View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3941_high_19 (Length: 386)

Name: NF3941_high_19
Description: NF3941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3941_high_19
NF3941_high_19
[»] chr5 (50 HSPs)
chr5 (61-378)||(16546182-16546502)
chr5 (62-378)||(40381855-40382174)
chr5 (62-344)||(40379678-40379963)
chr5 (61-345)||(16543993-16544280)
chr5 (62-344)||(10592844-10593128)
chr5 (60-345)||(25077705-25077993)
chr5 (60-345)||(25135674-25135962)
chr5 (127-344)||(22536634-22536852)
chr5 (106-380)||(27445328-27445602)
chr5 (129-380)||(26177430-26177685)
chr5 (167-378)||(29722118-29722332)
chr5 (127-336)||(29719974-29720187)
chr5 (128-331)||(24136266-24136470)
chr5 (106-344)||(43599079-43599318)
chr5 (106-344)||(43604571-43604810)
chr5 (106-344)||(43610063-43610302)
chr5 (106-344)||(27450171-27450409)
chr5 (61-336)||(18441945-18442224)
chr5 (61-336)||(9789521-9789800)
chr5 (161-380)||(28807040-28807260)
chr5 (161-344)||(30631764-30631948)
chr5 (127-380)||(16409041-16409298)
chr5 (129-332)||(26170370-26170576)
chr5 (106-336)||(29751505-29751715)
chr5 (106-380)||(43592634-43592890)
chr5 (130-345)||(1456637-1456852)
chr5 (127-332)||(16407654-16407862)
chr5 (162-380)||(37560911-37561130)
chr5 (161-344)||(15045096-15045279)
chr5 (222-336)||(29752266-29752381)
chr5 (167-344)||(29402550-29402728)
chr5 (161-380)||(33768587-33768808)
chr5 (221-332)||(15465000-15465112)
chr5 (301-380)||(43625605-43625684)
chr5 (161-380)||(31401310-31401531)
chr5 (221-332)||(36931856-36931968)
chr5 (162-344)||(37556125-37556308)
chr5 (161-349)||(33791719-33791909)
chr5 (66-216)||(35388016-35388169)
chr5 (121-263)||(38219803-38219947)
chr5 (181-332)||(9352820-9352972)
chr5 (161-339)||(2785778-2785957)
chr5 (132-282)||(31180637-31180787)
chr5 (287-345)||(31180773-31180831)
chr5 (287-339)||(14520796-14520848)
chr5 (323-367)||(28832772-28832816)
chr5 (161-339)||(31396495-31396674)
chr5 (295-332)||(35388196-35388233)
chr5 (287-337)||(12083658-12083708)
chr5 (287-332)||(11916457-11916502)
[»] chr7 (44 HSPs)
chr7 (62-378)||(6592636-6592955)
chr7 (65-344)||(18392498-18392780)
chr7 (62-344)||(6594852-6595137)
chr7 (125-344)||(32060668-32060888)
chr7 (50-344)||(1562290-1562587)
chr7 (126-380)||(21640204-21640459)
chr7 (127-344)||(20343500-20343718)
chr7 (65-247)||(18389062-18389246)
chr7 (106-336)||(24789435-24789665)
chr7 (63-344)||(2058321-2058604)
chr7 (66-380)||(18409116-18409435)
chr7 (126-344)||(20357028-20357247)
chr7 (66-332)||(21646360-21646630)
chr7 (127-332)||(43504500-43504708)
chr7 (107-380)||(12397267-12397528)
chr7 (128-332)||(39730946-39731153)
chr7 (107-344)||(12406619-12406857)
chr7 (66-332)||(18413992-18414262)
chr7 (128-301)||(1532947-1533121)
chr7 (128-344)||(4873505-4873721)
chr7 (161-345)||(21811738-21811923)
chr7 (127-332)||(48408411-48408619)
chr7 (161-380)||(24265641-24265861)
chr7 (66-332)||(25767263-25767527)
chr7 (161-345)||(24023818-24024003)
chr7 (288-378)||(18390506-18390596)
chr7 (128-348)||(31109066-31109287)
chr7 (161-380)||(16880476-16880696)
chr7 (268-367)||(21983790-21983890)
chr7 (181-344)||(2479795-2479960)
chr7 (268-344)||(47264190-47264267)
chr7 (161-344)||(24260821-24261005)
chr7 (161-347)||(16885331-16885518)
chr7 (268-344)||(44847619-44847696)
chr7 (284-332)||(1532897-1532945)
chr7 (323-380)||(9189464-9189520)
chr7 (268-344)||(21989454-21989531)
chr7 (340-380)||(20000330-20000370)
chr7 (287-337)||(79955-80005)
chr7 (268-302)||(4509335-4509369)
chr7 (268-302)||(4511177-4511211)
chr7 (268-302)||(6431467-6431501)
chr7 (286-331)||(49092237-49092282)
chr7 (287-338)||(46515808-46515860)
[»] chr3 (72 HSPs)
chr3 (62-378)||(10066881-10067201)
chr3 (62-378)||(10057993-10058313)
chr3 (62-378)||(10060215-10060535)
chr3 (62-378)||(10062437-10062757)
chr3 (62-378)||(10064659-10064979)
chr3 (50-378)||(4598808-4599141)
chr3 (62-378)||(10210944-10211264)
chr3 (62-345)||(3617033-3617319)
chr3 (62-336)||(10055813-10056091)
chr3 (63-344)||(4601043-4601328)
chr3 (62-344)||(6716085-6716369)
chr3 (57-344)||(25637013-25637303)
chr3 (62-350)||(54634704-54634994)
chr3 (62-378)||(6718254-6718553)
chr3 (125-344)||(10208778-10208999)
chr3 (62-344)||(45282585-45282850)
chr3 (65-344)||(40372256-40372538)
chr3 (66-380)||(23198247-23198566)
chr3 (106-344)||(8477764-8478002)
chr3 (107-377)||(22172629-22172899)
chr3 (128-380)||(28503283-28503535)
chr3 (129-380)||(1306385-1306640)
chr3 (65-344)||(7167600-7167882)
chr3 (130-336)||(800694-800903)
chr3 (121-328)||(27352097-27352305)
chr3 (128-344)||(28501152-28501368)
chr3 (107-332)||(23200489-23200716)
chr3 (127-298)||(2671111-2671283)
chr3 (161-344)||(18656844-18657029)
chr3 (161-380)||(32475887-32476108)
chr3 (161-380)||(8512643-8512863)
chr3 (161-380)||(2676538-2676759)
chr3 (132-282)||(8738585-8738736)
chr3 (132-282)||(9090823-9090974)
chr3 (127-332)||(26928093-26928301)
chr3 (181-367)||(37408013-37408200)
chr3 (220-332)||(7782586-7782699)
chr3 (181-332)||(33386150-33386302)
chr3 (181-332)||(37726134-37726286)
chr3 (66-282)||(32143664-32143884)
chr3 (161-332)||(2672431-2672603)
chr3 (121-332)||(27453355-27453568)
chr3 (286-380)||(36029658-36029752)
chr3 (323-380)||(3327806-3327863)
chr3 (161-337)||(32480745-32480922)
chr3 (323-380)||(37466876-37466932)
chr3 (61-197)||(7782445-7782584)
chr3 (161-344)||(8517523-8517707)
chr3 (287-344)||(8738542-8738599)
chr3 (287-344)||(9090780-9090837)
chr3 (324-380)||(6794184-6794240)
chr3 (287-339)||(21711768-21711820)
chr3 (161-344)||(24968520-24968704)
chr3 (189-332)||(27027174-27027318)
chr3 (285-344)||(27974433-27974493)
chr3 (287-335)||(40734084-40734132)
chr3 (285-332)||(32143868-32143915)
chr3 (287-337)||(16264896-16264946)
chr3 (287-337)||(30709266-30709316)
chr3 (287-348)||(39032013-39032075)
chr3 (287-367)||(40734984-40735063)
chr3 (285-331)||(27985971-27986017)
chr3 (181-282)||(27986001-27986103)
chr3 (294-338)||(1730915-1730959)
chr3 (287-339)||(27038608-27038660)
chr3 (287-338)||(40592251-40592302)
chr3 (287-345)||(16498636-16498694)
chr3 (287-337)||(35926057-35926106)
chr3 (286-336)||(40845220-40845270)
chr3 (287-337)||(48438782-48438832)
chr3 (202-243)||(36536789-36536830)
chr3 (340-380)||(4386466-4386505)
[»] chr6 (54 HSPs)
chr6 (62-378)||(34166632-34166952)
chr6 (50-378)||(16554420-16554750)
chr6 (50-378)||(16630976-16631306)
chr6 (107-344)||(16578863-16579101)
chr6 (107-344)||(16616279-16616517)
chr6 (108-344)||(25420797-25421034)
chr6 (62-344)||(6136263-6136547)
chr6 (62-344)||(33342402-33342688)
chr6 (62-346)||(6026832-6027119)
chr6 (62-336)||(34164452-34164730)
chr6 (125-336)||(13150857-13151070)
chr6 (126-336)||(27647476-27647687)
chr6 (50-378)||(16652682-16652993)
chr6 (62-237)||(25421000-25421176)
chr6 (107-380)||(11857330-11857603)
chr6 (65-332)||(5674242-5674512)
chr6 (165-380)||(14741890-14742106)
chr6 (131-336)||(411694-411903)
chr6 (178-344)||(30125018-30125185)
chr6 (127-331)||(2171883-2172090)
chr6 (66-332)||(22709362-22709632)
chr6 (107-336)||(3073103-3073334)
chr6 (128-345)||(22010188-22010405)
chr6 (126-282)||(5266453-5266610)
chr6 (161-344)||(6438899-6439083)
chr6 (161-380)||(33335393-33335614)
chr6 (220-336)||(6097860-6097977)
chr6 (250-336)||(34151836-34151922)
chr6 (221-336)||(26253598-26253714)
chr6 (107-339)||(16839092-16839325)
chr6 (161-344)||(5343880-5344064)
chr6 (161-339)||(33329938-33330117)
chr6 (165-282)||(14737128-14737246)
chr6 (161-282)||(28155133-28155255)
chr6 (268-345)||(23896880-23896958)
chr6 (287-344)||(5266596-5266653)
chr6 (287-344)||(14737085-14737142)
chr6 (161-339)||(6005822-6006001)
chr6 (127-197)||(6097786-6097858)
chr6 (289-344)||(28155090-28155145)
chr6 (287-338)||(5016975-5017026)
chr6 (287-338)||(31085952-31086003)
chr6 (324-378)||(16568599-16568652)
chr6 (287-344)||(5571749-5571806)
chr6 (1-34)||(16554762-16554795)
chr6 (1-34)||(16578760-16578793)
chr6 (1-34)||(16616587-16616620)
chr6 (1-34)||(16631318-16631351)
chr6 (287-347)||(24714938-24715000)
chr6 (121-216)||(26253698-26253795)
chr6 (55-100)||(6097732-6097776)
chr6 (202-239)||(13020087-13020124)
chr6 (1-34)||(16653005-16653038)
chr6 (292-337)||(21272469-21272514)
[»] chr4 (41 HSPs)
chr4 (62-378)||(5137841-5138161)
chr4 (62-378)||(8395157-8395475)
chr4 (62-336)||(7122275-7122552)
chr4 (62-344)||(5135649-5135935)
chr4 (153-378)||(7124455-7124681)
chr4 (62-344)||(8392982-8393266)
chr4 (65-344)||(24742295-24742577)
chr4 (128-380)||(9228650-9228902)
chr4 (161-378)||(18856125-18856343)
chr4 (131-336)||(31495685-31495893)
chr4 (60-332)||(13992590-13992866)
chr4 (118-344)||(51520824-51521050)
chr4 (128-346)||(56141509-56141728)
chr4 (107-332)||(28467990-28468217)
chr4 (128-344)||(9223899-9224115)
chr4 (161-344)||(5733062-5733247)
chr4 (161-344)||(3814422-3814605)
chr4 (127-282)||(29761040-29761196)
chr4 (161-344)||(45347317-45347501)
chr4 (254-344)||(18860431-18860521)
chr4 (165-304)||(18712295-18712435)
chr4 (285-367)||(5143807-5143890)
chr4 (221-332)||(31985140-31985252)
chr4 (287-380)||(16628310-16628403)
chr4 (287-369)||(6742864-6742946)
chr4 (288-380)||(3778116-3778207)
chr4 (284-339)||(8689042-8689097)
chr4 (66-216)||(31985236-31985389)
chr4 (287-332)||(29761182-29761227)
chr4 (161-281)||(45356861-45356982)
chr4 (268-339)||(5148225-5148296)
chr4 (287-337)||(38151918-38151968)
chr4 (286-338)||(5268698-5268750)
chr4 (287-337)||(10047932-10047982)
chr4 (287-337)||(16622774-16622824)
chr4 (287-338)||(54867745-54867796)
chr4 (202-236)||(48142823-48142857)
chr4 (202-236)||(52083009-52083043)
chr4 (202-236)||(52094016-52094050)
chr4 (287-332)||(36314716-36314761)
chr4 (287-332)||(36328925-36328970)
[»] chr1 (34 HSPs)
chr1 (50-344)||(44203218-44203516)
chr1 (57-345)||(9036002-9036292)
chr1 (106-336)||(20622581-20622812)
chr1 (107-336)||(40281967-40282199)
chr1 (127-380)||(19360876-19361133)
chr1 (161-380)||(44023341-44023561)
chr1 (107-344)||(21053540-21053780)
chr1 (161-380)||(41391002-41391221)
chr1 (128-336)||(9986794-9987005)
chr1 (161-380)||(25444556-25444776)
chr1 (161-344)||(39445898-39446082)
chr1 (66-332)||(19365781-19366051)
chr1 (127-328)||(51765007-51765211)
chr1 (161-344)||(25439399-25439583)
chr1 (161-345)||(1054513-1054698)
chr1 (128-282)||(24793709-24793864)
chr1 (221-332)||(24202264-24202376)
chr1 (120-348)||(13604091-13604322)
chr1 (128-265)||(24786905-24787042)
chr1 (287-380)||(13598967-13599059)
chr1 (161-282)||(41398657-41398778)
chr1 (66-197)||(24202379-24202513)
chr1 (287-344)||(24793666-24793723)
chr1 (323-380)||(47102298-47102354)
chr1 (161-240)||(43988054-43988133)
chr1 (287-349)||(41398764-41398826)
chr1 (287-332)||(21536125-21536170)
chr1 (287-331)||(37070334-37070378)
chr1 (268-339)||(26644379-26644450)
chr1 (324-378)||(28220796-28220850)
chr1 (287-344)||(3282273-3282331)
chr1 (287-345)||(13659840-13659898)
chr1 (1-34)||(9036310-9036343)
chr1 (287-328)||(16124197-16124238)
[»] scaffold0674 (1 HSPs)
scaffold0674 (62-372)||(4025-4338)
[»] scaffold0137 (2 HSPs)
scaffold0137 (62-345)||(5858-6145)
scaffold0137 (1-34)||(6167-6200)
[»] scaffold0565 (1 HSPs)
scaffold0565 (50-344)||(2888-3185)
[»] chr2 (29 HSPs)
chr2 (50-344)||(12647670-12647967)
chr2 (72-344)||(9295862-9296137)
chr2 (128-344)||(14291908-14292125)
chr2 (128-344)||(11098387-11098604)
chr2 (61-332)||(30832934-30833209)
chr2 (129-332)||(25410047-25410253)
chr2 (61-336)||(6266283-6266562)
chr2 (63-332)||(4484637-4484910)
chr2 (66-332)||(3492094-3492364)
chr2 (129-332)||(32289161-32289367)
chr2 (128-344)||(39811477-39811693)
chr2 (161-380)||(19344825-19345046)
chr2 (107-332)||(40739217-40739444)
chr2 (222-344)||(32247229-32247352)
chr2 (267-345)||(44310470-44310548)
chr2 (287-380)||(39483443-39483535)
chr2 (324-380)||(14634383-14634438)
chr2 (161-331)||(19349683-19349854)
chr2 (287-337)||(8389631-8389681)
chr2 (285-339)||(36757423-36757477)
chr2 (285-344)||(28258669-28258729)
chr2 (287-338)||(33528104-33528155)
chr2 (287-337)||(10706733-10706783)
chr2 (287-337)||(21630511-21630561)
chr2 (293-338)||(20522794-20522839)
chr2 (202-236)||(2334769-2334803)
chr2 (287-337)||(23077952-23078002)
chr2 (120-263)||(28258733-28258877)
chr2 (161-217)||(32247189-32247245)
[»] chr8 (31 HSPs)
chr8 (62-347)||(3439085-3439371)
chr8 (62-345)||(42575623-42575910)
chr8 (126-380)||(33037251-33037506)
chr8 (125-344)||(15290143-15290364)
chr8 (125-344)||(15470512-15470733)
chr8 (107-344)||(4759534-4759771)
chr8 (106-375)||(18869990-18870259)
chr8 (62-282)||(25689604-25689826)
chr8 (128-344)||(30656065-30656282)
chr8 (128-344)||(36979797-36980014)
chr8 (121-344)||(18852627-18852851)
chr8 (107-331)||(1261428-1261654)
chr8 (128-344)||(7289427-7289644)
chr8 (161-344)||(10683739-10683923)
chr8 (142-332)||(2627331-2627522)
chr8 (126-337)||(6311717-6311928)
chr8 (148-332)||(26288319-26288504)
chr8 (148-332)||(26301576-26301761)
chr8 (148-332)||(26313570-26313755)
chr8 (161-344)||(39784325-39784509)
chr8 (126-380)||(10688582-10688817)
chr8 (165-344)||(25327664-25327844)
chr8 (222-332)||(31042921-31043032)
chr8 (181-344)||(7412787-7412952)
chr8 (287-344)||(25689561-25689618)
chr8 (161-339)||(35745794-35745973)
chr8 (287-338)||(5701958-5702009)
chr8 (323-380)||(19751853-19751909)
chr8 (287-332)||(4456575-4456620)
chr8 (346-380)||(35741124-35741158)
chr8 (287-331)||(23799105-23799149)
[»] scaffold0491 (2 HSPs)
scaffold0491 (127-380)||(9088-9344)
scaffold0491 (66-332)||(11471-11740)
[»] scaffold0188 (1 HSPs)
scaffold0188 (127-332)||(17444-17652)
[»] scaffold0286 (1 HSPs)
scaffold0286 (127-331)||(21953-22160)
[»] scaffold0464 (1 HSPs)
scaffold0464 (161-344)||(761-945)
[»] scaffold0355 (1 HSPs)
scaffold0355 (107-344)||(3337-3575)
[»] scaffold0197 (2 HSPs)
scaffold0197 (161-380)||(13748-13968)
scaffold0197 (128-380)||(18627-18880)
[»] scaffold0259 (1 HSPs)
scaffold0259 (107-380)||(1703-1977)
[»] scaffold1519 (1 HSPs)
scaffold1519 (66-304)||(523-765)
[»] scaffold0135 (1 HSPs)
scaffold0135 (128-344)||(34554-34770)
[»] scaffold0006 (4 HSPs)
scaffold0006 (120-348)||(132748-132979)
scaffold0006 (287-380)||(6252-6344)
scaffold0006 (287-338)||(3060-3111)
scaffold0006 (287-345)||(149601-149659)
[»] scaffold1455 (1 HSPs)
scaffold1455 (269-344)||(1709-1784)
[»] scaffold0140 (1 HSPs)
scaffold0140 (221-332)||(7924-8036)
[»] scaffold0665 (2 HSPs)
scaffold0665 (165-282)||(8112-8230)
scaffold0665 (287-344)||(8216-8273)
[»] scaffold0028 (1 HSPs)
scaffold0028 (107-345)||(148443-148682)
[»] scaffold0510 (1 HSPs)
scaffold0510 (268-345)||(1082-1160)
[»] scaffold0009 (1 HSPs)
scaffold0009 (161-337)||(176457-176634)
[»] scaffold0087 (2 HSPs)
scaffold0087 (268-332)||(43447-43511)
scaffold0087 (285-339)||(36330-36384)
[»] scaffold0098 (1 HSPs)
scaffold0098 (285-332)||(45744-45791)
[»] scaffold0084 (1 HSPs)
scaffold0084 (202-240)||(25245-25283)
[»] scaffold0036 (1 HSPs)
scaffold0036 (287-358)||(86153-86225)


Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 61 - 378
Target Start/End: Complemental strand, 16546502 - 16546182
Alignment:
Q  61 ccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagg 157  Q
    ||||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16546502 ccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagg 16546404  T
Q  158 aacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaa-cctagct 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  16546403 aacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagct 16546304  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacctt 356  Q
    |||||||||   |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  16546303 cacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacatttctccacctt 16546204  T
Q  357 gacttctaatttggtgatgatg 378  Q
    ||||||||||||||||||||||    
T  16546203 gacttctaatttggtgatgatg 16546182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 40382174 - 40381855
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40382174 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 40382076  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaa-cctagctc 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  40382075 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctc 40381976  T
Q  258 acggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttg 357  Q
    ||||||||   |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  40381975 acggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaagacaatctcaacatttctccaccttg 40381876  T
Q  358 acttctaatttggtgatgatg 378  Q
    |||||||||||||||||||||    
T  40381875 acttctaatttggtgatgatg 40381855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 62 - 344
Target Start/End: Complemental strand, 40379963 - 40379678
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40379963 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 40379865  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaa-cctagctc 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||    
T  40379864 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctc 40379765  T
Q  258 acggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||||   |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40379764 acggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 40379678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 61 - 345
Target Start/End: Complemental strand, 16544280 - 16543993
Alignment:
Q  61 ccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagg 157  Q
    ||||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16544280 ccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagg 16544182  T
Q  158 aacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaa-cctagct 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||    
T  16544181 aacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgtaaccctagct 16544082  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    ||| |||||   |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  16544081 cacagcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacat 16543993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 62 - 344
Target Start/End: Complemental strand, 10593128 - 10592844
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| || | |||||||||||   ||||  |||||||||| ||||| || |||||||||||||| ||||| |  || ||| |    
T  10593128 cttcaaatctgcacaagaacacttaca-tactagtcttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccaccgaagaa 10593030  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctca 258  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  10593029 acgaccagtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctatctca 10592930  T
Q  259 cggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10592929 cggcacccggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 60 - 345
Target Start/End: Complemental strand, 25077993 - 25077705
Alignment:
Q  60 cccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaag 156  Q
    |||||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25077993 cccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaag 25077895  T
Q  157 gaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactc-tgcaacc-tag 254  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| |||||||| |||| | | ||||| |||    
T  25077894 gaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgattt-gcacccctacaaccctag 25077796  T
Q  255 ctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    |||||||||||   ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  25077795 ctcacggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaactcaacat 25077705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 60 - 345
Target Start/End: Complemental strand, 25135962 - 25135674
Alignment:
Q  60 cccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaag 156  Q
    |||||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25135962 cccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaag 25135864  T
Q  157 gaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactc-tgcaacc-tag 254  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| |||||||| |||| | | ||||| |||    
T  25135863 gaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgattt-gcacccctacaaccctag 25135765  T
Q  255 ctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    |||||||||||   ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  25135764 ctcacggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaactcaacat 25135674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 127 - 344
Target Start/End: Original strand, 22536634 - 22536852
Alignment:
Q  127 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcg 226  Q
    |||||||||||||| || || |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||| |    
T  22536634 aatcgtgtcacgatctgtgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattg 22536733  T
Q  227 tgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    || ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  22536734 tgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaa 22536833  T
Q  326 tttgaagacaatttcaaca 344  Q
    |||||||||||| ||||||    
T  22536834 tttgaagacaatctcaaca 22536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 106 - 380
Target Start/End: Original strand, 27445328 - 27445602
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    |||||||| || ||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  27445328 caatcgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 27445426  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | |||||| |||||||| ||   |||||| |||||||||||| ||  |||||||||||||||| |||||||||||||||||||||    
T  27445427 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 27445526  T
Q  305 cctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
     ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  27445527 tctgttcttctagaccacaaatttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgatgtc 27445602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 129 - 380
Target Start/End: Complemental strand, 26177685 - 26177430
Alignment:
Q  129 tcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcg 226  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||   ||||    
T  26177685 tcgtgtcacgattggtgcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcg 26177586  T
Q  227 tgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    ||||||||||| |||| |||||| | ||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  26177585 tgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaa 26177486  T
Q  326 tttgaagac-aatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||    
T  26177485 tttgaagccaaatctcaacatttctccaccttgacttctaatttggtggtgatgtc 26177430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 167 - 378
Target Start/End: Complemental strand, 29722332 - 29722118
Alignment:
Q  167 tccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc 265  Q
    ||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||| ||||  ||||  ||||||||| |||||    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcacc 29722233  T
Q  266 -cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaacatttctccaccttgacttct 363  Q
     ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  29722232 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacatttctccaccttgacttct 29722133  T
Q  364 aatttggtgatgatg 378  Q
    |||||||||||||||    
T  29722132 aatttggtgatgatg 29722118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 127 - 336
Target Start/End: Complemental strand, 29720187 - 29719974
Alignment:
Q  127 aatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgattttcccaaa 223  Q
    |||||||||||||||  ||| |||||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| ||  ||    
T  29720187 aatcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaa 29720088  T
Q  224 tcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccac 322  Q
    |||||||||||||| |||| |||||  ||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  29720087 tcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccac 29719988  T
Q  323 aaatttgaagacaa 336  Q
    ||||||||||||||    
T  29719987 aaatttgaagacaa 29719974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 128 - 331
Target Start/End: Original strand, 24136266 - 24136470
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| |  ||||||||||||||| || | |||||    
T  24136266 atcgtgtcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgt 24136365  T
Q  228 gtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    |||||||||| |||| |||||| ||||||||||||| | |||||| |||||||||| ||||| |||||||||||||||  ||||||||||||||||||||    
T  24136366 gtcacgatttggcaccctgcaaactagctcacggcatcacgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtgttcttccagaccacaaat 24136465  T
Q  327 ttgaa 331  Q
    |||||    
T  24136466 ttgaa 24136470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 106 - 344
Target Start/End: Original strand, 43599079 - 43599318
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    ||||||||||| ||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  43599079 caatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 43599177  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcaccc--gaaatcgtgtcacgataccaaaatcgtgtcacgattt 303  Q
    ||||||||||| || | |||||| |||||||| ||   |||||| |||||||||||| |||  |||||||||||||||  ||||||||||||||||||||    
T  43599178 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgattt 43599277  T
Q  304 ccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  43599278 ctctgttcttccagaccacaaatttgaagccaatatcaaca 43599318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 106 - 344
Target Start/End: Original strand, 43604571 - 43604810
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    ||||||||||| ||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  43604571 caatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 43604669  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcaccc--gaaatcgtgtcacgataccaaaatcgtgtcacgattt 303  Q
    ||||||||||| || | |||||| |||||||| ||   |||||| |||||||||||| |||  |||||||||||||||  ||||||||||||||||||||    
T  43604670 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgattt 43604769  T
Q  304 ccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  43604770 ctctgttcttccagaccacaaatttgaagccaatatcaaca 43604810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 106 - 344
Target Start/End: Original strand, 43610063 - 43610302
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    ||||||||||| ||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  43610063 caatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 43610161  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcaccc--gaaatcgtgtcacgataccaaaatcgtgtcacgattt 303  Q
    ||||||||||| || | |||||| |||||||| ||   |||||| |||||||||||| |||  |||||||||||||||  ||||||||||||||||||||    
T  43610162 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgattt 43610261  T
Q  304 ccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    | ||||||||||||||||||||||||||| |||| ||||||    
T  43610262 ctctgttcttccagaccacaaatttgaagccaatatcaaca 43610302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 106 - 344
Target Start/End: Original strand, 27450171 - 27450409
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    |||||||| || ||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  27450171 caatcgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 27450269  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | |||||| |||||||| ||   |||||| |||||||||||| ||  |||||||||||||||| |||||||||||||||||||||    
T  27450270 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 27450369  T
Q  305 cctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
     ||||||||||||||||||||||||||| |||| ||||||    
T  27450370 tctgttcttccagaccacaaatttgaagccaatatcaaca 27450409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 61 - 336
Target Start/End: Original strand, 18441945 - 18442224
Alignment:
Q  61 ccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtcccaa 155  Q
    ||||||||||||||||||||||| |||| |||||| | ||   || |  |||||||||| ||||| ||   |||||||||||||  ||||| ||||||||    
T  18441945 ccttcaaatctgcacaagaacacttaaa-tactagccctccactgataaaatcgtgtcacgattt-ccaggtcgtgtcacgattggtgcgttcgtcccaa 18442042  T
Q  156 ggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagc 255  Q
    | |||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  |||||||||||||||| |||| |||||| | |||    
T  18442043 gaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagc 18442142  T
Q  256 tcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 336  Q
    |||||||| |  |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18442143 tcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 18442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 61 - 336
Target Start/End: Original strand, 9789521 - 9789800
Alignment:
Q  61 ccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtcccaa 155  Q
    ||||||||||||||||||||||| |||| |||||| | ||   || |  |||||||||| |||||||    ||||||||||| |  ||||| |||| |||    
T  9789521 ccttcaaatctgcacaagaacacttaaa-tactagccctccactgataaaatcgtgtcacgattttcagg-tcgtgtcacgaatggtgcgttcgtcgcaa 9789618  T
