View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3939_low_7 (Length: 324)

Name: NF3939_low_7
Description: NF3939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3939_low_7
NF3939_low_7
[»] chr1 (26 HSPs)
chr1 (143-306)||(32125797-32125960)
chr1 (24-144)||(9521938-9522058)
chr1 (24-144)||(9526679-9526798)
chr1 (24-142)||(2232807-2232926)
chr1 (24-143)||(2393132-2393253)
chr1 (26-144)||(21353195-21353318)
chr1 (24-144)||(2401072-2401194)
chr1 (24-136)||(4144543-4144660)
chr1 (39-143)||(25134295-25134400)
chr1 (90-147)||(25860247-25860306)
chr1 (65-144)||(9314497-9314574)
chr1 (62-144)||(3090958-3091039)
chr1 (90-142)||(13215465-13215518)
chr1 (90-144)||(28206910-28206965)
chr1 (90-144)||(50078633-50078689)
chr1 (90-144)||(16226555-16226609)
chr1 (93-142)||(13762225-13762275)
chr1 (90-142)||(2510184-2510237)
chr1 (90-142)||(9459277-9459329)
chr1 (90-142)||(9463104-9463156)
chr1 (90-142)||(16231950-16232002)
chr1 (90-144)||(16429334-16429389)
chr1 (90-142)||(23786226-23786278)
chr1 (90-144)||(41647302-41647357)
chr1 (85-144)||(13785105-13785164)
chr1 (90-142)||(27336782-27336837)
[»] chr7 (36 HSPs)
chr7 (24-144)||(7070008-7070128)
chr7 (24-142)||(7075009-7075127)
chr7 (24-144)||(25405627-25405747)
chr7 (24-144)||(25351561-25351685)
chr7 (24-142)||(8378357-8378473)
chr7 (24-142)||(3319869-3319988)
chr7 (24-142)||(44143722-44143843)
chr7 (38-143)||(7464364-7464470)
chr7 (39-142)||(30247198-30247303)
chr7 (24-144)||(3324635-3324756)
chr7 (24-143)||(15540843-15540963)
chr7 (39-140)||(34546734-34546835)
chr7 (25-143)||(2075320-2075437)
chr7 (26-144)||(25357257-25357380)
chr7 (24-144)||(44016512-44016637)
chr7 (24-142)||(2121108-2121229)
chr7 (26-140)||(25410344-25410463)
chr7 (24-144)||(44010601-44010726)
chr7 (40-144)||(42006888-42006994)
chr7 (24-140)||(21369848-21369970)
chr7 (84-143)||(44512362-44512423)
chr7 (90-144)||(24748981-24749037)
chr7 (90-143)||(443989-444045)
chr7 (93-144)||(7349115-7349167)
chr7 (93-144)||(7351489-7351541)
chr7 (84-142)||(6067048-6067107)
chr7 (90-144)||(20297758-20297812)
chr7 (90-142)||(31434892-31434946)
chr7 (90-144)||(38394382-38394436)
chr7 (90-143)||(18345937-18345990)
chr7 (24-80)||(44512439-44512499)
chr7 (62-143)||(45366834-45366912)
chr7 (90-142)||(1606775-1606827)
chr7 (90-144)||(13099315-13099370)
chr7 (90-142)||(25542924-25542976)
chr7 (94-147)||(37411960-37412016)
[»] chr8 (35 HSPs)
chr8 (24-146)||(28895715-28895836)
chr8 (24-144)||(28890978-28891097)
chr8 (24-139)||(4812336-4812451)
chr8 (24-142)||(23179410-23179531)
chr8 (24-142)||(25684853-25684972)
chr8 (24-144)||(16757108-16757229)
chr8 (24-142)||(16752374-16752493)
chr8 (24-144)||(28328120-28328241)
chr8 (24-142)||(28332843-28332962)
chr8 (24-145)||(9020954-9021079)
chr8 (44-149)||(29554698-29554803)
chr8 (24-142)||(3276504-3276626)
chr8 (24-142)||(591005-591126)
chr8 (24-143)||(17799277-17799400)
chr8 (71-144)||(4823549-4823622)
chr8 (45-124)||(21034100-21034181)
chr8 (24-142)||(26268084-26268207)
chr8 (24-142)||(30423420-30423541)
chr8 (24-130)||(33032860-33032971)
chr8 (88-140)||(28228790-28228842)
chr8 (39-143)||(2266935-2267039)
chr8 (90-143)||(3874435-3874488)
chr8 (90-142)||(28251410-28251463)
chr8 (90-142)||(183257-183310)
chr8 (65-139)||(15949788-15949859)
chr8 (90-144)||(14419033-14419088)
chr8 (60-144)||(15944909-15944989)
chr8 (90-142)||(24873039-24873091)
chr8 (93-143)||(25952960-25953011)
chr8 (89-143)||(7493300-7493353)
chr8 (84-153)||(11700804-11700875)
chr8 (90-143)||(14477687-14477741)
chr8 (90-143)||(27911514-27911568)
chr8 (90-143)||(27957933-27957987)
chr8 (90-135)||(36865976-36866023)
[»] scaffold0006 (1 HSPs)
scaffold0006 (24-142)||(231328-231445)
[»] chr2 (31 HSPs)
chr2 (24-144)||(2736417-2736538)
chr2 (39-142)||(27517491-27517594)
chr2 (24-142)||(33670817-33670936)
chr2 (24-144)||(39680257-39680379)
chr2 (24-144)||(22717081-22717204)
chr2 (24-142)||(39687201-39687321)
chr2 (24-142)||(22712374-22712495)
chr2 (24-144)||(45679935-45680056)
chr2 (24-130)||(2741153-2741260)
chr2 (38-149)||(38191241-38191352)
chr2 (39-140)||(12781075-12781177)
chr2 (26-142)||(17943747-17943867)
chr2 (24-143)||(17462650-17462768)
chr2 (24-144)||(20054608-20054735)
chr2 (24-150)||(37170599-37170729)
chr2 (24-142)||(20049866-20049991)
chr2 (24-140)||(30479203-30479322)
chr2 (89-142)||(7462789-7462844)
chr2 (90-143)||(22287180-22287234)
chr2 (90-143)||(42923292-42923346)
chr2 (90-143)||(42923350-42923404)
chr2 (90-142)||(17849474-17849528)
chr2 (90-142)||(19007997-19008051)
chr2 (93-145)||(22707592-22707646)
chr2 (90-144)||(36560979-36561033)
chr2 (90-144)||(6263991-6264046)
chr2 (90-144)||(21520532-21520587)
chr2 (107-144)||(28458691-28458728)
chr2 (90-142)||(36558721-36558773)
chr2 (90-144)||(19504176-19504229)
chr2 (90-144)||(42453839-42453892)
[»] chr3 (49 HSPs)
chr3 (24-144)||(6303524-6303644)
chr3 (24-144)||(10099922-10100042)
chr3 (24-142)||(10093923-10094041)
chr3 (24-142)||(10200805-10200923)
chr3 (24-142)||(54193439-54193557)
chr3 (24-144)||(10897214-10897338)
chr3 (25-142)||(27544504-27544619)
chr3 (24-144)||(22625827-22625947)
chr3 (24-143)||(11079724-11079846)
chr3 (24-142)||(5858753-5858874)
chr3 (24-144)||(54188723-54188843)
chr3 (40-143)||(29897526-29897631)
chr3 (26-144)||(29913803-29913925)
chr3 (24-147)||(20031165-20031293)
chr3 (24-142)||(10594883-10595006)
chr3 (24-144)||(47882736-47882859)
chr3 (24-147)||(10949110-10949236)
chr3 (24-136)||(47878033-47878147)
chr3 (24-142)||(3330098-3330221)
chr3 (45-144)||(10612625-10612725)
chr3 (24-144)||(27761838-27761962)
chr3 (38-142)||(4535841-4535946)
chr3 (24-142)||(48390152-48390276)
chr3 (24-110)||(16462406-16462495)
chr3 (50-142)||(38003103-38003195)
chr3 (60-130)||(7418306-7418378)
chr3 (24-141)||(13893668-13893789)
chr3 (84-144)||(27420998-27421057)
chr3 (84-142)||(16997150-16997209)
chr3 (90-144)||(36871147-36871202)
chr3 (90-146)||(28412866-28412922)
chr3 (83-143)||(14634290-14634350)
chr3 (90-135)||(53468302-53468349)
chr3 (90-144)||(10621364-10621418)
chr3 (90-142)||(24980073-24980126)
chr3 (90-142)||(51674608-51674662)
chr3 (90-143)||(25389273-25389327)
chr3 (90-143)||(31151702-31151755)
chr3 (90-145)||(458651-458705)
chr3 (90-142)||(747125-747177)
chr3 (84-140)||(1620313-1620370)
chr3 (90-144)||(3315047-3315102)
chr3 (90-144)||(32219449-32219505)
chr3 (90-142)||(38210737-38210789)
chr3 (90-142)||(50494365-50494417)
chr3 (90-144)||(456274-456327)
chr3 (90-144)||(10958161-10958214)
chr3 (90-135)||(27635504-27635551)
chr3 (97-142)||(39715836-39715883)
[»] scaffold0131 (2 HSPs)
scaffold0131 (24-142)||(17706-17824)
scaffold0131 (90-148)||(14225-14282)
[»] chr6 (39 HSPs)
chr6 (24-142)||(31248544-31248662)
chr6 (24-142)||(3577338-3577460)
chr6 (24-144)||(25941878-25942002)
chr6 (24-142)||(13883687-13883806)
chr6 (24-144)||(13878951-13879072)
chr6 (24-142)||(30987356-30987473)
chr6 (38-142)||(25465754-25465859)
chr6 (39-143)||(16786161-16786265)
chr6 (45-144)||(17694699-17694799)
chr6 (24-143)||(35201156-35201274)
chr6 (24-144)||(22351702-22351826)
chr6 (24-143)||(26887076-26887195)
chr6 (24-143)||(22342651-22342774)
chr6 (40-143)||(33216055-33216160)
chr6 (24-125)||(17038449-17038550)
chr6 (40-130)||(12166010-12166102)
chr6 (24-142)||(13467318-13467441)
chr6 (24-143)||(19701756-19701879)
chr6 (40-124)||(26643399-26643483)
chr6 (40-124)||(26749365-26749449)
chr6 (65-144)||(5165691-5165772)
chr6 (90-146)||(10584359-10584417)
chr6 (24-140)||(17066057-17066179)
chr6 (90-147)||(26065403-26065462)
chr6 (90-147)||(26085372-26085431)
chr6 (65-98)||(5165772-5165805)
chr6 (90-142)||(5273055-5273108)
chr6 (89-142)||(3629711-3629765)
chr6 (90-144)||(8717193-8717247)
chr6 (85-140)||(24501303-24501357)
chr6 (90-144)||(26068233-26068287)
chr6 (90-143)||(11982871-11982924)
chr6 (89-142)||(28037576-28037631)
chr6 (84-142)||(7294201-7294260)
chr6 (90-142)||(12195354-12195406)
chr6 (90-142)||(26065961-26066013)
chr6 (90-142)||(29754549-29754601)
chr6 (84-141)||(3918783-3918841)
chr6 (90-144)||(33309278-33309331)
[»] chr4 (39 HSPs)
chr4 (24-142)||(15831360-15831478)
chr4 (24-144)||(15312526-15312651)
chr4 (24-144)||(11853778-11853899)
chr4 (24-143)||(18587176-18587299)
chr4 (24-143)||(55822472-55822592)
chr4 (24-142)||(16489558-16489681)
chr4 (24-143)||(16688793-16688916)
chr4 (24-143)||(7050124-7050246)
chr4 (24-142)||(4555915-4556036)
chr4 (42-144)||(4570320-4570422)
chr4 (24-143)||(8529477-8529601)
chr4 (24-144)||(4558516-4558641)
chr4 (24-142)||(15317167-15317290)
chr4 (41-143)||(4885100-4885203)
chr4 (24-143)||(47566698-47566822)
chr4 (24-142)||(36771602-36771725)
chr4 (40-137)||(36769704-36769803)
chr4 (88-147)||(31300677-31300737)
chr4 (67-142)||(4874336-4874410)
chr4 (24-145)||(16639032-16639157)
chr4 (24-73)||(31300629-31300681)
chr4 (88-142)||(32273806-32273860)
chr4 (84-144)||(16185684-16185746)
chr4 (39-142)||(25613810-25613915)
chr4 (90-142)||(47563194-47563248)
chr4 (90-144)||(18311213-18311269)
chr4 (90-144)||(18409190-18409246)
chr4 (90-142)||(18709003-18709056)
chr4 (90-142)||(40637513-40637566)
chr4 (84-146)||(47078702-47078766)
chr4 (93-140)||(25358073-25358122)
chr4 (90-143)||(51015685-51015739)
chr4 (84-114)||(54906996-54907026)
chr4 (90-144)||(16453743-16453798)
chr4 (90-144)||(22802575-22802630)
chr4 (89-142)||(2891726-2891780)
chr4 (90-142)||(3824447-3824502)
chr4 (94-143)||(5101355-5101405)
chr4 (90-145)||(16931628-16931683)
[»] scaffold1050 (1 HSPs)
scaffold1050 (24-143)||(2918-3037)
[»] chr5 (25 HSPs)
chr5 (24-142)||(2297849-2297965)
chr5 (24-142)||(22673042-22673163)
chr5 (24-143)||(42238466-42238589)
chr5 (24-142)||(1171024-1171142)
chr5 (40-149)||(35385296-35385406)
chr5 (24-140)||(28786607-28786728)
chr5 (45-142)||(1240662-1240760)
chr5 (24-120)||(25452705-25452802)
chr5 (40-146)||(40222993-40223101)
chr5 (24-120)||(25445706-25445803)
chr5 (24-142)||(20437126-20437249)
chr5 (24-142)||(11962287-11962409)
chr5 (39-136)||(17841110-17841207)
chr5 (24-142)||(16093144-16093268)
chr5 (60-144)||(10627611-10627697)
chr5 (39-144)||(31782309-31782413)
chr5 (90-143)||(37705625-37705680)
chr5 (90-138)||(17818338-17818388)
chr5 (24-124)||(26406340-26406442)
chr5 (90-142)||(10528937-10528990)
chr5 (83-124)||(34033438-34033479)
chr5 (90-144)||(26098127-26098184)
chr5 (90-142)||(3372977-3373029)
chr5 (90-144)||(6745454-6745509)
chr5 (90-144)||(20505685-20505740)
[»] scaffold0256 (1 HSPs)
scaffold0256 (24-144)||(16540-16658)
[»] scaffold0209 (1 HSPs)
scaffold0209 (63-144)||(16883-16965)
[»] scaffold0267 (1 HSPs)
scaffold0267 (90-142)||(421-473)
[»] scaffold0472 (1 HSPs)
scaffold0472 (90-143)||(6594-6647)
[»] scaffold0004 (1 HSPs)
scaffold0004 (90-144)||(80252-80307)


Alignment Details
Target: chr1 (Bit Score: 156; Significance: 7e-83; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 32125797 - 32125960
Alignment:
Q  143 atattcatactgacataaaaattcagcttttgactaaggggaagagtaatgtttagtgatgtagagtaagttgatgtttattagattatttgttttcaac 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32125797 atattcatactgacataaaaattcagcttttgactaaggggaagagtaatgtttagtgatgtagagtaagttgatgttcattagattatttgttttcaac 32125896  T
Q  243 gattaaagaatttcatatatattacacaatggttttatatcaacccacatttggtgtttgttct 306  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32125897 gattacagaatttcatatatattacacaatggttttatatcaacccacatttggtgtttgttct 32125960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 9521938 - 9522058
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  9521938 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 9522036  T
Q  123 ttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||    
T  9522037 ttctcaacgaattcacaacaat 9522058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 9526679 - 9526798
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtg-gtt 122  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||    
T  9526679 tttatctcttgctgtttt--gtttggattatttgctacccgcttgatttgattacttgttattaatttgctccacacatcaagttttattggtgtgattt 9526776  T
Q  123 ttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||    
T  9526777 ttctcaacgaattcacaacaat 9526798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 2232807 - 2232926
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  2232807 tttatctcttgttgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtttttattggtgtggtt 2232905  T
Q  122 tttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||    
T  2232906 tttctcaacgaattcacaaca 2232926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 2393253 - 2393132
Alignment:
Q  24 tttatctcttgctgttt--tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggt 121  Q
    |||||||||||||||||  ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  2393253 tttatctcttgctgtttactttgtttggattaattgctatccacttgatttgattacttggtattaatttgctccacgcataaagttttattggtgtggt 2393154  T
Q  122 tttctcaacgaattcacaacaa 143  Q
    |||| |||||||||||||||||    
T  2393153 tttcacaacgaattcacaacaa 2393132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 21353318 - 21353195
Alignment:
Q  26 tatctcttgctgtttt---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtgg 120  Q
    ||||||||||||||||   |||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||||||  ||||||||||||    
T  21353318 tatctcttgctgttttattttgtttggattatttgctacccacttgatttaattacttagtattaatttgctccacgcatcaagtttgttattggtgtgg 21353219  T
Q  121 ttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||| ||||||    
T  21353218 ttttctcaacgaattcataacaat 21353195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 2401194 - 2401072
Alignment:
Q  24 tttatctcttgctgttt--tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggt 121  Q
