 43346886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 45901727 - 45901777
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| || ||  ||||||| ||||||||||||||||    
T  45901727 atatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaa 45901777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 50612596 - 50612547
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| ||||||| || ||||||||||||||||    
T  50612596 atatgtcccacatcggata-aaatagtaaagattgaacaccttataagtaa 50612547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 52634690 - 52634739
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||| ||||||||||||    
T  52634690 atatgtcccacatcggata-aaacagtaaaggttgaacgccttataagtaa 52634739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 54017960 - 54017911
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||| |||||||||| ||| |||||||||| ||||||||||||||||    
T  54017960 atatgtcctacatcggata-aaagagtaaaggttgaacaccttataagtaa 54017911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 22304657 - 22304723
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagt 136  Q
    |||||||| ||| ||||||||| || |||||||||  |||| ||||||||||| ||| |||||||||||    
T  22304657 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgcggttgttctagtctcgatgtggacagt 22304723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 41359835 - 41359774
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgg 131  Q
    |||||||| ||| ||| |||||||| ||||| |||||||||  |||||||||||||| ||||||    
T  41359835 aaggttttgggtaagaatgtggcgtctctctcgcttgtgtg--gttgttctagcctcgatgtgg 41359774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 49336829 - 49336782
Alignment:
Q  20 atgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||| |||||||||||||||| ||||||||| | ||||||||||||||    
T  49336829 atgtctcacatcggatagaaaa-gtaaaggttgaccaccttataagtaa 49336782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 54018268 - 54018207
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgg 131  Q
    |||||||| ||| ||||||||| || |||| ||||||||||  |||||||||||||| ||||||    
T  54018268 aaggttttgggtaagagtgtggtgtctctcatgcttgtgtg--gttgttctagcctcgatgtgg 54018207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 41142460 - 41142542
Alignment:
Q  68 aaggtttttggtta-gagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||||||| | ||||||||||| |||||||||||||  |||||||||||||||| |||||||| ||  |||||| ||||||    
T  41142460 aaggtttttggtaaagagtgtggcgtctctcttgcttgtg--tggttgttctagcctcgatgtggacggtcccccgagttccccc 41142542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 32168767 - 32168702
Alignment:
Q  69 aggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagt 136  Q
    ||||||| ||| |||||||||||| |||||||||  |||| ||||||||||||||| |||||||||||    
T  32168767 aggttttgggtaagagtgtggcgtctctcttgct--tgtgcggttgttctagcctcgatgtggacagt 32168702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 41142386 - 41142436
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaaa 69  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  41142386 atatgtcccacatcggata-aaacagtaaaggttgaacaccttataagtaaa 41142436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 3537291 - 3537242
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  3537291 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 3537242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 3537669 - 3537606
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||||||||| |||||||||  |||| ||||||||||||||| ||||||||    
T  3537669 aaggttttgggtaagagtgtggcgtctctcttgct--tgtgcggttgttctagcctcgatgtggac 3537606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 9955921 - 9955971
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| |||||||||||||| ||||| ||||||||||    
T  9955921 atatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaa 9955971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 22077639 - 22077590
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  22077639 atatgtctcacatcggatagaaaa-gtaaaggttgaacaccttataagtaa 22077590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 37556125 - 37556175
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| |||| |||||||||||    
T  37556125 atatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaa 37556175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 44290969 - 44290920
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  44290969 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 44290920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 44290881 - 44290811
Alignment:
Q  81 agagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccccca 153  Q
    ||||||||| || ||||||||||||| |  |||||||||||||| |||||||| ||  |||||||||||||||    
T  44290881 agagtgtggtgtatctcttgcttgtgcg--gttgttctagcctcgatgtggacggtcccccgagctcccccca 44290811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 34649452 - 34649499
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagt 66  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  34649452 atatgtcccacatcggata-aaagagtaaaggttgaacaccttataagt 34649499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 66616 - 66567
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||| ||| ||||||||||||| ||||||||| ||||||||||||||||    
T  66616 atatgttccatatcggatagaaaa-gtaaaggttgaacaccttataagtaa 66567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 3537743 - 3537694
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||| |||||    
T  3537743 atatgtcccacatcggata-aaatagtaaaggttgaacaccttatgagtaa 3537694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 3550734 - 3550783
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||| |||| ||| |||||||||| ||||||||||||||||    
T  3550734 atatgtcccacatcagata-aaatagtaaaggttgaacaccttataagtaa 3550783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 3875475 - 3875426
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| ||||||||||| ||||||||||||||  |||||||||||||||    
T  3875475 atatgtcacacatcggata-aaaaagtaaaggttgtacaccttataagtaa 3875426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 5575118 - 5575167
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||| |||||||||| | ||||||||| ||||||||||||||||    
T  5575118 atatgtcccacgtcggatagaaga-gtaaaggttgaacaccttataagtaa 5575167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 17294591 - 17294640