Q  156 ggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagc 255  Q
    | |||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  |||||||||||||||| |||| |||||| | |||    
T  9789619 gaaacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagc 9789718  T
Q  256 tcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 336  Q
    |||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9789719 tcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 9789800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 161 - 380
Target Start/End: Complemental strand, 28807260 - 28807040
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| | ||||||||  |||||||||||||||| || | |||||| ||||||||||||| |||||| || | |||||    
T  28807260 gaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcac 28807161  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgac 359  Q
    |||| |  | |||||||||||||  |||||||||| ||||||| | |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  28807160 ggcatctcagatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaattccaacatttctccaccttgac 28807061  T
Q  360 ttctaatttggtgatgatgtc 380  Q
    ||||||||||||| |||||||    
T  28807060 ttctaatttggtggtgatgtc 28807040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 30631764 - 30631948
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||||||||||||||  |||||||||||||||||||||   ||||||||||||||| || ||||||||||||||||| ||   |||||| || |||||||    
T  30631764 gaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcacg 30631863  T
Q  261 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  30631864 gcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30631948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 127 - 380
Target Start/End: Complemental strand, 16409298 - 16409041
Alignment:
Q  127 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    ||||||||||||||| |  ||| |||||||| | ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||   | | ||    
T  16409298 aatcgtgtcacgattggagcgtacgtcccaatgtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagat 16409199  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
    |||||||| |||| ||||  ||||| | |||||||| || | | ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||    
T  16409198 cgtgtcacaatttggcaccttgcaaaccagctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccaca 16409099  T
Q  324 aatttgaagac-aatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||    
T  16409098 aatttgaagccaaatctcaacatttctccaccttgacttctaatttggtggtgatgtc 16409041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 129 - 332
Target Start/End: Complemental strand, 26170576 - 26170370
Alignment:
Q  129 tcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcg 226  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||  ||||||||||| ||   ||||    
T  26170576 tcgtgtcacgattggtgcgtccgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcg 26170477  T
Q  227 tgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    ||||||||||| |||| |||||| | ||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||    
T  26170476 tgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaa 26170377  T
Q  326 tttgaag 332  Q
    |||||||    
T  26170376 tttgaag 26170370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 106 - 336
Target Start/End: Original strand, 29751505 - 29751715
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    ||||||||||| |||||||| |||||||||||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||||         
T  29751505 caatcgtgtcacgattttccaaatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcac----- 29751599  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
                    |||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||  ||| ||||| || ||||||||||||    
T  29751600 ----------------aatcgtgtcacgatttggcaccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttc 29751683  T
Q  305 cctgttcttccagaccacaaatttgaagacaa 336  Q
    ||||||||||||||||||||||||||||||||    
T  29751684 cctgttcttccagaccacaaatttgaagacaa 29751715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 106 - 380
Target Start/End: Original strand, 43592634 - 43592890
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    ||||||||||| ||||| || ||||||||||||||||||||| | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||    
T  43592634 caatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcg 43592732  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcaccc--gaaatcgtgtcacgataccaaaatcgtgtcacgattt 303  Q
    ||||||||||| || | |||||| |||||||| ||   |||||| |||||||||||| |||  |||||||||                   |||||||||    
T  43592733 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtg-------------------tcacgattt 43592813  T
Q  304 ccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  43592814 ctctgttcttccagaccacaaatttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgatgtc 43592890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 130 - 345
Target Start/End: Complemental strand, 1456852 - 1456637
Alignment:
Q  130 cgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgt 229  Q
    ||||||||||||||| || | ||||||| | ||| ||||||||||| ||||||||||| ||||||||||   ||||||||||||||| || | ||||||     
T  1456852 cgtgtcacgatttgcatctgacccaaggta-gacaagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgc 1456754  T
Q  230 cacgattttgcactctgcaacctagctcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 328  Q
    |||||||| ||   ||| || |||||||||||| ||  |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  1456753 cacgatttggcgtcctgtaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaattt 1456654  T
Q  329 gaagacaatttcaacat 345  Q
    |||| |||| |||||||    
T  1456653 gaagccaatatcaacat 1456637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 127 - 332
Target Start/End: Complemental strand, 16407862 - 16407654
Alignment:
Q  127 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    ||||||||||||||| |  ||| |||||||||| |||||| |||||||||| ||| |||||||||||||||||    ||||||||||||||   | | ||    
T  16407862 aatcgtgtcacgattggagcgtacgtcccaaggtacgaccggtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagat 16407763  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
    ||||||||||||| |||| |||||| | ||||||||||| | | |||||||||||||||  |||| ||||||||||||||| ||||||||||||||||||    
T  16407762 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccaca 16407663  T
Q  324 aatttgaag 332  Q
    |||||||||    
T  16407662 aatttgaag 16407654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 162 - 380
Target Start/End: Complemental strand, 37561130 - 37560911
Alignment:
Q  162 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcacg 260  Q
    ||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| || | |||||| ||||||||  | |  |  || || | ||||||    
T  37561130 accagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37561031  T
Q  261 gcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgact 360  Q
    ||| |  | |||||||||||||    |||||||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  37561030 gcatctcagatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaattcaacatttctccaccttgact 37560931  T
Q  361 tctaatttggtgatgatgtc 380  Q
    |||||||||||| |||||||    
T  37560930 tctaatttggtggtgatgtc 37560911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 15045096 - 15045279
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||||||||||||||  ||||||||| |||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| || |||||||    
T  15045096 gaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacg 15045195  T
Q  261 gcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||| |  ||||||||||||||| ||||||||||||||||||||| ||||||||||| || |||||||||||| |||| ||||||    
T  15045196 gcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaatatcaaca 15045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 29752266 - 29752381
Alignment:
Q  222 aatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagacc 320  Q
    ||||||| |||||||| |||| |||||||||||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  29752266 aatcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 29752365  T
Q  321 acaaatttgaagacaa 336  Q
    ||||||||||||||||    
T  29752366 acaaatttgaagacaa 29752381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 167 - 344
Target Start/End: Complemental strand, 29402728 - 29402550
Alignment:
Q  167 tccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggc-acc 265  Q
    |||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| |||||||| ||| ||     
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccact 29402629  T
Q  266 cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
     ||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  29402628 tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 29402550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 380
Target Start/End: Original strand, 33768587 - 33768808
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | |||| || | |||||    
T  33768587 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33768686  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt-caacatttctccaccttga 358  Q
    |||| |    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||    
T  33768687 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatttctccaccttga 33768786  T
Q  359 cttctaatttggtgatgatgtc 380  Q
    |||||||||||||| |||||||    
T  33768787 cttctaatttggtggtgatgtc 33768808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 221 - 332
Target Start/End: Original strand, 15465000 - 15465112
Alignment:
Q  221 aaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 319  Q
    ||||||||||||||||| |||| |||||| | ||||||||||| | | ||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  15465000 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagac 15465099  T
Q  320 cacaaatttgaag 332  Q
    |||||||||||||    
T  15465100 cacaaatttgaag 15465112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 301 - 380
Target Start/End: Original strand, 43625605 - 43625684
Alignment:
Q  301 tttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgatgtc 43625684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 380
Target Start/End: Complemental strand, 31401531 - 31401310
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacct-agctcac 259  Q
    |||||||||||||||  || ||||||  ||||||||||   ||| ||||||||||| || | |||||| |||||||||||   | |||| || |||||||    
T  31401531 gaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcac 31401432  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt-caacatttctccaccttga 358  Q
     ||  |    |||||||||||||  | |||||||| ||||||| | || |||| ||| ||||||||||||||| |||||| |||||||||||||||||||    
T  31401431 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaattttcaacatttctccaccttga 31401332  T
Q  359 cttctaatttggtgatgatgtc 380  Q
    |||||||||||||| |||||||    
T  31401331 cttctaatttggtggtgatgtc 31401310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 332
Target Start/End: Complemental strand, 36931968 - 36931856
Alignment:
Q  221 aaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 319  Q
    ||||||||||||||||| |||| |||||| | |||||||| || | | |||||||| |||||| ||||| ||||||||||||||| ||||||||||| ||    
T  36931968 aaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaac 36931869  T
Q  320 cacaaatttgaag 332  Q
    |||||||||||||    
T  36931868 cacaaatttgaag 36931856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 162 - 344
Target Start/End: Complemental strand, 37556308 - 37556125
Alignment:
Q  162 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcacg 260  Q
    ||||||||||||||  |||||||||| ||||||||||  ||||||||||| |||| || | |||||| ||||||||  | |  |  || || | ||||||    
T  37556308 accagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37556209  T
Q  261 gcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||| |  | |||||||||||||  | |||||||||||||||| | ||||||||||||||||||||||||||| ||| |||||||    
T  37556208 gcatctcagatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaattcaaca 37556125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 349
Target Start/End: Original strand, 33791719 - 33791909
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | || ||| | ||||||    
T  33791719 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33791818  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa-tttcaacatttct 349  Q
    |||| |    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| |||||||||||||    
T  33791819 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatttct 33791909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 35388016 - 35388169
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||| ||||   || |  |||||||||| ||||| ||  ||||||||||||||||  ||| |||||||||| |     
T  35388016 aaatctgcacaagaacacttaaa-tactagccttcctctgataaaatcgtgtcacgattt-ccagatcgtgtcacgatttgaacgtacgtcccaaggtat 35388113  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 216  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||    
T  35388114 gaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 121 - 263
Target Start/End: Original strand, 38219803 - 38219947
Alignment:
Q  121 tttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttc 218  Q
    ||||| ||||||||||||||| |  ||| |||| ||||| ||||||||||||||||| ||| ||||||| ||||||||| |  |||||||||| |||| |    
T  38219803 tttccaaatcgtgtcacgattggaacgtacgtcacaaggtacgaccagtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcc 38219902  T
Q  219 ccaaatcgtgtcacgattttgcactctgcaacctagctcacggca 263  Q
    | | ||||||||||||||| |||| || ||| | |||||||||||    
T  38219903 caagatcgtgtcacgatttggcaccctacaaaccagctcacggca 38219947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 332
Target Start/End: Complemental strand, 9352972 - 9352820
Alignment:
Q  181 acttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcac 279  Q
    ||||||| ||||||||| |  |||||||||||||||  |  ||||||| ||||||||  ||| |||||| | |||||||||||   | ||||||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcac 9352873  T
Q  280 gataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||| ||| ||||| ||||||||||| |||||||| || |||||||||||||||    
T  9352872 gatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaag 9352820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 339
Target Start/End: Original strand, 2785778 - 2785957
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | || ||| | ||||||    
T  2785778 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 2785877  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    |||| |    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||||    
T  2785878 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattt 2785957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 282
Target Start/End: Original strand, 31180637 - 31180787
Alignment:
Q  132 tgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtca 231  Q
    |||||||||||||||| | |||||||   |||||||||||||||  ||||||||||||| |||| ||   ||||||||||||||| || | |||||| ||    
T  31180637 tgtcacgatttgcgtctgacccaaggtt-gaccagtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgcca 31180735  T
Q  232 cgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgat 282  Q
    |||||| ||   |||||| |||||||||| ||||  ||||||||||||||||    
T  31180736 cgatttggcgtcctgcaaactagctcacgacaccttgaaatcgtgtcacgat 31180787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 31180773 - 31180831
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacat 31180831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 14520796 - 14520848
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 14520848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 28832772 - 28832816
Alignment:
Q  323 aaatttgaagacaatttcaacatttctccaccttgacttctaatt 367  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  28832772 aaatttgaagtcaatttcaacatttctccaccttgacttctaatt 28832816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 339
Target Start/End: Complemental strand, 31396674 - 31396495
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacct-agctcac 259  Q
    |||||||||||||||  || ||||||| | ||||| ||   ||||||||||||||| || | |||||| |||||||||||   | |||| || |||||||    
T  31396674 gaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctcac 31396575  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
     ||  |    |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||||    
T  31396574 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattt 31396495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 332
Target Start/End: Original strand, 35388196 - 35388233
Alignment:
Q  295 tcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||||||||| |||||||||||||||||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaag 35388233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 12083708 - 12083658
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| |||| |||||| ||| ||||    
T  12083708 aaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaat 12083658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 11916502 - 11916457
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||| ||||||||||||| |||||||| || |||||||||||||||    
T  11916502 aaattgtgtcacgatttctctgttctttcaaaccacaaatttgaag 11916457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 62 - 378
Target Start/End: Original strand, 6592636 - 6592955
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6592636 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 6592734  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgca-ctctgcaa-cctagct 256  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||| | |||||| |||||||    
T  6592735 acgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga-tttgcacccctgcaaccctagct 6592833  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacctt 356  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6592834 cacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacatttctccacctt 6592933  T
Q  357 gacttctaatttggtgatgatg 378  Q
    ||||||||||||||||||||||    
T  6592934 gacttctaatttggtgatgatg 6592955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 65 - 344
Target Start/End: Original strand, 18392498 - 18392780
Alignment:
Q  65 caaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 161  Q
    ||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18392498 caaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 18392596  T
Q  162 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaa-cctagctcacg 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  18392597 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaaccctagctcacg 18392696  T
Q  261 gcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||   |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  18392697 gcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 62 - 344
Target Start/End: Original strand, 6594852 - 6595137
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6594852 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 6594950  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgca-ctctgcaa-cctagct 256  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||| | |||||| |||||||    
T  6594951 acgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga-tttgcacccctgcaaccctagct 6595049  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  6595050 cacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagacaatctcaaca 6595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 125 - 344
Target Start/End: Original strand, 32060668 - 32060888
Alignment:
Q  125 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  32060668 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaat 32060767  T
Q  225 cgtgtcacgattttgca-ctctgcaa-cctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccac 322  Q
    |||| ||||| |||||| | |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32060768 cgtgccacga-tttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccac 32060866  T
Q  323 aaatttgaagacaatttcaaca 344  Q
    ||||||||||||||| ||||||    
T  32060867 aaatttgaagacaatctcaaca 32060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 50 - 344
Target Start/End: Original strand, 1562290 - 1562587
Alignment:
Q  50 tccaactctccccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgt 146  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||    
T  1562290 tccaactctctccttcaaatctgcacaagaacacataaa-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgt 1562388  T
Q  147 ccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactc-t 245  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||   || |      
T  1562389 ccgtcacaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgatttaaaacccaa 1562488  T
Q  246 gcaacctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
      |||  |    | |  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1562489 aaaacaaaaaaaaagaaacacgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 126 - 380
Target Start/End: Original strand, 21640204 - 21640459
Alignment:
Q  126 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatc 225  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||  ||||||||| |||||||||||   ||||||||||||||| || | |||    
T  21640204 caatcgtgtcacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 21640303  T
Q  226 gtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaa 324  Q
    |||||||||||| ||   |||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  21640304 gtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaa 21640403  T
Q  325 atttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  21640404 atttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgatgtc 21640459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 127 - 344
Target Start/End: Complemental strand, 20343718 - 20343500
Alignment:
Q  127 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcg 226  Q
    |||||||||||||| ||||| |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||    
T  20343718 aatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcg 20343619  T
Q  227 tgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    || ||||||||||||  | |||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  20343618 tgacacgattttgcatccggcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaa 20343519  T
Q  326 tttgaagacaatttcaaca 344  Q
    |||||||||||| ||||||    
T  20343518 tttgaagacaatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 65 - 247
Target Start/End: Original strand, 18389062 - 18389246
Alignment:
Q  65 caaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 161  Q
    ||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18389062 caaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 18389160  T
Q  162 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  18389161 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgc 18389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 106 - 336
Target Start/End: Complemental strand, 24789665 - 24789435
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    ||||||||||| ||||| || |||||||||| ||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||    
T  24789665 caatcgtgtcacgattt-ccaaatcgtgtcaagatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcg 24789567  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | |||||| |||||||| |||| |||||| ||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  24789566 tgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttc 24789467  T
Q  305 cctgttcttccagaccacaaatttgaagacaa 336  Q
    ||||||||||||||||||||||||||||||||    
T  24789466 cctgttcttccagaccacaaatttgaagacaa 24789435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 63 - 344
Target Start/End: Original strand, 2058321 - 2058604
Alignment:
Q  63 ttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaa 159  Q
    ||||||||||||||||||||||  | ||||||| ||||   ||   |||||||| || ||||| ||  ||||||||||||||||||| |  ||||||| |    
T  2058321 ttcaaatctgcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgattt-ccagatcgtgtcacgatttgcgtacaacccaaggta 2058419  T
Q  160 cgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcac 259  Q
     ||||||||||||||||||||||||||||||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| |||||||||    
T  2058420 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 2058519  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||  ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  2058520 ggcacctcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 2058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 66 - 380
Target Start/End: Original strand, 18409116 - 18409435
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaac 160  Q
    |||||||||| ||||||| |||| |||||||||||   || |  |||||||||| ||||| || | ||||||||||||| |  ||| |||| ||||| ||    
T  18409116 aaatctgcacgagaacacttaaa-tactagtcttccactgataaaatcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtac 18409213  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    ||||||||||||||| ||| ||||||| ||||||||| |  |||||||||||||||  | | ||||||||| ||||| |||| |||||| | ||||||||    
T  18409214 gaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacg 18409313  T
Q  261 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaacatttctccaccttga 358  Q
    ||||| | ||||||||||||||| ||||| |||||| |||||||| ||||||||||||| ||||||||||||| | ||| |||||||||||| |||||||    
T  18409314 gcaccacaaaatcgtgtcacgatgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaaatctcaacatttctctaccttga 18409413  T
Q  359 cttctaatttggtgatgatgtc 380  Q
    |||||||||||||| |||||||    
T  18409414 cttctaatttggtggtgatgtc 18409435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 126 - 344
Target Start/End: Complemental strand, 20357247 - 20357028
Alignment:
Q  126 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatc 225  Q
    |||||||| ||||||||||||| | |||||||   |||| |||||||||||||||||||||||||||||||||   ||| ||||||||||| || | |||    
T  20357247 caatcgtgccacgatttgcgtctgacccaaggtttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatc 20357148  T
Q  226 gtgtcacgattttgcactctgcaacctagctcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaa 324  Q
    ||| |||||||| ||   |||||| |||||||||||||||  |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  20357147 gtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaa 20357048  T
Q  325 atttgaagacaatttcaaca 344  Q
    |||||||| |||| ||||||    
T  20357047 atttgaagccaatatcaaca 20357028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 66 - 332
Target Start/End: Original strand, 21646360 - 21646630
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||| ||||   || |  |||||||||| ||||| ||  |||||| |||||||||  ||| |||||||||| |     
T  21646360 aaatctgcacaagaacacttaaa-tactagccttcctctgataaaatcgtgtcacgattt-ccagatcgtggcacgatttgaacgtacgtcccaaggtat 21646457  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    ||||||| ||||||||||||||||||||||||||||| |  |||||||||||||||||| | ||||||||||||||| |||| |||||| | ||||||||    
T  21646458 gaccagttcttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 21646557  T
Q  261 gca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||| | ||||||||||||||||| ||||| | ||||||||||||| ||||||||||| |||||||||||||||    
T  21646558 gcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 127 - 332
Target Start/End: Original strand, 43504500 - 43504708
Alignment:
Q  127 aatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    |||||||||||||||  ||| || ||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||   ||    
T  43504500 aatcgtgtcacgattggtgcatctgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgat 43504599  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
    ||||||||||||| |||| |||||| | ||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  43504600 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccaca 43504699  T
Q  324 aatttgaag 332  Q
    |||||||||    
T  43504700 aatttgaag 43504708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 107 - 380
Target Start/End: Original strand, 12397267 - 12397528
Alignment:
Q  107 aatcgtgtcatgattttcccaa-tcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    ||||||| || ||||| ||||| ||||||||||||||||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   ||||    
T  12397267 aatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcg 12397365  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggc-acccgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | ||| || |             |||||| |||||||||||| ||  |||||||||||||||||||||||||||||| |||||||    
T  12397366 tgtcacgatttcccaagatcatggc-------------ctgcaaactagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttc 12397452  T
Q  305 cctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
     ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  12397453 tctgttcttccagaccacaaatttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgatgtc 12397528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 128 - 332
Target Start/End: Complemental strand, 39731153 - 39730946
Alignment:
Q  128 atcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatc 225  Q
    |||||||||||||| |  ||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||   | | |||    
T  39731153 atcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatc 39731054  T
Q  226 gtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaa 324  Q
    |||||||||||| |||| |||||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  39731053 gtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaa 39730954  T
Q  325 atttgaag 332  Q
    ||||||||    
T  39730953 atttgaag 39730946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 107 - 344
Target Start/End: Original strand, 12406619 - 12406857
Alignment:
Q  107 aatcgtgtcatgattttcccaa-tcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    ||||||| || ||||| ||||| ||||||||||||||||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   ||||    
T  12406619 aatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcg 12406717  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggc-acccgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | |||||| |||||||| ||    ||||| |||||||||||| ||  |||||||||||||||| |||||||||||||||||||||    
T  12406718 tgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 12406817  T
Q  305 cctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
     ||||||||||||||||||||||||||| |||| ||||||    
T  12406818 tctgttcttccagaccacaaatttgaagccaatatcaaca 12406857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 66 - 332
Target Start/End: Original strand, 18413992 - 18414262
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||||||||   || |  ||| |||||| ||||| || | ||||||||||||| |  ||| |||| ||||| ||    
T  18413992 aaatctgcacaagaacacttaaa-tactagtcttccaatgataaaattgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtac 18414089  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    ||||||||||||||| ||| ||||||| ||||||||| |  ||||||| ||||||| || | ||||||||||||||| || | |||||| | ||||||||    
T  18414090 gaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacg 18414189  T
Q  261 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||||| | |||||||| |||||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||    
T  18414190 gcaccacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaag 18414262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 128 - 301
Target Start/End: Complemental strand, 1533121 - 1532947
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    |||||||||||||||| ||  ||||||||| |  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || | |||||    
T  1533121 atcgtgtcacgatttgtgtatgtcccaaggtataaccagtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgt 1533022  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgat 301  Q
    |||||||||| |||| |||||| |||||||| |||||| | ||||| ||||||||| ||||| ||||||||||||    
T  1533021 gtcacgatttggcaccctgcaaactagctcatggcacctcaaaatcatgtcacgatgccaaattcgtgtcacgat 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 128 - 344
Target Start/End: Original strand, 4873505 - 4873721
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    |||||||||||||||||  | | ||||||||| ||| |||||||||||  |||||||||||||||||||||   || |||||||||||| || | |||||    
T  4873505 atcgtgtcacgatttgcaacggacccaaggaa-gacaagtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgt 4873603  T
Q  228 gtcacgattttgcactctgcaacctagctcacggc-acccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||   |||||| ||| || ||||| ||  |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  4873604 gccacgatttggcgtcctgcaaactatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 4873703  T
Q  327 ttgaagacaatttcaaca 344  Q
    |||||| |||| ||||||    
T  4873704 ttgaagccaatatcaaca 4873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 345
Target Start/End: Complemental strand, 21811923 - 21811738
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| || | |||||| ||||||||||||| |||| ||| | ||||||    
T  21811923 gaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctcac 21811824  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    |||| |  | |||||||||||||  |||||||||| ||||||| | ||||||||||||||||||||||||||| ||| | ||||||    
T  21811823 ggcatctcagatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaatacaacat 21811738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 332
Target Start/End: Complemental strand, 48408619 - 48408411
Alignment:
Q  127 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    ||||||||||||||| |  ||| |||  ||||| ||||||||||||||||   || |||||||||||||||||    |||||||||||||||  | | ||    
T  48408619 aatcgtgtcacgattggtacgtacgttacaaggtacgaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaagat 48408520  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
    ||||||||||||| |||| |||||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||    
T  48408519 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccaca 48408420  T
Q  324 aatttgaag 332  Q
    |||||||||    
T  48408419 aatttgaag 48408411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 161 - 380
Target Start/End: Complemental strand, 24265861 - 24265641
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacct-agctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | |||| || |||||||    
T  24265861 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 24265762  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgac 359  Q
     ||  ||   ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| ||||||||| ||||| ||||||||||||||||||||    
T  24265761 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaattccaacatttctccaccttgac 24265662  T
Q  360 ttctaatttggtgatgatgtc 380  Q
    ||||||||||||| |||||||    
T  24265661 ttctaatttggtggtgatgtc 24265641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 66 - 332
Target Start/End: Original strand, 25767263 - 25767527
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||||||||   || |  |||||||||| ||||| || | ||||||||||||| |  ||| |||| ||||| ||    
T  25767263 aaatctgcacaagaacacttaaa-tactagtcttccattgataaaatcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggcac 25767360  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||| |||||||||   || ||||||||||||||||| |  ||||||||||||||| || ||||||||||||||||| |||| |||||| | ||||||||    
T  25767361 gacctgtccttatcctagaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacg 25767460  T
Q  261 gca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||| | ||||||||||||||||| ||||| | |||||||||||||       |||||||||||||||||||||    
T  25767461 gcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttc------tttccagaccacaaatttgaag 25767527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 161 - 345
Target Start/End: Complemental strand, 24024003 - 24023818
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||||||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| ||||||| |     
T  24024003 gaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctctct 24023904  T
Q  261 gc-acccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    || ||  ||||||||| |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||    
T  24023903 gccacttgaaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagctaatatcaacat 24023818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 288 - 378
Target Start/End: Original strand, 18390506 - 18390596
Alignment:
Q  288 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatg 378  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaatctcaacatttctccaccttgacttctaatttggtgatgatg 18390596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 128 - 348
Target Start/End: Complemental strand, 31109287 - 31109066
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||| |||  | | ||||||| | ||| |||||||||||   ||||||||| ||||||||||   ||||||||||||||| || | |||||    
T  31109287 atcgtgtcacgatctgcaacggccccaaggca-gacaagtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgt 31109189  T
Q  228 gtcacgattttgcactctgcaacct-agctcac-ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    | |||||||| ||   |||||| || |||| || |||||  ||||||||| |||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  31109188 gccacgatttggcgtcctgcaaacttagcttacaggcacttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaa 31109089  T
Q  326 tttgaagacaatttcaacatttc 348  Q
    ||||||| |||||||||||||||    
T  31109088 tttgaagccaatttcaacatttc 31109066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 380
Target Start/End: Original strand, 16880476 - 16880696
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  || ||||||| ||||||||||   |||||||||| |||| || | |||||| |||||||||||   | |||| |||| |||||    
T  16880476 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcac 16880575  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgac 359  Q
     ||  ||   |||||||||||||  |||||||||| ||||||| | ||| ||||||| ||||| ||||||||| ||||| ||||||||||||||||||||    
T  16880576 tgcctccctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaattccaacatttctccaccttgac 16880675  T
Q  360 ttctaatttggtgatgatgtc 380  Q
    |||||| |||||| |||||||    
T  16880676 ttctaaattggtggtgatgtc 16880696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 268 - 367
Target Start/End: Original strand, 21983790 - 21983890
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa-tttcaacatttctccaccttgacttctaat 366  Q
    |||||||||||||||    |||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  21983790 aaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacatttctccaccttgacttctaat 21983889  T
Q  367 t 367  Q
    |    
T  21983890 t 21983890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 2479795 - 2479960
Alignment:
Q  181 acttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacccgaaa-tcgtgtcac 279  Q
    ||||||| | ||||||| |  ||||||| |||||||  | |||||||| ||||||||  ||| |||||| | |||||||||||   |||| |||||||||    
T  2479795 acttaaccaacaagtttgaaaatcgtgtaacgatttcacaaaatcgtgacacgatttgacaccctgcaaaccagctcacggcattagaaaatcgtgtcac 2479894  T
Q  280 gataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaaca 344  Q
    ||| ||||||||||||||| ||||| |||||||| || ||||||||||||||| | ||||||||||    
T  2479895 gatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaaatttcaaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 47264190 - 47264267
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaaca 344  Q
    ||||||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||| | ||||||||||    
T  47264190 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 24261005 - 24260821
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctg-caacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | ||||||||||||||||||  || |   || | ||||||    
T  24261005 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagattacttggctcac 24260906  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
     ||  ||   |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||| |||||    
T  24260905 tgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattccaaca 24260821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 347
Target Start/End: Original strand, 16885331 - 16885518
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  || ||||||| ||||||||||   |||||||||| |||| || | |||||| |||||||||||   | |||| |||| |||||    
T  16885331 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctcac 16885430  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacattt 347  Q
     ||  ||   |||||||||||||  |||||||||| ||||||| | ||| ||||||| ||||| ||||||||| ||||| ||||||||    
T  16885431 tgcctccctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaagtcaattccaacattt 16885518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 344
Target Start/End: Complemental strand, 44847696 - 44847619
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaaca 344  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||  | ||||||||||||||| | ||||||||||    
T  44847696 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttcaaca 44847619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 1532945 - 1532897
Alignment:
Q  284 ccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  1532945 ccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1532897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 9189520 - 9189464
Alignment:
Q  323 aaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  9189520 aaatttgaagtcaattacaacatttctccaccttgacttctaa-ttgatgatgatgtc 9189464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 21989454 - 21989531
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa-tttcaaca 344  Q
    |||||||||||||||    ||||| |||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||    
T  21989454 aaatcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaactttcaaca 21989531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 340 - 380
Target Start/End: Original strand, 20000330 - 20000370
Alignment:
Q  340 caacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  20000330 caacatttctccaccttgacttctaatttggtggtgatgtc 20000370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 79955 - 80005
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||| ||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaat 80005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 4509335 - 4509369
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatt 302  Q
    ||||||||||||||| |||||||||||||||||||    
T  4509335 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4509369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 4511177 - 4511211
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatt 302  Q
    ||||||||||||||| |||||||||||||||||||    
T  4511177 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 6431501 - 6431467
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatt 302  Q
    ||||||||||||||| |||||||||||||||||||    
T  6431501 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 6431467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 49092237 - 49092282
Alignment:
Q  286 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 331  Q
    ||||||||||||| ||||| ||||||||||| || |||||||||||    
T  49092237 aaaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 46515860 - 46515808
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttcc-agaccacaaatttgaagacaatt 338  Q
    |||||||||||||||||| |||||||||| | |||| |||||||||| |||||    
T  46515860 aaatcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaatt 46515808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 10067201 - 10066881
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  10067201 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaagga 10067103  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaatcgtgtcacgattttgca-ctctgcaa-cctagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| |||||| | |||||| |||| |    
T  10067102 acgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcacccctgcaaccctaac 10067004  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacct 355  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  10067003 tcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaacatttctccacct 10066904  T
Q  356 tgacttctaatttggtgatgatg 378  Q
    |||||||||||||||||||||||    
T  10066903 tgacttctaatttggtgatgatg 10066881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 10058313 - 10057993
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  10058313 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaagga 10058215  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa-tcgtgtcacgattttgcactc-tgcaacc-tagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||| | ||||||| || |    
T  10058214 acgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaac 10058116  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacct 355  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  10058115 tcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaacatttctccacct 10058016  T
Q  356 tgacttctaatttggtgatgatg 378  Q
    |||||||||||||||||||||||    
T  10058015 tgacttctaatttggtgatgatg 10057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 10060535 - 10060215
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  10060535 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaagga 10060437  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa-tcgtgtcacgattttgcactc-tgcaacc-tagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||| | ||||||| || |    
T  10060436 acgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaac 10060338  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacct 355  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  10060337 tcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaacatttctccacct 10060238  T
Q  356 tgacttctaatttggtgatgatg 378  Q
    |||||||||||||||||||||||    
T  10060237 tgacttctaatttggtgatgatg 10060215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 10062757 - 10062437
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  10062757 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaagga 10062659  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa-tcgtgtcacgattttgcactc-tgcaacc-tagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||| | ||||||| || |    
T  10062658 acgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaac 10062560  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacct 355  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  10062559 tcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaacatttctccacct 10062460  T
Q  356 tgacttctaatttggtgatgatg 378  Q
    |||||||||||||||||||||||    
T  10062459 tgacttctaatttggtgatgatg 10062437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 10064979 - 10064659
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  10064979 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaagga 10064881  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa-tcgtgtcacgattttgcactc-tgcaacc-tagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||| | ||||||| || |    
T  10064880 acgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaac 10064782  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacct 355  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  10064781 tcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaacatttctccacct 10064682  T
Q  356 tgacttctaatttggtgatgatg 378  Q
    |||||||||||||||||||||||    
T  10064681 tgacttctaatttggtgatgatg 10064659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 50 - 378
Target Start/End: Original strand, 4598808 - 4599141
Alignment:
Q  50 tccaactctcccctt-caaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcg 145  Q
    |||||||||| |||| ||||||||||||||||||| |||  |||||||||||   |||| ||||||||||| ||||||||||||||||||||||||||||    
T  4598808 tccaactctctcctttcaaatctgcacaagaacacttaag-tactagtcttcctctgtttcaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 4598906  T
Q  146 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaatcgtgtcacgattttgcactc 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||| |||||||| |||| |    
T  4598907 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgattt-gcaccc 4599005  T
Q  245 -tgcaacc-tagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaa 342  Q
     ||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  4599006 ctgcaaccctagctcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaa 4599105  T
Q  343 catttctccaccttgacttctaatttggtgatgatg 378  Q
    ||||||||||||||||||||||||||||||||||||    
T  4599106 catttctccaccttgacttctaatttggtgatgatg 4599141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 10211264 - 10210944
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10211264 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 10211166  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaatcgtgtcacgattttgca-ctctgcaa-cctagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||| ||||| |||||| | |||||| |||| |    
T  10211165 acgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacga-tttgcacccctgcaaccctaac 10211067  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacct 355  Q
    |||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  10211066 tcacggcatcctaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaatctcaacatttctccacct 10210967  T
Q  356 tgacttctaatttggtgatgatg 378  Q
    |||||||||||||||||||||||    
T  10210966 tgacttctaatttggtgatgatg 10210944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 62 - 345
Target Start/End: Complemental strand, 3617319 - 3617033
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3617319 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 3617221  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgca-ctctgcaa-cctagct 256  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||| |||||||    
T  3617220 acgaccagccgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacga-tttgcacccctgcaaccctagct 3617122  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3617121 cacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacat 3617033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 62 - 336
Target Start/End: Complemental strand, 10056091 - 10055813
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  10056091 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaagga 10055993  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaatcgtgtcacgattttgca-ctctgcaa-cctagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||| |||||| | |||||| |||| |    
T  10055992 acgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacga-tttgcacccctgcaaccctaac 10055894  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 336  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10055893 tcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaa 10055813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 63 - 344
Target Start/End: Original strand, 4601043 - 4601328
Alignment:
Q  63 ttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaa 159  Q
    ||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4601043 ttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaa 4601141  T
Q  160 cgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcc-caaatcgtgtcacgattttgca-ctctgcaa-cctagct 256  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||| ||||| |||||| | |||||| |||||||    
T  4601142 cgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacga-tttgcacccctgcaaccctagct 4601240  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  4601241 cacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 62 - 344
Target Start/End: Complemental strand, 6716369 - 6716085
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| | |  |||||||||||   ||||  |||||||||| |||||||| ||||||||||||||  |||| |  |||||| |    
T  6716369 cttcaaatctgcacaagaacacttta--tactagtcttcctctgttgaaatcgtgtcacgattttccaaatcgtgtcacgatccgcgtaccacccaagaa 6716272  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctca 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||| |||||||||||||||    
T  6716271 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctca 6716172  T
Q  259 cggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  6716171 cggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaatctcaaca 6716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 57 - 344
Target Start/End: Complemental strand, 25637303 - 25637013
Alignment:
Q  57 ctccccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtccc 153  Q
    |||| |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25637303 ctcctcttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtccc 25637205  T
Q  154 aaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactc-tgcaacc- 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||| |||| | |||||||     
T  25637204 aaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccc 25637106  T
Q  252 tagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||| || |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  25637105 tagctctcg-cacctcgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaagacaatctcaaca 25637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 62 - 350
Target Start/End: Complemental strand, 54634994 - 54634704
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| | |  |||||| ||||   |||| ||||||||||| ||||||||||||||||||| ||||||||| |  |||||| |    
T  54634994 cttcaaatctgcacaagaacacttta--tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcatgatttgcgtaccacccaagaa 54634897  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctca 258  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||| ||||||| |||||||    
T  54634896 aagaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctca 54634797  T
Q  259 cggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctc 350  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  54634796 cggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacacttctc 54634704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 6718553 - 6718254
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| | |  |||||||||||   ||||  |||||||||| |||||| | ||||||||||||||  |||| |  |||||| |    
T  6718553 cttcaaatctgcacaagaacacttta--tactagtcttcctctgttgaaatcgtgtcacgatttttcaaatcgtgtcacgatccgcgtaccacccaagaa 6718456  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctca 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||| |||||||||||||||    
T  6718455 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctca 6718356  T
Q  259 cggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttg 357  Q
    ||||| ||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6718355 cggcaccccgaaatcgtg-------------------tcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacatttctccaccttg 6718275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 125 - 344
Target Start/End: Complemental strand, 10208999 - 10208778
Alignment:
Q  125 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaa 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| |||    
T  10208999 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaa 10208900  T
Q  224 tcgtgtcacgattttgca-ctctgcaa-cctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagacca 321  Q
    ||||| ||||| |||||| | |||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  10208899 tcgtgccacga-tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaacca 10208801  T
Q  322 caaatttgaagacaatttcaaca 344  Q
    |||||||||||||||| ||||||    
T  10208800 caaatttgaagacaatctcaaca 10208778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 62 - 344
Target Start/End: Complemental strand, 45282850 - 45282585
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| | |  |||||| ||||   ||||  |||||||||| ||||||||||||||||||||||| ||||| |  |||||| |    
T  45282850 cttcaaatctgcacaagaacacttta--tactagccttcctctgttgaaatcgtgtcacgattttcccaatcgtgtcacgatctgcgtaccacccaagaa 45282753  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctca 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  45282752 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctca 45282653  T
Q  259 cggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||||                  | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45282652 cggcaccc------------------cgaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 45282585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 65 - 344
Target Start/End: Complemental strand, 40372538 - 40372256
Alignment:
Q  65 caaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 161  Q
    ||||||||||||||||||||  | ||||||||||||   ||    |||||||||| ||||| ||  |||||| |||||||||||||||| || ||| | |    
T  40372538 caaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt-ccagatcgtggcacgatttgcgtccgttcccaggtatg 40372440  T
Q  162 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacgg 261  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| |||||||||||    
T  40372439 accagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgg 40372340  T
Q  262 cacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  40372339 cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 40372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 66 - 380
Target Start/End: Original strand, 23198247 - 23198566
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||||||||   || |  |||||||||| ||||| || ||||||||||||||| |  ||| |||| ||||| ||    
T  23198247 aaatctgcacaagaacacttaaa-tactagtcttccactgataaaatcgtgtcacgattt-ccaaatcgtgtcacgattggtacgtacgtcacaaggtac 23198344  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    ||||||||||||||  ||| |||||||||||||||||    ||||||||||||||   ||||||||||||||||||| |||| |||||| | ||||||||    
T  23198345 gaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacg 23198444  T
Q  261 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaacatttctccaccttga 358  Q
    ||| | | |||||||||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  23198445 gcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacatttctccaccttga 23198544  T
Q  359 cttctaatttggtgatgatgtc 380  Q
    ||||||||||| || |||||||    
T  23198545 cttctaatttgttggtgatgtc 23198566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 106 - 344