    ||||||||||| |||||  ||||||||||||| ||| || || ||||||||||||||||||||||||||||||| || |||||||||||||| ||||| |    
T  2401194 tttatctcttgttgtttactttgtttggattaattgttatccacttgatttgattacttggtattaatttgctctacgcatcaagttttatttgtgtgat 2401095  T
Q  122 tttctcaacgaattcacaacaat 144  Q
    |||| ||||||||||||||||||    
T  2401094 tttcacaacgaattcacaacaat 2401072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 4144660 - 4144543
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgt 118  Q
    |||||||||||||||||   |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||  | ||||||||||    
T  4144660 tttatctcttgctgtttacttttgtttgaattatttgctatccgcttgatttgattacttggtattaatttgctccacgtatcaagattattattggtgt 4144561  T
Q  119 ggttttctcaacgaattc 136  Q
    ||||||| ||||||||||    
T  4144560 ggttttcacaacgaattc 4144543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 25134295 - 25134400
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatc-aagttttattggtgtggttttctcaacgaattca 137  Q
    |||||||||| ||||||| |||||||||||||||||||| ||| ||||||||| || ||| |||| || ||||||||||||||||||| |||||||||||    
T  25134295 tttttgtttgaattatttactacccgcttgatttgattatttgatattaatttacttcacgcatcaaatttttattggtgtggttttcacaacgaattca 25134394  T
Q  138 caacaa 143  Q
    ||||||    
T  25134395 caacaa 25134400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 25860306 - 25860247
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaatatt 147  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||    
T  25860306 ttgctccacacatcaagtttgatattggtgtggttttcacaacgaattcacaacaatatt 25860247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 9314574 - 9314497
Alignment:
Q  65 cttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||| || |  ||||||||||||||||||||||||||||||||  |||  ||| |||| |||||||||    
T  9314574 cttgatttgattactttgttt--atttgctccacacatcaagttttattggtgtgacttttgcaatgaatccacaacaat 9314497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 3091039 - 3090958
Alignment:
Q  62 ccgcttgatttgattacttggtattaatttgctccacacatcaagtttt-attggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||| |||||| ||| |||||||||||||| || |||| ||||||||| ||||  ||||||||||||||||||    
T  3091039 ccgcttgatttgatttcttggtttta-tttgctccacacatgaaatttttattggtgtgtttttg-caacgaattcacaacaat 3090958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 13215465 - 13215518
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  13215465 ttgctccacacatcaagtttattattggtgtg-ttttctcaacgaattcacaaca 13215518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 28206965 - 28206910
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||    
T  28206965 ttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaacaat 28206910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 50078689 - 50078633
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||  |||||||||| |||||||| ||||||| |||||||    
T  50078689 ttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaacaat 50078633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 16226555 - 16226609
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  16226555 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacaat 16226609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 13762225 - 13762275
Alignment:
Q  93 ctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||||||||| ||||||||||| |||||||| ||||||| |||||    
T  13762225 ctccacacatcaagttgttattggtgtgattttctcatcgaattcgcaaca 13762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 2510237 - 2510184
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||| |||| |||||||| ||||||||||| ||||| ||||||||||||||||    
T  2510237 ttgcttcacatatcaagttgttattggtgtgattttcacaacgaattcacaaca 2510184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 9459329 - 9459277
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  9459329 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 9459277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 9463156 - 9463104
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  9463156 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 9463104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 16231950 - 16232002
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  16231950 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 16232002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 16429334 - 16429389
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||  ||||||||||| |||| ||| |||||||||||||||    
T  16429334 ttgctccacacatcaagtttgttattggtgtgatttt-tcatcgaattcacaacaat 16429389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 23786226 - 23786278
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  23786226 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 41647302 - 41647357
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||| ||||||||||||  |||||||||| |||||||| |||||||||||||||    
T  41647302 ttgctccgcacatcaagtttgttattggtgtg-ttttctcatcgaattcacaacaat 41647357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 13785164 - 13785105
Alignment:
Q  85 ttaatttgctccacacatcaag-ttttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||| ||||||||||| ||||||||||||| |||| | ||| |||||||||||||    
T  13785164 ttaatttgcttcacacatcaagtttttattggtgtgatttt-ttaacaaattcacaacaat 13785105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 27336837 - 27336782
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggtttt-ctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||  ||||| |||| |||| ||||||||||||||||||    
T  27336837 ttgctccacacatcaagtttgttattgatgtgatttttctcaacgaattcacaaca 27336782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 3e-57; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 7070008 - 7070128
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7070008 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttt 7070107  T
Q  124 tctcaacgaattcacaacaat 144  Q
    |||| ||||||||||||||||    
T  7070108 tctctacgaattcacaacaat 7070128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 7075009 - 7075127
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||    
T  7075009 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaattttctccacgcatcaagttttattggtgtgattt 7075108  T
Q  124 tctcaacgaattcacaaca 142  Q
    |||| ||||||||||||||    
T  7075109 tctctacgaattcacaaca 7075127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 25405627 - 25405747
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  25405627 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 25405725  T
Q  123 ttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||    
T  25405726 ttctcaacgaattcacaacaat 25405747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 25351561 - 25351685
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  25351561 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 25351660  T
Q  120 gttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||||    
T  25351661 gttttctcaacgaattcacaacaat 25351685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 8378473 - 8378357
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttt 123  Q
    ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  8378473 tttatctcttgctgtttt--gtttggattatttgctacccgcttaatttgattacttggtattaatttgctccacgcatcaagttttattggtctggttt 8378376  T
Q  124 tctcaacgaattcacaaca 142  Q
    |||||||||||||||||||    
T  8378375 tctcaacgaattcacaaca 8378357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 3319988 - 3319869
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  3319988 tttatctcttgctgttttt-gtttggattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 3319890  T
Q  122 tttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||    
T  3319889 tttctcaacgaattcacaaca 3319869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 44143843 - 44143722
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  44143843 tttatctcttgctgtttacttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagttttattggtgtgg 44143744  T
Q  121 ttttctcaacgaattcacaaca 142  Q
    ||||| |||||||||| |||||    
T  44143743 ttttcacaacgaattcgcaaca 44143722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 143
Target Start/End: Complemental strand, 7464470 - 7464364
Alignment:
Q  38 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggttttctcaacgaattc 136  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7464470 ttttttttttggattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 7464371  T
Q  137 acaacaa 143  Q
    |||||||    
T  7464370 acaacaa 7464364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 30247198 - 30247303
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgtggttttctcaacgaattc 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||||||||||||||||    
T  30247198 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccgcgcatcaagttttttattggtgtggttttctcaacgaattc 30247297  T
Q  137 acaaca 142  Q
    ||||||    
T  30247298 acaaca 30247303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 3324756 - 3324635
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    ||||||||||| ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  3324756 tttatctcttgttgttttt-gtttgcattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 3324658  T
Q  122 tttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||    
T  3324657 tttctcaacgaattcacaacaat 3324635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 15540963 - 15540843
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  15540963 tttatcgcttgctgttttt-gtttggattatttgctatccgcttgttttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 15540865  T
Q  122 tttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||||||    
T  15540864 tttctcaacgaattcacaacaa 15540843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 34546835 - 34546734
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcac 138  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||    
T  34546835 tttttgtttggattatttgctacccgcttaatttgattacttgatattaatttgttccacgcatcaagttttattggtgtggttttctcaacaaattcac 34546736  T
Q  139 aa 140  Q
    ||    
T  34546735 aa 34546734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 2075320 - 2075437
Alignment:
Q  25 ttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgtggtt 122  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||  |    
T  2075320 ttatctcttgctatttt-tgtttggattatttgctacccgcttgttttgattacttggtattaatttgctccacgcatcaagttttttattggtgtg--t 2075416  T
Q  123 ttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||||||    
T  2075417 ttctcaacgaattcacaacaa 2075437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 25357257 - 25357380
Alignment:
Q  26 tatctcttgctgtttt---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtgg 120  Q
    ||||||||||||||||   || ||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||    
T  25357257 tatctcttgctgttttattttcttttgattatttgctacccgcttgatttgattacttgatattattttgctccacacatcaagtttgttattggtgtgg 25357356  T
Q  121 ttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||| ||||||||    
T  25357357 ttttctcaacgaattgacaacaat 25357380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 44016637 - 44016512
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgt 118  Q
    ||||||||||| |||||   |||||||  ||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  44016637 tttatctcttgttgtttacttttgttttaattatttgctatccacttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgt 44016538  T
Q  119 ggttttctcaacgaattcacaacaat 144  Q
    ||||||| ||||||||||||||||||    
T  44016537 ggttttcacaacgaattcacaacaat 44016512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 2121108 - 2121229
Alignment:
Q  24 tttatctcttgctgtttt----ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttt-tattggtgt 118  Q
    ||||||||||||||||||    |||||||||||| |||||| || |||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  2121108 tttatctcttgctgttttacttttgtttggattaattgctatccacttgatttgattgcttggtattaatttgctccacacatcaagtttatattggtgt 2121207  T
Q  119 ggttttctcaacgaattcacaaca 142  Q
    |  |||||||||||||||||||||    
T  2121208 g--tttctcaacgaattcacaaca 2121229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 25410344 - 25410463
Alignment:
Q  26 tatctcttgctgtttt---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtgg 120  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||  ||||| |||||     
T  25410344 tatctcttgctgttttattttgtttggattatttgctacccgcttgatttgattacttgatattattttgctcaacacatcaagtttgttattagtgtga 25410443  T
Q  121 ttttctcaacgaattcacaa 140  Q
    |||||||||| |||||||||    
T  25410444 ttttctcaacaaattcacaa 25410463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 44010726 - 44010601
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgt 118  Q
    |||||||||||||||||   |||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||  |||||| ||  ||||||||||    
T  44010726 tttatctcttgctgtttacttttgtttgaattatttgctatccgcttgatttgattacttgatattaatttgctccatgcatcaaatttattattggtgt 44010627  T
Q  119 ggttttctcaacgaattcacaacaat 144  Q
     ||||||  |||||||||||||||||    
T  44010626 agttttcagaacgaattcacaacaat 44010601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 42006888 - 42006994
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattca 137  Q
    ||||||||| |||||||| ||| |||||||||||||||||| ||||||||||||| ||| |||||||||  ||||| || |||||||| | |||||||||    
T  42006888 ttttgtttgaattatttgatactcgcttgatttgattactttgtattaatttgcttcacgcatcaagtttattatttgtatggttttcactacgaattca 42006987  T
Q  138 caacaat 144  Q
    |||||||    
T  42006988 caacaat 42006994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 21369848 - 21369970