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||| ||||||||||    
T  17294591 atatgtcccacatcggata-aaagagtaaaggttgaacactttataagtaa 17294640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 24132129 - 24132084
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataa 64  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  24132129 atatgtccctcatcggatagaaaa-gtaaaggttgaacaccttataa 24132084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 31767305 - 31767256
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||| |||||||||||| ||| |||||||||| ||||||||||||||||    
T  31767305 atatgttccacatcggata-aaacagtaaaggttgaacaccttataagtaa 31767256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 34364521 - 34364570
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  34364521 atatgtctcacatcggata-aaatagtaaaggttgaacaccttataagtaa 34364570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 34649526 - 34649589
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||| ||| |||||| ||||| ||||||||| ||||  ||||||||||||||| ||||||||    
T  34649526 aaggttttgggtaagagtgaggcgtctctcttgctagtgt--ggttgttctagcctcgatgtggac 34649589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 40082421 - 40082470
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||| |||||||||| ||| |||||||||| ||||||||||||||||    
T  40082421 atatgtcctacatcggata-aaatagtaaaggttgaacaccttataagtaa 40082470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 40082494 - 40082577
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggacagtttcccgagctcccccca 153  Q
    |||||||| ||| |||||||||  | ||||||||||||| ||  ||||||||||||| ||||||| |||   ||||||||||||||    
T  40082494 aaggttttgggtaagagtgtggtatctctcttgcttgtgcgt--ttgttctagcctcgatgtggatagtcctccgagctcccccca 40082577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 44290602 - 44290553
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| |||| |||||||||||    
T  44290602 atatgtcccacatcggata-aaatagtaaaggttgaacatcttataagtaa 44290553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 45084396 - 45084445
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  45084396 atatctcccacatcggata-aaacagtaaaggttgaacaccttataagtaa 45084445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 50052167 - 50052118
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| |||| |||||||||||    
T  50052167 atatgtcccacatcggata-aaatagtaaaggttgaacatcttataagtaa 50052118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 21378116 - 21378066
Alignment:
Q  81 agagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtggac 133  Q
    |||||||||||| | | |||||||||||  |||||||||||||||||||||||    
T  21378116 agagtgtggcgtctatattgcttgtgtg--gttgttctagcctcaatgtggac 21378066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 48588631 - 48588583
Alignment:
Q  19 tatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| |||||||||| ||| |||||||||| ||||||||||||||||    
T  48588631 tatgtccgacatcggata-aaatagtaaaggttgaacaccttataagtaa 48588583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 5320109 - 5320062
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagt 66  Q
    |||||| ||||||||||||||||| ||||| ||| ||||||||||||||    
T  5320109 atatgttccacatcggatagaaaa-gtaaaagttgaacaccttataagt 5320062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 26661666 - 26661619
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagt 66  Q
    |||||||||||||||| || ||| |||||||||| ||||||||||||||    
T  26661666 atatgtcccacatcgggta-aaagagtaaaggttgaacaccttataagt 26661619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 37555817 - 37555878
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgg 131  Q
    |||||||| ||| ||||||||| || |||||||||  ||||||||||||| |||||| ||||||    
T  37555817 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgtggttgttcaagcctcgatgtgg 37555878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 37556199 - 37556260
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgg 131  Q
    |||||||| ||| ||||||||| || |||||||||  ||||||||||||| |||||| ||||||    
T  37556199 aaggttttgggtaagagtgtggtgtctctcttgct--tgtgtggttgttcaagcctcgatgtgg 37556260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 41157079 - 41157140
Alignment:
Q  68 aaggtttttggttagagtgtggcgtttctcttgcttgtgtgtggttgttctagcctcaatgtgg 131  Q
    |||||||| ||| ||||||||| || ||| |||||||||  |||||||||||||||| ||||||    
T  41157079 aaggttttgggtaagagtgtggtgtctctattgcttgtg--tggttgttctagcctcgatgtgg 41157140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 286 - 237
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  286 atatgtcccacatcggata-aaatagtaaaggttgaacaccttataagtaa 237  T

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Target: scaffold0702; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 658 - 609
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||||||||||| || ||| |||||||||| ||||||||||||||||    
T  658 atatgtcccacatcggtta-aaagagtaaaggttgaacaccttataagtaa 609  T

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Target: scaffold0734 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 5410 - 5459
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||||| |||||||||| ||| |||||||||| ||||||||||||||||    
T  5410 atatgtcctacatcggata-aaatagtaaaggttgaacaccttataagtaa 5459  T

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Target: scaffold0734; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 5791 - 5840
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    ||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  5791 atatgtcgcacatcggata-aaatagtaaaggttgaacaccttataagtaa 5840  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 5371 - 5420
Alignment:
Q  18 atatgtcccacatcggatagaaaaagtaaaggttaaacaccttataagtaa 68  Q
    |||||| ||||||||||||||| | ||||||||| ||||||||||||||||    
T  5371 atatgttccacatcggatagaaca-gtaaaggttgaacaccttataagtaa 5420  T

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Target: scaffold0391 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 1139 - 1095
Alignment:
Q  107 tgtggttgttctagcctcaatgtggacagtttcccgagctccccc 151  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||||    
T  1139 tgtggttgttctagcctcgatgtggacggttccccaagctccccc 1095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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