Target Start/End: Original strand, 8477764 - 8478002
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    ||||||||||| ||||| ||  ||||||||||||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||| | ||||    
T  8477764 caatcgtgtcacgattt-ccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctcaatcg 8477862  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | |||||| |||||||| |||  | |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||    
T  8477863 tgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacaatttc 8477962  T
Q  305 cctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
     ||||||||||||||||||||||||||| |||| ||||||    
T  8477963 tctgttcttccagaccacaaatttgaagccaatgtcaaca 8478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 107 - 377
Target Start/End: Complemental strand, 22172899 - 22172629
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 206  Q
    ||||||| || ||||| || ||||||||||||||||||  | |  ||||||   |||||||||||||||  ||| |||||||||||||||||   |||||    
T  22172899 aatcgtgccacgatttcccaaatcgtgtcacgatttgcaacggaaccaaggtt-gaccagtccttatcagagatccttaacgagcaagtttctgaatcgt 22172801  T
Q  207 gtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttcc 305  Q
    |||||||||| || | |||||| |||||||| ||   |||||| || |||||||||||| ||||||||||||||||| |||||||||||||||||||||     
T  22172800 gtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttct 22172701  T
Q  306 ctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgat 377  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  22172700 ctgttcttccagaccacaaatttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgat 22172629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 128 - 380
Target Start/End: Complemental strand, 28503535 - 28503283
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    |||||||||||||||||||| | |||||||   ||| ||||||||||| ||||||||||||||||||||||   || |||||||||||| || | |||||    
T  28503535 atcgtgtcacgatttgcgtctgacccaaggtt-gacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgt 28503437  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||   | |||| |||||||||||| ||  |||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  28503436 gccacgatttggcgtccagcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaat 28503337  T
Q  327 ttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  28503336 ttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgatgtc 28503283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 129 - 380
Target Start/End: Original strand, 1306385 - 1306640
Alignment:
Q  129 tcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcg 226  Q
    ||||||||||||| |  ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| |  ||||||||||||||| || | ||||    
T  1306385 tcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcg 1306484  T
Q  227 tgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    ||||||||||| |||| |||||| | |||||||| |||| ||||||||||||||||| ||||| || |||||||||||| |||||||||||||||| |||    
T  1306485 tgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccataaa 1306584  T
Q  326 tttgaagac-aatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||    
T  1306585 tttgaagccaaatctcaacatttctccaccttgacttctaatttggtggtgatgtc 1306640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 65 - 344
Target Start/End: Original strand, 7167600 - 7167882
Alignment:
Q  65 caaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 161  Q
    ||||||||||||||||||||  | ||||||||||||   ||    ||||||| ||||||||||  ||||||||||||||||||||| | ||||||| | |    
T  7167600 caaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccatgattttca-aatcgtgtcacgatttgcgtctgacccaaggtatg 7167698  T
Q  162 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacgg 261  Q
    ||||||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| |||||||||||    
T  7167699 accagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgg 7167798  T
Q  262 cacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||  ||||| |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||    
T  7167799 caccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaatatcaaca 7167882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 130 - 336
Target Start/End: Complemental strand, 800903 - 800694
Alignment:
Q  130 cgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||  ||||| ||||||||| |||||||| ||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  ||||||    
T  800903 cgtgtcacgattggtgcgttcgtcccaagaaacgaccattccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgt 800804  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    |||||||||| |||| | |||| | ||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  800803 gtcacgatttggcaccccgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaat 800704  T
Q  327 ttgaagacaa 336  Q
    | ||||||||    
T  800703 tcgaagacaa 800694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 121 - 328
Target Start/End: Complemental strand, 27352305 - 27352097
Alignment:
Q  121 tttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc 220  Q
    ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||  |||| ||||||||||||||||   ||||||||||||||| ||     
T  27352305 tttccaaatcgtgtcacgatttgcgtccgtcccaaggtatgaccagtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttccca 27352206  T
Q  221 aaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 319  Q
    | |||||| |||||||| |   ||||||| | |||||||||||||  |||||||||||||||| ||||||||||||||||||||  ||||||||| ||||    
T  27352205 agatcgtgccacgatttggtgttctgcaaacaagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagac 27352106  T
Q  320 cacaaattt 328  Q
    |||||||||    
T  27352105 cacaaattt 27352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 128 - 344
Target Start/End: Complemental strand, 28501368 - 28501152
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||| |||||||||| | |||||||   ||| ||||||||||| ||||||||||||||||||||||   |||||||||||||||||| | |||||    
T  28501368 atcgtgtcatgatttgcgtctgacccaaggtt-gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgt 28501270  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| |    |||||| |||||||||||| ||  |||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  28501269 gccacgatttggtgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaat 28501170  T
Q  327 ttgaagacaatttcaaca 344  Q
    |||||| |||| ||||||    
T  28501169 ttgaagccaatatcaaca 28501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 107 - 332
Target Start/End: Original strand, 23200489 - 23200716
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 204  Q
    |||||||||| ||||| || ||||||||||||||| |  |||  ||| ||||| ||||||||||||||||  ||| |||||||||||||||||    |||    
T  23200489 aatcgtgtcacgattt-ccaaatcgtgtcacgattggtacgtaagtcacaaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatc 23200587  T
Q  205 gtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgattt 303  Q
    |||||||||||   ||||||||||||||||||| |||| |||||| | ||||||| ||| | | ||||||||||||||| ||||| ||||||||||||||    
T  23200588 gtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgattt 23200687  T
Q  304 ccctgttcttccagaccacaaatttgaag 332  Q
    | |||||||||||||||||||||||||||    
T  23200688 ctctgttcttccagaccacaaatttgaag 23200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 127 - 298
Target Start/End: Complemental strand, 2671283 - 2671111
Alignment:
Q  127 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcg 226  Q
    |||||||||||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||   ||||||||||||||| || | ||||    
T  2671283 aatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcg 2671184  T
Q  227 tgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcac 298  Q
    || |||||||| |||  |||||| |||||||||||||||  |||||| ||||||||| |||||||||||||||    
T  2671183 tgccacgatttggcatcctgcaaactagctcacggcaccttgaaatcatgtcacgatgccaaaatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 18656844 - 18657029
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagct-cac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | ||||||||||||||| ||   |||||| || ||| |||    
T  18656844 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcac 18656943  T
Q  260 ggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||| |||||||| |||||||||||||||||| |||| ||||||    
T  18656944 ggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 18657029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 380
Target Start/End: Original strand, 32475887 - 32476108
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | ||||||||||||||||||  || |  ||| | ||||||    
T  32475887 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcac 32475986  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat-ttcaacatttctccaccttga 358  Q
     ||  ||   |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| |||| |||||||||||||||||||||    
T  32475987 tgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatcttcaacatttctccaccttga 32476086  T
Q  359 cttctaatttggtgatgatgtc 380  Q
    |||||||||||||| |||||||    
T  32476087 cttctaatttggtggtgatgtc 32476108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 161 - 380
Target Start/End: Original strand, 8512643 - 8512863
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacct-agctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | |||| || |||||||    
T  8512643 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 8512742  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgac 359  Q
     ||  ||   ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| ||||||||| ||||| ||||||||||||||||||||    
T  8512743 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaattccaacatttctccaccttgac 8512842  T
Q  360 ttctaatttggtgatgatgtc 380  Q
    ||||||||||||| |||||||    
T  8512843 ttctaatttggtggtgatgtc 8512863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 161 - 380
Target Start/End: Complemental strand, 2676759 - 2676538
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  ||| |||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | |||| || | ||| |    
T  2676759 gaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctccc 2676660  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaacatttctccaccttga 358  Q
    | || |    |||||||||||||  |||||||||| ||||||| | ||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  2676659 gacatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaattccaacatttctccaccttga 2676560  T
Q  359 cttctaatttggtgatgatgtc 380  Q
    |||||||||||||| |||||||    
T  2676559 cttctaatttggtggtgatgtc 2676538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 132 - 282
Target Start/End: Complemental strand, 8738736 - 8738585
Alignment:
Q  132 tgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtca 231  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||   ||||||||||||||| || | |||||| ||    
T  8738736 tgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcca 8738637  T
Q  232 cgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgat 282  Q
    |||||| ||   |||||| |||||||||||||||  |||||| |||||||||    
T  8738636 cgatttagcgtcctgcaaactagctcacggcaccttgaaatcatgtcacgat 8738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 132 - 282
Target Start/End: Complemental strand, 9090974 - 9090823
Alignment:
Q  132 tgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtca 231  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||   ||||||||||||||| || | |||||| ||    
T  9090974 tgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcca 9090875  T
Q  232 cgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgat 282  Q
    |||||| ||   |||||| |||||||||||||||  |||||| |||||||||    
T  9090874 cgatttagcgtcctgcaaactagctcacggcaccttgaaatcatgtcacgat 9090823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 127 - 332
Target Start/End: Complemental strand, 26928301 - 26928093
Alignment:
Q  127 aatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    |||||||||||||||  | |||  ||| ||||| |||||| |||||||||  | | ||||||||||||||||| |  ||||||||||||||   | | ||    
T  26928301 aatcgtgtcacgattgatacgtaagtcacaaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagat 26928202  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
     |||||||||||| |||| |||||| | |||||||||||   | ||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  26928201 tgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccaca 26928102  T
Q  324 aatttgaag 332  Q
    |||||||||    
T  26928101 aatttgaag 26928093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 181 - 367
Target Start/End: Complemental strand, 37408200 - 37408013
Alignment:
Q  181 acttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcac 279  Q
    ||||||| | ||||||| |  ||||||||||||||| | ||| ||||| ||||||||  ||| |||||| | ||||||||||||  | ||||||||||||    
T  37408200 acttaaccaacaagtttgaaaatcgtgtcacgatttacacaa-tcgtgccacgatttgacaccctgcaaaccagctcacggcactacaaaatcgtgtcac 37408102  T
Q  280 gataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaacatttctccaccttgacttctaatt 367  Q
    ||| ||| |||||||||||||||||  |||||||||| ||||||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  37408101 gatgccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaatctcaacatttctccaccttgacttcaaatt 37408013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 220 - 332
Target Start/End: Original strand, 7782586 - 7782699
Alignment:
Q  220 caaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccaga 318  Q
    |||||||||||||||||| |||| |||||| | ||||||| ||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||    
T  7782586 caaatcgtgtcacgatttggcaccctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctaga 7782685  T
Q  319 ccacaaatttgaag 332  Q
    ||||||||||||||    
T  7782686 ccacaaatttgaag 7782699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 181 - 332
Target Start/End: Complemental strand, 33386302 - 33386150
Alignment:
Q  181 acttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcac 279  Q
    ||||||| ||||||||| |  ||||||||||||||   | ||||||||||||||||| |||| |||||| | ||||||||||| | | ||||||||||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 33386203  T
Q  280 gataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||| ||||| ||||||||||||||| |||||||| | ||||||||||||||||    
T  33386202 gatgccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaag 33386150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 332
Target Start/End: Original strand, 37726134 - 37726286
Alignment:
Q  181 acttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcac 279  Q
    ||||||| | ||||||| |  ||||||||||||||   | |||||||||||||||||  ||| |||||| | ||||||||||| | | ||||||||||||    
T  37726134 acttaaccaacaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 37726233  T
Q  280 gataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||| |||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  37726234 gatatcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 37726286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 282
Target Start/End: Original strand, 32143664 - 32143884
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| ||| |||||||   || |  |||||||||| ||||| || |||||||||||||||  | ||| |||| ||||| ||    
T  32143664 aaatctgcacaagaacacttaaa-tacaagtcttcaactgataaaatcgtgtcacgattt-ccaaatcgtgtcacgattgatacgtacgtcacaaggtac 32143761  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||| |||||||||  | | ||||||||||||||||| |  ||||||||||||||   | | ||||||||||||||| |||| |||||| ||||||||||    
T  32143762 gacctgtccttatcttgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacg 32143861  T
Q  261 gca-cccgaaatcgtgtcacgat 282  Q
    ||| | | |||||||||||||||    
T  32143862 gcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 332
Target Start/End: Complemental strand, 2672603 - 2672431
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | |||| || | ||| |    
T  2672603 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctccc 2672504  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||| |    |||||||||||||  |||||||||| ||||||| | |||||||||||||||||||||||||||    
T  2672503 ggcatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaag 2672431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 121 - 332
Target Start/End: Original strand, 27453355 - 27453568
Alignment:
Q  121 tttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttc 218  Q
    ||||| |||||||||||||||  | ||| |||| ||||| |||||||  |||||||  | | ||||||| ||||||||| |  ||||||||||||||       
T  27453355 tttccaaatcgtgtcacgattgatacgtacgtcacaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattcca 27453453  T
Q  219 ccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccag 317  Q
    |  |||| ||||||||||| |||| || ||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||| ||||| ||| |||| |||    
T  27453454 cacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgctctttcag 27453553  T
Q  318 accacaaatttgaag 332  Q
    |||||||||||||||    
T  27453554 accacaaatttgaag 27453568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 286 - 380
Target Start/End: Original strand, 36029658 - 36029752
Alignment:
Q  286 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat-ttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| |||| | ||||| ||||||||||| ||||||||||||||| |||||||    
T  36029658 aaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca-ttctccaccttaacttctaatttggtggtgatgtc 36029752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 3327863 - 3327806
Alignment:
Q  323 aaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  3327863 aaatttgaagtcaatttcaacatttctccaccttgacttctaatttggtggtgatgtc 3327806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 337
Target Start/End: Original strand, 32480745 - 32480922
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctg-caacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | ||||||||||||||||||  || |  ||| | ||||||    
T  32480745 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagagaacttggctcac 32480844  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
     ||  ||   |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  32480845 tgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32480922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 37466876 - 37466932
Alignment:
Q  323 aaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  37466876 aaatttgaagtcaatttcaacatttctccaccttgacttctaa-ttggtgatgatgtc 37466932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 7782445 - 7782584
Alignment:
Q  61 ccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaa 155  Q
    ||||||||||||||||||||||| |||| |||||| | ||   || |  |||||||||| ||||| ||  |||||||||||||| |  ||| ||||||||    
T  7782445 ccttcaaatctgcacaagaacacttaaa-tactagccctccactgataaaatcgtgtcacgattt-ccagatcgtgtcacgattggtacgttcgtcccaa 7782542  T
Q  156 ggaacgaccagtccttatcaaggatacttaacgagcaagttt 197  Q
    || ||||||||||||||||| ||| |||||||||||||||||    
T  7782543 ggcacgaccagtccttatcatggaaacttaacgagcaagttt 7782584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 8517523 - 8517707
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | || ||| ||||||||    
T  8517523 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 8517622  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
     ||  ||   ||||||||||||   |||||||||| ||||||| | ||||||| | | ||||| ||||||||| ||||| |||||    
T  8517623 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcctaaaccactaatttgaagtcaattccaaca 8517707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 8738599 - 8738542
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8738599 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 9090837 - 9090780
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9090837 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9090780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 6794240 - 6794184
Alignment:
Q  324 aatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  6794240 aatttaaagtcaattacaacatttctccaccttgacttctaatgtggtgatgatgtc 6794184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 21711768 - 21711820
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 21711820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 24968520 - 24968704
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  || ||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | || ||| | ||||||    
T  24968520 gaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 24968619  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
     ||  ||   |||||||||||||  | |||||||| ||||||| |  |||||||||| ||||| ||||||||| ||||| |||||    
T  24968620 tgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcctttgttcttccaaaccactaatttgaagtcaattccaaca 24968704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 332
Target Start/End: Original strand, 27027174 - 27027318
Alignment:
Q  189 agcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaaccta-gctcacggcacccgaaatcgtgtcacgataccaa 287  Q
    ||||||||| |  ||||||||||| ||| || |||||||| |||||||  ||||||||||| | | |||||| ||    |||||||||| ||| |    |    
T  27027174 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcactctgcaaaccatgctcactgcctgggaaatcgtgttacgttgatga 27027273  T
Q  288 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  27027274 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 27974493 - 27974433
Alignment:
Q  285 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaaca 344  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 40734132 - 40734084
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 335  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagaca 40734084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 32143868 - 32143915
Alignment:
Q  285 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  32143868 caaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaag 32143915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 16264896 - 16264946
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaat 16264946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 30709316 - 30709266
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 30709266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 39032075 - 39032013
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa-tttcaacatttc 348  Q
    |||||||||||||||||| ||||||||||| || |||||||||||| ||| ||||||||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaacatttc 39032013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 40735063 - 40734984
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttctaatt 367  Q
    |||||||||||||||||  |||||| |||| ||||||||||||||||||    ||||| ||||||||||||||||| ||||    
T  40735063 aaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaagacatacacaaca-ttctccaccttgacttcaaatt 40734984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 27986017 - 27985971
Alignment:
Q  285 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 331  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 27986103 - 27986001
Alignment:
Q  181 acttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcac 279  Q
    ||||||| ||||||||| |  ||||||||||||||   |  |||||||||||||||| |||| |||||| | ||||||||||| | | ||||||||||||    
T  27986103 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 27986004  T
Q  280 gat 282  Q
    |||    
T  27986003 gat 27986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 1730959 - 1730915
Alignment:
Q  294 gtcacgatttccctgttcttccagaccacaaatttgaagacaatt 338  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 1730915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 27038608 - 27038660
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    |||||||||||||||||| ||||| ||||| |||||||| |||||| ||||||    
T  27038608 aaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattt 27038660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 40592302 - 40592251
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatt 338  Q
    ||||| |||||||||||| | ||||||||| ||||||||||||||| |||||    
T  40592302 aaatcatgtcacgatttctccgttcttccaaaccacaaatttgaagccaatt 40592251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 16498694 - 16498636
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    ||||| |||||||||||| |||||  |||| ||||||||||||||| |||| |||||||    
T  16498694 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaacat 16498636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 35926057 - 35926106
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||||| ||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaat 35926106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 40845220 - 40845270
Alignment:
Q  286 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 336  Q
    ||||||||||||||||||| ||||||| ||| | || ||||||||||||||    
T  40845220 aaaatcgtgtcacgatttctctgttctcccaaaacataaatttgaagacaa 40845270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 48438782 - 48438832
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| |||||||| || ||||||||||| ||| ||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaat 48438832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 36536789 - 36536830
Alignment:
Q  202 atcgtgtcacgattttcccaaatcgtgtcacgattttgcact 243  Q
    ||||||||||| ||| |||||| |||||||||||||||||||    
T  36536789 atcgtgtcacgttttgcccaaaacgtgtcacgattttgcact 36536830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 380
Target Start/End: Complemental strand, 4386505 - 4386466
Alignment:
Q  340 caacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  4386505 caacatttctccaccttgac-tctaaattggtgatgatgtc 4386466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 34166952 - 34166632
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  34166952 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaagga 34166854  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa-tcgtgtcacgattttgcactc-tgcaacc-tagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||| | ||||||| || |    
T  34166853 acgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgattt-gcacccctgcaaccctaac 34166755  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacct 355  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  34166754 tcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaacatttctccacct 34166655  T
Q  356 tgacttctaatttggtgatgatg 378  Q
    |||||||||||||||||||||||    
T  34166654 tgacttctaatttggtgatgatg 34166632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 50 - 378
Target Start/End: Complemental strand, 16554750 - 16554420
Alignment:
Q  50 tccaactctccccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgt 146  Q
    ||||||||| | |||||||||||||||||||||  | |  |||||| ||||   ||||  |||||||||| ||||| || |||||||||||||| |||||    
T  16554750 tccaactcttctcttcaaatctgcacaagaacaattta--tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgt 16554653  T
Q  147 ccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctg 246  Q
     |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||    
T  16554652 accacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctg 16554553  T
Q  247 caacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
     |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16554552 taacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacat 16554453  T
Q  346 ttctccaccttgacttctaatttggtgatgatg 378  Q
    ||||||||||||||||||||||||| |||||||    
T  16554452 ttctccaccttgacttctaatttggcgatgatg 16554420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 50 - 378
Target Start/End: Complemental strand, 16631306 - 16630976
Alignment:
Q  50 tccaactctccccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgt 146  Q
    ||||||||| | |||||||||||||||||||||  | |  |||||| ||||   ||||  |||||||||| ||||| || |||||||||||||| |||||    
T  16631306 tccaactcttctcttcaaatctgcacaagaacaattta--tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgt 16631209  T
Q  147 ccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctg 246  Q
     |  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||    
T  16631208 accacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctg 16631109  T
Q  247 caacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
     |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16631108 taacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacat 16631009  T
Q  346 ttctccaccttgacttctaatttggtgatgatg 378  Q
    ||||||||||||||||||||||||| |||||||    
T  16631008 ttctccaccttgacttctaatttggcgatgatg 16630976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 107 - 344
Target Start/End: Original strand, 16578863 - 16579101
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 206  Q
    |||||||||| ||||| || |||||||||||||| ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16578863 aatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 16578962  T
Q  207 gtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttcc 305  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16578963 gtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttcc 16579062  T