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgct-acccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtg 117  Q
    |||||||||||||||||   ||| |||| |||||||  | ||||||||||||||||||||| ||||||||||||||||| |||||| ||  ||||| |||    
T  21369848 tttatctcttgctgtttatttttatttgaattattttgtcacccgcttgatttgattacttagtattaatttgctccacgcatcaaatttattattagtg 21369947  T
Q  118 tggttttctcaacgaattcacaa 140  Q
    || ||||| || |||||||||||    
T  21369948 tgcttttcacaccgaattcacaa 21369970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 44512423 - 44512362
Alignment:
Q  84 attaatttgctccacacatcaagtttt--attggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||    
T  44512423 attaatttgctccacgcatcaagttttttattggtgtgtttttctcaacgaattcacaacaa 44512362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 24748981 - 24749037
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||    
T  24748981 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaacaat 24749037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 443989 - 444045
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtg-gttttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||||||||||||    
T  443989 ttgctccacacatcaagtttgttattggtgtgagttttctcatcgaattcacaacaa 444045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 7349167 - 7349115
Alignment:
Q  93 ctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  7349167 ctccacacatcaagttgttattggtgtgattttttcatcgaattcacaacaat 7349115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 7351541 - 7351489
Alignment:
Q  93 ctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  7351541 ctccacacatcaagttgttattggtgtgattttttcatcgaattcacaacaat 7351489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 6067107 - 6067048
Alignment:
Q  84 attaatttgctccacacatcaagt-tttattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||||| ||| |||||||| |||| ||| |||| ||||||||    
T  6067107 attaatttgctccacacatcaagtatttgttggtgtgattttttcaccgaaatcacaaca 6067048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 20297758 - 20297812
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  20297758 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacaat 20297812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 31434946 - 31434892
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||  |||||||||| |||||||| ||||||| |||||    
T  31434946 ttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgcaaca 31434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 38394382 - 38394436
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  38394382 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacaat 38394436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 18345937 - 18345990
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||| || |||||||| ||||| |||||||||||||||||    
T  18345937 ttgctccacacatcaagttgttgttggtgtg-ttttcacaacgaattcacaacaa 18345990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 44512499 - 44512439
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattactt 80  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||||| ||||||| |||    
T  44512499 tttatctcttgctgtttacttttgttttggattatttgctacccgcttgctttgattcctt 44512439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 45366834 - 45366912
Alignment:
Q  62 ccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||| ||| |||||| |  |||| |||||||||||||||||||||| | || ||||  |||||||||||||||||    
T  45366834 ccgcttgatttaattgcttggttt--atttcctccacacatcaagttttattgatttgatttt-acaacgaattcacaacaa 45366912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 1606775 - 1606827
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  1606775 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 13099370 - 13099315
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||  ||||||||||| |||| ||| |||||||||||||||    
T  13099370 ttgctccacacatcaagtttgttattggtgtgatttt-tcatcgaattcacaacaat 13099315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 25542924 - 25542976
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  25542924 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 37412016 - 37411960
Alignment:
Q  94 tccacacatcaagttt--tattggtgtg-gttttctcaacgaattcacaacaatatt 147  Q
    ||||||||||||||||  |||||||||| ||||||||| | ||||||||||||||||    
T  37412016 tccacacatcaagtttgttattggtgtgagttttctcatcaaattcacaacaatatt 37411960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 5e-56; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 28895715 - 28895836
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28895715 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttt 28895813  T
Q  124 tctcaacgaattcacaacaatat 146  Q
    |||||||||||||||||||||||    
T  28895814 tctcaacgaattcacaacaatat 28895836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 28890978 - 28891097
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttt 123  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28890978 tttatctgttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagttttattggtgtggttt 28891076  T
Q  124 tctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||    
T  28891077 tctcaacgaattcacaacaat 28891097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 4812451 - 4812336
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  4812451 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 4812353  T
Q  123 ttctcaacgaattcaca 139  Q
    |||||||||||||||||    
T  4812352 ttctcaacgaattcaca 4812336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 23179531 - 23179410
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23179531 tttatctcttgctgtttacttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtgg 23179432  T
Q  121 ttttctcaacgaattcacaaca 142  Q
    ||||| ||||||||||||||||    
T  23179431 ttttcacaacgaattcacaaca 23179410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 25684853 - 25684972
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  25684853 tttatttcttgctgttttttgtttggattatttgctacccacttgttttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 25684952  T
Q  123 ttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||    
T  25684953 ttctcaacgaattcacaaca 25684972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 16757229 - 16757108
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  16757229 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 16757131  T
Q  122 tttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||    
T  16757130 tttctcaacgaattcacaacaat 16757108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 16752493 - 16752374
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  16752493 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 16752395  T
Q  122 tttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||    
T  16752394 tttctcaacgaattcacaaca 16752374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 28328120 - 28328241
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  28328120 tttaactcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 28328218  T
Q  122 tttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||    
T  28328219 tttctcaacgaattcacaacaat 28328241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 28332843 - 28332962
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  28332843 tttaactcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 28332941  T
Q  122 tttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||    
T  28332942 tttctcaacgaattcacaaca 28332962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 9021079 - 9020954
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagt-tttattggtgtg 119  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  9021079 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcattaagtctttattggtgtg 9020980  T
Q  120 gttttctcaacgaattcacaacaata 145  Q
    |||||||| || ||||||||||||||    
T  9020979 gttttctcgacaaattcacaacaata 9020954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 29554803 - 29554698
Alignment:
Q  44 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||     
T  29554803 gtttggattatttgctaccagcttgatttgattacttgatattaatttactccacgcatcaagtattattggtgtggttttctcaacgaattcacaacac 29554704  T
Q  144 tattca 149  Q
    ||||||    
T  29554703 tattca 29554698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 3276504 - 3276626
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  3276504 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttgattacttgttattaatttgctccacgcatcaagtttttattggtgtg 3276603  T
Q  120 gttttctcaacgaattcacaaca 142  Q
    |||||  ||| ||||||||||||    
T  3276604 gttttaacaaggaattcacaaca 3276626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 591005 - 591126
Alignment:
Q  24 tttatctcttgctgttttttgtt--tggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatc-aagttttattggtgtgg 120  Q
    |||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| || ||||||||||||||    
T  591005 tttatctcttgctgttttattttattggattatttgctacccgcttgatttgattacttggtattaattttttccacgcatcaaatttttattggtgtgg 591104  T
Q  121 ttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||||    
T  591105 ttttctcaacgaattcacaaca 591126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 17799400 - 17799277
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    ||||||||||| |||||   |||||||| |||||||||||||||||||||||||||||||||||||||||| || |||| |||||| |||||||||||||    
T  17799400 tttatctcttgttgtttacttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttacttcacatatcaagtttttattggtgtg 17799301  T
Q  120 gttttctcaacgaattcacaacaa 143  Q
    |||||| |||||||||||||||||    
T  17799300 gttttcacaacgaattcacaacaa 17799277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 4823622 - 4823549
Alignment:
Q  71 ttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4823622 ttgattacttggtattaattttctccacacatcaagttttattggtgtggttttctcaacgaattcacaacaat 4823549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 21034100 - 21034181
Alignment:
Q  45 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgtggtttt 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  21034100 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggtttt 21034181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 26268207 - 26268084
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgt 118  Q
    |||||||||||||||||   |||||||| ||||||| ||||| ||||||||| ||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  26268207 tttatctcttgctgtttacttttgtttgaattattttctaccagcttgatttaattacatggtattaatttgctccacgcatcaagtttattattggtgt 26268108  T
Q  119 ggttttctcaacgaattcacaaca 142  Q
    |||||||  |||||||||||||||    
T  26268107 ggttttcagaacgaattcacaaca 26268084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 30423420 - 30423541
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtg 119  Q
    |||||||||||||||||   |||||||| ||||| |||  ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  30423420 tttatctcttgctgtttatttttgtttgaattatattgtcacccgcttgatttgattgcttggtttta-tttgctccacacatcaagttttattggtgtg 30423518  T
Q  120 gttttctcaacgaattcacaaca 142  Q
     ||||  ||| ||||||||||||    
T  30423519 atttttgcaatgaattcacaaca 30423541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 33032860 - 33032971
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgt 118  Q
    |||||||||||| ||||   |||||||  |||||||||||| ||||||||||||||||||| ||||||||||||| |  |||||||  ||||||||||||    
T  33032860 tttatctcttgccgtttacttttgttttaattatttgctactcgcttgatttgattacttgatattaatttgctctatgcatcaagttttttattggtgt 33032959  T
Q  119 ggttttctcaac 130  Q
     |||||| ||||    
T  33032960 cgttttcacaac 33032971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 28228790 - 28228842
Alignment:
Q  88 atttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaa 140  Q
    |||| ||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  28228790 attttctccacacatcaagttttattggtgtgatttttacaacgaattcacaa 28228842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 2267039 - 2266935
Alignment:
Q  39 tttttgtttggatt-atttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttt-tattggtgtggttttctcaacgaattc 136  Q
    |||||||||| ||| |||||  ||| |||||||||||||  ||||| ||| ||||||| ||||||||||||| |||||||||| ||||  ||||||||||    
T  2267039 tttttgtttgaatttatttgtcacctgcttgatttgattgtttggtttta-tttgctc-acacatcaagtttatattggtgtgatttttgcaacgaattc 2266942  T
Q  137 acaacaa 143  Q
    |||||||    
T  2266941 acaacaa 2266935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 3874435 - 3874488
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  3874435 ttgctccacacatcaagttgttattggtgtgatttt-tcaacgaattcacaacaa 3874488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 28251463 - 28251410
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  28251463 ttgctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 28251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 183257 - 183310
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||  |||||||||| ||||||||| |||||||||||||    
T  183257 ttgctccacacatcaagtttgttattggtgt-gttttctcatcgaattcacaaca 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 15949788 - 15949859
Alignment:
Q  65 cttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcaca 139  Q
    |||||||||||| |||||| |  |||||||||||||||||| |||| |||||||| ||||  |||||||||||||    
T  15949788 cttgatttgatttcttggttt--atttgctccacacatcaaattttcttggtgtgatttt-gcaacgaattcaca 15949859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 14419088 - 14419033
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||| |||||||||||  |||||||||| |||||||| |||||||||||||||    
T  14419088 ttgctccatacatcaagtttgttattggtgtg-ttttctcatcgaattcacaacaat 14419033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 15944909 - 15944989
Alignment:
Q  60 acccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||| |||||||||||| |||||| |  ||||||||||||||||||  ||||||||||| | |||  ||||||||||||||||||    
T  15944909 acccacttgatttgattgcttggttt--atttgctccacacatcaa-atttattggtgt-gatttagcaacgaattcacaacaat 15944989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 24873091 - 24873039
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  24873091 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 24873039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 25952960 - 25953011
Alignment:
Q  93 ctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||  |||||||||| |||||||| ||||||||||||||    
T  25952960 ctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaacaa 25953011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 7493300 - 7493353
Alignment:
Q  89 tttgctccacacatca-agttttattggtgtggttttctcaacgaattcacaacaa 143  Q
    |||||||||||||||| ||||||||||||||| |||| ||  ||||||||||||||    
T  7493300 tttgctccacacatcatagttttattggtgtgattttgtc--cgaattcacaacaa 7493353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 11700875 - 11700804
Alignment:
Q  84 attaatttgctccacacatcaagt--tttattggtgtggttttctcaacgaattcacaacaatattcatact 153  Q
    ||||||||||| |||||||||| |  |||||| ||||| |||  | ||||||||||||||||||| ||||||    
T  11700875 attaatttgcttcacacatcaaatattttattagtgtgatttatttaacgaattcacaacaatatacatact 11700804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 14477687 - 14477741
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||||  ||||||||||| |||| ||| ||||||||||||||    
T  14477687 ttgctccacacatcaagtttgttattggtgtgatttt-tcatcgaattcacaacaa 14477741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 27911514 - 27911568
Alignment:
Q  90 ttgctccacacatcaag--ttttattggtgtggttttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||  ||||||||||||| |||| ||||| ||||||||||||    
T  27911514 ttgctccacacatcaagttttttattggtgtgatttt-tcaacaaattcacaacaa 27911568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 27957933 - 27957987
Alignment:
Q  90 ttgctccacacatcaag--ttttattggtgtggttttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||  ||||||||||||| |||| ||||| ||||||||||||    
T  27957933 ttgctccacacatcaagttttttattggtgtgatttt-tcaacaaattcacaacaa 27957987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 36865976 - 36866023
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaatt 135  Q
    |||||||||||||||||||  |||||| |||||||||| |||||||||    
T  36865976 ttgctccacacatcaagtttgttattgatgtggttttcacaacgaatt 36866023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 231328 - 231445
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  231328 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttt 231426  T
Q  124 tctcaacgaattcacaaca 142  Q
    |||||||||||||||||||    
T  231427 tctcaacgaattcacaaca 231445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 5e-53; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 2736417 - 2736538
Alignment:
Q  24 tttatctcttgctgtttt-ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggtt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  2736417 tttatctcttgctgtttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctctacgcatcaagttttattggtgtggtt 2736516  T
Q  123 ttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||    
T  2736517 ttctcaacgaattcacaacaat 2736538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 27517594 - 27517491
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcac 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27517594 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttctcaacgaattcac 27517495  T
Q  139 aaca 142  Q
    ||||    
T  27517494 aaca 27517491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 33670936 - 33670817
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  33670936 tttacctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgatccacgcatcaagtttttattggtgtggtt 33670837  T
Q  123 ttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||    
T  33670836 ttctcaacgaattcacaaca 33670817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 39680257 - 39680379
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  39680257 tttaactcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 39680356  T
Q  122 tttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||    
T  39680357 tttctcaacgaattcacaacaat 39680379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 22717204 - 22717081
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  22717204 tttatctcttgctgtttatttttgtttggattaattgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagttttattggtgtgg 22717105  T
Q  121 ttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||||    
T  22717104 ttttctcaacgaattcacaacaat 22717081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 39687201 - 39687321
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  39687201 tttaactcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 39687300  T
Q  122 tttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||    
T  39687301 tttctcaacgaattcacaaca 39687321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 22712495 - 22712374
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22712495 tttatctcttgctgtttatttttgtttggattaattgatacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtgg 22712396  T
Q  121 ttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||||    
T  22712395 ttttctcaacgaattcacaaca 22712374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 45679935 - 45680056
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  45679935 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 45680033  T
Q  122 tttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||    
T  45680034 tttctcaacgaattcacaacaat 45680056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 2741153 - 2741260
Alignment:
Q  24 tttatctcttgctgtttt-ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggtt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  2741153 tttatctcttgctgtttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctctacgcatcaagttttattggtgtggtt 2741252  T
Q  123 ttctcaac 130  Q
    ||||||||    
T  2741253 ttctcaac 2741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 38191241 - 38191352
Alignment:
Q  38 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattca 137  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||||    
T  38191241 ttttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcattaagttttattggtgtgattttcacaacgaattca 38191340  T
Q  138 caacaatattca 149  Q
    |||||| |||||    
T  38191341 caacaacattca 38191352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 12781177 - 12781075
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggttttctcaacgaattca 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  12781177 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtatggttttctcaacgaattca 12781078  T
Q  138 caa 140  Q
    |||    
T  12781077 caa 12781075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 17943747 - 17943867
Alignment:
Q  26 tatctcttgctgtttt--ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtggt 121  Q
    ||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||||||| |    
T  17943747 tatctcttgctgttttatttgtttggattatttgctacccgcttaatttgattacttggtattaatttgctccacgcatcaagtttgttattggtgtgtt 17943846  T
Q  122 tttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||    
T  17943847 tttctcaacgaattcacaaca 17943867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 17462650 - 17462768
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||| |||||||||||| |||  |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17462650 tttatttcttgctgttttgtgt--ggattaattgctacccgcttgatttgattactcggtattaatttgctccacacatcaagtttttattggtgtggtt 17462747  T
Q  123 ttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||||||    
T  17462748 ttctcaacgaattcacaacaa 17462768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 20054735 - 20054608
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag---ttttattggt 116  Q
    |||||||||||||||||   ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||    
T  20054735 tttatctcttgctgtttacttttgttttggattatttgctatccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttttattggt 20054636  T
Q  117 gtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||||||||    
T  20054635 gtggttttctcaacgaattcacaacaat 20054608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 37170729 - 37170599
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||||||||||||   |||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  37170729 tttatctcttgctgtttacttttgtttgaattatttactacccacttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 37170630  T
Q  120 gttttctcaacgaattcacaacaatattcat 150  Q
     ||||| |||||||||||||||||| |||||    
T  37170629 attttcacaacgaattcacaacaatcttcat 37170599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 20049991 - 20049866
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag---ttttattggt 116  Q
    |||||||||||||||||   ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||   ||||||||||    
T  20049991 tttatctcttgctgtttacttttgttttggattatttgctatccgattgatttgattacttggtattaatttgctccacgcatcaagtttttttattggt 20049892  T
Q  117 gtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||||||||    
T  20049891 gtggttttctcaacgaattcacaaca 20049866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 30479203 - 30479322
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   ||||||||||||||||||||||| ||||||||||||| || || ||||||| |||||| |||||||| |||||| |||||    
T  30479203 tttatctcttgctgtttatttttgtttggattatttgctacccacttgatttgattattttgtgttaatttactccacgcatcaagtattattgatgtgg 30479302  T
Q  121 ttttctcaacgaattcacaa 140  Q
    |||||||||| |||||||||    
T  30479303 ttttctcaacaaattcacaa 30479322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 7462844 - 7462789
Alignment:
Q  89 tttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||  ||| | ||||||||||||||||||||| |||||    
T  7462844 tttgctccacacatcaagtttgttatcgatgtggttttctcaacgaattcgcaaca 7462789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 22287234 - 22287180
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||    
T  22287234 ttgctccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaacaa 22287180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 42923346 - 42923292
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||    
T  42923346 ttgctccacacatcaagtttgttattggtgtg-ttttcacaacgaattcacaacaa 42923292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 42923404 - 42923350
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||    
T  42923404 ttgctccacacatcaagtttgttattggtgtg-ttttcacaacgaattcacaacaa 42923350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 17849474 - 17849528
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||  |||||||||| |||| ||| |||||||||||||    
T  17849474 ttgctccacacatcaagtttgttattggtgtgattttttcatcgaattcacaaca 17849528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 19007997 - 19008051
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||  |||||||||| |||| ||| |||||||||||||    
T  19007997 ttgctccacacatcaagtttgttattggtgtgattttttcatcgaattcacaaca 19008051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 22707646 - 22707592
Alignment:
Q  93 ctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaata 145  Q
    ||||||||||||| |||  ||||||||||||||||||| ||||||| ||||||||    
T  22707646 ctccacacatcaaatttgttattggtgtggttttctcatcgaattcgcaacaata 22707592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 36561033 - 36560979
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  36561033 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacaat 36560979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 6264046 - 6263991
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||  |||| ||||| |||||||| |||||||||||||||    
T  6264046 ttgctccacacatcaagtttgttattagtgtg-ttttctcatcgaattcacaacaat 6263991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 21520587 - 21520532
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||  |||||||||| ||||||||| ||||||| |||||||    
T  21520587 ttgctccacacatcaagtttgttattggtgt-gttttctcatcgaattcgcaacaat 21520532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 144
Target Start/End: Complemental strand, 28458728 - 28458691
Alignment:
Q  107 ttttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  28458728 ttttattggtgtggttttcacaatgaattcacaacaat 28458691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 36558773 - 36558721
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  36558773 ttgctccacacatcaagttattattggtgtgatttt-tcatcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 19504229 - 19504176
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||  ||| |||||||||||||||    
T  19504229 ttgctccacacatcaagttgttattggtgtgattt--tcatcgaattcacaacaat 19504176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 42453839 - 42453892
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||  ||| |||||||||||||||    
T  42453839 ttgctccacacatcaagttgttattggtgtgattt--tcatcgaattcacaacaat 42453892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 6303524 - 6303644
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  6303524 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 6303622  T
Q  123 ttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||    
T  6303623 ttctcaacgaattcacaacaat 6303644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 10100042 - 10099922