Q  306 ctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  16579063 ctgttcttccagaccacaaatttgaagacaatctcaaca 16579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 107 - 344
Target Start/End: Complemental strand, 16616517 - 16616279
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 206  Q
    |||||||||| ||||| || |||||||||||||| ||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16616517 aatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 16616418  T
Q  207 gtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttcc 305  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16616417 gtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttcc 16616318  T
Q  306 ctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  16616317 ctgttcttccagaccacaaatttgaagacaatctcaaca 16616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 108 - 344
Target Start/End: Complemental strand, 25421034 - 25420797
Alignment:
Q  108 atcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtg 207  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25421034 atcgtgtcacgattttcccaatcatgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtg 25420935  T
Q  208 tcacgattttcccaaatcgtgtcacgattttgca-ctctgcaa-cctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttcc 305  Q
    ||||||||||||||||||||| ||||| |||||| | |||||| |||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||    
T  25420934 tcacgattttcccaaatcgtgccacga-tttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacggtcccaaaattgtgtcacgatttcc 25420836  T
Q  306 ctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  25420835 ctgttcttccagaccacaaatttgaagacaatctcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 62 - 344
Target Start/End: Original strand, 6136263 - 6136547
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    ||||||||||||||||||| || |||| |||||||||||   |||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||    
T  6136263 cttcaaatctgcacaagaa-acttaaa-tactagtcttcctctgttccaatcgtgtcacgattttcccaattgtgtcacgatttgcttccgtcccaagga 6136360  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaa-cctagctc 257  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| |||||||||   | |||||| ||||||||    
T  6136361 acgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctc 6136460  T
Q  258 acggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  6136461 acggcatccgaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 6136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 62 - 344
Target Start/End: Original strand, 33342402 - 33342688
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  33342402 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaagga 33342500  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcc-caaatcgtgtcacgattttgca-ctctgcaa-cctagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||| ||||| |||||| | |||||| ||||||    
T  33342501 acgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacga-tttgcacccctgcaaccctagc 33342599  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||| ||||||||| ||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  33342600 tcacggcatccgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 62 - 346
Target Start/End: Complemental strand, 6027119 - 6026832
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6027119 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 6027021  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactc-tgcaacc-tagct 256  Q
    |||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |||| | ||||||| |||||    
T  6027020 acgaccggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagct 6026922  T
Q  257 cacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatt 346  Q
    | || |||| |||||||||||||| || ||  |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  6026921 ctcg-cacctcgaaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaagacaatctcaacatt 6026832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 62 - 336
Target Start/End: Complemental strand, 34164730 - 34164452
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  34164730 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtcacgatttgcgtccgtcccaagga 34164632  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaatcgtgtcacgattttgca-ctctgcaa-cctagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| ||||| |||||| | |||||| |||| |    
T  34164631 acgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacga-tttgcacccctgcaaccctaac 34164533  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 336  Q
    |||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  34164532 tcacggcatccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaa 34164452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 125 - 336
Target Start/End: Complemental strand, 13151070 - 13150857
Alignment:
Q  125 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaa 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||    
T  13151070 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaa 13150971  T
Q  224 tcgtgtcacgattttgca-ctctgcaa-cctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagacca 321  Q
    ||||||||||| |||||| | |||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||    
T  13150970 tcgtgtcacga-tttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagcca 13150872  T
Q  322 caaatttgaagacaa 336  Q
    |||||||||||||||    
T  13150871 caaatttgaagacaa 13150857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 126 - 336
Target Start/End: Complemental strand, 27647687 - 27647476
Alignment:
Q  126 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatc 225  Q
    ||||||||||||||| ||||| |  |||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  |  ||||    
T  27647687 caatcgtgtcacgatctgcgtaccacccaagaaacgaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatc 27647588  T
Q  226 gtgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaa 324  Q
    ||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  27647587 gtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaa 27647488  T
Q  325 atttgaagacaa 336  Q
    ||||||||||||    
T  27647487 atttgaagacaa 27647476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 50 - 378
Target Start/End: Complemental strand, 16652993 - 16652682
Alignment:
Q  50 tccaactctccccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgt 146  Q
    ||||||||| | |||||||||||||||||||||  | |  |||||| ||||   ||||  |||||||||| ||||| || |||||||||||||| |||||    
T  16652993 tccaactcttctcttcaaatctgcacaagaacaattta--tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgt 16652896  T
Q  147 ccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctg 246  Q
     |  |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||||| ||     
T  16652895 accacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttccacgactttgcacccta 16652796  T
Q  247 caacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    ||||||||||||||||| ||||||||||||                   ||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  16652795 caacctagctcacggcaccccgaaatcgtg-------------------tcacgatttccctgttctttcagaccacaaatttgaagacaatctcaacat 16652715  T
Q  346 ttctccaccttgacttctaatttggtgatgatg 378  Q
    ||||||||||||||||| |||||||||||||||    
T  16652714 ttctccaccttgacttcaaatttggtgatgatg 16652682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 25421176 - 25421000
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  25421176 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcatgtcacgatttgcgtccgtcccaagga 25421078  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattt 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  25421077 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aatcatgtcacgattt 25421000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 380
Target Start/End: Original strand, 11857330 - 11857603
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 206  Q
    ||||||| || ||||| || ||||||||||||||||||  | | |||||||   ||| |||||||||||  | |||||||||||||||||||   |||||    
T  11857330 aatcgtgccacgatttcccaaatcgtgtcacgatttgcaacggacccaaggtt-gacaagtccttatcagtgttacttaacgagcaagtttctaaatcgt 11857428  T
Q  207 gtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggc-acccgaaatcgtgtcacgataccaaaatcgtgtcacgatttcc 305  Q
    |||||||||| || | |||||| |||||||| ||   |||||| |||||||||||| ||  |||||||||||||||| |||||||||||||||||||||     
T  11857429 gtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttct 11857528  T
Q  306 ctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  11857529 ctgttcttccagaccacaaatttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgatgtc 11857603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 65 - 332
Target Start/End: Complemental strand, 5674512 - 5674242
Alignment:
Q  65 caaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 161  Q
    ||||||||||||||||||| | ||||||||| ||||   || | ||||||||||| ||||| ||  ||||||||||||||||||| |||||||||| | |    
T  5674512 caaatctgcacaagaacactttaaatactagccttcctctgatacaatcgtgtcacgattt-ccagatcgtgtcacgatttgcgtacgtcccaaggtatg 5674414  T
Q  162 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacgg 261  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||||||| || | || |||||||||||| |||| |||||| | |||||||||    
T  5674413 accagtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacgg 5674314  T
Q  262 ca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    || | | ||||| ||||||||| ||||| || |||||||||||| |||||||||||||||||||||||||||    
T  5674313 catcacaaaatcatgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaag 5674242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 165 - 380
Target Start/End: Complemental strand, 14742106 - 14741890
Alignment:
Q  165 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggc-a 263  Q
    |||||||||||  |||||||||||||||||||||   |||||||||||||||||| | |||||| |||||||| ||   |||||| |||||||||| | |    
T  14742106 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacca 14742007  T
Q  264 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttct 363  Q
    |  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  14742006 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacatttctccaccttgacttct 14741907  T
Q  364 aatttggtgatgatgtc 380  Q
    ||||||||| |||||||    
T  14741906 aatttggtggtgatgtc 14741890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 131 - 336
Target Start/End: Complemental strand, 411903 - 411694
Alignment:
Q  131 gtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgattttcccaaatcgt 227  Q
    |||||||||||  ||| |||||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| ||  ||||||    
T  411903 gtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgt 411804  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    |||||||||| |||| |||||  ||||||||||||||| |||||| ||||||| || ||||| |||||||||||||||||| ||||||||||||||||||    
T  411803 gtcacgatttggcaccctgcagactagctcacggcaccacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccacaaat 411704  T
Q  327 ttgaagacaa 336  Q
    ||||||||||    
T  411703 ttgaagacaa 411694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 178 - 344
Target Start/End: Complemental strand, 30125185 - 30125018
Alignment:
Q  178 gatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgt 276  Q
    |||||||||||||||||||||   ||||||||||||||| || |||||||| |||||||| ||   |||||| ||||||||||||||| |||||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgt 30125086  T
Q  277 cacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  30125085 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30125018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 127 - 331
Target Start/End: Original strand, 2171883 - 2172090
Alignment:
Q  127 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    ||||||||||||||| |  ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| || ||||||||||||||| || | ||    
T  2171883 aatcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcttggaaacttaacgagcaagttttacaatcgtgtcacgatttcccaagat 2171982  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
    ||||||||||||| |||| |||||| | ||||||||||| | ||||||||||||||||| ||||| || |||| ||||||| ||||||||||||||||||    
T  2171983 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccaca 2172082  T
Q  324 aatttgaa 331  Q
    ||||||||    
T  2172083 aatttgaa 2172090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 66 - 332
Target Start/End: Original strand, 22709362 - 22709632
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgc--gtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||||||||   |  |  |||||||||| ||||| || | |||||||||||||||   || |||| ||||| ||    
T  22709362 aaatctgcacaagaacacttaaa-tactagtcttccactaataaaatcgtgtcacgattt-ccaagtcgtgtcacgatttgtatgtacgtcacaaggtac 22709459  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    ||||||||||||||| ||| ||||||||||||||||| |  ||||||||||||||| || | ||||||||||||||| |||| |||||| | |||||| |    
T  22709460 gaccagtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcatg 22709559  T
Q  261 gca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||| | | ||||||||||||| | ||||| |||||||| |||||| |||||||||||||||||||||||||||    
T  22709560 gcatcacaaaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaag 22709632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 107 - 336
Target Start/End: Original strand, 3073103 - 3073334
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 204  Q
    |||||||||| ||||| ||  ||||||| ||||||  ||| ||| |||||||| | ||||||||||||||| ||| |||||||||||||||||    |||    
T  3073103 aatcgtgtcacgattt-ccagatcgtgtaacgattagtgcatccatcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatc 3073201  T
Q  205 gtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgattt 303  Q
    |||||||||||| |   |||||||||||||||| |||| ||| |  | ||||||||||| | ||||||||||||||||| ||||| ||||||||||||||    
T  3073202 gtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtagaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattt 3073301  T
Q  304 ccctgttcttccagaccacaaatttgaagacaa 336  Q
     ||||||||||||||||||||||||||||||||    
T  3073302 tcctgttcttccagaccacaaatttgaagacaa 3073334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 128 - 345
Target Start/End: Complemental strand, 22010405 - 22010188
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    |||||||||||||||||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||    
T  22010405 atcgtgtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 22010307  T
Q  228 gtcacgattttgcactctgcaacctagctcacggc-acccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||   |||||| ||| || ||||| ||  |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  22010306 gccacgatttggcgtcctgcaaactaacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 22010207  T
Q  327 ttgaagacaatttcaacat 345  Q
    |||||| |||| |||||||    
T  22010206 ttgaagccaatatcaacat 22010188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 126 - 282
Target Start/End: Original strand, 5266453 - 5266610
Alignment:
Q  126 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatc 225  Q
    |||||||||||||||||||||||||  ||||| | |||||||||||||||||||||||||| |||||||||||   ||||||||||||||| || | |||    
T  5266453 caatcgtgtcacgatttgcgtccgtttcaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 5266552  T
Q  226 gtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgat 282  Q
    ||| |||||||| ||   |||||| ||||||||||||||| |||||||||||||||||    
T  5266553 gtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 6438899 - 6439083
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||||||| ||||  | |||| || | |||||    
T  6438899 gaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctcac 6438998  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||   |||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||||    
T  6438999 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaatttcaaca 6439083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 161 - 380
Target Start/End: Complemental strand, 33335614 - 33335393
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | |||| || | |||||    
T  33335614 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33335515  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt-caacatttctccaccttga 358  Q
    |||| |    |||||||||||||  | |||||| |  |||||| | ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||    
T  33335514 ggcatctccgatcgtgtcacgattgccaaatcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatttctccaccttga 33335415  T
Q  359 cttctaatttggtgatgatgtc 380  Q
    |||||||||||||| |||||||    
T  33335414 cttctaatttggtggtgatgtc 33335393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 220 - 336
Target Start/End: Original strand, 6097860 - 6097977
Alignment:
Q  220 caaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccaga 318  Q
    |||||||||||||||||| |||| |||||| | ||||||||||| | ||||||||||||||||| ||||| |||||||| |||||||||||||||||| |    
T  6097860 caaatcgtgtcacgatttagcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaa 6097959  T
Q  319 ccacaaatttgaagacaa 336  Q
    ||||||||||||||||||    
T  6097960 ccacaaatttgaagacaa 6097977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 250 - 336
Target Start/End: Complemental strand, 34151922 - 34151836
Alignment:
Q  250 cctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 336  Q
    |||| ||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  34151922 cctaactcacggcatccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaa 34151836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 336
Target Start/End: Complemental strand, 26253714 - 26253598
Alignment:
Q  221 aaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 319  Q
    ||||||||||||||||| |||| |||| | ||| ||||||| | | | ||||| ||||||||| ||||| ||||||||||||||| |||||||| |||||    
T  26253714 aaatcgtgtcacgatttggcaccctgctaactatctcacggtatcacaaaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagac 26253615  T
Q  320 cacaaatttgaagacaa 336  Q
    |||||||||||||||||    
T  26253614 cacaaatttgaagacaa 26253598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 339
Target Start/End: Original strand, 16839092 - 16839325
Alignment:
Q  107 aatcgtgtcatgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    |||||||||| ||||| || | ||||||||||||| |||  | |||||||||   |||||||||||||||  |||||||||| ||||||||||   ||||    
T  16839092 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggtt-gaccagtccttatcagagatacttaaccagcaagtttctgaatcg 16839190  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | |||||| |||||||||||   | || ||| | |||||||||| |    |||||||||||||  | |||||| | ||||||| |    
T  16839191 tgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcc 16839290  T
Q  305 cctgttcttccagaccacaaatttgaagacaattt 339  Q
     ||||||||||| ||||||||||||||| ||||||    
T  16839291 tctgttcttccaaaccacaaatttgaagccaattt 16839325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 5343880 - 5344064
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgca-acctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | ||||||||||||||||||  || | | || | ||||||    
T  5343880 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgctttcagaagacttggctcac 5343979  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
      |  ||   |||||||||||||  | |||||||| ||||||||| ||||||| ||| ||||||||||||||| ||||| |||||    
T  5343980 ttcctccctgatcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaattccaaca 5344064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 339
Target Start/End: Complemental strand, 33330117 - 33329938
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | || ||| | ||||||    
T  33330117 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 33330018  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    |||| |    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||||    
T  33330017 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattt 33329938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 14737246 - 14737128
Alignment:
Q  165 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacgg-ca 263  Q
    |||||||||||  |||||||||||||||||||||   |||||||||||||||||| | |||||| |||||||| ||   |||||| ||||||||||| ||    
T  14737246 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcca 14737147  T
Q  264 cccgaaatcgtgtcacgat 282  Q
    |  ||||||||||||||||    
T  14737146 cttgaaatcgtgtcacgat 14737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 28155255 - 28155133
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| || | |||||| ||||||||||||| |||| ||| | ||||||    
T  28155255 gaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctcac 28155156  T
Q  260 ggcacccgaaatcgtgtcacgat 282  Q
    |||| |  | |||||||||||||    
T  28155155 ggcatctcagatcgtgtcacgat 28155133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 23896880 - 23896958
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaacat 345  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||| || ||||||||||||||| | |||||||||||    
T  23896880 aaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaacat 23896958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 5266596 - 5266653
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  5266596 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 5266653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 14737142 - 14737085
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14737085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 339
Target Start/End: Original strand, 6005822 - 6006001
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | || ||| | |||||     
T  6005822 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcat 6005921  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    |||| |    |||||||||||||  | |||||| | ||||||| | ||||| ||||| ||||||||||||||| ||||||    
T  6005922 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaattt 6006001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 6097786 - 6097858
Alignment:
Q  127 aatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt 197  Q
    |||||||||||||||  ||||| |||||| ||| ||||||||||||||||| ||| |||||||||||||||||    
T  6097786 aatcgtgtcacgattggtgcgtacgtccccaggtacgaccagtccttatcatggaaacttaacgagcaagttt 6097858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 28155145 - 28155090
Alignment:
Q  289 atcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||| | ||||||||||||||||||||||||||| ||||| |||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaattccaaca 28155090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 5017026 - 5016975
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatt 338  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||| |||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaatt 5016975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 31086003 - 31085952
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatt 338  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||| |||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaatt 31085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 16568652 - 16568599
Alignment:
Q  324 aatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatg 378  Q
    ||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||    
T  16568652 aatttgaaggcagtttcaacatttctccgccttgacttctaa-ttggtgatgatg 16568599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 5571806 - 5571749
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||||||| || |||| ||| | ||||||||||||||||| |||||||    
T  5571806 aaatcgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaattcaaca 5571749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16554795 - 16554762
Alignment:
Q  1 ctaaaccctagagttgcccctttgattccccaag 34  Q
    ||||||||||||||||||||||||||||||||||    
T  16554795 ctaaaccctagagttgcccctttgattccccaag 16554762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16578760 - 16578793
Alignment:
Q  1 ctaaaccctagagttgcccctttgattccccaag 34  Q
    ||||||||||||||||||||||||||||||||||    
T  16578760 ctaaaccctagagttgcccctttgattccccaag 16578793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16616620 - 16616587
Alignment:
Q  1 ctaaaccctagagttgcccctttgattccccaag 34  Q
    ||||||||||||||||||||||||||||||||||    
T  16616620 ctaaaccctagagttgcccctttgattccccaag 16616587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16631351 - 16631318
Alignment:
Q  1 ctaaaccctagagttgcccctttgattccccaag 34  Q
    ||||||||||||||||||||||||||||||||||    
T  16631351 ctaaaccctagagttgcccctttgattccccaag 16631318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 24714938 - 24715000
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccac-aaatttgaagacaa-tttcaacattt 347  Q
    |||||||||||||||||| ||||| ||||| ||||| |||||||||| ||| |||||||||||    
T  24714938 aaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaattttcaacattt 24715000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 26253795 - 26253698
Alignment:
Q  121 tttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 216  Q
    ||||| |||||||||||||||  | ||| |||| ||| | ||||||||||||||||  | | ||||||| ||||||||| |  |||||||||||||||    
T  26253795 tttccaaatcgtgtcacgattgatacgtacgtcacaaagtacgaccagtccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattt 26253698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 6097732 - 6097776
Alignment:
Q  55 ctctccccttcaaatctgcacaagaacacataaaatactagtcttc 100  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||    
T  6097732 ctctcaccttcaaatctgcacaagaacac-ttaaatactagtcttc 6097776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 13020087 - 13020124
Alignment:
Q  202 atcgtgtcacgattttcccaaatcgtgtcacgattttg 239  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  13020087 atcgtgtcacgatgtacccaaatcgtgtcacgattttg 13020124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16653038 - 16653005
Alignment:
Q  1 ctaaaccctagagttgcccctttgattccccaag 34  Q
    |||||||||||||||||||||||||||| |||||    
T  16653038 ctaaaccctagagttgcccctttgattctccaag 16653005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 21272514 - 21272469
Alignment:
Q  292 gtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||||| |||| | ||||||||||||| ||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaagccaat 21272469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 5138161 - 5137841
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  5138161 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtcacgatttgcgtccgtcccaagga 5138063  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaa-tcgtgtcacgattttgcactc-tgcaacc-tagc 255  Q
    |||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| |||||||| |||| | ||||||| || |    
T  5138062 acgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgattt-gcacccctgcaaccctaac 5137964  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacct 355  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  5137963 tcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaacatttctccacct 5137864  T
Q  356 tgacttctaatttggtgatgatg 378  Q
    |||||||||||||||||||||||    
T  5137863 tgacttctaatttggtgatgatg 5137841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 62 - 378
Target Start/End: Complemental strand, 8395475 - 8395157
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| | |  |||||| ||||   ||||  |||||||||| ||||| || |||||||||||||| ||||| |  |||||| |    
T  8395475 cttcaaatctgcacaagaacacttta--tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaa 8395378  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactc-tgcaacc-tagct 256  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||| ||||||||||||||||||||||||  ||||||| |||| | ||||||| |||||    
T  8395377 acgaccagtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgattt-gcacccctgcaaccctagct 8395279  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacctt 356  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8395278 cacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacatttctccacctt 8395179  T
Q  357 gacttctaatttggtgatgatg 378  Q
    ||||||||||||||||||||||    
T  8395178 gacttctaatttggtgatgatg 8395157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 62 - 336
Target Start/End: Complemental strand, 7122552 - 7122275
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7122552 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 7122454  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgca-ctctgcaa-cctagct 256  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| ||||| |||||| | |||||| |||||||    
T  7122453 acgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga-tttgcacccctgcaaccctagct 7122355  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 336  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7122354 cacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaa 7122275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 62 - 344
Target Start/End: Complemental strand, 5135935 - 5135649
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  5135935 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgtccaatcgtgtcacgatttgcgtccgtcccaagga 5135837  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaatcgtgtcacgattttgca-ctctgcaa-cctagc 255  Q