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  10100042 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 10099944  T
Q  123 ttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||    
T  10099943 ttctcaacgaattcacaacaat 10099922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 10094041 - 10093923
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  10094041 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtggtt 10093943  T
Q  123 ttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||    
T  10093942 ttctcaacgaattcacaaca 10093923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 10200923 - 10200805
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  10200923 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtggtt 10200825  T
Q  123 ttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||    
T  10200824 ttctcaacgaattcacaaca 10200805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 54193439 - 54193557
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttt 123  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54193439 tttatctcttgctgtttt-tgtttggattatttgctacccgcttggtttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttt 54193537  T
Q  124 tctc-aacgaattcacaaca 142  Q
    |||| |||||||||||||||    
T  54193538 tctcaaacgaattcacaaca 54193557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 10897214 - 10897338
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  10897214 tttatctcttgctgtttatttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgttccacgcatcaagtttttattggtgtg 10897313  T
Q  120 gttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||||    
T  10897314 gttttctcaacgaattcacaacaat 10897338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 27544504 - 27544619
Alignment:
Q  25 ttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggtttt 124  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  27544504 ttatctcttgctgtttt--gtttggattatttgctacccgcttgatttgattacttgatattaatttgctcaacgcatcaagttttattggtgtggtttt 27544601  T
Q  125 ctcaacgaattcacaaca 142  Q
    ||||||||||||||||||    
T  27544602 ctcaacgaattcacaaca 27544619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 22625947 - 22625827
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22625947 tttatctcttgttgttttt-gtttggattatttgctacccgcttcttttgattacttggtattaatttgctccacacatcaagtttttattggtgtggtt 22625849  T
Q  123 ttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||    
T  22625848 ttctcaacgaattcacaacaat 22625827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 11079724 - 11079846
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11079724 tttatctcttgctgtttacttttgtttgaattatttgctacccacttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtgg 11079823  T
Q  121 ttttctcaacgaattcacaacaa 143  Q
    ||||| |||||||||||||||||    
T  11079824 ttttcacaacgaattcacaacaa 11079846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 5858753 - 5858874
Alignment:
Q  24 tttatctcttgctgttttttgtt--tggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggt 121  Q
    |||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5858753 tttatctcttgctgttttattttgttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggt 5858852  T
Q  122 tttctcaa-cgaattcacaaca 142  Q
    |||||||| |||||||||||||    
T  5858853 tttctcaatcgaattcacaaca 5858874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 54188723 - 54188843
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttt 123  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  54188723 tttatctcttgttgtttt-tgtttggattatttgctacccgcttggtttgattacttggtattaatttgctccacgcatcaaattttattggtgtggttt 54188821  T
Q  124 tctc-aacgaattcacaacaat 144  Q
    |||| |||||||||||||||||    
T  54188822 tctcaaacgaattcacaacaat 54188843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 29897631 - 29897526
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattca 137  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  29897631 ttttgtttggattatttgctacccgcttgatttgattatttggtattaatctgctccacacatcaagtttgttattggtgtggttttctcaacgaattca 29897532  T
Q  138 caacaa 143  Q
    ||||||    
T  29897531 caacaa 29897526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 29913925 - 29913803
Alignment:
Q  26 tatctcttgctgtttt---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtgg 120  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  29913925 tatctcttgctgttttattttgtttggattatttgctacccgcttgatttgattacttggtattaatctgctccacacatcaagtttgttattggtgtgg 29913826  T
Q  121 ttttctcaacgaattcacaacaat 144  Q
    |||||||||| |||||||||||||    
T  29913825 ttttctcaac-aattcacaacaat 29913803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 20031293 - 20031165
Alignment:
Q  24 tttatctcttgctgtt---ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgt 118  Q
    ||||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||| |  ||||||||||||    
T  20031293 tttatctcttgctgttcgtttttgtttggattattcgctacccgcttgatttgattacttggtattaatttgctctacgcatcatgttttttattggtgt 20031194  T
Q  119 ggttttctcaacgaattcacaacaatatt 147  Q
    ||||||| |||||||||||||||||||||    
T  20031193 ggttttcacaacgaattcacaacaatatt 20031165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 10595006 - 10594883
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgt 118  Q
    |||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||| ||||||||||||    
T  10595006 tttatctcttgctgtttacttttgttttggattatttgctacccgcttgatttgattacttggtattaatttactccacgtatcaagtttttattggtgt 10594907  T
Q  119 ggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||||||    
T  10594906 ggttttctcaacgaattcacaaca 10594883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 47882859 - 47882736
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   |||||||| ||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  47882859 tttatctcttgctgtttacttttgtttgaattatttactacccacttgatttgattaattggtattaatttgctccacgcatcaagttttattggtgtgg 47882760  T
Q  121 ttttctcaacgaattcacaacaat 144  Q
    ||||| ||| ||||||||||||||    
T  47882759 ttttcacaatgaattcacaacaat 47882736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 10949236 - 10949110
Alignment:
Q  24 tttatctcttgctgtt---ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    ||||||||||||||||   ||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  10949236 tttatctcttgctgttagtttttgtttgaattatttgctacgagcttgatttgattacttggtattaatttgctccacgcatcaagttttattgatgtgg 10949137  T
Q  121 ttttctcaacgaattcacaacaatatt 147  Q
    ||||| || ||||||||||||| ||||    
T  10949136 ttttcacagcgaattcacaacactatt 10949110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 47878147 - 47878033
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  47878147 tttatctcttgctgtttacttttgtttgaattatttgctacccacttgatttgattacttg-tattaatttgctccacgcatcaagttttattggtgtgg 47878049  T
Q  121 ttttctcaacgaattc 136  Q
    ||||| ||||||||||    
T  47878048 ttttcacaacgaattc 47878033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 3330098 - 3330221
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgt 118  Q
    |||||||||||||||||   ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||  ||||||||||    
T  3330098 tttatctcttgctgtttacttttgtttgagttatttgctatccgcttgatttgattacttggtattaatttgctccgcgcatcaagtttgttattggtgt 3330197  T
Q  119 ggttttctcaacgaattcacaaca 142  Q
    ||||||| ||||||||||||||||    
T  3330198 ggttttcacaacgaattcacaaca 3330221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 10612725 - 10612625
Alignment:
Q  45 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  10612725 tttggattatttgctactcgcttgatttgattatctggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcataacaa 10612626  T
Q  144 t 144  Q
    |    
T  10612625 t 10612625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 27761962 - 27761838
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||||||||||||   |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||| |||||||||||||    
T  27761962 tttatctcttgctgtttacttttgtttgaattatttgctacccgcttgatttgattagttgatattaatttgctccatgcatcaagtttttattggtgtg 27761863  T
Q  120 gttttctcaacgaattcacaacaat 144  Q
     ||||| ||||||||| ||||||||    
T  27761862 tttttcacaacgaatttacaacaat 27761838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 4535841 - 4535946
Alignment:
Q  38 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacaca-tcaagttttattggtgtggttttctcaacgaattc 136  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | || |||||||||| |||||||  ||||||||||    
T  4535841 ttttttgtttggattatttgctacccacttgatttgattacttggtattaatttgctccacgcattaaatttttattggtctggtttttacaacgaattc 4535940  T
Q  137 acaaca 142  Q
    ||||||    
T  4535941 acaaca 4535946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 48390276 - 48390152
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag---ttttattggtg 117  Q
    |||||||||||||||||   |||||||| |||||||| |||||| |||||||||||||||| |||||||||||||||| |||||||   |||||||||||    
T  48390276 tttatctcttgctgtttgtttttgtttgaattatttgttacccgtttgatttgattacttgatattaatttgctccacgcatcaagtttttttattggtg 48390177  T
Q  118 tggttttctcaacgaattcacaaca 142  Q
    ||  |||||||||||||||||||||    
T  48390176 tgactttctcaacgaattcacaaca 48390152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 16462406 - 16462495
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtttt 110  Q
    |||||||||||||||||   ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16462406 tttatctcttgctgtttatttttgtttggattaattgatacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttt 16462495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 38003103 - 38003195
Alignment:
Q  50 attatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||| | |||| ||||||||||||||||||  |||  |||||||||||    
T  38003103 attatttgctacccactttatttgattacttggtattaatttgctccacgcgtcaaattttattggtgtggtttttacaatcaattcacaaca 38003195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 7418306 - 7418378
Alignment:
Q  60 acccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtggttttctcaac 130  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||  ||||||||||||||||| ||||    
T  7418306 acccgcttgatttgattactttgtattaatttgttccacgcatcaagtttattattggtgtggttttcacaac 7418378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 13893668 - 13893789
Alignment:
Q  24 tttatctcttgctgttt--tttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||| ||||||||  |||||||| ||||| |||  |||||||||||||||||  || || |||||||| || || ||||||| |||||||||||||    
T  13893668 tttatctcctgctgtttattttgtttgaattatattgtcacccgcttgatttgattgtttagttttaatttgttcaacgcatcaaggttttattggtgtg 13893767  T
Q  120 gttttctcaacgaattcacaac 141  Q
     ||||| |||||||||||||||    
T  13893768 tttttcacaacgaattcacaac 13893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 27420998 - 27421057
Alignment:
Q  84 attaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||||||||    
T  27420998 attaatttgctcaacacatcaagttttattggtgtgatttt-tcaatgaattcacaacaat 27421057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 16997150 - 16997209
Alignment:
Q  84 attaatttgctccacacatcaagt-tttattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||| |||||| ||||||    
T  16997150 attaatttgctccacatatcaagtatttattggtgtgattttctcaccgaatttacaaca 16997209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 36871202 - 36871147
Alignment:
Q  90 ttgctccacacatcaagt-tttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||| ||||| |||||| |||| |||||||||||||||||||    
T  36871202 ttgctccacacatcaagtatttatcggtgtgattttttcaacgaattcacaacaat 36871147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 28412922 - 28412866
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaatat 146  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||||    
T  28412922 ttgctccacacatcaagttgttattggtgtgttttt-tcatcgaattcacaacaatat 28412866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 14634350 - 14634290
Alignment:
Q  83 tattaatttgctccacacatcaag--ttttattggtgtggttttctcaacgaattcacaacaa 143  Q
    |||||||||| |||||||||||||  ||||||||||||| |||  ||||||||||||||||||    
T  14634350 tattaatttgttccacacatcaagtattttattggtgtgattt--tcaacgaattcacaacaa 14634290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 53468349 - 53468302
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaatt 135  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  53468349 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaatt 53468302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 10621418 - 10621364
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  10621418 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacaat 10621364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 24980073 - 24980126
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||  |||||||||| ||||||||| |||||||||||||    
T  24980073 ttgctccacacatcaagtttgttattggtgt-gttttctcatcgaattcacaaca 24980126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 51674662 - 51674608
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||| |||||||||||  |||||||||| |||||||| |||||||||||||    
T  51674662 ttgctccatacatcaagtttgttattggtgtgattttctcatcgaattcacaaca 51674608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 25389273 - 25389327
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||| |||||||| || |||| ||| ||||||||||||||    
T  25389273 ttgctccacacatcaagttgttattggtatgattttttcatcgaattcacaacaa 25389327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 31151702 - 31151755
Alignment:
Q  90 ttgctccacacatcaagt-tttattggtgtggttttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||    
T  31151702 ttgctccacacatcaagtatttattggtgtgatttt-tcatcgaattcacaacaa 31151755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 458651 - 458705
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaata 145  Q
    ||||||||||||||||||| ||||||||||| |||  ||| ||||||||||||||||    
T  458651 ttgctccacacatcaagttgttattggtgtgattt--tcatcgaattcacaacaata 458705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 747125 - 747177
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  747125 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 1620370 - 1620313
Alignment:
Q  84 attaatttgctccacacatcaagtttt-attggtgtggttttctcaacgaattcacaa 140  Q
    |||||||| ||||||| |||||||||| ||||||||| |||| | |||||||||||||    
T  1620370 attaattttctccacatatcaagtttttattggtgtgatttttttaacgaattcacaa 1620313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 3315047 - 3315102
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||  |||||||||| ||||||||| ||||||| |||||||    
T  3315047 ttgctccacacatcaagtttattattggtgt-gttttctcatcgaattcgcaacaat 3315102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 32219449 - 32219505
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||  ||||| ||||| |||| ||| |||||||||||||||    
T  32219449 ttgctccacacatcaagtttgttatttgtgtgattttttcatcgaattcacaacaat 32219505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 38210737 - 38210789
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  38210737 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 50494365 - 50494417
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  50494365 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 456274 - 456327
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||  ||| |||||||||||||||    
T  456274 ttgctccacacatcaagttgttattggtgtgattt--tcatcgaattcacaacaat 456327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 10958214 - 10958161
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||  ||| |||||||||||||||    
T  10958214 ttgctccacacatcaagttgttattggtgtgattt--tcatcgaattcacaacaat 10958161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 27635551 - 27635504
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaatt 135  Q
    |||||||||||||||||||  ||||||||||| |||||||| ||||||    
T  27635551 ttgctccacacatcaagtttgttattggtgtgattttctcatcgaatt 27635504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 39715836 - 39715883
Alignment:
Q  97 acacatcaagttt--tattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||||||  |||||||| |||||||||| |||||||||||||    
T  39715836 acacatcaagtttgttattggtgcggttttctcatcgaattcacaaca 39715883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 17706 - 17824
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  17706 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 17804  T
Q  123 ttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||    
T  17805 ttctcaacgaattcacaaca 17824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 14282 - 14225
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaatattc 148  Q
    ||||||||||||||||||| ||||||||||| |||  ||| |||||||||||||| ||||    
T  14282 ttgctccacacatcaagttgttattggtgtgattt--tcatcgaattcacaacaaaattc 14225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 31248662 - 31248544
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  31248662 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 31248564  T
Q  123 ttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||    
T  31248563 ttctcaacgaattcacaaca 31248544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 3577460 - 3577338
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  3577460 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 3577361  T
Q  120 gttttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||||    
T  3577360 gttttctcaacgaattcacaaca 3577338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 25941878 - 25942002
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  25941878 tttatctcttgctgtttatttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgttccacgcatcaagtttttattggtgtg 25941977  T
Q  120 gttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||||    
T  25941978 gttttctcaacgaattcacaacaat 25942002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 13883687 - 13883806
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgtggt 121  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  13883687 tttatctcttgctgtttt-tgtttggattatttgctacccgtttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggt 13883785  T
Q  122 tttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||    
T  13883786 tttctcaacgaattcacaaca 13883806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 13878951 - 13879072
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtgg-t 121  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| |    
T  13878951 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttttggtgtggtt 13879049  T
Q  122 tttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||    
T  13879050 tttctcaacgaattcacaacaat 13879072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 30987473 - 30987356
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttt 123  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30987473 tttatctcttgctgttttt-gtttggattatttgctacccacttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttt 30987375  T
Q  124 tctcaacgaattcacaaca 142  Q
     |||  |||||||||||||    
T  30987374 cctcgtcgaattcacaaca 30987356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 25465859 - 25465754
Alignment:
Q  38 ttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggttttctcaacgaattc 136  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  25465859 ttttttgtttggattatttgctacacgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 25465760  T
Q  137 acaaca 142  Q
    ||||||    
T  25465759 acaaca 25465754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 16786161 - 16786265
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcac 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||| |||||||    
T  16786161 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtcttattgttgtggttttctcaacaaattcac 16786260  T
Q  139 aacaa 143  Q
    |||||    
T  16786261 aacaa 16786265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 17694799 - 17694699
Alignment:
Q  45 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggttttctcaacgaattcacaacaa 143  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17694799 tttggattatttgctatccgcttgatttgattacttggtattaatttgctccacacatcaagtttttattggtgtggttttctcaacgaattcacaacaa 17694700  T
Q  144 t 144  Q
    |    
T  17694699 t 17694699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 35201274 - 35201156
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||||||||    
T  35201274 tttatctcttgctgttttt-gtttggattatttgctacccgcttgatttgattactt-gtattaatttgctccacgcatcaagtttttattagtgtggtt 35201177  T
Q  123 ttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||||||    
T  35201176 ttctcaacgaattcacaacaa 35201156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 22351826 - 22351702
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtg 119  Q
    |||||||||||||||||   ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22351826 tttatctcttgctgtttacttttgttttggattatttgttacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtg 22351727  T
Q  120 gttttctcaacgaattcacaacaat 144  Q
     ||||  ||||||||||||||||||    
T  22351726 atttttacaacgaattcacaacaat 22351702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 26887195 - 26887076
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    |||||||||||||| |||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  26887195 tttatctcttgctggtttt-gtttggattaattgctacccgcttgttttgattacttgatattaatttgctccacacatcaagtttttattggtgtggtt 26887097  T
Q  123 ttctcaacgaattcacaacaa 143  Q
    ||||| |||||||||||||||    
T  26887096 ttctcgacgaattcacaacaa 26887076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 22342774 - 22342651
Alignment:
Q  24 tttatctcttgctgttt---tttgtt-tggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtg 119  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  22342774 tttatctcttgctgtttacttttgttatggattatttgctacccgcttgatttgattatttggtattaatttgctccatacatcaagttttattggtgtg 22342675  T
Q  120 gttttctcaacgaattcacaacaa 143  Q
     ||||  |||||||||||||||||    
T  22342674 atttttacaacgaattcacaacaa 22342651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 33216055 - 33216160
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgtggttttctcaacgaattca 137  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||  ||| |||||||    
T  33216055 ttttgtttggattatttgctacccgcttgatatgattacttggtattaatttgctccacgcatcaagttttttattggtgtggtttttacaaggaattca 33216154  T
Q  138 caacaa 143  Q
    ||||||    
T  33216155 caacaa 33216160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 17038449 - 17038550
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||    
T  17038449 tttatttcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtgatt 17038547  T
Q  123 ttc 125  Q
    |||    
T  17038548 ttc 17038550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 12166102 - 12166010
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtggttttctcaac 130  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| ||||    
T  12166102 ttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgtggttttcacaac 12166010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 13467441 - 13467318
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaa--gttttattggtgt 118  Q
    |||||||||| ||||||   |||||||| || |||||||||||| |||||||||||||||||||||||||| |||||| ||||||   ||||||||||||    
T  13467441 tttatctcttactgtttacttttgtttgaatcatttgctacccgtttgatttgattacttggtattaatttactccacgcatcaaattttttattggtgt 13467342  T
Q  119 ggttttctcaacgaattcacaaca 142  Q
    ||||||| ||||||||||||||||    
T  13467341 ggttttcacaacgaattcacaaca 13467318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 19701879 - 19701756
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgt 118  Q
    ||||||||||| |||||   |||||||| ||||||||||| ||| |||||||||||||||||| |||||||| ||||| |||||||||  ||||||||||    
T  19701879 tttatctcttgttgtttacttttgtttgaattatttgctatccgtttgatttgattacttggt-ttaatttgttccacgcatcaagtttattattggtgt 19701781  T
Q  119 ggttttctcaacgaattcacaacaa 143  Q
    ||||||| |||||||||||||||||    
T  19701780 ggttttcacaacgaattcacaacaa 19701756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 26643399 - 26643483
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggtttt 124  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  26643399 ttttgtttgaattattttctatccgcttgatttcattacttggtattaatttgctccacgcatcaagttttattggtgtgctttt 26643483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 26749365 - 26749449
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggtttt 124  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  26749365 ttttgtttgaattattttctatccgcttgatttcattacttggtattaatttgctccacgcatcaagttttattggtgtgctttt 26749449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 5165772 - 5165691
Alignment:
Q  65 cttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||| |||||||||||| |||||    
T  5165772 cttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgtgtttttcacaacgaattcacgacaat 5165691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 10584359 - 10584417
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaatat 146  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  10584359 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaacaatat 10584417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 17066057 - 17066179
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtttt--attggtg 117  Q
    |||||||||||||||||   |||||||| ||||| |||  ||| ||||||||||||| |||| | ||||||| |||||| ||||| |||||  |||||||    
T  17066057 tttatctcttgctgtttatttttgtttgaattatattgtcaccagcttgatttgattgcttgattttaatttactccacgcatcaggttttttattggtg 17066156  T
Q  118 tggttttctcaacgaattcacaa 140  Q
    |||||||| ||| ||||||||||    
T  17066157 tggttttcacaatgaattcacaa 17066179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 26065403 - 26065462
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggtttt-ctcaacgaattcacaacaatatt 147  Q
    ||||||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||||    
T  26065403 ttgctccacacatcaagttgttattggtgtgatttttctcatcgaattcacaacaatatt 26065462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 26085372 - 26085431
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggtttt-ctcaacgaattcacaacaatatt 147  Q
    ||||||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||||    
T  26085372 ttgctccacacatcaagttgttattggtgtgatttttctcatcgaattcacaacaatatt 26085431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 5165805 - 5165772
Alignment:
Q  65 cttgatttgattacttggtattaatttgctccac 98  Q
    ||||||||||||||||||||||||||||||||||    
T  5165805 cttgatttgattacttggtattaatttgctccac 5165772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 5273108 - 5273055
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  5273108 ttgctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 5273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 3629765 - 3629711
Alignment:
Q  89 tttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||    
T  3629765 tttgctccacacatcaagtttgttattggtgt-gttttctcatcgaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 8717247 - 8717193
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  8717247 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacaat 8717193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 24501357 - 24501303