    |||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| ||||| |||||| | |||||| |||| |    
T  5135836 acgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacga-tttgcacccctgcaaccctaac 5135738  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  5135737 tcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 153 - 378
Target Start/End: Complemental strand, 7124681 - 7124455
Alignment:
Q  153 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactc-tgcaacc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| |||||||| |||| | |||||||    
T  7124681 caaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaacc 7124583  T
Q  252 -tagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctc 350  Q
     |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  7124582 ctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaactcaacatttctc 7124483  T
Q  351 caccttgacttctaatttggtgatgatg 378  Q
    ||||||||||||||||||||||||||||    
T  7124482 caccttgacttctaatttggtgatgatg 7124455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 62 - 344
Target Start/End: Complemental strand, 8393266 - 8392982
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| | |  |||||| ||||   ||||  |||||||||| ||||| || |||||||||||||| ||||| |  |||||| |    
T  8393266 cttcaaatctgcacaagaacacttta--tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaa 8393169  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactc-tgcaacc-tagct 256  Q
    | ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |||| | ||||||| |||||    
T  8393168 aagaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgattt-gcacccctgcaaccctagct 8393070  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8393069 cacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 65 - 344
Target Start/End: Original strand, 24742295 - 24742577
Alignment:
Q  65 caaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacg 161  Q
    ||||||||||||||||||||  | ||||||||||||   ||    |||||||||| ||||| ||  |||||| |||||||||||||||| || ||| | |    
T  24742295 caaatctgcacaagaacacaatatatactagtcttcctctgaagaaatcgtgtcacgattt-ccagatcgtggcacgatttgcgtccgttcccaggtatg 24742393  T
Q  162 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacgg 261  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| |||||||||||    
T  24742394 accagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgg 24742493  T
Q  262 cacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  24742494 cacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 24742577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 128 - 380
Target Start/End: Complemental strand, 9228902 - 9228650
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||| |||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||    
T  9228902 atcgtgtcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 9228804  T
Q  228 gtcacgattttgcactctgcaacctagctcacggc-acccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||   |||||| | |||||||||| ||  |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  9228803 gccacgatttggcgtcctgcaaacgagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 9228704  T
Q  327 ttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  9228703 ttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgatgtc 9228650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 161 - 378
Target Start/End: Original strand, 18856125 - 18856343
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | ||| || ||||||||||||  | |||| || | |||||    
T  18856125 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctcac 18856224  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgac 359  Q
    ||||||   |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18856225 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacatttctccaccttgac 18856324  T
Q  360 ttctaatttggtgatgatg 378  Q
    ||||||||||||| |||||    
T  18856325 ttctaatttggtggtgatg 18856343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 131 - 336
Target Start/End: Original strand, 31495685 - 31495893
Alignment:
Q  131 gtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtg 228  Q
    |||||||||||  ||||| ||||||||| |||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| ||  |||||||    
T  31495685 gtgtcacgattggtgcgttcgtcccaagaaacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtg 31495784  T
Q  229 tcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatt 327  Q
    ||||||||| |||| |||||| | ||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  31495785 tcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatt 31495884  T
Q  328 tgaagacaa 336  Q
    |||||||||    
T  31495885 tgaagacaa 31495893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 60 - 332
Target Start/End: Original strand, 13992590 - 13992866
Alignment:
Q  60 cccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtccca 154  Q
    |||| ||||||||||||||||||| |||| |||||||||||   || |  |||||||||| ||||| ||  ||||||||||||||  | ||| |||| ||    
T  13992590 ccctccaaatctgcacaagaacacttaaa-tactagtcttccactgataaaatcgtgtcacgattt-ccagatcgtgtcacgattgatacgtacgtcaca 13992687  T
Q  155 aggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag 254  Q
    ||| | ||||||||||||||| | | ||||||||||||||||| |  ||||||||||||||| || ||||||||||||||||| |||| |||||| | ||    
T  13992688 aggtatgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccag 13992787  T
Q  255 ctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||||| || | ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  13992788 ctcacgacatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 13992866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 118 - 344
Target Start/End: Original strand, 51520824 - 51521050
Alignment:
Q  118 gattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttt 217  Q
    ||||| || ||||||||||||||||||||| | ||||||| | || |||||||||||| ||||||||||||||||||||||   ||||||||| |||||     
T  51520824 gatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gatcagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttc 51520922  T
Q  218 cccaaatcgtgtcacgattttgcactctgcaacctagctcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttcca 316  Q
    || | |||||| |||||||| ||   |||||| |||||||||||| ||  |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  51520923 ccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttcca 51521022  T
Q  317 gaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||||| |||| ||||||    
T  51521023 gaccacaaatttgaagccaatatcaaca 51521050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 128 - 346
Target Start/End: Complemental strand, 56141728 - 56141509
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||||||| || | ||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||||||||||||| || | |||||    
T  56141728 atcgtgtcacgatttgcatctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 56141630  T
Q  228 gtcacgattttgcactc-tgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    | ||||||||||   || ||||| |||||||||| | || | ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  56141629 gccacgattttggcgtcctgcaaactagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaa 56141530  T
Q  326 tttgaagacaatttcaacatt 346  Q
    ||||||| |||| ||||||||    
T  56141529 tttgaagccaatatcaacatt 56141509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 332
Target Start/End: Complemental strand, 28468217 - 28467990
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 204  Q
    |||||||||| ||||| || | |||||||||||||||  ||| |||| ||||| |||||||||||||||||  || ||||||||||||||||| |  |||    
T  28468217 aatcgtgtcacgattt-ccaagtcgtgtcacgatttgtacgtacgtcacaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgaaaatc 28468119  T
Q  205 gtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgattt 303  Q
    ||||||||||||||| | ||||||||||||||| |||| |||||| | ||||||||||| | | ||||||||| ||||| ||||| ||||||||||||||    
T  28468118 gtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgttacgatgccaaattcgtgtcacgattt 28468019  T
Q  304 ccctgttcttccagaccacaaatttgaag 332  Q
    | ||||||||||| |||||||||||||||    
T  28468018 ctctgttcttccataccacaaatttgaag 28467990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 128 - 344
Target Start/End: Complemental strand, 9224115 - 9223899
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||| |||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||    
T  9224115 atcgtgtcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 9224017  T
Q  228 gtcacgattttgcactctgcaacctagctcacggc-acccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||   |||||| |||||||||||| ||  |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  9224016 gccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 9223917  T
Q  327 ttgaagacaatttcaaca 344  Q
    |||||| |||| ||||||    
T  9223916 ttgaagccaatatcaaca 9223899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 5733062 - 5733247
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagct-cac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | ||||||||||||||| ||   |||||| || ||| |||    
T  5733062 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttcac 5733161  T
Q  260 ggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||| |||||||| |||||||||||||||||| |||| ||||||    
T  5733162 ggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 5733247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 3814422 - 3814605
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| ||||||||||| |||||||| ||    ||||| || ||| |||    
T  3814422 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgattt-cccaaatcgtgacacgatttggcgtcttgcaaacttgcttacg 3814520  T
Q  261 g-cacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    | |||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3814521 gtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 3814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 127 - 282
Target Start/End: Original strand, 29761040 - 29761196
Alignment:
Q  127 aatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcg 226  Q
    ||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||   ||||||||||||||| || | ||||    
T  29761040 aatcgtgccacgatttgcgtccgtaccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcg 29761139  T
Q  227 tgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgat 282  Q
    || |||||||| ||   |||||| ||||||||||||||| |||||||||||||||||    
T  29761140 tgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 45347501 - 45347317
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||||||||||||  | |||| || | |||||    
T  45347501 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 45347402  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||| |   |||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  45347401 ggcatctctaatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaattttaaca 45347317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 18860431 - 18860521
Alignment:
Q  254 gctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||||||||   |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  18860431 gctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 165 - 304
Target Start/End: Complemental strand, 18712435 - 18712295
Alignment:
Q  165 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacgg-ca 263  Q
    |||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| ||||||||||| ||    
T  18712435 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcca 18712336  T
Q  264 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    |  |||||||||||||||| |||||||||||||||||||||    
T  18712335 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 18712295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 5143807 - 5143890
Alignment:
Q  285 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa-tttcaacatttctccaccttgacttctaatt 367  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacatttctccaccttgactactaatt 5143890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 221 - 332
Target Start/End: Complemental strand, 31985252 - 31985140
Alignment:
Q  221 aaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 319  Q
    ||||||||||||||||| |||| |||| | ||||||||||| | | | ||||||||||||||| ||||| ||||||||||||||| |||||||| ||||     
T  31985252 aaatcgtgtcacgatttggcaccctgctaactagctcacggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagat 31985153  T
Q  320 cacaaatttgaag 332  Q
    |||||||||||||    
T  31985152 cacaaatttgaag 31985140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 16628403 - 16628310
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat-ttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| | ||||| |||||||||| |||||||||||||||| |||||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca-ttctccacctcgacttctaatttggtggtgatgtc 16628310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 369
Target Start/End: Complemental strand, 6742946 - 6742864
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt-caacatttctccaccttgacttctaatttg 369  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaatttacaaca-ttctccaccttgacttctaatttg 6742864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 380
Target Start/End: Original strand, 3778116 - 3778207
Alignment:
Q  288 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat-ttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||| | ||||| |||||||||||||||||||| |||||| |||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaaca-ttctccaccttgacttctaa-ttggtggtgatgtc 3778207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 8689097 - 8689042
Alignment:
Q  284 ccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattt 8689042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 216
Target Start/End: Complemental strand, 31985389 - 31985236
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||||||||   || |  ||||||| || ||||| || |||||||||||||||  ||||| |||| ||||| ||    
T  31985389 aaatctgcacaagaacacttaaa-tactagtcttcaactgataaaatcgtgccacgattt-ccaaatcgtgtcacgattgatgcgtacgtcacaaggtac 31985292  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 216  Q
    ||||||||||||||  | | ||||||| ||||||||| |  |||||||||||||||    
T  31985291 gaccagtccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattt 31985236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 29761182 - 29761227
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  29761182 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 29761227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 45356982 - 45356861
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||||||||||||  | || ||| | ||||||    
T  45356982 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 45356883  T
Q  260 ggcacccgaaatcgtgtcacga 281  Q
    |||| |  ||||||||||||||    
T  45356882 ggcatctcaaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 339
Target Start/End: Original strand, 5148225 - 5148296
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    ||||||||||||| |   ||||||||||||||||||| || |||||||| ||||||||||||||| ||||||    
T  5148225 aaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaattt 5148296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 38151968 - 38151918
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 38151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 5268750 - 5268698
Alignment:
Q  286 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatt 338  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||| |||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 5268698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 10047932 - 10047982
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||| ||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaat 10047982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 16622824 - 16622774
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||| ||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaat 16622774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 54867745 - 54867796
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatt 338  Q
    |||||||||||||| ||| || |||||||| ||||||||||||||| |||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaatt 54867796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 48142857 - 48142823
Alignment:
Q  202 atcgtgtcacgattttcccaaatcgtgtcacgatt 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  48142857 atcgtgtcacgtttttcccaaatcgtgtcacgatt 48142823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 52083009 - 52083043
Alignment:
Q  202 atcgtgtcacgattttcccaaatcgtgtcacgatt 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  52083009 atcgtgtcacgtttttcccaaatcgtgtcacgatt 52083043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 52094016 - 52094050
Alignment:
Q  202 atcgtgtcacgattttcccaaatcgtgtcacgatt 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  52094016 atcgtgtcacgtttttcccaaatcgtgtcacgatt 52094050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 36314761 - 36314716
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||||||||||||||||| || |||||| | |||||||||||||||    
T  36314761 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36314716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 36328970 - 36328925
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||||||||||||||||| || |||||| | |||||||||||||||    
T  36328970 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 50 - 344
Target Start/End: Complemental strand, 44203516 - 44203218
Alignment:
Q  50 tccaactctc-cccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcg 145  Q
    |||||||||| |||||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||    
T  44203516 tccaactctcacccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcg 44203418  T
Q  146 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgca-ctc 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||| | |    
T  44203417 tccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga-tttgcacccc 44203319  T
Q  245 tgcaa-cctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaac 343  Q
    ||||| ||||||||||||||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44203318 tgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaac 44203219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 57 - 345
Target Start/End: Complemental strand, 9036292 - 9036002
Alignment:
Q  57 ctccccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtccc 153  Q
    |||| |||||||||||||||||||||| | |  |||||||||||   ||||  |||||||||| ||||||||||||||||||||||| |||||    |||    
T  9036292 ctcctcttcaaatctgcacaagaacacttta--tactagtcttcctctgttgaaatcgtgtcacgattttcccaatcgtgtcacgatctgcgtaacaccc 9036195  T
Q  154 aaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaaccta 253  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||| ||| ||||| ||||||| ||||||||||    
T  9036194 aagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaaccta 9036095  T
Q  254 gctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9036094 gctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacat 9036002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 106 - 336
Target Start/End: Original strand, 20622581 - 20622812
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    |||| |||||| |||||||| |||| || |||||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||    
T  20622581 caattgtgtcacgattttccaaatcatgccacgatttgcgtaccacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcg 20622680  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| ||  |||||||||||||||| |||| |||||  ||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  20622681 tgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttc 20622780  T
Q  305 cctgttcttccagaccacaaatttgaagacaa 336  Q
    ||||||||||||||||||||||||||||||||    
T  20622781 cctgttcttccagaccacaaatttgaagacaa 20622812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 107 - 336
Target Start/End: Complemental strand, 40282199 - 40281967
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgat 203  Q
    |||||||||| ||||| ||  ||||||||||||||  ||| |||||||||||| | ||||||||||||||| ||| ||||||||||||||||| ||| ||    
T  40282199 aatcgtgtcacgattt-cctgatcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaat 40282101  T
Q  204 cgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatt 302  Q
    ||||||||||||| ||  |||||||||||||||| |||| |||||||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||    
T  40282100 cgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacctagctcacggcaccactaaatcgtgtcacgatgccaaattcgtgtcacgatt 40282001  T
Q  303 tccctgttcttccagaccacaaatttgaagacaa 336  Q
    ||||| ||||||||||||||||||||||||||||    
T  40282000 tccctattcttccagaccacaaatttgaagacaa 40281967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 127 - 380
Target Start/End: Complemental strand, 19361133 - 19360876
Alignment:
Q  127 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    ||||||||||||||| |  ||| |||| ||||| |||||| |||||||||  ||| ||||||||||||||||| |  ||||||||||||||| || | ||    
T  19361133 aatcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagat 19361034  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
    ||||||||||||| |||| |||||| | ||||||||||| | | ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  19361033 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccaca 19360934  T
Q  324 aatttgaagac-aatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||||| | ||| ||||||||||||||||||||||| |||||||||| |||||||    
T  19360933 aatttgaagccaaatctcaacatttctccaccttgacttataatttggtggtgatgtc 19360876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 161 - 380
Target Start/End: Complemental strand, 44023561 - 44023341
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||||||||||||  | |||| || | |||||    
T  44023561 gaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 44023462  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgac 359  Q
    ||||||   |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  44023461 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacatttctccaccttgaa 44023362  T
Q  360 ttctaatttggtgatgatgtc 380  Q
    ||||||||||||| |||||||    
T  44023361 ttctaatttggtggtgatgtc 44023341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 107 - 344
Target Start/End: Complemental strand, 21053780 - 21053540
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagttt-cacgat 203  Q
    |||||||||| ||||| ||  ||||||||||||||  ||| |||||| ||||| | ||||||||||||||| ||| ||||||||||||||||| ||| ||    
T  21053780 aatcgtgtcacgattt-cctgatcgtgtcacgattggtgcatccgtctcaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaat 21053682  T
Q  204 cgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatt 302  Q
    ||||||||||||| ||  |||||||||||||||| ||||  ||||  ||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||    
T  21053681 cgtgtcacgatttcccacaatcgtgtcacgatttggcaccttgcattctagctcactgcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatt 21053582  T
Q  303 tccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  21053581 tccctgttcttccagaccacaaatttgaagacaatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 161 - 380
Target Start/End: Original strand, 41391002 - 41391221
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||||||||||||||  ||||||||| |||||||||||   ||| ||||||||||| || | |||||| |||||||| ||   |||||| || |||||||    
T  41391002 gaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacg 41391101  T
Q  261 gcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgact 360  Q
    ||| |  ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  41391102 gcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaaatcaacatttctccaccttgact 41391201  T
Q  361 tctaatttggtgatgatgtc 380  Q
    |||||||||||| |||||||    
T  41391202 tctaatttggtggtgatgtc 41391221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 336
Target Start/End: Complemental strand, 9987005 - 9986794
Alignment:
Q  128 atcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatc 225  Q
    ||||||||||||||  ||| |||||||||||| | ||||||||||||| | ||| |||||||||||||||||    ||||||||||||||| || |||||    
T  9987005 atcgtgtcacgattggtgcatccgtcccaaggtatgaccagtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatc 9986906  T
Q  226 gtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaa 324  Q
    |||||||||||| |||| |||||  | ||||||||||||| ||||||||||| |||||  |||| |||||||||||||||||||||||||||||||||||    
T  9986905 gtgtcacgatttggcacactgcagaccagctcacggcaccacgaaatcgtgttacgatgtcaaattcgtgtcacgatttccctgttcttccagaccacaa 9986806  T
Q  325 atttgaagacaa 336  Q
    ||||||||||||    
T  9986805 atttgaagacaa 9986794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 161 - 380
Target Start/End: Complemental strand, 25444776 - 25444556
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| | ||||||||  |||||||||||||||| || | |||||| ||||||||||||  || ||| || | |||||    
T  25444776 gaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctcac 25444677  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgac 359  Q
    |||| |  |||||||||||||||  | |||||||||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  25444676 ggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaattccaacatttctccaccttgac 25444577  T
Q  360 ttctaatttggtgatgatgtc 380  Q
    ||||||||||||| |||||||    
T  25444576 ttctaatttggtggtgatgtc 25444556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 39445898 - 39446082
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||||||||||||||  |||||||||| ||||| || | |||||| |||||||| ||   |||||| || | |||||    
T  39445898 gaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcac 39445997  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||| |  ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  39445998 ggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 39446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 66 - 332
Target Start/End: Complemental strand, 19366051 - 19365781
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||||||||   || |  |||||||||| ||||| || | ||||||||||||| |  ||| |||| ||| | ||    
T  19366051 aaatctgcacaagaacacttaaa-tactagtcttccactgataaaatcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaatgtac 19365954  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||| |||||||||  ||| | ||||||||||||||| |  ||||||||||||||| || | ||||||||||||||| |||| |||||| | ||||||||    
T  19365953 gacctgtccttatcctggaaaattaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 19365854  T
Q  261 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||| | | ||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  19365853 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaag 19365781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 127 - 328
Target Start/End: Complemental strand, 51765211 - 51765007
Alignment:
Q  127 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    ||||||||||||||| |  ||| |||| ||||| | ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||   | | ||    
T  51765211 aatcgtgtcacgattggtacgtacgtcacaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagat 51765112  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
    ||||||||||||| |||| |||||| | ||||||||||| | |||||||||||||||||  |||| ||||||||||||||| ||||||||||||||||||    
T  51765111 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccaca 51765012  T
Q  324 aattt 328  Q
    |||||    
T  51765011 aattt 51765007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 25439583 - 25439399
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| || | |||||| ||||||||||||  |||||| || | |||||    
T  25439583 gaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctcac 25439484  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||| |  |||||||||||||||  | |||||||||||||||| | ||||||||||||||||||||||||||| ||||| |||||    
T  25439483 ggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaattccaaca 25439399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 161 - 345
Target Start/End: Complemental strand, 1054698 - 1054513
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| || | |||||    
T  1054698 gaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctcac 1054599  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    ||||||   |||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  1054598 ggcacctccaatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaatttcaacat 1054513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 128 - 282
Target Start/End: Complemental strand, 24793864 - 24793709
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    |||||||||||||||||||| | |||||||   ||||||||||||||||||||||||||||||||||||||   ||||||||||||||| || | |||||    
T  24793864 atcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 24793765  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgat 282  Q
    | |||||||| ||   |||||| ||||||||||||||| |||||||||||||||||    
T  24793764 gccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 332
Target Start/End: Complemental strand, 24202376 - 24202264
Alignment:
Q  221 aaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 319  Q