Alignment:
Q  85 ttaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaa 140  Q
    ||||||| ||| |||||||| |||||||||||||| |||| |||||||||||||||    
T  24501357 ttaatttactctacacatcatgttttattggtgtgatttt-tcaacgaattcacaa 24501303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 26068287 - 26068233
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||||    
T  26068287 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacaat 26068233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 11982924 - 11982871
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  11982924 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacaa 11982871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 28037631 - 28037576
Alignment:
Q  89 tttgctccacacatcaag---ttttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||   ||||||||||||| |||| |||||||||||||||||    
T  28037631 tttgctccacacatcaagtatttttattggtgtgatttt-tcaacgaattcacaaca 28037576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 7294201 - 7294260
Alignment:
Q  84 attaatttgctccacacatcaag--ttttattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||| ||||||||||||||  ||||||||||||| |||| | |||||||||||||||    
T  7294201 attaattttctccacacatcaagtattttattggtgtgatttt-ttaacgaattcacaaca 7294260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 12195406 - 12195354
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  12195406 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 26066013 - 26065961
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  26066013 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 29754601 - 29754549
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  29754601 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 29754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 3918783 - 3918841
Alignment:
Q  84 attaatttgctccacacatcaag--ttttattggtgtggttttctcaacgaattcacaac 141  Q
    |||||||||||||||| || |||  ||||||||||||| |||| ||||||||||||||||    
T  3918783 attaatttgctccacaaattaagtattttattggtgtgatttt-tcaacgaattcacaac 3918841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 33309278 - 33309331
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||| ||||||||||| |||  ||| |||||||||||||||    
T  33309278 ttgctccacacatcaagttgttattggtgtgattt--tcatcgaattcacaacaat 33309331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 15831360 - 15831478
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  15831360 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 15831458  T
Q  123 ttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||    
T  15831459 ttctcaacgaattcacaaca 15831478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 15312526 - 15312651
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgt 118  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  15312526 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgt 15312625  T
Q  119 ggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||||||    
T  15312626 ggttttctcaacgaattcacaacaat 15312651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 11853778 - 11853899
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgtggt 121  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||    
T  11853778 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattgcttggtattaatttgctccacccatcaagttttttattggtgtggt 11853876  T
Q  122 tttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||    
T  11853877 tttctcaacgaattcacaacaat 11853899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 18587176 - 18587299
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  18587176 tttatctcttgctgtttatttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 18587275  T
Q  120 gttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||||||||    
T  18587276 gttttctcaacgaattcacaacaa 18587299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 55822472 - 55822592
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| | |||    
T  55822472 tttatctcttgctgttttttgtttggattaattgctacccgcctgatttgattacttgatattaatttgctccacacatcaagtttttattggtatagtt 55822571  T
Q  123 ttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||||||    
T  55822572 ttctcaacgaattcacaacaa 55822592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 16489558 - 16489681
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgt 118  Q
    |||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  16489558 tttatctcttgctgtttacttttgttttggattatttgctacccgcttgatttgattacttgatattaatttgctccacacatcaagtttttattggtgt 16489657  T
Q  119 ggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||||||    
T  16489658 ggttttctcaacgaattcacaaca 16489681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 16688916 - 16688793
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  16688916 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgattcgattacttgatattaatttgctccacgcatcaagtttttattggtgtg 16688817  T
Q  120 gttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||||||||    
T  16688816 gttttctcaacgaattcacaacaa 16688793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 7050246 - 7050124
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  7050246 tttatctcttgctgtttaattttgtttgaattatatgctacccgcttgatttgataacttggtattaatttgctccacgcatcaagttttattggtgtgg 7050147  T
Q  121 ttttctcaacgaattcacaacaa 143  Q
    ||||| |||||||||||||||||    
T  7050146 ttttcacaacgaattcacaacaa 7050124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 4556036 - 4555915
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  4556036 tttatctcttgctgtttacttttgtttggattaattgctacccgcttgatttgattatttggtattaatttgctccacgcatcaaattttattggtgtgg 4555937  T
Q  121 ttttctcaacgaattcacaaca 142  Q
    |||||||||| |||||||||||    
T  4555936 ttttctcaacaaattcacaaca 4555915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 4570320 - 4570422
Alignment:
Q  42 ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaac 141  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  4570320 ttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcaaaacgaattcacaac 4570419  T
Q  142 aat 144  Q
    |||    
T  4570420 aat 4570422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 8529477 - 8529601
Alignment:
Q  24 tttatctcttgctgttt---tttgttt-ggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgt 118  Q
    |||||||||||||||||   ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  8529477 tttatctcttgctgtttacttttgttttggactatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgt 8529576  T
Q  119 ggttttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||||||||||    
T  8529577 ggttttctcaacgaattcacaacaa 8529601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 4558516 - 4558641
Alignment:
Q  24 tttatctcttgctgtt---ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgt 118  Q
    ||||||||||||||||   ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||    
T  4558516 tttatctcttgctgttaatttttgtttgaattatttgatacccgcttgatttgattacttggtaataatttgctccacgcatcaagtttattattggtgt 4558615  T
Q  119 ggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||||||||    
T  4558616 ggttttctcaacgaattcacaacaat 4558641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 15317167 - 15317290
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgt 118  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||  ||||||||||||    
T  15317167 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgattggattacttggtattcatttgctccatgcatcaagttttttattggtgt 15317266  T
Q  119 ggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||||||    
T  15317267 ggttttctcaacgaattcacaaca 15317290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 4885100 - 4885203
Alignment:
Q  41 tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggttttctcaacgaattcaca 139  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||  |||||||||||||    
T  4885100 tttgtttggattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgatttttacaacgaattcaca 4885199  T
Q  140 acaa 143  Q
    ||||    
T  4885200 acaa 4885203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 47566698 - 47566822
Alignment:
Q  24 tttatctcttgctgtttt---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgt 118  Q
    ||||||||||| ||||||   ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||    
T  47566698 tttatctcttgttgttttcttttgtttgaattatttgatatccgcttgatttgattacttggtattaatttgctccatgcatcaagtttattattggtgt 47566797  T
Q  119 ggttttctcaacgaattcacaacaa 143  Q
    ||||||||||| |||||||||||||    
T  47566798 ggttttctcaaagaattcacaacaa 47566822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 36771602 - 36771725
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgt 118  Q
    |||||||||||| ||||   |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||  |||||| |||    
T  36771602 tttatctcttgccgtttacttttgtttgaattatttgctacccgcttgatttgattatttggtattaatttgctcaacgcatcaagtttattattgttgt 36771701  T
Q  119 ggttttctcaacgaattcacaaca 142  Q
    ||||||| |||| |||||||||||    
T  36771702 ggttttcacaacaaattcacaaca 36771725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 36769704 - 36769803
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattca 137  Q
    ||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| ||| |||||||||  ||||||||||||||||| |||||||||||    
T  36769704 ttttgtttgaattatttgctacccacttgatttgattacttgatattaatttgcttcacgcatcaagtttattattggtgtggttttcacaacgaattca 36769803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 31300677 - 31300737
Alignment:
Q  88 atttgctccacacatcaagtttt-attggtgtggttttctcaacgaattcacaacaatatt 147  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  31300677 atttgcttcacgcatcaagtttttattggtgtggttttctcaacgaattcataacaatatt 31300737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 4874410 - 4874336
Alignment:
Q  67 tgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||| |||||| ||||| ||||||||| |||||||||| |||||||| ||||  ||||||||||||||||    
T  4874410 tgatttgattgcttggt-ttaatatgctccacatatcaagttttgttggtgtgatttttgcaacgaattcacaaca 4874336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 16639032 - 16639157
Alignment:
Q  24 tttatctcttgctgttt----tttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtg 117  Q
    |||||||||||||||||    |||| ||||||||| ||||   ||||||||||||||| |||||| ||| |||||||||||||||||| ||||||||||     
T  16639032 tttatctcttgctgtttattttttgcttggattatattgccttccgcttgatttgattgcttggtttta-tttgctccacacatcaagtttttattggta 16639130  T
Q  118 tggttttctcaacgaattcacaacaata 145  Q
    | |||||  ||| |||||||||||||||    
T  16639131 t-gtttttgcaaagaattcacaacaata 16639157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 31300629 - 31300681
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttg 73  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  31300629 tttatctcttgctgtttacttttgtttggattatttgctacccgcttgatttg 31300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 32273860 - 32273806
Alignment:
Q  88 atttgctccacacatcaagttttattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||| ||||||||||||||||||||| ||||  ||||||||||||||||    
T  32273860 atttgctccagacatcaagttttattggtgtgatttttgcaacgaattcacaaca 32273806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 16185746 - 16185684
Alignment:
Q  84 attaatttgctccacacatcaagt--tttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||| |||||||||  |||||||||||| | || |||||||||||||||||||    
T  16185746 attaatttgctccatacatcaagtattttattggtgtgatcttttcaacgaattcacaacaat 16185684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 25613915 - 25613810
Alignment:
Q  39 tttttgtttggattatttgct-acccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgtggttttctcaacgaatt 135  Q
    |||||||||| |||||||  | ||| |||||||||||||  ||||| ||||||||||| ||||||||||  |||||||||||| |||||  |||||||||    
T  25613915 tttttgtttgaattattttttcacctgcttgatttgattgtttggttttaatttgctcaacacatcaagttttttattggtgt-gtttttgcaacgaatt 25613817  T
Q  136 cacaaca 142  Q
    || ||||    
T  25613816 cataaca 25613810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 47563194 - 47563248
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||  ||||||||||||||||||| | |||||||||||    
T  47563194 ttgctccacacatcaagtttgttattggtgtggttttctcatcaaattcacaaca 47563248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 18311269 - 18311213
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||  |||||||||| |||| ||| |||||||||||||||    
T  18311269 ttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaacaat 18311213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 18409246 - 18409190
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||  |||||||||| |||| ||| |||||||||||||||    
T  18409246 ttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaacaat 18409190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 18709056 - 18709003
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| |||||||||||||||| ||| | |||||||||||    
T  18709056 ttgctccacacatcaagttgttattggtgtggttttttcatcaaattcacaaca 18709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 40637513 - 40637566
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||| |||||    
T  40637513 ttgctccacacatcaagttgttattggtgtgatattctcaacgaattcgcaaca 40637566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 47078702 - 47078766
Alignment:
Q  84 attaatttgctccacacatcaagt--tttattggtgtggttttctcaacgaattcacaacaatat 146  Q
    |||| |||||||||||||| ||||  |||||||||||| |||| |||| ||||||||||||||||    
T  47078702 attattttgctccacacattaagtattttattggtgtgattttttcaaggaattcacaacaatat 47078766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 25358073 - 25358122
Alignment:
Q  93 ctccacacatcaagt--tttattggtgtggttttctcaacgaattcacaa 140  Q
    |||||||||||||||  |||||||||||| |||| |||||||||||||||    
T  25358073 ctccacacatcaagtattttattggtgtgattttttcaacgaattcacaa 25358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 51015685 - 51015739
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||| ||||||||||| ||||   ||||||||||||||||    
T  51015685 ttgctccacacatcaagttgttattggtgtgttttttcgaacgaattcacaacaa 51015739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 114
Target Start/End: Original strand, 54906996 - 54907026
Alignment:
Q  84 attaatttgctccacacatcaagttttattg 114  Q
    |||||||||||||||||||||||||||||||    
T  54906996 attaatttgctccacacatcaagttttattg 54907026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 16453743 - 16453798
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||  ||||||||||| |||| ||| |||||||||||||||    
T  16453743 ttgctccacacatcaagtttgttattggtgtgatttt-tcatcgaattcacaacaat 16453798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 22802630 - 22802575
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||  ||||||||||| |||| ||| |||||||||||||||    
T  22802630 ttgctccacacatcaagtttgttattggtgtgatttt-tcatcgaattcacaacaat 22802575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 2891726 - 2891780
Alignment:
Q  89 tttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||  ||||||||||| |||| ||| |||||||||||||    
T  2891726 tttgctccacacatcaagtttgttattggtgtgatttt-tcatcgaattcacaaca 2891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 3824502 - 3824447
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtg-gttttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||  |||||||||||  |||||||| |||||||||||||    
T  3824502 ttgctccacacatcaagtttgttattggtgtgatttttctcatcgaattcacaaca 3824447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 5101355 - 5101405
Alignment:
Q  94 tccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||  |||||||||| |||||||| ||||||||||||||    
T  5101355 tccacacatcaagtttgttattggtgtg-ttttctcatcgaattcacaacaa 5101405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 16931683 - 16931628
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaata 145  Q
    ||||||||||||| ||||| ||||||||||| |||| ||| ||||||||||||||||    
T  16931683 ttgctccacacattaagttgttattggtgtgatttt-tcatcgaattcacaacaata 16931628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 3037 - 2918
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  3037 tttatttcttgctgttttt-gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtt 2939  T
Q  123 ttctcaacgaattcacaacaa 143  Q
    |||||||||||||||||||||    
T  2938 ttctcaacgaattcacaacaa 2918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 5e-47; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 2297965 - 2297849
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttt 123  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  2297965 tttatctcttgctgtttt--gtttggattatttgctacccgcttgatttgattacttggtattaatttactccacgcatcaagttttgttggtgtggttt 2297868  T
Q  124 tctcaacgaattcacaaca 142  Q
    |||||||||||||||||||    
T  2297867 tctcaacgaattcacaaca 2297849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 22673042 - 22673163
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgg 120  Q
    |||||||||||||||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22673042 tttatctcttgctgtttatttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtgg 22673141  T
Q  121 ttttctcaacgaattcacaaca 142  Q
    |||||| |||||||||||||||    
T  22673142 ttttcttaacgaattcacaaca 22673163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 42238466 - 42238589
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtg 119  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  42238466 tttatctcttgctgtttatttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtg 42238565  T
Q  120 gttttctcaacgaattcacaacaa 143  Q
    |||||  |||||||||||||||||    
T  42238566 gtttttacaacgaattcacaacaa 42238589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 1171024 - 1171142
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    |||||||||||||| |||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  1171024 tttatctcttgctggtttt-gtttggattaattgctacccgcttgttttgattacttgatattaatttgctccacacatcaagtttttattggtgtggtt 1171122  T
Q  123 ttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||||    
T  1171123 ttctcaacgaattcacaaca 1171142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 35385406 - 35385296
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggttttctcaacgaattcac 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||    
T  35385406 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtagttttctcaatgaattcac 35385307  T
Q  139 aacaatattca 149  Q
    ||||| |||||    
T  35385306 aacaagattca 35385296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 28786607 - 28786728
Alignment:
Q  24 tttatctcttgctgttt----tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgt 118  Q
    |||||||||||||||||    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  28786607 tttatctcttgctgtttgctttttgtttgaattatttgctacccgcttgatttgattatttggtattaatttgctccacgcatcaagtttttattggtgt 28786706  T
Q  119 ggttttctcaacgaattcacaa 140  Q
    ||||||||||||||||||||||    
T  28786707 ggttttctcaacgaattcacaa 28786728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 1240662 - 1240760
Alignment:
Q  45 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggttttctcaacgaattcacaaca 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||    
T  1240662 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttcctcaacgaattcacaaca 1240760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 25452705 - 25452802
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgtgg 120  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  25452705 tttatctcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtattttattggtgtgg 25452802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 40222993 - 40223101
Alignment:
Q  40 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatc-aagttttattggtgtggttttct-caacgaattca 137  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||| || |||||||||||||||||| | |||||||||||    
T  40222993 ttttgtttggattatttgctaccctcttgatttgattacttggtattaatttactccacgcatcaaatttttattggtgtggttttttacaacgaattca 40223092  T
Q  138 caacaatat 146  Q
    |||||||||    
T  40223093 caacaatat 40223101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 25445706 - 25445803
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgtgg 120  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  25445706 tttatctcttgatgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtattttattggtgtgg 25445803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 20437126 - 20437249
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgt 118  Q
    ||||||||||| |||||   |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  || |||||||    
T  20437126 tttatctcttgttgtttacttttgtttgaattatttgctacccgcttgatttgattacttgatattaatttgctcaacacatcaagtttattgttggtgt 20437225  T
Q  119 ggttttctcaacgaattcacaaca 142  Q
    | ||||| ||||||||||||||||    
T  20437226 gattttcacaacgaattcacaaca 20437249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 11962409 - 11962287
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag--ttttattggtgt 118  Q
    ||||||||||| |||||   |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||  |||||||  ||||||||||||    
T  11962409 tttatctcttgttgtttacttttgtttgaattatttgctacccgcttgatttgattacttagtattaatttgctaca-gcatcaagttttttattggtgt 11962311  T
Q  119 ggttttctcaacgaattcacaaca 142  Q
    ||||||| ||||||||||||||||    
T  11962310 ggttttcacaacgaattcacaaca 11962287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 17841207 - 17841110
Alignment:
Q  39 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattc 136  Q
    |||||||||| |||||||||||||||||| ||||||||||| | ||||||||||| |||| ||||||||||||||||||| |||||| ||||||||||    
T  17841207 tttttgtttgaattatttgctacccgcttaatttgattactcgatattaatttgccccacgcatcaagttttattggtgtagttttcacaacgaattc 17841110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 16093268 - 16093144
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgt 118  Q
    ||||||||||| |||||   |||||||| |||||||| ||  ||||||||||||||||||||||||||||| |||||| |||||||||  ||||||||||    
T  16093268 tttatctcttgttgtttacttttgtttgaattatttgttattcgcttgatttgattacttggtattaatttactccacgcatcaagtttattattggtgt 16093169  T
Q  119 gg-ttttctcaacgaattcacaaca 142  Q
    || ||||| ||||||||||||||||    
T  16093168 ggtttttcacaacgaattcacaaca 16093144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 10627611 - 10627697
Alignment:
Q  60 acccgcttgatttgattacttggtattaatttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||||||  ||||||||||||||||| ||| ||||||||||||||    
T  10627611 acccgcttgatttgattgcttggttttaatttgctccacgcatcaagtttattattggtgtggttttcacaatgaattcacaacaat 10627697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 31782413 - 31782309
Alignment:
Q  39 tttttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtggttttctcaacgaattca 137  Q
    |||||||||| ||||| |||  ||||||||||||||||| |||||| |  || |||||||||||||||||||||||||| || ||||  |||| ||||||    
T  31782413 tttttgtttgaattatattgtcacccgcttgatttgatttcttggttt--atatgctccacacatcaagttttattggtatgatttttgcaacaaattca 31782316  T
Q  138 caacaat 144  Q
    |||||||    
T  31782315 caacaat 31782309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 37705680 - 37705625
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  37705680 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaacaa 37705625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 17818388 - 17818338
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtggttttctcaacgaattcac 138  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  17818388 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcac 17818338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 26406442 - 26406340
Alignment:
Q  24 tttatctcttgctgttt---tttgtttggattat-ttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtg 119  Q
    |||||||||||||||||   |||| ||| ||||| |||  |||| |||||||||||| |||||| |  |||||||||||||||||| |||||||||||||    
T  26406442 tttatctcttgctgtttatttttgcttgaattatattgtcacccacttgatttgattgcttggttt--atttgctccacacatcaaattttattggtgtg 26406345  T
Q  120 gtttt 124  Q
     ||||    
T  26406344 atttt 26406340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 10528990 - 10528937
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||| ||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  10528990 ttgcttcacacatcaagttgttattggtgtgattttctcatcgaattcacaaca 10528937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 34033479 - 34033438
Alignment:
Q  83 tattaatttgctccacacatcaagttttattggtgtggtttt 124  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  34033479 tattaatttgctccacacatcacgttttattggtgtgatttt 34033438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 26098184 - 26098127
Alignment:
Q  90 ttgctccacacatcaagttt--tattggtgtg-gttttctcaacgaattcacaacaat 144  Q
    ||||||||||||||||||||  |||||||||| ||||||||| ||||||| |||||||    
T  26098184 ttgctccacacatcaagtttgatattggtgtgagttttctcatcgaattcgcaacaat 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 3373029 - 3372977
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||    
T  3373029 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 6745454 - 6745509
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||  |||||||||| ||||||||| ||||||| |||||||    
T  6745454 ttgctccacacatcaagtttgttattggtgt-gttttctcatcgaattcgcaacaat 6745509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 20505740 - 20505685
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||  |||||||||| |||||||||  ||||||||||||||    
T  20505740 ttgctccacacatcaagtttgttattggtgt-gttttctcattgaattcacaacaat 20505685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 16540 - 16658
Alignment:
Q  24 tttatctcttgctgttttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaag-ttttattggtgtggtt 122  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||    
T  16540 tttatttcttgctgtttt-tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgatt 16638  T
Q  123 ttctcaacgaattcacaacaat 144  Q
    |  ||| |||||||||||||||    
T  16639 t--tcatcgaattcacaacaat 16658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 16965 - 16883
Alignment:
Q  63 cgcttgatttgattacttggtattaatttgctccacacatcaagtttt-attggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  16965 cgcttgatttgattacttggtattaattttttccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacaat 16883  T

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Target: scaffold0267 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 421 - 473
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaaca 142  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  421 ttgctccacacatcaagttgttattggtgtgattt-ctcaacgaattcacaaca 473  T

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Target: scaffold0472 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 6594 - 6647
Alignment:
Q  90 ttgctccacacatcaagtt-ttattggtgtggttttctcaacgaattcacaacaa 143  Q
    ||||||||||||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  6594 ttgctccacacatcaagttgttattggtgtgatttt-tcatcgaattcacaacaa 6647  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 80252 - 80307
Alignment:
Q  90 ttgctccacacatcaagtt--ttattggtgtggttttctcaacgaattcacaacaat 144  Q
    |||||||||||||||||||  |||||||||| ||||||||| ||||||| |||||||    
T  80252 ttgctccacacatcaagtttgttattggtgt-gttttctcatcgaattcgcaacaat 80307  T

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