    ||||||||||||||||| |||| |||||| | ||||||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  24202376 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagac 24202277  T
Q  320 cacaaatttgaag 332  Q
    |||||||||||||    
T  24202276 cacaaatttgaag 24202264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 120 - 348
Target Start/End: Complemental strand, 13604322 - 13604091
Alignment:
Q  120 ttttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttt 217  Q
    |||||| |||||||||||||||  | ||| || ||||||| |||||||  |||||||  | | ||||||| ||||||||| |  ||| ||||||||||      
T  13604322 ttttccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattcc 13604224  T
Q  218 cccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttcca 316  Q
     | |||||||||||||||||  ||| |||||| | |||||||| || | | |||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  13604223 acaaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttcca 13604124  T
Q  317 gaccacaaatttgaagac-aatttcaacatttc 348  Q
     ||||||||||||||||| ||| ||||||||||    
T  13604123 aaccacaaatttgaagacaaatctcaacatttc 13604091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 128 - 265
Target Start/End: Complemental strand, 24787042 - 24786905
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    |||||||||||||||||||| | |||||||   ||||||||||||||||||||||||||||||||||||||   ||||||||||||||| || | |||||    
T  24787042 atcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 24786943  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcacc 265  Q
    | |||||||| ||   |||||| |||||||||||||||    
T  24786942 gccacgatttggcgtcctgcaaactagctcacggcacc 24786905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 380
Target Start/End: Original strand, 13598967 - 13599059
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatt-tcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||||  ||||| |||||||||||||||||||| |||||| |||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattaacaaca-ttctccaccttgacttctaa-ttggtggtgatgtc 13599059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 41398657 - 41398778
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||||||||||||||| ||||||||| |||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| || |||||||    
T  41398657 gaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcacg 41398756  T
Q  261 gcacccgaaatcgtgtcacgat 282  Q
    ||| |  |||||||||||||||    
T  41398757 gcatctcaaatcgtgtcacgat 41398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 24202513 - 24202379
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaac 160  Q
    |||| ||||||||||||| |||| |||||| ||||   || | ||||||||||| ||||| ||  ||||||||||||||||  ||| |||||||||  |     
T  24202513 aaatatgcacaagaacacttaaa-tactagccttcctctgatacaatcgtgtcacgattt-ccagatcgtgtcacgatttgaacgtgcgtcccaagatat 24202416  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagttt 197  Q
    |||||||||||||||||||||||||||||||||||||    
T  24202415 gaccagtccttatcaaggatacttaacgagcaagttt 24202379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 24793723 - 24793666
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 24793666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 47102354 - 47102298
Alignment:
Q  323 aaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  47102354 aaatttgaagtcaatttcaacatttctccaccttgacttctaa-ttggtgatgatgtc 47102298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 43988133 - 43988054
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgc 240  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||    
T  43988133 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattttgc 43988054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 349
Target Start/End: Original strand, 41398764 - 41398826
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttct 349  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| |||  |||||| ||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaaatcaacagttct 41398826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 21536170 - 21536125
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  21536170 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 37070334 - 37070378
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 331  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaa 37070378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 339
Target Start/End: Complemental strand, 26644450 - 26644379
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    ||||||||| |||||  ||||||||| |||||||| | ||||||||||| ||||||||||| ||| ||||||    
T  26644450 aaatcgtgttacgatgacaaaatcgtatcacgattcctctgttcttccaaaccacaaatttaaagccaattt 26644379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 28220796 - 28220850
Alignment:
Q  324 aatttgaagacaattt-caacatttctccaccttgacttctaatttggtgatgatg 378  Q
    ||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  28220796 aatttgaagtcaattttcaacatttctccaccttgacttctaa-ttggtgatgatg 28220850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 3282273 - 3282331
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaaca 344  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||| | ||||||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaaca 3282331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 13659840 - 13659898
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    ||||| |||||||||||| |||||  |||| ||||||||||||||| |||| |||||||    
T  13659840 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaacat 13659898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9036343 - 9036310
Alignment:
Q  1 ctaaaccctagagttgcccctttgattccccaag 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  9036343 ctaaaccctagagttgcccctttgatttcccaag 9036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Complemental strand, 16124238 - 16124197
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 328  Q
    ||||||| |||||||||| ||||||||||| |||||||||||    
T  16124238 aaatcgtatcacgatttctctgttcttccaaaccacaaattt 16124197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 62 - 372
Target Start/End: Original strand, 4025 - 4338
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    ||||||||||||||| |||||| |||  |||||||||||   |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  4025 cttcaaatctgcacaggaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaattgtgtcacgatttgcgtccgtcccaagga 4123  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgca-ctctgcaa-cctagct 256  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  ||||||| ||||| |||||| | |||||| |||||||    
T  4124 acgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga-tttgcacccctgcaaccctagct 4222  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccacctt 356  Q
    |||||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4223 cacggcacctaaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacatttctccacctt 4322  T
Q  357 gacttctaatttggtg 372  Q
     |||||||||||||||    
T  4323 aacttctaatttggtg 4338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 62 - 345
Target Start/End: Complemental strand, 6145 - 5858
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6145 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 6047  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccca-aatcgtgtcacgattttgcactctgcaa-cctagct 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||| |||||| |||||||    
T  6046 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacgaatttgcaccctgcaaccctagct 5947  T
Q  257 cacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    |||||||||   |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5946 cacggcacctccaatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacat 5858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6200 - 6167
Alignment:
Q  1 ctaaaccctagagttgcccctttgattccccaag 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  6200 ctaaaccctagagttgcccctttgatttcccaag 6167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 50 - 344
Target Start/End: Original strand, 2888 - 3185
Alignment:
Q  50 tccaactctccccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgt 146  Q
    |||||||||| ||||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||    
T  2888 tccaactctctccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgt 2986  T
Q  147 ccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgca-ctct 245  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| ||  ||||||| ||||| |||||| | ||    
T  2987 ccgtcccaaggaacgaccagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga-tttgcacccct 3085  T
Q  246 gcaa-cctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3086 gcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 50 - 344
Target Start/End: Original strand, 12647670 - 12647967
Alignment:
Q  50 tccaactctccccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgt 146  Q
    |||||||||| ||||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||    
T  12647670 tccaactctctccttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgt 12647768  T
Q  147 ccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgca-ctct 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||  ||||||| ||||| |||||| | ||    
T  12647769 ccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacga-tttgcacccct 12647867  T
Q  246 gcaa-cctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12647868 gcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 72 - 344
Target Start/End: Complemental strand, 9296137 - 9295862
Alignment:
Q  72 gcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtc 168  Q
    |||||||||||| | ||||||||||||||   ||   ||||||||||| |||||||  | ||||||||||||||||||||| ||||||| | ||||||||    
T  9296137 gcacaagaacactttaaatactagtcttcctctgaagcaatcgtgtcacgattttcaga-tcgtgtcacgatttgcgtccgacccaaggtatgaccagtc 9296039  T
Q  169 cttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cg 267  Q
    |||||||||||||||||| |||||||||||   ||||||||||||||| || | |||||| |||||||| |||  |||||| |||||||||||||||  |    
T  9296038 cttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcaccttg 9295939  T
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9295938 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9295862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 128 - 344
Target Start/End: Original strand, 14291908 - 14292125
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||||||||| |  ||||||| | |||||||||||||||  | |||||||||||||||||||   ||||||||||||||| || | |||||    
T  14291908 atcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 14292007  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||   |||||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  14292008 gccacgatttggcgtcctgcaaactagctcacggcacctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 14292107  T
Q  327 ttgaagacaatttcaaca 344  Q
    |||||| |||| ||||||    
T  14292108 ttgaagccaatatcaaca 14292125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 128 - 344
Target Start/End: Complemental strand, 11098604 - 11098387
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||||||||| |  |||||||   |||||||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||    
T  11098604 atcgtgtcacgatttgcgtacaacccaaggtttgaccagtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgt 11098505  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||   |||||| |||||||||||||||  ||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||    
T  11098504 gccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 11098405  T
Q  327 ttgaagacaatttcaaca 344  Q
    |||||| |||| ||||||    
T  11098404 ttgaagccaatatcaaca 11098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 332
Target Start/End: Complemental strand, 30833209 - 30832934
Alignment:
Q  61 ccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaa 155  Q
    ||||||||||||||||||||||| |||| |||||||||||   || |  |||||||||| ||||| || | ||||||||||||| |  ||| |||| |||    
T  30833209 ccttcaaatctgcacaagaacacttaaa-tactagtcttccactgataaaatcgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaa 30833112  T
Q  156 ggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagc 255  Q
    || |||||| |||||||||  ||| ||||||||||||||||| |  ||||||||||||||| || | ||||||||||||||| |||| |||||| | |||    
T  30833111 ggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagc 30833012  T
Q  256 tcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||||||| | |||||||||||||||||  |||| || |||||||||||| |||||||||||||||||||||||||||    
T  30833011 tcacggcatcacgaaatcgtgtcacgatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaag 30832934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 129 - 332
Target Start/End: Original strand, 25410047 - 25410253
Alignment:
Q  129 tcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcg 226  Q
    ||||||||||||| |  ||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||| |  ||||||||||||||| || | ||||    
T  25410047 tcgtgtcacgattggtacgtacgtcacaaggtacgaccattccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcg 25410146  T
Q  227 tgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    ||||||||||| |||| |||||| | | ||||||||| | | ||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  25410147 tgtcacgatttggcaccctgcaaaccatctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaa 25410246  T
Q  326 tttgaag 332  Q
    |||||||    
T  25410247 tttgaag 25410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 61 - 336
Target Start/End: Complemental strand, 6266562 - 6266283
Alignment:
Q  61 ccttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtcccaa 155  Q
    ||||||||||||||||||||||| |||| |||||| | ||   || |  |||||||||| ||||| ||   |||||||||||||  ||||| ||||||||    
T  6266562 ccttcaaatctgcacaagaacacttaaa-tactagccctccactgataaaatcgtgtcacgattt-ccaggtcgtgtcacgattggtgcgttcgtcccaa 6266465  T
Q  156 ggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagc 255  Q
    | |||||||| ||||||||| ||| |||||||||| ||||||    ||||||||||||||| ||  |||||||||||||||| |||| |||||| | |||    
T  6266464 gaaacgaccattccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagc 6266365  T
Q  256 tcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 336  Q
    |||||||| | |||||| ||||||||||  |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  6266364 tcacggcatcacgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaaatttgaagacaa 6266283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 63 - 332
Target Start/End: Original strand, 4484637 - 4484910
Alignment:
Q  63 ttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaagg 157  Q
    ||||||||||||||||||||| |||| |||||| ||||   || |  |||||||||| ||||| ||  |||||||||||||| |  ||| ||||||||||    
T  4484637 ttcaaatctgcacaagaacacttaaa-tactagccttccactgataaaatcgtgtcacgattt-ccagatcgtgtcacgattggtacgtacgtcccaagg 4484734  T
Q  158 aacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctc 257  Q
     |||||||||||||||||  || |||||||||||||||||    ||||||||||||||     | ||||||||||||||| |||| |||||| |||||||    
T  4484735 tacgaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaactagctc 4484834  T
Q  258 acggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||||| |  |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  4484835 acggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 66 - 332
Target Start/End: Original strand, 3492094 - 3492364
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||||||||   || |  ||| |||||| ||||| || | ||||||||||||| |  ||| |||| ||||| ||    
T  3492094 aaatctgcacaagaacacttaaa-tactagtcttccactgataaaattgtgtcacgattt-ccaagtcgtgtcacgattggtacgtacgtcacaaggtac 3492191  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||| |||||||||  ||| |||||||||||||||||||  ||||||||||||||| || | ||||||||||||||| |||| |||||| | ||||||||    
T  3492192 gacctgtccttatcctggaaacttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 3492291  T
Q  261 gca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||| | | ||||||||||||||| ||||| ||||||||| ||||| |||||||| ||||||||||||||||||    
T  3492292 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaag 3492364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 129 - 332
Target Start/End: Complemental strand, 32289367 - 32289161
Alignment:
Q  129 tcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcg 226  Q
    ||||||||||||| |  ||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||   | | ||||    
T  32289367 tcgtgtcacgattggagcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcg 32289268  T
Q  227 tgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    ||||| ||||| |||| |||||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  32289267 tgtcaagatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaa 32289168  T
Q  326 tttgaag 332  Q
    |||||||    
T  32289167 tttgaag 32289161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 128 - 344
Target Start/End: Complemental strand, 39811693 - 39811477
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||| |||  | | ||||||| | ||| |||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||    
T  39811693 atcgtgtcacgatctgcaacggccccaaggca-gacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgt 39811595  T
Q  228 gtcacgattttgcactctgcaacctagctcacgg-cacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||   |||||| || ||| |||| |||  |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  39811594 gccacgatttggcgtcctgcaaacttgcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 39811495  T
Q  327 ttgaagacaatttcaaca 344  Q
    |||||| |||| ||||||    
T  39811494 ttgaagccaatatcaaca 39811477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 161 - 380
Target Start/End: Original strand, 19344825 - 19345046
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| || ||||||||   | |||| || | |||||    
T  19344825 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttggctcac 19344924  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt-caacatttctccaccttga 358  Q
    |||| |    ||||| |||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||    
T  19344925 ggcatctccgatcgtatcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaacatttctccaccttga 19345024  T
Q  359 cttctaatttggtgatgatgtc 380  Q
    |||||||||||||| |||||||    
T  19345025 cttctaatttggtggtgatgtc 19345046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 107 - 332
Target Start/End: Original strand, 40739217 - 40739444
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 204  Q
    |||||||||| ||||| || |||||||||||||||  | ||| |||| ||||| |||||| |||||||||  | | ||||||||||||||||| |  ||     
T  40739217 aatcgtgtcacgattt-ccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaatt 40739315  T
Q  205 gtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgattt 303  Q
    ||||||| |||   | | ||||||||||||||| |||| |||||| | |||||||||||   | ||||||||||||||| ||||| ||||||||||||||    
T  40739316 gtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgattt 40739415  T
Q  304 ccctgttcttccagaccacaaatttgaag 332  Q
      |||||||||||||||||||||||||||    
T  40739416 gtctgttcttccagaccacaaatttgaag 40739444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 222 - 344
Target Start/End: Original strand, 32247229 - 32247352
Alignment:
Q  222 aatcgtgtcacgattttgcactctgcaacctag-ctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagacc 320  Q
    ||||||| ||||||||||||  | |||| || | ||||||||| |  ||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  32247229 aatcgtgccacgattttgcatccagcaaacttggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagacc 32247328  T
Q  321 acaaatttgaagacaatttcaaca 344  Q
    |||||||||||| |||| ||||||    
T  32247329 acaaatttgaagccaatatcaaca 32247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 345
Target Start/End: Complemental strand, 44310548 - 44310470
Alignment:
Q  267 gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  44310548 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacat 44310470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 380
Target Start/End: Original strand, 39483443 - 39483535
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat-ttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||   ||||| |||||||||||||||||||| |||||| |||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaataaacaaca-ttctccaccttgacttctaa-ttggtggtgatgtc 39483535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 14634383 - 14634438
Alignment:
Q  324 aatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  14634383 aatttaaagacaatttcaacatttctccaccttgacttctaa-ttggcgatgatgtc 14634438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 331
Target Start/End: Original strand, 19349683 - 19349854
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| | ||||||||   ||||||||||||||| || | |||||| |||||||||||   | || ||| | ||||||    
T  19349683 gaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcac 19349782  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 331  Q
    |||| |    |||||||||||||  | |||| | | ||||||| | ||||||||||| ||||||||||||||    
T  19349783 ggcatctccgatcgtgtcacgattgccaaattgcgacacgattcctctgttcttccaaaccacaaatttgaa 19349854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 8389681 - 8389631
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8389631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 36757477 - 36757423
Alignment:
Q  285 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaattt 36757423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 344
Target Start/End: Complemental strand, 28258729 - 28258669
Alignment:
Q  285 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaaca 344  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||| | ||||||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaaca 28258669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 33528155 - 33528104
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatt 338  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 33528104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 10706783 - 10706733
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| || |||||||||||| ||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 10706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 21630511 - 21630561
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| || |||||||||||| ||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaat 21630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 338
Target Start/End: Original strand, 20522794 - 20522839
Alignment:
Q  293 tgtcacgatttccctgttcttccagaccacaaatttgaagacaatt 338  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 20522839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 2334769 - 2334803
Alignment:
Q  202 atcgtgtcacgattttcccaaatcgtgtcacgatt 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  2334769 atcgtgtcacgtttttcccaaatcgtgtcacgatt 2334803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 23078002 - 23077952
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
    |||||||||||||||||| ||||||||||| |||| || ||||||| ||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaat 23077952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 263
Target Start/End: Complemental strand, 28258877 - 28258733
Alignment:
Q  120 ttttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttt 217  Q
    |||||| ||||||| |||||||  ||||| || ||||||| |||||||  |||||||  | | ||||||| ||||||||| |  |||||||||||||||     
T  28258877 ttttccaaatcgtgccacgattgatgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttc 28258779  T
Q  218 cccaaatcgtgtcacgattttgcactctgcaacctagctcacggca 263  Q
     | |||| ||| ||||||||  ||| |||||| | |||||||||||    
T  28258778 acaaaattgtgccacgatttgacaccctgcaaaccagctcacggca 28258733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 32247189 - 32247245
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttt 217  Q
    |||||||| ||||||  |||||||||||||||||||||   |||||| |||||||||    
T  32247189 gaccagtctttatcagtgatacttaacgagcaagtttctgaatcgtgccacgatttt 32247245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 181; Significance: 1e-97; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 62 - 347
Target Start/End: Complemental strand, 3439371 - 3439085
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| | |  |||||||||||   ||||  |||||||||| |||||||||||||||| |||||| ||||| |  |||||| |    
T  3439371 cttcaaatctgcacaagaacacttta--tactagtcttcctctgttgaaatcgtgtcacgattttcccaatcgtgccacgatatgcgtaccacccaagaa 3439274  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctca 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  3439273 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccaaatcgtgtcacgattttgcaccctgcaacctagctca 3439175  T
Q  259 cggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacattt 347  Q
    ||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  3439174 cggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaatctcaacattt 3439085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 62 - 345
Target Start/End: Original strand, 42575623 - 42575910
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||||||||||||||||| |||  |||||||||||   |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  42575623 cttcaaatctgcacaagaacacttaag-tactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaagga 42575721  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaatcgtgtcacgattttgca-ctctgcaa-cctagc 255  Q
    | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| ||||| |||||| | |||||| |||| |    
T  42575722 aagaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacga-tttgcacccctgcaaccctaac 42575820  T
Q  256 tcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  42575821 tcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacat 42575910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 126 - 380
Target Start/End: Complemental strand, 33037506 - 33037251
Alignment:
Q  126 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatc 225  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||  ||||||||| |||||||||||   ||||||||||||||| || | |||    
T  33037506 caatcgtgtcacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatc 33037407  T
Q  226 gtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaa 324  Q
    |||||||||||| ||   |||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  33037406 gtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaa 33037307  T
Q  325 atttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  33037306 atttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgatgtc 33037251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 125 - 344
Target Start/End: Complemental strand, 15290364 - 15290143
Alignment:
Q  125 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaa 223  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||    
T  15290364 ccaatcgtgtcacgatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaa 15290265  T
Q  224 tcgtgtcacgattttgca-ctctgcaa-cctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagacca 321  Q
    ||||||||||| |||||| | |||||| |||| ||||||||| ||||||||||||| | || ||||||||||||||||||||||||||||||||| ||||    
T  15290264 tcgtgtcacga-tttgcacccctgcaaccctaactcacggcatccgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaacca 15290166  T
Q  322 caaatttgaagacaatttcaaca 344  Q
    |||||||||||||||| ||||||    
T  15290165 caaatttgaagacaatctcaaca 15290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 125 - 344
Target Start/End: Complemental strand, 15470733 - 15470512
Alignment:
Q  125 ccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc-aaa 223  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||    
T  15470733 ccaatcgtgtcacgatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaa 15470634  T
Q  224 tcgtgtcacgattttgca-ctctgcaa-cctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagacca 321  Q
    ||||||||||| |||||| | |||||| |||| ||||||||| ||||||||||||| | || ||||||||||||||||||||||||||||||||| ||||    
T  15470633 tcgtgtcacga-tttgcacccctgcaaccctaactcacggcatccgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaacca 15470535  T
Q  322 caaatttgaagacaatttcaaca 344  Q
    |||||||||||||||| ||||||    
T  15470534 caaatttgaagacaatctcaaca 15470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 107 - 344
Target Start/End: Complemental strand, 4759771 - 4759534
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgt 206  Q
    |||||||||| ||||| ||  ||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||   |||||    
T  4759771 aatcgtgtcacgattt-ccagatcgtgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgt 4759673  T
Q  207 gtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttcc 305  Q
    |||||||||| || | |||||| |||||||| ||   |||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||     
T  4759672 gtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttct 4759573  T
Q  306 ctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  4759572 ctgttcttccagaccacaaatttgaagccaatatcaaca 4759534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 106 - 375
Target Start/End: Complemental strand, 18870259 - 18869990
Alignment:
Q  106 caatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    |||||||| || |||||||  |||||||||||||| |||||| | ||||||| | ||||||||||||| |  |||||||||||||||||||||   ||||    
T  18870259 caatcgtgccacgattttca-aatcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctgaatcg 18870161  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | |||||| |||||||| ||   |||||| |||||||||| || |  |||||||||||||||| |||||||||||||||||||||    
T  18870160 tgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 18870061  T
Q  305 cctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatg 375  Q
     ||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  18870060 tctgttcttccagaccacaaatttgaagccaatatcaacatttctccacattgacttctaatttggtgatg 18869990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 62 - 282
Target Start/End: Complemental strand, 25689826 - 25689604
Alignment:
Q  62 cttcaaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttgcgtccgtcccaagga 158  Q
    |||||||  ||||||||||||| |||| |||||| ||||   |||| ||||||||||| ||||||| |||||||||||||||||| || |   |||||||    
T  25689826 cttcaaagatgcacaagaacacttaaa-tactagccttcctctgttgcaatcgtgtcacgattttctcaatcgtgtcacgatttgtgtacaaaccaagga 25689728  T
Q  159 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctca 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||| ||||||||||||| |||||||||||||||    
T  25689727 acgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgcaacctagctca 25689628  T
Q  259 cggcacccgaaatcgtgtcacgat 282  Q
    ||||||||||||||||||||||||    
T  25689627 cggcacccgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 128 - 344
Target Start/End: Original strand, 30656065 - 30656282
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    |||||||||||||||||||| | |||||||   ||||||||||||||||||||||||||||||||||||||   ||||||||||||||| || | |||||    
T  30656065 atcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 30656164  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||   |||||| |||||||||||||||  |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  30656165 gccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 30656264  T
Q  327 ttgaagacaatttcaaca 344  Q
    |||||| |||| ||||||    
T  30656265 ttgaagccaatatcaaca 30656282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 128 - 344
Target Start/End: Original strand, 36979797 - 36980014
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||||||||| |  ||||||| | |||||||||||||||  |||||||||||||||||||||   |||||||||||||||||| | |||||    
T  36979797 atcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgt 36979896  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||   |||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  36979897 gccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 36979996  T
Q  327 ttgaagacaatttcaaca 344  Q
    |||||| |||| ||||||    
T  36979997 ttgaagccaatatcaaca 36980014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 121 - 344
Target Start/End: Complemental strand, 18852851 - 18852627
Alignment:
Q  121 tttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttccc 220  Q
    ||||| |||||||||||||| |||||| | ||||||| | |||||||||||||||  |||||||||||||||||||||   ||||||||||||||| ||     
T  18852851 tttccaaatcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca 18852752  T
Q  221 aaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 319  Q
    | |||||| |||||||| ||   |||||| |||||||||||||||  |||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  18852751 agatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagac 18852652  T
Q  320 cacaaatttgaagacaatttcaaca 344  Q
    ||||||||||||| |||| ||||||    
T  18852651 cacaaatttgaagccaatatcaaca 18852627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 107 - 331
Target Start/End: Complemental strand, 1261654 - 1261428
Alignment:
Q  107 aatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatc 204  Q
    |||||||||| ||||| ||  ||||||||||||||||  |||  ||||||||| | ||||||||||||||||||||||||||||||||||||| |  |||    
T  1261654 aatcgtgtcacgattt-ccagatcgtgtcacgatttgaacgtatgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatc 1261556  T
Q  205 gtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgattt 303  Q
    |||||||||||| || | ||||||||||||||| |||| |||||| ||||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||    
T  1261555 gtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcgcgattt 1261456  T
Q  304 ccctgttcttccagaccacaaatttgaa 331  Q
    |  |||||||||| ||||||||||||||    
T  1261455 ctgtgttcttccaaaccacaaatttgaa 1261428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 128 - 344
Target Start/End: Complemental strand, 7289644 - 7289427
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||||||| || |  |||||| | ||| ||||||||||| ||||||||||||||||||||||   |||||||||||||||||| | |||||    
T  7289644 atcgtgtcacgatttgcatctgatccaaggta-gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgt 7289546  T
Q  228 gtcacgattttgcactctgcaacctagctcacggcaccc--gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    |||||||||| ||   |||||| |||||||| ||| |||  |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  7289545 gtcacgatttggcgtcctgcaaactagctcatggctcccttgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaa 7289446  T
Q  326 tttgaagacaatttcaaca 344  Q
    ||||||| |||| ||||||    
T  7289445 tttgaagtcaatatcaaca 7289427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 10683923 - 10683739
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    |||||||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||||| ||   |||||| ||||||||||    
T  10683923 gaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacg 10683824  T
Q  261 gcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  10683823 gcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10683739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 142 - 332
Target Start/End: Complemental strand, 2627522 - 2627331
Alignment:
Q  142 tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgca 241  Q
    ||||| |||| |||| |||||||| ||||||||| ||| |||||||||||||||||    ||||||||||||||| || ||||||||||||||||| |||    
T  2627522 tgcgtacgtcacaagaaacgaccaatccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggca 2627423  T
Q  242 ctctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |  ||||| | ||||||||| | | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2627422 ccatgcaaaccagctcacggaatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaag 2627331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 126 - 337
Target Start/End: Original strand, 6311717 - 6311928
Alignment:
Q  126 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatc 225  Q
    ||||||||||||||||||| || | |||||||   ||| ||||||||| |  |||||||||||||||||||||   ||||||||||||||| || | |||    
T  6311717 caatcgtgtcacgatttgcatctgacccaaggtt-gacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 6311815  T
Q  226 gtgtcacgattttgcactctgcaacctagctcacggcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaa 324  Q
    ||| |||||||| ||   |||||| |||||||||||||||  |||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||    
T  6311816 gtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagaccacaa 6311915  T
Q  325 atttgaagacaat 337  Q
    |||||||| ||||    
T  6311916 atttgaagccaat 6311928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 148 - 332
Target Start/End: Original strand, 26288319 - 26288504
Alignment:
Q  148 cgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc 247  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||||||||||| |  || |||||||||||| || | || |||||||||||| |||| ||||    
T  26288319 cgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgc 26288418  T
Q  248 aacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    || | ||||||||||| | | ||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  26288419 aaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 148 - 332
Target Start/End: Original strand, 26301576 - 26301761
Alignment:
Q  148 cgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc 247  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||||||||||| |  || |||||||||||| || | || |||||||||||| |||| ||||    
T  26301576 cgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgc 26301675  T
Q  248 aacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    || | ||||||||||| | | ||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  26301676 aaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 148 - 332
Target Start/End: Original strand, 26313570 - 26313755
Alignment:
Q  148 cgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc 247  Q
    |||| ||||| ||||||||||||||||| ||| ||||||||||||||||| |  || |||||||||||| || | || |||||||||||| |||| ||||    
T  26313570 cgtcacaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgc 26313669  T
Q  248 aacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    || | ||||||||||| | | ||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  26313670 aaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 39784509 - 39784325
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| | ||||||||   ||||||||||||||| || | |||||| ||||||||||||  | |||| || | |||||    
T  39784509 gaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 39784410  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||   |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  39784409 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 39784325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 126 - 380
Target Start/End: Complemental strand, 10688817 - 10688582
Alignment:
Q  126 caatcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatc 225  Q
    ||||||||||||||||||| || | |||||||   ||| ||||||||| |  |||||||||||||||||||||   ||||||||||||||| || | |||    
T  10688817 caatcgtgtcacgatttgcatctgacccaaggtt-gacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 10688719  T
Q  226 gtgtcacgattttgcactctgcaacctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaa 325  Q
    ||| |||||||| ||   |||||| |||||||||||||||        ||           |||||||||||||||||| ||||||||||||||||||||    
T  10688718 gtgccacgatttggcgtcctgcaaactagctcacggcacct-------tg-----------aaatcgtgtcacgatttctctgttcttccagaccacaaa 10688637  T
Q  326 tttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  10688636 tttgaagccaatatcaacatttctccaccttgacttctaatttggtggtgatgtc 10688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 165 - 344
Target Start/End: Complemental strand, 25327844 - 25327664
Alignment:
Q  165 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggc-a 263  Q
    |||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||| || ||||| ||   |||||| ||||||||| || |    
T  25327844 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaaactagctcacagcca 25327745  T
Q  264 cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |  ||||||||| |||||  ||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  25327744 cttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 25327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 222 - 332
Target Start/End: Complemental strand, 31043032 - 31042921
Alignment:
Q  222 aatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagacc 320  Q
    |||||||||||||||| |||| |||||| | ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||||||    
T  31043032 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagacc 31042933  T
Q  321 acaaatttgaag 332  Q
    ||||||||||||    
T  31042932 acaaatttgaag 31042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 7412787 - 7412952
Alignment:
Q  181 acttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacccga-aatcgtgtcac 279  Q
    ||||||| ||||||||| |  |||||||||||||||  | |||| ||  ||||||||  ||| |||||| | |||||||||||    | |||||||||||    
T  7412787 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggcattacagaatcgtgtcac 7412886  T
Q  280 gataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaaca 344  Q
    ||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  7412887 gatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 25689618 - 25689561
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaatctcaaca 25689561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 339
Target Start/End: Original strand, 35745794 - 35745973
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   |  | ||| | ||||||    
T  35745794 gaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctcac 35745893  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    |||| |    |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||||||    
T  35745894 ggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattt 35745973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 5702009 - 5701958
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatt 338  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 5701958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 380
Target Start/End: Complemental strand, 19751909 - 19751853
Alignment:
Q  323 aaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  19751909 aaatttgaagtcaattacaacatttctccaccttgacttctaa-ttggtgacgatgtc 19751853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 4456575 - 4456620
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaag 4456620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 346 - 380
Target Start/End: Original strand, 35741124 - 35741158
Alignment:
Q  346 ttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||||||||||||||||||||||| |||||||    
T  35741124 ttctccaccttgacttctaatttggtggtgatgtc 35741158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 23799149 - 23799105
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 331  Q
    ||||||||| |||||||| |||||||| || ||||||||||||||    
T  23799149 aaatcgtgttacgatttctctgttctttcaaaccacaaatttgaa 23799105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 127 - 380
Target Start/End: Original strand, 9088 - 9344
Alignment:
Q  127 aatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    |||||||||||||||  ||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||||||    
T  9088 aatcgtgtcacgattggtgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccaaat 9186  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
    | ||||||||||| |||| |||||| | ||||||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  9187 catgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccaca 9286  T
Q  324 aatttgaagac-aatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||| || |||||||    
T  9287 aatttgaagccaaatctcaacatttctccaccttgacttctaatttgatggtgatgtc 9344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 66 - 332
Target Start/End: Original strand, 11471 - 11740
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||| ||||   || |  |||||||||| ||||| ||  ||||||||||||||  ||||| |||||||||| ||    
T  11471 aaatctgcacaagaacacttaaa-tactagccttccactgataaaatcgtgtcacgattt-ccagatcgtgtcacgattggtgcgtacgtcccaaggtac 11568  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||| |||||||||||||||||||| |||| |||||| | ||||||||    
T  11569 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt-cccaaatcgtgtcacgatttggcaccctgcaaaccagctcacg 11667  T
Q  261 gcaccc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||| |  |||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  11668 gcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaag 11740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 127 - 332
Target Start/End: Complemental strand, 17652 - 17444
Alignment:
Q  127 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    ||||||||||||||| |  ||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||| |  ||| ||||||||||| || | ||    
T  17652 aatcgtgtcacgattggaacgtacgtcacaaggtacgaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagat 17553  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggca-cccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
    ||||||||||||| |||| |||||| | ||||||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  17552 cgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccaca 17453  T
Q  324 aatttgaag 332  Q
    |||||||||    
T  17452 aatttgaag 17444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 127 - 331
Target Start/End: Complemental strand, 22160 - 21953
Alignment:
Q  127 aatcgtgtcacgatttg--cgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaat 224  Q
    ||||||||||||||| |  ||| |||| ||||| |||||| ||||||||||  |||||||||||||||||||| || ||||||||||||||| || | ||    
T  22160 aatcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagat 22061  T
Q  225 cgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccaca 323  Q
    ||||||||||||| ||   |||||| ||||||||||||||| ||||||||||||||||| ||||| || |||| ||||||| ||||||||||||||||||    
T  22060 cgtgtcacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccaca 21961  T
Q  324 aatttgaa 331  Q
    ||||||||    
T  21960 aatttgaa 21953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 761 - 945
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| ||||||||||||  | |||| || | |||||    
T  761 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctcac 860  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    ||||||   |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  861 ggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaatttcaaca 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 107 - 344
Target Start/End: Complemental strand, 3575 - 3337
Alignment:
Q  107 aatcgtgtcatgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    |||||||||| |||||||| | ||||||||||||| |||  | ||||| |||   ||| |||||||||||  |||||||||||||||||||||   ||||    
T  3575 aatcgtgtcacgattttcctagatcgtgtcacgatctgcaacggtccccaggtt-gactagtccttatcattgatacttaacgagcaagtttctgaatcg 3477  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacggc-acccgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | |||||| |||||||| ||   || ||| |||||||||||| ||  ||||||||||||||||  ||||||||||||||||||||    
T  3476 tgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaactagctcacggccacttgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttc 3377  T
Q  305 cctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
     || |||||||||||||||||||||||| |||| ||||||    
T  3376 tcttttcttccagaccacaaatttgaagccaatatcaaca 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 161 - 380
Target Start/End: Complemental strand, 13968 - 13748
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacct-agctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | |||| || |||||||    
T  13968 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 13869  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgac 359  Q
     ||  ||   ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| ||||||||| ||||| ||||||||||||||||||||    
T  13868 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaattccaacatttctccaccttgac 13769  T
Q  360 ttctaatttggtgatgatgtc 380  Q
    ||||||||||||| |||||||    
T  13768 ttctaatttggtggtgatgtc 13748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 128 - 380
Target Start/End: Complemental strand, 18880 - 18627
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    |||||||||||||||||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||    
T  18880 atcgtgtcacgatttgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgt 18782  T
Q  228 gtcacgattttgcactctgcaacct-agctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||||||   | |||| || ||||||| ||  |    |||||||||||||  | |||||| | ||||||| | ||||||| ||| |||||||||    
T  18781 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttctcccaaaccacaaat 18682  T
Q  327 ttgaagacaattt-caacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  18681 ttgaagccaattttcaacatttctccaccttgacttctaatttggtggtgatgtc 18627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 380
Target Start/End: Complemental strand, 1977 - 1703
Alignment:
Q  107 aatcgtgtcatgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    |||||||||| ||||| || | ||||||||||||| |||  | |||||||||   |||||||||||||||  || ||||||| ||||||||||   ||||    
T  1977 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggtt-gaccagtccttatcagagaaacttaaccagcaagtttctgaatcg 1879  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctag-ctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | |||||| |||||||||||   | |||| || | ||||| ||  ||   |||||||||||||  | |||||||| ||||||| |    
T  1878 tgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcc 1779  T
Q  305 cctgttcttccagaccacaaatttgaagacaatttcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
     ||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  1778 tctgttcttccaaaccactaatttgaagtcaattccaacatttctccaccttgacttctaatttggtggtgatgtc 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 66 - 304
Target Start/End: Complemental strand, 765 - 523
Alignment:
Q  66 aaatctgcacaagaacacataaaatactagtcttc---tgttccaatcgtgtcatgattttcccaatcgtgtcacgatttg--cgtccgtcccaaggaac 160  Q
    |||||||||||||||||| |||| |||||||||||   || |  |||||||||| ||||| || ||||||||||| ||| |  ||| |||| ||||| ||    
T  765 aaatctgcacaagaacacttaaa-tactagtcttccactgataaaatcgtgtcacgattt-ccaaatcgtgtcacaattggtacgtacgtcacaaggtac 668  T
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacg 260  Q
    ||||||||| ||||  ||| ||||||||||||| ||| |  ||||||||||||||   | | ||||||||||||||| |||| |||||| ||||||||||    
T  667 gaccagtccctatcctggaaacttaacgagcaaatttgaaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacg 568  T
Q  261 gcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||| | ||||||||||||||||| ||||| |||||||||||||||    
T  567 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttc 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 128 - 344
Target Start/End: Complemental strand, 34770 - 34554
Alignment:
Q  128 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 227  Q
    ||||||||||||| |||  | | ||||||| | ||| |||||||||||  |||||||||||||||||||||   ||||||||||||||| || | |||||    
T  34770 atcgtgtcacgatctgcaacggacccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 34672  T
Q  228 gtcacgattttgcactctgcaacctagctcacggc-acccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 326  Q
    | |||||||| ||    ||||| | | || ||||| ||  ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  34671 gccacgatttggcgtcatgcaaacaaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 34572  T
Q  327 ttgaagacaatttcaaca 344  Q
    |||||| |||| ||||||    
T  34571 ttgaagccaatatcaaca 34554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 120 - 348
Target Start/End: Complemental strand, 132979 - 132748
Alignment:
Q  120 ttttcccaatcgtgtcacgatt--tgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttt 217  Q
    |||||| |||||||||||||||  | ||| || ||||||| |||||||  |||||||  | | ||||||| ||||||||| |  ||| ||||||||||      
T  132979 ttttccaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattcc 132881  T
Q  218 cccaaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttcca 316  Q
     | |||||||||||||||||  ||| |||||| | |||||||| || | | |||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  132880 acaaaatcgtgtcacgatttgacacactgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttcca 132781  T
Q  317 gaccacaaatttgaagac-aatttcaacatttc 348  Q
     ||||||||||||||||| ||| ||||||||||    
T  132780 aaccacaaatttgaagacaaatctcaacatttc 132748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 380
Target Start/End: Original strand, 6252 - 6344
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatt-tcaacatttctccaccttgacttctaatttggtgatgatgtc 380  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||||  ||||| |||||||||||||||||||| |||||| |||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattaacaaca-ttctccaccttgacttctaa-ttggtggtgatgtc 6344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 3060 - 3111
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatt 338  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||| |||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaatt 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 149601 - 149659
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
    ||||| |||||||||||| |||||  |||| ||||||||||||||| |||| |||||||    
T  149601 aaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaacat 149659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 1784 - 1709
Alignment:
Q  269 aatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 221 - 332
Target Start/End: Complemental strand, 8036 - 7924
Alignment:
Q  221 aaatcgtgtcacgattttgcactctgcaacctagctcacggcacc-cgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagac 319  Q
    ||||||||||||||||| |||| |||||| | | ||||||||| | | ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||    
T  8036 aaatcgtgtcacgatttggcaccctgcaaaccaactcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagac 7937  T
Q  320 cacaaatttgaag 332  Q
    |||||||||||||    
T  7936 cacaaatttgaag 7924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 8112 - 8230
Alignment:
Q  165 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgcaacctagctcacgg-ca 263  Q
    |||||||||||  |||||||||||||||||||||   |||||||||||||||||| | |||||| |||||||| ||   |||||| ||||||||||| ||    
T  8112 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcca 8211  T
Q  264 cccgaaatcgtgtcacgat 282  Q
    |  ||||||||||||||||    
T  8212 cttgaaatcgtgtcacgat 8230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 8216 - 8273
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatttcaaca 344  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 107 - 345
Target Start/End: Complemental strand, 148682 - 148443
Alignment:
Q  107 aatcgtgtcatgattttccca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcg 205  Q
    |||||||||| ||||| || | ||||||||||||| |||  | |||||||||   |||||||||||||||  || ||||||| ||||||||||   ||||    
T  148682 aatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggtt-gaccagtccttatcagagaaacttaaccagcaagtttctgaatcg 148584  T
Q  206 tgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcacggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttc 304  Q
    ||||||||||| || | |||||| |||||||||||   | || ||| | |||||| ||  ||   |||||||||||||  | |||||||| ||||||| |    
T  148583 tgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcc 148484  T
Q  305 cctgttcttccagaccacaaatttgaagacaatttcaacat 345  Q
     ||||||||||| ||||| ||||||||| ||||| ||||||    
T  148483 tctgttcttccaaaccactaatttgaagtcaattccaacat 148443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 345
Target Start/End: Complemental strand, 1160 - 1082
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatttcaacat 345  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||| || ||||||||||||||| | |||||||||||    
T  1160 aaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaacat 1082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 337
Target Start/End: Complemental strand, 176634 - 176457
Alignment:
Q  161 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgattttgcactctgc-aacctagctcac 259  Q
    |||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| || | |||||| |||||||||||   | || ||| ||||||||    
T  176634 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctcac 176535  T
Q  260 ggcacccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 337  Q
     ||  ||   ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| ||||||||| ||||    
T  176534 tgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaagtcaat 176457  T

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Target: scaffold0087 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 43511 - 43447
Alignment:
Q  268 aaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    ||||||||||||||| ||| ||||||||||||||||| || |||||||| |||| ||||||||||    
T  43511 aaatcgtgtcacgatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaag 43447  T

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Target: scaffold0087; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 36384 - 36330
Alignment:
Q  285 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaattt 339  Q
    ||||||||| ||| |||||| ||||||||||| ||||||||||||||| ||||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaattt 36330  T

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Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 332
Target Start/End: Original strand, 45744 - 45791
Alignment:
Q  285 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 332  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaag 45791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 25283 - 25245
Alignment:
Q  202 atcgtgtcacgattttcccaaatcgtgtcacgattttgc 240  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  25283 atcgtgccacgatttgcccaaatcgtgtcacgattttgc 25245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 86153 - 86225
Alignment:
Q  287 aaatcgtgtcacgatttccctgttcttccagaccac-aaatttgaagacaat-ttcaacatttctccaccttga 358  Q
    |||||||||||||||||| || |||||||| ||||| |||||||||| |||| | ||||| |||||||||||||    
T  86153 aaatcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaatatacaaca-ttctccaccttga 86225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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